TCONS_00071978 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071978
Unique NameTCONS_00071978
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1699

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071978 ID=TCONS_00071978|Name=TCONS_00071978|organism=Clytia hemisphaerica|type=transcript|length=1699bp
ACGTTGATGCTAACACGCTTACTAATAACAAGtTGATCAGACCTGTGAAG
AGCATAAGAAGTCAATCTGTCGCACCTGAAACGATTCCCATCGATAAAAA
GGTCATCGCTCTAAGCAACTACATGAATTACCGACGTTCGTTGGACGGCA
GTGATGCTCATTTCTTTGTGGCGTTAATGGATTATGACCCGGGCCAACAT
CGCAAAGATGATATCCGTTTAACCAAAGGAGACCTTGTGCAACTCATCTC
TTCCGACTCTGGATGGCTGTTTGTGCTGTTATTGAAGGATGATTTCGATA
AACAAGGCTGGGTTCCTGATACATATCTAGAACGCAAACTTGATATTGAT
GTGGGGTCTATAGCTGCTCACACCGAACGTGGTGGTTCACCCAAACCAAA
ACCACGCCCCCGCCCTGCGCCACGACCACGCACGAAACCACAAGAAACAC
CTCAAACGAATCTTCCAAAACGTCCCGCGCCACCAAAGCCTGACGAACGG
GACGCCCTTCCACCCTCGCCACCACCAGTTCCCGCTCAACAGCCATACGA
AGAAGATTTGTATGACGAACCGGAAATGACTCTGCGCTCAGTTTATGATG
CAGAGCCATGGTATTTTGGTAACATTTCCAGAGCTGACTGTGAAAGACAA
TTATCCACGTATGGCCGCCAACAAGAGTTCTTAATCAGAGACAGTCAAAG
GgcgAAGGGCTCTTATGCATTATCCGTCAAATATTGTTATAGGATCCGCC
ATTTCCCGATCGAAGCCGTAGACGGGGGTAAGCTACTCATTGGAAAACTG
AGTTTTAATAATTTGATGGACATTGTGATTTATTATCAGAAAAATCCATT
GTTTTATTCTGAACATAAAGAACCGATAAGTCTTGGTAGTGCTTTTGTGA
AAGACAGGACCGGTCAGAAAAAATGAGTTATGTACAAGGTGGTGTATGAT
GATGTGATTCAAGGAGTCGATTCAAGGAGTTGAATTTCGCTAGCCTGAAA
TACGATGATCGCTCGTGAAGAGGCTACATGTAATATAACATGAAATTTTT
AtgattcaaaatttaaagtatGTTACACGGAGATATGAATTTGATTCGGA
ATAATTTATTTGGAAATTGAATTATTGTCAATGGAATTTTATGATGGCTA
TTTTGATGAGAATTATAACGTTTTGATTTACGATGGTTGGATCATTAAga
attttaaacattattttgaTAATGATTTCAAAGAACTTTGGACAACGTCG
TCCGCGAATTACTCAATggaactggtcaaaatacaaagtaCAAACGTCAA
AACTTCAGCGTTTTGAATACTTAACTCTGATTGTAAGGTTGatatacaaa
caaaatcatGTCAAACAGATGCCTAATTTAAAACCTGGAAGGATCTCTAC
TGGAATAAGAAACCACGCGGCAATTGTCAATTTTATTGGTAGAATTGGCC
GTTGATAGAGAGAACACAAAAAACAGTACAGTCGAAACAAGGGTTGTTTG
TTTATGGTTTGTTTCTTTTCTGTTCTTGTTTAGAGTTTATCAAAGCCGTT
CTCCACTTCTGCGTGCTGCGATTGCACTTATTCGAGAAAAGCTTCTACGC
TATTGCtcaaaggaaaaataaaacaattccattggcgcgacCTGACGTAA
CGgtctaaaaaaagttgaaatgtagtCAACTTTGTTTTCAACctcgcgc
Run BLAST on NCBI

transcript from alignment at scaffold_66:51503..67337+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071978 ID=TCONS_00071978|Name=TCONS_00071978|organism=Clytia hemisphaerica|type=transcript|length=15835bp|location=Sequence derived from alignment at scaffold_66:51503..67337+ (Clytia hemisphaerica)
ACGTTGATGCTAACACGCTTACTAATAACAAGGTTTGTATACTTAAACTG
ACAACTAACTATTCCGAGAGAAAtgcactttttaaaaaagaatctGGCTT
CTAGTTTGGGTTAGCCCGTTGCCCGTCTGTCCGAAAAAGGTTAAATAATG
TTAATGATGATATAATGAAATTTGTGAAACAGTTTACCATTTCTTTTGGT
CCAAAACCCTATCCTGCGACCTTGATAAGCGTCCAAAGTCTAGGACATAT
TCTATTTTTCCAAAgctgaaatatttcttttcattgtttgataaaGATAC
CTCTAGATAAAATATCACAATTTTCAATAAACCCAAATATGAAAGAAATC
cctttaaaattcttttaaattttttatcttttcagtTGATCAGACCTGTG
