TCONS_00071931 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071931
Unique NameTCONS_00071931
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2895

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071931 ID=TCONS_00071931|Name=TCONS_00071931|organism=Clytia hemisphaerica|type=transcript|length=2895bp
GTTTGGGACAGCAACTCTTGTCAAACCGAATTCTAACTGCTCGCAAGAAG
AAAATGTATCTGTTAGATAATGAAAATCGTGGACGCGAACTAAAAGTCGA
CCAATTTCCTGAATTGACATCGATTCTCGAGACTTTCTTCGAGGAAGGAG
GAATGGAAGCACACCCACGGCTTACAACGACTACACTGTTCCGGCATGAA
CAAAACAATATGTTTATGCGGCAGGCAAGAGAACGTATCATGATGCATGC
CCCTGACCAGTTCAAAATAAGCCTTTCTTCTTGTTTTAATTATACAATGA
ATTATCGTGAAAACAGCCGCGCCGCAATCCAACATCATCACGGTAGAGGG
ATAAATGCTGATATATCATTAAAGAGAGCCCCGCGTGCTACTTCAAAGAA
GCCTTACCAACCTAGACAACACCGTCATTGATTCAAAAGATGCAAAGAAA
AATGTACCAGCTGATATAACACCCGTGCAGAAACCTGGCAAGAGCTGGAA
AAAAACCAACGCCCCTGATCATGATTGGGATCAGAGTAAAACTAACGCGG
TTACACCCATGACACATCTACTTTTGGAAACCAAAGAGCATGAAGCGACG
GTTGAAAGCATCGGAAGTGATCTTAAGAAGGTGACAACCATTACTCGTGG
AGGCAAAGCCTGTACCCTCATCAATTTAAGCTATTTTGAAGCTGACTCCA
CTTTTCGTAGATTAAACGAAATCTTCACTTTGTTGGCAAACCCTGGCCTT
GACAAATGGTTTCGTAACGCCATAACAGGATGTCTCAGAACACAAATGGC
TTTTATTGTAGACAATGGTCCTGGTGAAGCTCCGAGTAGCCCGTTGGTCA
AAATGCTTCTTGCGAGATTATTGAATTACCTTAATCTGGACGTAATTTCA
CAGATGTCGTTTGCAGAGTATAATTCAAAATTAAACTATGTTGAGCGTGT
GCATGCCGTAGAAAATGATTGTATAAGTCGTCATGGACCCTTCAGTTCAA
AATTGAAGCATGCTGAATGTGAAATTGGAGACATAAAACATAGGGAAAAT
ATGGAGGAGATGTGCAAGCAGGTCATCGATTGCATCGGACAAGGGGGATA
TTCAGGCCATCCATTGACTTGTGTTCGTGGCGTTCGAGATGAAGAATTTG
TATTCGACGATGAAGAACGTTTGCGAAAATTCCTAATGTTATCGGAAGAA
GGGAAAGAGCTTTGCGACTGGACCTACAAGCCTGAAGAATGTCCATTAGC
CATCCACATGAAAATTCTGTGGAAAGCCAATGATTGTGAAAGGAGATACA
TTGACGATTACAATTTACTGACAAAGCTAAATACACCGAACACCAATTGG
AGTGACAAATACAGTTGCATCCTTTATAgGGAAAATGACATGGAACAGAA
TCAAGCAATCTCACGACATCCTCCACAGCCAATACCCGATTTTGTGCGGT
GGGTGGAGACAGAAGAGCTTCACTACTTGTCTATCTCAAAAGCACAAGAA
ATTAATGAAATAATTCCTGTTCTGACGCAAACGCCGGAGCTGTTTCTACC
ATCCAGGATTTTGGACGCTGTCCTTCGAATAACGTTAGAAGTCCCAAGTG
AAGTTTTGGTATCGCTAGCTCTTCTCGAATGGGTGCCTTTAGACGATCTC
AAGGAATTCATTGCAGagaagaaatcaaaacaagagAAATTGATCAATGA
AGGGTTGGAATTGGAGAGAGTCCGTAGACATCCACTGTATAAAGTTAAGA
AAGTACAGCTAGTCGAAAAATGTAAAGCGGAAAAGATCAAACATCAATTC
AAAAAGAAGCATGAGTTGGTGAAAGCATTGATGAAGGAGGAAGCGCCCCC
ATATCAGCCAATTAAACTCGAAGGTCTGCCGTCGACTTTGTATCAAATTA
CAACTAAAGTACCAGTGTCCGATTTGAGGTTCATCCTTCATCAGAATGGT
CTATCAACAATCGGTACCAAAGATGAACTCGCACTCCGCTGCTACCTCAA
GAAGAACAATAAAGATGACTTTATATCCAAGGATGAGGTTTCAAGCGTAA
TGAAGGTGATCAAAATCGCGAAAGAAGTTATTTCGGAACAAAAACGAATG
TCAATCCTTGGTTTCCAAGATGAAATTACTAAAAGAAAAAACTCATCGGA
AGTCACTCGTTCGAAAATCCAAAGACCCGAAGATACCAATTTCGAGACCT
