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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071947 ID=TCONS_00071947|Name=TCONS_00071947|organism=Clytia hemisphaerica|type=transcript|length=967bp
CAGAATAAGAACAATGCTTTTATTTGGTATTTGATGTGGAGGATTTTGAA
TGGTTTCCATGAAAAGATTGAGTACAGTTTCATGATAGCCAGCCACACGA
AATTCAGCTGTGACAGgtaataaaagaattttgttGGGTAAGTTTGTTGT
TTCAAGCAAGGTAAACAGACTTAAAAATTAATTCCACTTTTTAAGTTGGT
TTATTACCTGTCACAGCTTTTAATTCAGACTTAAGTCTTGTTCAGCAtaa
ttttagacaaaatttttaaaacataattcattaaaacattaaaaattaca
aaaatagttGTCGAATAAGACTGAACTTTAATAAATGGTGGTTGTCGTCA
CCTGACCAACCCTTCTCAAAACTTACCaacccagaaaatttttttactct
gaaaattaaatagaaattttgaaaaatcatcaaaacaaaatatttctttt
cgaGCGACCGGTCAATCTAGGGTCAGGTGATGACAAaccaatttatattt
ttaagcgCAGCCTAAAATGTATATTTTTGTATCTTCTTTAAGGTGCTTCG
GCAGCTTCAAAAAGAAACTACGATTAACTCGAGTATCATCTCTGTACGAG
ATCGCTGATGTTTGCGACCAATCAAAATGTAATTTCGCTGTACTTGTTGG
TAACCACAACAAAGATATCACTGTTCAAACGTATGACTGGTCACATTACT
TTGAAAAGGAGTTACGGTTCCAGACCATCAAAGATATTCTTAAATATCAC
CATTTCAGGATGTCGAAGGATCAGCCTGGAATTGTTAAGTGTTATAAATC
ACTAGATGATGAACCAGTCGAGTTCTCCATTTTCATTCAGCGAAATCCAC
CAAAAGTGACTGCTGCATTACCGAAGATCGTCCCACCGAAAGGATTCACG
AAACAGCGGGCTGAATATTTGCGTAAAGAAATTCGTCAATTCTGCAAACA
TGGAACGGAGGATTTGG Run BLAST on NCBI transcript from alignment at scaffold_65:170383..171349- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071947 ID=TCONS_00071947|Name=TCONS_00071947|organism=Clytia hemisphaerica|type=transcript|length=967bp|location=Sequence derived from alignment at scaffold_65:170383..171349- (Clytia hemisphaerica)
CAGAATAAGAACAATGCTTTTATTTGGTATTTGATGTGGAGGATTTTGAA
TGGTTTCCATGAAAAGATTGAGTACAGTTTCATGATAGCCAGCCACACGA
AATTCAGCTGTGACAGGTAATAAAAGAATTTTGTTGGGTAAGTTTGTTGT
TTCAAGCAAGGTAAACAGACTTAAAAATTAATTCCACTTTTTAAGTTGGT
TTATTACCTGTCACAGCTTTTAATTCAGACTTAAGTCTTGTTCAGCATAA
TTTTAGACAAAATTTTTAAAACATAATTCATTAAAACATTAAAAATTACA
AAAATAGTTGTCGAATAAGACTGAACTTTAATAAATGGTGGTTGTCGTCA
CCTGACCAACCCTTCTCAAAACTTACCAACCCAGAAAATTTTTTTACTCT
GAAAATTAAATAGAAATTTTGAAAAATCATCAAAACAAAATATTTCTTTT
CGAGCGACCGGTCAATCTAGGGTCAGGTGATGACAAACCAATTTATATTT
TTAAGCGCAGCCTAAAATGTATATTTTTGTATCTTCTTTAAGGTGCTTCG
GCAGCTTCAAAAAGAAACTACGATTAACTCGAGTATCATCTCTGTACGAG
ATCGCTGATGTTTGCGACCAATCAAAATGTAATTTCGCTGTACTTGTTGG
TAACCACAACAAAGATATCACTGTTCAAACGTATGACTGGTCACATTACT
TTGAAAAGGAGTTACGGTTCCAGACCATCAAAGATATTCTTAAATATCAC
CATTTCAGGATGTCGAAGGATCAGCCTGGAATTGTTAAGTGTTATAAATC
ACTAGATGATGAACCAGTCGAGTTCTCCATTTTCATTCAGCGAAATCCAC
CAAAAGTGACTGCTGCATTACCGAAGATCGTCCCACCGAAAGGATTCACG
AAACAGCGGGCTGAATATTTGCGTAAAGAAATTCGTCAATTCTGCAAACA
TGGAACGGAGGATTTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00071947-exon-scaffold_65-1575043694:170383..171349 | TCONS_00071947-exon-scaffold_65-1575043694:170383..171349 | Clytia hemisphaerica | exon |
| TCONS_00071947-exon-scaffold_65-1510915933:170383..171349 | TCONS_00071947-exon-scaffold_65-1510915933:170383..171349 | Clytia hemisphaerica | exon |
| TCONS_00071947-exon-scaffold_65-1491911889:170383..171349 | TCONS_00071947-exon-scaffold_65-1491911889:170383..171349 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_65 | supercontig | scaffold_65:170383..171349 - |
Blast
The following BLAST results are available for this feature:
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