AAGAGCATAAGAAGTCAATCTGTCGCACCTGAAACGATTCCCATCGATAA
AAAGGTCATCGCTCTAAGCAACTACATGAATTACCGACGTTCGTTGGACG
GCAGTGTAAGTAGACCTTTACGGTTTTCAGTGAGGAAATATTACTACATT
ACTTAGGCTGCAATTTTGAACCGCAAAGTAATACATCCTGCACCAAATCT
AATCTACACCATTTTTAAAAAGCCGGCTTCGATCATTATTTCGGGGATCG
ATTTTTATGTTCTGGAGTCGCAGAGAGAAGGTGTCATCTCTGCAGACAAC
CTACTGTTGTTAAGTAGCAATGCAATGTCGGGAGACTAATGGTCGGAACC
TCTCTCTCACATGCTGCAGGCGTATGTGAATTAATCAGCTAGCTATAGGG
TCCTGAGTGCTCCAAAGGGTGATATTAAAAACCTTTCTCAATGTGAATTT
TTTTACTCAGTTTTTCGCTGTGTTTTTTTGAGAGTTGTTATAATTGCACG
GCGACATAAAATCAAAACAGCCACATGAATTATATCATTGTGCTATAATG
TTTTATGTAATATCTTTCGTGTTTTACAGAATAGGCTTTCTATTGAAACT
ATTTCAACATAATACAAATTTTATAATATGTTACGGTCTGTACGATTTGT
GAAAAGATATAATACATAACATGTAAAGTGTTTTCATGTACGACTTCAAA
CTTTTCAGATTTACACTTTAGTGGAAATGTTTTCGAATAGAATGGGTGTT
GTTTAGTAATGATGGTGTGCCTGTGTTTTTGCGAAGATTCACCATTTTTG
TATTCCggtctggaaaataaattcAGGCAATTCGTATATTGTGCTATCCA
GCCTCCGGATTAAAGGCGAAAATGTCCAATGAATGACGTAGAAACATGGT
ACATTATTACTTCTATATGACGTTTTATAAACGTTCAATTAGAAAAAACA
TCGTTCGCCAGCTGGGTTTAATCAGCAAGTGACactcttcttcttttttg
gacctaccccggtggggtggaggagacggagcccgattttcgaaaacaaa
tttttttgggcaaatttgggccaaaaagcgggttttttggactttgtgaa
aaattggatcattgattttttgcatggaagtagggtaccatcataggtaa
aagatagcttagggagatttttgcaaaaaaaatttgttggctcaaaaaac
gcatgtttatctataagaatcactattaacaagcatacattaatgttctt
agtcaaattactcaatttttctatgagatagatgtttttttgctcacgag
ggcttacttttgaagcatatgtgtgtttagacatgaaattttggttgctt
ggcgtgtttttatagaaaaactggNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtttttatag
aaaaactggccaaattcgatatttttttataagcacattatcaattactt
aggtattagcttttctcgagattggctctttctttatgattttttgcaca
aagatgcataactataaaccctcgaatgtgactgagctcgattttcgaaa
aaaaatgtttttgggcaaatttgggccaaaaaacggcatGAAAGTGGGTA
AAAAATGGGTCAAgcagaattttgtaaaaaaacttttcagctcaaaaaac
gcatttttatctataagaatcactattaataagcatacatcaatgttctt
agccaaattactcaattttttgatgagatagatgtctttttatgcttacg
aaatcttgaatatgaaagaatatttcaagagcatgaaattttggcttcta
aacgttttttttataagaaacaaacgactaattttaataaatcgtcacta
tttgtgttctgaatgattgtttaacgttcatgctcacgtagataacaaat
atatatgtgttaaatgcataaccaggtaggtccataaaagtatcacttgt
ttttttaagaaccagtaaatttttttcgaagctcggttgttcttattttt
ttggcactttgttGGGCCTCAAATTATTCTTATCCTGTTCATATTGAGGC
ATTTTGAGACGACTTTGAGCCTCATTGGTCTTAttatattgttcttataa
agaaagagtGTACGCGAGACAGAAACCTGTTGCTTTCAAAGAGATTTTTT
CCTTGGCTTGATTTCCGGGTAATTTTAGTTGTCGGAAATGTAAATCTATA
TACTCTGACTATGAGAAAGTTCCAGTTTAAAATGTCAATAGAAGATTTAT
GGCAATATCTTGATGCAGAATGAATGATTGTACTTGTTTAGTAACTTACA
TTACCTGAATGTGAGGTTTATAGAGTGACTCCCTGTTTTAATCTTAGCAA
AACCGCAGACACTAACTTGAATTTATTAGAGGACGCCAGCAAACTATAGC
ATGTACGGTATACTACTAAGAGTGGCGAACATCATGATTGAAGAATGTAC
AACCTTTTAATAGTTTATCTATAAGAAAGGCACGAATTCATTTATGGAGT
TTGGTTTTGGctataaaataacaaaattgagTTGGCCTCGCTATTTTGTA
GTCTATATACCATATACCTTATGCAAATATTGTATGGTATATGTGTATTG
TCTAATTTAAAATTCTTTCGTATTAGCTTTATAATACAGAATCGTAAACT