TGGCTGATATATTTTCCCCACTGGAAACTTTTATAAAATCGTTTACGGAT
CCTAAAACAAGAGACATCGGGGATACTGATGCCATTATGGATGATATTGA
AGATGGAGAAACTGGACAATTGGACAACTACGAGTGTTTTTTCCAAATTG
GGGCCAAAGTCAAGGTGTTTTGGAAGAAAGAAGACGTACAAGTGCTTGGA
TGGCGAGGTGGTTGGTATGTGGCCTACGTAACGGATTTTTGTAGGGAAGA
GGATCAGATATCTGTCCAGCACGTGAGTGAGCGTGACTCAATTTATGACT
TGGAAGTAACATCCTCGTTGTCGGATAACCAACTTAAGCTAGCTTAAGTT
AATTCACAGACAACCCTATTCTGCTGATTTTCTATACATCATTTAACGAG
TCAACTTCTAGCCATTTTGAAAAGCGTGTATAAGCCAATATAAGAAATAA
CAATCATGACACACCTTTATGAGtttaagtttttgtttgttcttatgaGA
AGCTTTTCAGGCTTGATGACCACGTCATGGGTCCATTTTGCctgtttttg
ccaattttcgaCCATTTCTAACCTTCTTTgaagggctgtaacttttggtC
GAAGCAAGATATGAAGAATCTGAAAACATATTTGAAAACAGCAAAGTTCA
AAGTTTCAGAAAACtattattttaaatattttgaccatataaata
Run BLAST on NCBI

protein sequence of TCONS_00071931-protein

>TCONS_00071931-protein ID=TCONS_00071931-protein|Name=TCONS_00071931-protein|organism=Clytia hemisphaerica|type=polypeptide|length=662bp
MTHLLLETKEHEATVESIGSDLKKVTTITRGGKACTLINLSYFEADSTFR
RLNEIFTLLANPGLDKWFRNAITGCLRTQMAFIVDNGPGEAPSSPLVKML
LARLLNYLNLDVISQMSFAEYNSKLNYVERVHAVENDCISRHGPFSSKLK
HAECEIGDIKHRENMEEMCKQVIDCIGQGGYSGHPLTCVRGVRDEEFVFD
DEERLRKFLMLSEEGKELCDWTYKPEECPLAIHMKILWKANDCERRYIDD
YNLLTKLNTPNTNWSDKYSCILYRENDMEQNQAISRHPPQPIPDFVRWVE
TEELHYLSISKAQEINEIIPVLTQTPELFLPSRILDAVLRITLEVPSEVL
VSLALLEWVPLDDLKEFIAEKKSKQEKLINEGLELERVRRHPLYKVKKVQ
LVEKCKAEKIKHQFKKKHELVKALMKEEAPPYQPIKLEGLPSTLYQITTK
VPVSDLRFILHQNGLSTIGTKDELALRCYLKKNNKDDFISKDEVSSVMKV
IKIAKEVISEQKRMSILGFQDEITKRKNSSEVTRSKIQRPEDTNFETLAD
IFSPLETFIKSFTDPKTRDIGDTDAIMDDIEDGETGQLDNYECFFQIGAK
VKVFWKKEDVQVLGWRGGWYVAYVTDFCREEDQISVQHVSERDSIYDLEV
TSSLSDNQLKLA
Run BLAST on NCBI

transcript from alignment at scaffold_65:331386..336765+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071931 ID=TCONS_00071931|Name=TCONS_00071931|organism=Clytia hemisphaerica|type=transcript|length=5380bp|location=Sequence derived from alignment at scaffold_65:331386..336765+ (Clytia hemisphaerica)
GTTTGGGACAGCAACTCTTGTCAAACCGAATTCTAACTGCTCGCAAGAAG
AAAATGTATCTGTTAGATAATGAAAATCGTGGACGCGAACTAAAAGTCGA
CCAATTTCCTGAATTGACATCGATTCTCGAGACTTTCTTCGAGGAAGGAG
GAATGGAAGCACACCCACGGCTTACAACGACTACACTGTTCCGGCATGAA
CAAAACAATATGTTTATGCGGCAGGCAAGAGAACGTATCATGATGCATGC
CCCTGACCAGTTCAAAATAAGCCTTTCTTCTTGTTTTAATTATACAATGA
ATTATCGTGAAAACAGCCGCGCCGCAATCCAACATCATCACGGTAGAGGG
ATAAATGCTGATATATCATTAAAGAGAGCCCCGCGTGCTACTTCAAAGAA
GGTATCTTGCTTTTGCTAGCTATTTTCTAGATTTGTTCACTACCTTTCTA
CATTATCTTAAAATATATATTCCCGTGAGCTCCCGCCGAGCCCTCTATAA
TTGATTTCAAGACACCCTTTCTCCGTTATTTCTTTCAAGAGTGATGTACG
TAATGTTAATTCGAGCACGTCGCTCTTACAGATCGAGAGATAAATACTCT
