TCONS_00072006 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072006
Unique NameTCONS_00072006
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length160

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072006 ID=TCONS_00072006|Name=TCONS_00072006|organism=Clytia hemisphaerica|type=transcript|length=160bp
aaaatcaggcCCGACCCCTCCAGGAAGGGATGTTCTTTGGACTTTTCAAT
CAATAATTATAATGACGAATAGGTATGTTTATTAATTAAATGCAAAACTG
gcttgtaaattttcaaacaaaagctACGAGAAATCTATCCTCgaatataa
cacccctgtc
Run BLAST on NCBI

transcript from alignment at scaffold_66:173422..173581

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072006 ID=TCONS_00072006|Name=TCONS_00072006|organism=Clytia hemisphaerica|type=transcript|length=160bp|location=Sequence derived from alignment at scaffold_66:173422..173581 (Clytia hemisphaerica)
gacaggggtgttatattcGAGGATAGATTTCTCGTagcttttgtttgaaa
atttacaagcCAGTTTTGCATTTAATTAATAAACATACCTATTCGTCATT
ATAATTATTGATTGAAAAGTCCAAAGAACATCCCTTCCTGGAGGGGTCGG
gcctgatttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044706XLOC_044706Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072006-exon-scaffold_66-1491911889:173422..173581TCONS_00072006-exon-scaffold_66-1491911889:173422..173581Clytia hemisphaericaexon
TCONS_00072006-exon-scaffold_66-1510915933:173422..173581TCONS_00072006-exon-scaffold_66-1510915933:173422..173581Clytia hemisphaericaexon
TCONS_00072006-exon-scaffold_66-1575043694:173422..173581TCONS_00072006-exon-scaffold_66-1575043694:173422..173581Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_66supercontigscaffold_66:173422..173581 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072006 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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