ATGAAGATCTTTTCGATTAGATAAATTCGCCATTAATTATTGAAAACCTT
CCTTATATCAACACAATAAGACCTTCATCTTCCAAAACATGTTTTAGTTT
AGGGTACCTTTGAAGTTAATGAAATTATCCCTCAAATAGAacatttgttt
tcaattctgatttttcagacttttttctCTCGGATATCTCACTTTTGATG
TTATTGAAGGAATATGATATTTAGACGATGGGGTGTAGTGCGGAGTTATC
TGGTCGATCCACACTTTATGGATTTATGatggatttaaaaaattgggtct
agcccatagatttataaagcccgaagggctagatgtcgtgctttaagcca
tcgcaggcgaaaaaaaaagtgaatattggaaaaaatattgttgctattgt
tttcgagaaCCCGAGAAGCTTCCTGATTGGTCAAGTGCTGAAATTCTGTT
GTAAtttcacgtgacctaggtaggatttcctacctaaccacggtaCACTT
Tccagcaaaagtacgccatctagcccttcgggctttataaatctatggtc
taGCCTTGTCAAATTATATTAGGAATTATGGGTAAATTCGTGCGAGAATT
ACGATTTCAGCCTACCTTTCCagtccactttctttcattgggTTTTgcta
ccactgacctttatatatccctggaccaagcaatatccgccatctttgat
tggagtttttttggaattggtaccattgcaatgttaaaaattaacgtcta
acgccgctacatcatcagaagaatttgaggaaaagtagacctagcgctct
cgatgcatttacaccgctaccgagtagtgccgccattagggtaccacttt
tcaaaaaactccgatcaaagattttgcttggctgggattgagaagcttgg
tccgGGGTATATAAAAGTCAGTGGTCAGGCTATATTTTAAGCCTTGTtga
accatttttgaacttttagatTTAAGGTtgtaagtctaatgttaaaactc
tgtGTTAAAGTCTATTTTCAAACTCTACTTGTTATCTGCATAATGGTTTT
ATGATGAATAAATGAAAAAGTTGGACTTTGAAAAACATGggtctagcctg
gatatccaagctttaactttattttaattttgatatttctactGTTGGTC
TTCCTAGATGTTTATAAATTCAAGGTTGGTTGATTCTTACCTACGCATAA
TCATTGAATTTATAAAAGTACGCATGCCTCCCGATTTTGCAATGTAGTTC
GATATAGGAAGACCATGTTGTTAACCAGCAACATCAAAATAGAAGGGGAa
gttacagcctggatatcgtGGTTAACACTAAATTCGGTCCAGTCTATCAT
GATGCTATATGACCAATAGACCGATTCAGCAATATTCAGTCAGGGACTAT
CCTCTTCCTAACTGACATGAATTTCACCCACGAaacaaaacatacaaaaa
acaATGTGCAGGTTTAAACTTGGAAATATTTGAAGACTTTGAGCTATCAT
GGTGTTGCTATAATtcagaaaaatgaaatatcGCTTATCGTGGGTAAAAA
TGACGCCACACAGAATCGGGCTGTAGAAGTTTTTTAATGGCCCATGATCC
TTTTTATCTCCCATAAATTGCTGCGACCAGGAATGGCTTTAGATCAACAA
aacattggtcaaaattttccGTAAGGCTCTTTAAGCTGTTGAGGTGTCTT
TTAAAACGAAACTTCGATAGATATATTCATATAACTTAGCagctagaaaa
aattattttctttggtGTTCTAAAGGGAGAAGTATCTTTAAATCAGTTGT
CAAACAAATTTACCAAACGTGATCAAACGAAGGATATTATCCCAGTCAAA
ATATTCACCATTTTAAATAAGCTTAGGATGAGTCAAGTTTCTTATTTAGT
AGTTTTATTTATGTCCCCCTAGAGGATGATTTCCATAatcttttgaagaa
tttgtttgaaaatagttttcataattgaataattttaagctttttgagCT
TTGTTTGGGATGAGTCTTATTTTctgagaaattattttgaaatattctat
acaaaaattgaaaaagtttgttGACTATTCCCCTAAGTCTGTCAAATACT
GAAATTATTGAGACACTCTGAAGTTATAAGGAAACTATACGCATCTTTCA
GAAGATTCTTTTGGTGTTCAACTTGAACTGCGTCAGTTTCTAAaaattat
acacgtttttttttataaaaacatctaaaaattttaaaactttgagatgt
tcttaatttttttagttttaagcctagaaatgttcttaacatgttcctat
tttccccatttttggagtatttttgtccattttcacgTAGaaaagtctgc
aaagccttaaaatgttcttaacattttggccatcaaagcctcgtgttctt
atatagtttgttcttataaaaaaaacgtgtagtgtcaTTTCCTCAAGGGT
AAGAGCCCTGTGTGGATTCCACAATGCAGATAAAATTTTAAGGTATAATT
TTCGCCTGCCTGATTATTTGGTCGTTTTTTATCAATTGGGTTTGCGATTT
GTGTTTTATGACCTAGTTTTGGTCACTCTAGTTTGATACTTCAAATGTCG
ACTGTCAACTAACAAAGTCATAAGACGAACTTATAAGTGAGTGTATTGTT
TagagaaattacaaaaaaggtcattaaaacaaacaaaagtaTATTTATCa
