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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071988 ID=TCONS_00071988|Name=TCONS_00071988|organism=Clytia hemisphaerica|type=transcript|length=740bp
AGATTCAACAGTAAAAAAACCATCATCACTTATCGGCGATAAAAGGACAA
AcgattttcaaacaattttttagtTCTCAAAAAGACAAGGAAAATGCCAC
ACGTCGCGGAAGGGCAAACGCTAAAATTATCAGGGACCATCTATGAGAAT
ATCACTATGGGTTCACATTCGACACTCATTTTGGAAAATGCTACAACCAA
AGGAGACATCATTGGagataaaacaacaacaatcaCAATGAAAGGGAGTT
GCACCATTGGTGGGAACGTCACTGGTGGTACAGTCAACATTGGATGAGAT
CAATTTCtacatttttaataaaaaataaaaacttataTTATTGCACTTNa
gaaaattttgagaaaatttgcaAGTTTTAGTTCCATTCTGGATCACTTTT
TGCGAAAAAATGAGTcacacgtagggtccatttttcgaagtTCAGCGGCA
caccccgtcggtcggcaagggtagtattGTCCCCCCGGTTTATTTTCATC
AAGAATAATTTCATCGAGGGTGAAGAGATACAGAAAAGATTGAAGGATGA
AATAAACTTTTCTAATAACACGTTTTCAGACTTATAAATactttttcaat
gtttattatttgaaaaatttattggTAAAATAAAATTCAGTAAACAAATC
ACTAAAACTAAATTTCGGTCCTTTCCGTCAGCGCGTGTCGAGTTATGACG
CCCAAAAAAATGAGACTAAAAGGTTTAAATACTTtagaaa Run BLAST on NCBI transcript from alignment at scaffold_66:24803..25935- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071988 ID=TCONS_00071988|Name=TCONS_00071988|organism=Clytia hemisphaerica|type=transcript|length=1133bp|location=Sequence derived from alignment at scaffold_66:24803..25935- (Clytia hemisphaerica)
AGATTCAACAGTAAAAAAACCATCATCACTTATCGGCGATAAAAGGACAA
ACGATTTTCAAACAATTTTTTAGTTCTCAAAAAGACAAGGAAGTAAACTT
TGTTATTTTTTAATGATTGATTTTCAGGATTTTTTTCTTTAGTCACTTTC
ACTAAAAAAGGAATCTAAAATTACCCAGGGTGGTCAATTGACGAGGCTTC
TTCTTGCGGGAATAAGTTTGAGAAACCGGACTGTATCTTGTAGGGGGTCT
ATCATAATTAGAAGTACAGTGGACTTTGACTAAATCGGGCTNTCCCTCGA
GGAATTCCTAAAAGATTTCTATTGTAATACTCCCGAAACAATCCCACAAT
GCATCGCTTTTTTAGAAAAATCAAAAATTCCGATAAGATCTATTATAGAA
AGATTCGGATAATAGAAGTTCGAATAAGCGAGAGAACATCCACTGTAGAA
CCTTAAAAATTATATATATCACCCTCATTTTCCAGAATGCCACACGTCGC
GGAAGGGCAAACGCTAAAATTATCAGGGACCATCTATGAGAATATCACTA
TGGGTTCACATTCGACACTCATTTTGGAAAATGCTACAACCAAAGGAGAC
ATCATTGGAGATAAAACAACAACAATCACAATGAAAGGGAGTTGCACCAT
TGGTGGGAACGTCACTGGTGGTACAGTCAACATTGGATGAGATCAATTTC
TACATTTTTAATAAAAAATAAAAACTTATATTATTGCACTTNAGAAAATT
TTGAGAAAATTTGCAAGTTTTAGTTCCATTCTGGATCACTTTTTGCGAAA
AAATGAGTCACACGTAGGGTCCATTTTTCGAAGTTCAGCGGCACACCCCG
TCGGTCGGCAAGGGTAGTATTGTCCCCCCGGTTTATTTTCATCAAGAATA
ATTTCATCGAGGGTGAAGAGATACAGAAAAGATTGAAGGATGAAATAAAC
TTTTCTAATAACACGTTTTCAGACTTATAAATACTTTTTCAATGTTTATT
ATTTGAAAAATTTATTGGTAAAATAAAATTCAGTAAACAAATCACTAAAA
CTAAATTTCGGTCCTTTCCGTCAGCGCGTGTCGAGTTATGACGCCCAAAA
AAATGAGACTAAAAGGTTTAAATACTTTAGAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00071988-exon-scaffold_66-1575043694:25844..25935 | TCONS_00071988-exon-scaffold_66-1575043694:25844..25935 | Clytia hemisphaerica | exon |
| TCONS_00071988-exon-scaffold_66-1575043694:24803..25450 | TCONS_00071988-exon-scaffold_66-1575043694:24803..25450 | Clytia hemisphaerica | exon |
| TCONS_00071988-exon-scaffold_66-1510915933:25844..25935 | TCONS_00071988-exon-scaffold_66-1510915933:25844..25935 | Clytia hemisphaerica | exon |
| TCONS_00071988-exon-scaffold_66-1510915933:24803..25450 | TCONS_00071988-exon-scaffold_66-1510915933:24803..25450 | Clytia hemisphaerica | exon |
| TCONS_00071988-exon-scaffold_66-1491911889:25844..25935 | TCONS_00071988-exon-scaffold_66-1491911889:25844..25935 | Clytia hemisphaerica | exon |
| TCONS_00071988-exon-scaffold_66-1491911889:24803..25450 | TCONS_00071988-exon-scaffold_66-1491911889:24803..25450 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_66 | supercontig | scaffold_66:24803..25935 - |
Blast
The following BLAST results are available for this feature:
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