tccaaatttcatcaaatcgATTGGTTGATTGATATTCAAAATGTTTTCCT
GTTGTataatgacaaaagaaaaacatggtCTGTTTTCAACCTCAAagcat
gatgacgtcatcactagcaaaaatgaatttcaaagagaaggaacgaaaaa
agttgatttttatgGAGAAACACCGTTGACTTCAGCTCTGGATATTCAGG
AGAATCAGTCTTTGGAGAAGACTTTCAACCGaggaattttcaataaaaat
ttgaccaaCGGTAGGAAACCTGAGGATATACCAAATAATAAATCAGCTCA
TTTCGGTGGAGGAAATACAACTAACAGACCTTTCAATACAAGATTGACAG
AAGATTTAGCCAGCGTTTATAAAGTAACCAGGGAAAGAACCTATTCTGGT
GGAAATTTGACCAACAGAACTTTGTCATTGGATGATACTGTGACCAGTAA
GAATTCTTACGAAGTGAGAAGTCCTCTGCATNGAAATTTGACCAATAGAA
CTTTGTCATTGGATGATACTGTGACCAGTAAGAATTCTTACGAAGTGAGA
AGTCCTCTGCATGGTGATGTAGGTTGGTTTGGTGGTTTTGATTCGTACAT
TGATATGATGGGTCGCCTTGAGGTAATTAAAaagatatctttatgtagaa
aatggCTAGAATAGTCCACAGCTATTTCAGATTAAGAGCCCCCTGTTAAG
GAGGTCACTTTTTGGAAGGTTAAAATTAGACCCCAAAAGCCATTTCTGCT
TTTCAAATTGAACATAAAACTCTGCTTTTCAAATTGAACATAAAACAAGT
TATTTTTTTGGGCTGTTTttgtataaaatatatattttttccataaatcc
ttttttgaaaattgaccaaagaAGACTTCGATGACTTAAAAAAATCTCTT
GTGATTAGTTGAAAGTCGTCCTGtttcacacccccttctcacagacccac
tgggaccccttcctaCTGGAAAACTTGGTAAAAATATCGCCCCCGCTGGA
AAATTACCCTCCAATTTTTGtacccactgaaaataatctatTTAACCAAT
Ccttactgcaaaatatttaccatttttcaatccccattgaattttctgac
ttgaaaacaaaacaattgaaatcCCCAGGGATAAAAAGTAGGGGAATATC
AATCCCGCCGAGTTTCAGTCAGTGTTTGTTATTTTTGGTTTTCCCAACAA
GACATAATTTTCACAGTACACGTGAGGAATAAGCTCAGTCATAGTTTAAG
TATTCCATTTTGTTGAAaccatcaaaaatatttttaataccGTTTTTACA
CAGCATGCCTTTTGAACCGTTGCGAGGAAACGttgaaaaatacacttttt
ttataaaaacatccaaaatattttaagccttcggatgttcttaactttta
gagtctaaaaatgttcttaacatgttcttattttgaccattttggatgaa
tatttttgaccaccttcctaagaaatagggtgtttttgagtccataaagc
cttaaaatattcttaacatgttcttaacattttttccaacgaagccttat
gttcttatatagtttgctcttataaaaaagaacgtgtattTCCTCATTAT
AAGATATGTTTTCTCGCAAGAAATATATACAGGGAACAGCTTGTAACTGC
TTTAGCGCTGAGATTTCAGTATTTGCTGAGATAAATGTGTTATGctaaaa
aactttgcatttagttTGCTATGTTAAATTTCTTTTACTGGGCTACATTT
TGAATTTGGTGTTGAAATTCAATTTGCTAAGTTTATCTAGAGCGAATAAT
GATGAAAGGTTTGCCTCTGTTACTCTTAAAATCGGTCATATCAAAGTAAT
GGCTTTAAACTTGAATAAACGAGACAAATATAACGGGAGCAACAGAATCA
GAGAGAGAAATACACTAACAAAAGAATAGCAATAttgattttttgtgttt
tttatacGGTATTTGAAATCAAGTTAATTACCTTCATTGacgaaaattac
cataattgcCTGGTGATTAGTGAAAAAGAAgagattgaagtttttttacA
CTGTGTTACTCTTTGATAGTTGTTTAGATAATGAAAAGATTGTAAACAAA
TTTTCAACCTGTTACTGATAAAAGTAAACACTacaagtttttaggatttt
tccttttaaaagGGTCCCTCGGCCCGATAGTTGTACTTGAGCACTGGTTA
TCTTCCTGTAATAAACTTGTTTTTGACTTGGCTGGAAATAAAGAATCGAT
CAGTGTCCAGTTTACCGCAATGTTGATTCCACAGTTATGCTTGACAGAAG
TGGCTCGCATGTATGGCAAACGCAAGGTAATGAAATGTCTTCTTGGAGTG
ACTGGGATGATTCTAAATTGACACGCGATATGCTGTTTATCTAGTTTAGG
CGGTTATTTAAAGACGGTTGTTGTTCCATGTTGTGGCTGCTGAGTTACCC
AAAAATCCCGTAGAGTCTAATATATTCTgatgtttttttgcaaaagttca
gTGGGTTTGATCCATAATATTTGGGGAGGGGTATTTTTTTCTGGTATTGT
CATTGGGCTTTTCTAGAAATAGTCcgtacaccccctgttgaggatatcga
aTATCCAgagggttaacgatttttgttcaaaagtggatatccatcgggtt
aagtgtcttttcaagtaaaggGGGTAAgcaagcatctttataagagagga
tatccagagggttgagcatatttttaagagtggatatccacggggtcttt
actaataaagatatccaggggggtttgatatttcgaaaaatcaatatcct
caacagtgggggtaaattgtttttctggaaaagcccaattagtgagacaa
aagaaattatgaaaGGTCAATAATATTACTGGTTTGGGGATTGAAAAACA
AACCGTTTACACTTCACCGATGAAAACTTTGTTCCATAGCAGATGACCTC
CTTTTCAAATGACGCTGTTCGTGGTCAATATAAACCAATCCTGACCAACC
AAAACCAATATCAAACAATTTAATTAGTTACTTTACTAATTCTGAATTCT
GAAGGTTGAGTAATTTGAAATGACGGTGTGAAGCAAAAGAGGAGGAGTTT
GATCAAAAGTGTCTTTTCAGTGATGTGTAgtacaatatttttgtcgatgT
GTGATTCACACAATACTGTATATTTGGCTCTTTAGTTTGGAAGCAACAGA
AAATCGAAACCTCAGGGAAAAGGGAAATCGTAAAAGCCTATACACGCcta
catttagggggggggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNggggggtcttcttagataAGGGTGATCTTCCGTGAATTATGACTTTT
GTACAATCGttccatttatactgattttctaagggggtgtgaaatttgaa
atgaatttcctaaggggggttagcacttaagggggggggggtcttgaccc
ctctaggaACTATGGCTTTACGCCCGATAATTCATACGAAAACAGCGGTA
TTTTTTAAACGTACAGAACAATCCGACAGTCACAGTGCAATTTTGGAACT
TTGAGAAACCTAGTCATAAGGACTGAACTACCATCTGCTGGTTCACTTAG
CGCCTTGAATATCCCCTTAGTCTAGAAGTGTGAGAcctttagacagtctt
tcgttTGCTTTAACAACGGCCCGTCCACGGCAAGCCGCTTTGGTTATTTT
TGAACTGAAAGCAACATTTGAAGAGGTGGGAAATCGACTCATTGATTTTC
TGTGTTGCTCAGACGAAAGTTATTTTGGTTCAAATTAGATTAGTCTAACG
TAAAATGCTAGACGAATAATTCAAACATAATggaaaataggcaaaaaata
TTGGGAAAAGGACAAATTTATGTTGTCCCTAAAAACTTTATCGTACTATA
CAATAGTAATATATTACTATCATATAACACCcttattactgtattacacg
gaaTGTGAACGACTCTAATCTTGGTTCAAATTAATcatgttatttttatt
gaagCGCTATTAAAGCTCTAAATTGTGGTGAGCGTGATAATGAATTCGCA
AAGTTGTTAAGAAAAGCAATTACTGATATTAAACGTAAAAAGAATTTTCG
TGTTTCTCATTCATCATTCGTTGAAATACCTCANGCAATTACTGATATTA
AGCGTAAAAAGAATTTGTGTTTCTCATTCATCGTTTCGTTGGAATACCTT
ATAAATGGATTTTTAAGTAAAGTGGTTTTTGTTATTATATTAGATGAAAT
TTTAGCCCTCAGTCTCGAGTTTTTCCtgtttgatttaaatttttaaacat
aTACAACAGAAGATTCTAAAGCAGAAATGGTACGGTTATCTTCTATATTT
TGGTATAAATATTAACAGGGGTTGGTCTAGGTGATATACAGGGTGTTACT
TCTGCATTCCGCAAATTTAACAGAATGGGCTGGGTTAATTGTCGTGTCTC
AGAAATATTTCTGGAGGGCCAAAACTTGACTATTTTTTTTCCTTAATATA
TATACTATTTAGTCCTGGTAaaacttttattctatttgtacgCTTTGTGT
CGGGATTCTTTCTTCACATTTGGatgaaatattcttcaaaatttaCGGCC
TTGTCACAACTTTGACACACCTTAGCTTGAGCTATGACGTCACTAAATGA
AAGATTTTACCTGTCATTTGAAAATGCTTCTAATCTTCTGTAACGGAAAT
TTGACAATTTATGATATGTGTTAATGGCGGTATAAAGTGTGTTTTCCTCC
GCATCGATGTTAAATTGTTTTACATAGGATATTACTTCTTTATTATCTTT
GCTATGGCACTGTTTCTTAAGTTCCTTCTGATACAATAACTTCTACTGAT
TTTCAAAGTTCTGACAGGTCTTTGCACCGTTTTGATTGactgatattttg
taattcaaATCTCTCATTGCACTTGTTCTTCAAGTGTCGTTCGGGTGTCA
AGGTAAACGCGATAAACCGGCTACTTGCGTCTATAAAGAGTCGGAATGTT
ACCTACTCCCCGTCGGTAGGACCTATATTTgagcatagtcattataaaaa
aatccgGTCNAAGTATCTaaaatcatagtcattataaaaaaatccgGTCt
tgtttttttggctttttgttcaattttcttttgttacaaacaaaagacaa
gttgcgatttgcatactttttaatcacgttaccaaaatctcctcttaGGA
TTGGTCTATTCtataatcacatgatcaaaaagttcaattttggtacgtaa
gctccatcttttaacaataaaaagagacaaaaatcttccagaccagtgtt
tttacaATGACTATGATTTTAGATACTTGAGTGTATAAAATCTCGACAAG
CCTCGCCTGACGAATTTACTGACCCAATATAATGTACCGCTCAAACTAAT
AATTATCGGTCTCCCTTGACAGGATGCTCATTTCTTTGTGGCGTTAATGG
ATTATGACCCGGGCCAACATCGCAAAGATGATATATATGTACAATATATG
TACTGCTAaaagaccgtgtaactaataatCGTCTGTCTTTCTTTTTTAGG
ATGCTCATTTCTTTGTGGCGTTGATGGACTATGACCCAGGCCAACATCGC
AAAGATGATATCCGTTTAACCAAAGGAGACCTTGTGCAACTCATCTCTTC
CGACTCTGGATGGCTGTTTGTGCTGTTATTGAAGGATGATTTCGATAAAC
AAGGCTGGGTTCCTGATACATATCTAGAACGCAAACTTGATATTGATGTG
GGGTCTATAGCTGGTAAGAATAAAGCTCTCGTTTTATTTTTGACTGACTT
TAAAATCCGCAAATACCTCCCTCAAGTTCCTTGGTCGTTATGTCCTTGCT
TTGCATACCAGACGCACCACAAACCTTTTGACTTCGGAATTTAAGGTTTG
TAATTCTTTgggaaaaaaaagtttcattttataACTGGTAAAGATTTTCT
CATAATGAAGCATCTGAAGACTGCACagtaaatttcttttctttacgGAA
GAATCTAAGAGACAGATCTACTTAATTGGCTTAAGATGTAAATTGATCGG
TTTTTCTGTGTTATAATTAAAAGAGATTTAAAGAgaattatttttgataa
ctcgtaaatttttttctgaatttgaaaaatggttGTACCTTTCTATGGAT
TTTTACAACATGAAATTTAACgccatgaatatcatgaatgttCACTTTTA
GCTCACACCGAACGTGGTGGTTCACCCAAACCAAAACCACGCCCCCGCCC
TGCGCCACGACCACGCACGAAACCACAAGAAACACCTCAAACGAATCTTC
CAAAACGTCCCGCGCCACCAAAGCCTGACGAACGGGACGCCCTTCCACCC
TCGCCACCACCAGTTCCCGCTCAACAGCCATACGAAGAAGATTTGTATGA
CGAACCGGAAATGACTCTGCGCTCAGGTAAGACCTAGCTATAATTGATGA
ACCTTTCAGCCTTGAAAATCAAACTCAtctcaaaaaaggaaaaactgcAT
CATTCAGTCCCGCAAGTGTTTTACACTATTTACGTTACTTCTCTTACGTA
GGGACATTGTTATATAATTGAAATCAGAAGATTTTTAGAAGCCAATTATT
TGTTTCTATTCTCTGAGATCTTCAAGATAATCGAGAGCGTCCTCTACGCT
CTTAGACATTTCCATCATTTCGTTTCGGGTATTTATATATAAGTAAATTT
TGTCGCCCGACACAAAAATTGGACGTGATTGTTCGGGGGGGGGGAGTCTG
CTGTATTACACACTTTCATCCTCTTTTTTTTCAAGAGTGTTAcatgtaaa
atttcaattcCGCTTTCTATTTCTAGTTTATGATGCAGAGCCATGGTATT
TTGGTAACATTTCCAGAGCTGACTGTGAAAGACAATTATCCACGGTATGT
ACCTGCCCCTCGGCAAGTTACTATTTGCTTTGATGTAAATTATGAAAACA
TCAAAAGAGCTAGATATCCAAGatttcagacaaaaaataaCTTCATTTAT
GTGTATACCTAGGGAGACATTCGTCACACACGCATTGACAGACGGTATAA
TTGTAGGCTGGTGACATTCACTAATgaattcgtgctccttatactacctg
cAGTTtcgtagaggtctgcgattatGACTAAAATATGTTTTACAGACCCG
ACGGAACAACTGTTAAGgtgggaggctgaaggctcaaaatgagataaaat
tcgttAGGAATTTGAGgagaaaatctcatttgctcaaaagtggggaggct
aaaGTCTCCCCattctccccgcttccgccgggcctgtttGACGACCATTC
AAATGTACGCACATAGTCTTTGCAATAAAGCTACTCAAAGAGATTAATTC
TTCTCTTATGACTCCAACCTACAGCAGTATCGGCCCTAAAATCTGTTCAC
TGATTCCATTTTAGTATGGCCGCCAACAAGAGTTCTTAATCAGAGACAGT
CAAAGGGTGAGTAATGGTTTTATTTGTATactcatttttttatgagaaca
cgAGTTTGAATGTTAGCAAACCCCTAATAACATATCAAGTACAAATTAAG
CGCTAGATTCGAGAAACGGTTAAGAAAATACTGATTCTAAGCCCTTTTTT
GAGCCATCGATGAATGAAAAGAGGAGTCACataatactttaggcgtacaa
actttcgcgagcagaaactttcgcgaggtcgaaaaatcgcgaaatttgcg
agcataaactttcgcgaatcgttggataaaaattgccttaaaagtgaaaa
atattccttaaatcgcgaattgccctgttaaaaattttcaacaacatTTA
CTTTGGCGAAAAAgcccaaaattcgcgaaaatcgttAAGTTtttcctcgc
aaaagtttgtacgcctaataAACGCATTTTATACTCAAGTAACAAGGAGA
TTTTTTAACCGAATTTcttacttttcaatttttcaggcgAAGGGCTCTTA
TGCATTATCCGTCAAATATTGTTATAGGTGAGCGgaagaaaatcattttt
gcgaCATGTAAATTATTATGTTATAACACAACCTCAGAAAAAGAGCTTAA
CAGAGAGGGGCGTCAAAGGTGTCGTCATTCCTTCGAATGTATGCAATTAT
ACATACCGTCaactctctcttattcgaacctctatcattcgaatttttct
gtaaatCGAACTAAGATATTGGTCTATACAACTGGCAAGTGATTTGAACT
ACTCTCTggaattcgaatctttctgtaattcgaatgaaattgaagatcga
ataagagagagtcaactgtactgCGATCTCTTTTATAAGACACCCCCTTT
CAAGTTCTTCCAGATTTGAACATCTTCAggtaaattttaacaaaatgctc
taaaaaaaatttttcctttatGTTTTAGGATCCGCCATTTCCCGATCGAA
GCCGTAGACGGGGGTAAGCTACTCATTGGAAAACTGAGTTTTAATAATTT
GATGGACATTGTGATTTATTATCAGAAAAATCCATTGTTTTATTCTGAAC
ATAAAGAACCGATAAGTCTTGGTAGTGCTTTTGTGAAAGACAGGACCGGT
CAGAAAAAATGAGTTATGTACAAGGTGGTGTATGATGATGTGATTCAAGG
AGTCGATTCAAGGAGTTGAATTTCGCTAGCCTGAAATACGATGATCGCTC
GTGAAGAGGCTACATGTAATATAACATGAAATTTTTAtgattcaaaattt
aaagtatGTTACACGGAGATATGAATTTGATTCGGAATAATTTATTTGGA
AATTGAATTATTGTCAATGGAATTTTATGATGGCTATTTTGATGAGAATT
ATAACGTTTTGATTTACGATGGTTGGATCATTAAgaattttaaacattat
tttgaTAATGATTTCAAAGAACTTTGGACAACGTCGTCCGCGAATTACTC
AATggaactggtcaaaatacaaagtaCAAACGTCAAAACTTCAGCGTTTT
GAATACTTAACTCTGATTGTAAGGTTGatatacaaacaaaatcatGTCAA
ACAGATGCCTAATTTAAAACCTGGAAGGATCTCTACTGGAATAAGAAACC
ACGCGGCAATTGTCAATTTTATTGGTAGAATTGGCCGTTGATAGAGAGAA
CACAAAAAACAGTACAGTCGAAACAAGGGTTGTTTGTTTATGGTTTGTTT
CTTTTCTGTTCTTGTTTAGAGTTTATCAAAGCCGTTCTCCACTTCTGCGT
GCTGCGATTGCACTTATTCGAGAAAAGCTTCTACGCTATTGCtcaaagga
aaaataaaacaattccattggcgcgacCTGACGTAACGgtctaaaaaaag
ttgaaatgtagtCAACTTTGTTTTCAACctcgcgc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044689XLOC_044689Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071978-exon-scaffold_66-1491911889:51503..51534TCONS_00071978-exon-scaffold_66-1491911889:51503..51534Clytia hemisphaericaexon
TCONS_00071978-exon-scaffold_66-1510915933:51503..51534TCONS_00071978-exon-scaffold_66-1510915933:51503..51534Clytia hemisphaericaexon
TCONS_00071978-exon-scaffold_66-1575043694:51503..51534TCONS_00071978-exon-scaffold_66-1575043694:51503..51534Clytia hemisphaericaexon
TCONS_00071978-exon-scaffold_66-1491911889:51888..52007TCONS_00071978-exon-scaffold_66-1491911889:51888..52007Clytia hemisphaericaexon
TCONS_00071978-exon-scaffold_66-1510915933:51888..52007TCONS_00071978-exon-scaffold_66-1510915933:51888..52007Clytia hemisphaericaexon
TCONS_00071978-exon-scaffold_66-1575043694:51888..52007TCONS_00071978-exon-scaffold_66-1575043694:51888..52007Clytia hemisphaericaexon
TCONS_00071978-exon-scaffold_66-1491911889:63425..63470TCONS_00071978-exon-scaffold_66-1491911889:63425..63470Clytia hemisphaericaexon
TCONS_00071978-exon-scaffold_66-1510915933:63425..63470TCONS_00071978-exon-scaffold_66-1510915933:63425..63470Clytia hemisphaericaexon
TCONS_00071978-exon-scaffold_66-1575043694:63425..63470TCONS_00071978-exon-scaffold_66-1575043694:63425..63470Clytia hemisphaericaexon
TCONS_00071978-exon-scaffold_66-1491911889:63598..63765TCONS_00071978-exon-scaffold_66-1491911889:63598..63765Clytia hemisphaericaexon
TCONS_00071978-exon-scaffold_66-1510915933:63598..63765TCONS_00071978-exon-scaffold_66-1510915933:63598..63765Clytia hemisphaericaexon
TCONS_00071978-exon-scaffold_66-1575043694:63598..63765TCONS_00071978-exon-scaffold_66-1575043694:63598..63765Clytia hemisphaericaexon
TCONS_00071978-exon-scaffold_66-1491911889:64204..64428TCONS_00071978-exon-scaffold_66-1491911889:64204..64428Clytia hemisphaericaexon
TCONS_00071978-exon-scaffold_66-1510915933:64204..64428TCONS_00071978-exon-scaffold_66-1510915933:64204..64428Clytia hemisphaericaexon
TCONS_00071978-exon-scaffold_66-1575043694:64204..64428TCONS_00071978-exon-scaffold_66-1575043694:64204..64428Clytia hemisphaericaexon
TCONS_00071978-exon-scaffold_66-1491911889:64829..64896TCONS_00071978-exon-scaffold_66-1491911889:64829..64896Clytia hemisphaericaexon
TCONS_00071978-exon-scaffold_66-1510915933:64829..64896TCONS_00071978-exon-scaffold_66-1510915933:64829..64896Clytia hemisphaericaexon
TCONS_00071978-exon-scaffold_66-1575043694:64829..64896TCONS_00071978-exon-scaffold_66-1575043694:64829..64896Clytia hemisphaericaexon
TCONS_00071978-exon-scaffold_66-1491911889:65417..65458TCONS_00071978-exon-scaffold_66-1491911889:65417..65458Clytia hemisphaericaexon
TCONS_00071978-exon-scaffold_66-1510915933:65417..65458TCONS_00071978-exon-scaffold_66-1510915933:65417..65458Clytia hemisphaericaexon
TCONS_00071978-exon-scaffold_66-1575043694:65417..65458TCONS_00071978-exon-scaffold_66-1575043694:65417..65458Clytia hemisphaericaexon
TCONS_00071978-exon-scaffold_66-1491911889:65939..65979TCONS_00071978-exon-scaffold_66-1491911889:65939..65979Clytia hemisphaericaexon
TCONS_00071978-exon-scaffold_66-1510915933:65939..65979TCONS_00071978-exon-scaffold_66-1510915933:65939..65979Clytia hemisphaericaexon
TCONS_00071978-exon-scaffold_66-1575043694:65939..65979TCONS_00071978-exon-scaffold_66-1575043694:65939..65979Clytia hemisphaericaexon
TCONS_00071978-exon-scaffold_66-1491911889:66381..67337TCONS_00071978-exon-scaffold_66-1491911889:66381..67337Clytia hemisphaericaexon
TCONS_00071978-exon-scaffold_66-1510915933:66381..67337TCONS_00071978-exon-scaffold_66-1510915933:66381..67337Clytia hemisphaericaexon
TCONS_00071978-exon-scaffold_66-1575043694:66381..67337TCONS_00071978-exon-scaffold_66-1575043694:66381..67337Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_66supercontigscaffold_66:51503..67337 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.397396	0.550312	0.329408	0.189044	0.66201	0.545533	3.70879	4.25191	3.7123	4.83473	2.08497	2.05851	4.36186	2.73266	1.53569	2.352	3.77524	3.88135	3.63906	4.95381	3.77133	3.9172	1.08514	1.87258	0.965638	2.15386	2.661	0.994223	0.610595	0.599684
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00071978 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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