TATCTGTCactcaaaaataaaattgaagttaaaATGGCCAAAGTGCAAAG
TGTTTTTGAGGACTTTCAAATCTAGCGATCGATTTTACTTTAAATCCGTC
GTTTGTGTAAAGATCATGCGCTGTGTAAAACAACGCGCGCATTCTGGATT
GGAAATTAagtagcttcatttcccatccaaaagttTCTAatcaatgggct
cttccagaaaaaatccgtacTCTGTATCTCTCAAGAAAAATAAGGTAGCT
ATTTTTTGTATTCTCTAAGGAAAAGAAAGTAgacattctttgtatttttc
aaggaagatAAGGTagaattctttgtattttccaaggaaaattaagttga
attttttgtattttccgaggaaaagaggtagttattctttgtaagATTTA
ACGTCATTTTTACTGAGCTTAATTCCACTGAATTAAAGTAATACTGTCGA
ATCTCAGAATTAAGATCCCACGAAATACGAAATATTTTGTGAATGGTCTG
ACTTATGAACTTTTCTGGCCGCTAAATTTTCTGGTATTAaggtaataata
acaataataatatcAATGCCCATGGACAAAACATCCTGATTACTCTATCC
TAACCCTCTGTTTAAGGTTATAAACGTTCACTGGGCTGCATCAAACGTGA
CTCTATTTTTGAATAGCCTTACCAACCTAGACAACACCGTCATTGATTCA
AAAGATGCAAAGAAAAATGTACCAGGTAAATTAATATTACACAGTTTTTG
TATTTATTGATTCCATCACAATTGTTTAGTAACAGATATTTTCCAAATCG
TTTTTCCACTGCTGTCTCTGACTCCTTCCTTGAGTTGTGAACATAGATGT
GACCTTTATAGTTTGGCCCTGAGCCCGGTTTGTTGCGACGTATCCGAGTG
GCTGTTAGCATAAAAGAAAGAGGACAAATTGAACGCAAGTAATGAATACC
TTAGACCCAGATTCAGCATGAAATAGTAATTCAACTATTCTATCTACCAC
GAATCTTTCATAATATATTTTTaatggtgaaaaaaaaattgtttttgtaa
aATACGTTACTAGAATAAATAACtttactttctattttttagCTGATATA
ACACCCGTGCAGAAACCTGGCAAGAGCTGGAAAAAAACCAACGCCCCTGA
TCATGATTGGGATCAGAGTAAAACTAACGCGGTTACACCCATGACACATC
TACTTTTGGAAACCAAAGAGGTACTTAACTTGAGACTCTTCAATTTGcat
ttcatataatttttactttatttccTTTTCGAATTTTGTCTGGGAATCAA
TTAAATGCATTGTATTTCCTGCTGGCAAAACAATCGGCTTGCAATTcgag
ggttgtgggttcgatccctcGGTCGCCGCCAACTCAGCGAATGAGTAGAT
TAGaatgggtaatctgatctaagcGGGTAAGtaactgggagctgagagta
ggtgtggtgCTCCACcgcagcattcgatctccctggtctagcgcaaatag
aaaatgggagactccctcactcccggctccgccgacagccatcAGATGAg
tagacttacttacttacgaaagaatgaaatgaaaagacagtaatcttgaa
tattatttttgcttttattATTACAGCATGAAGCGACGGTTGAAAGCATC
GGAAGTGATCTTAAGAAGGTGACAACCATTACTCGTGGAGGCAAAGCCTG
TACCCTCATCAATTTAAGCTATTTTGAAGCTGACTCCACTTTTCGTAGAT
TAAACGAAATCTTCACTTTGTTGGCAAACCCTGGCCTTGACAAATGGTTT
CGTAACGCCATAACAGGATGTCTCAGAACACAAATGGCTTTTATTGTAGA
CAATGGTCCTGGTGAAGCTCCGAGTAGCCCGTTGGTCAAAATGCTTCTTG
CGAGATTATTGAATTACCTTAATCTGGACGTAATTTCACAGATGTCGTTT
GCAGAGTATAATTCAAAATTAAACTATGTTGAGCGTGTGCATGCCGTAGA
AAATGATTGTATAAGTCGTCATGGACCCTTCAGTTCAAAATTGAAGCATG
CTGAATGTGAAATTGGAGACATAAAACATAGGGAAAATATGGAGGAGATG
TGCAAGCAGGTCATCGATTGCATCGGACAAGGGGGATATTCAGGCCATCC
ATTGACTTGTGTTCGTGGCGTTCGAGATGAAGAATTTGTATTCGACGATG
AAGAACGTTTGCGAAAATTCCTAATGTTATCGGAAGAAGGGAAAGAGCTT
TGCGACTGGACCTACAAGCCTGAAGAATGTCCATTAGCCATCCACATGAA
AATTCTGTGGAAAGCCAATGATTGTGAAAGGAGGTAATCTTTTTAGCATT
GAAGGATtgaacattaaaaaagaaattaattgtGCTTGGAACTTTTACTC
AATAGAGCGTCTGTATATCAGTGTACCTTTGTCTCGACTACCTGGTCTGG
AATCATTCATTTTCTTATACTTAGAAGTGTCTGAGGTCTTAATCGAGGGT
GTTAAGATGTATGATCAATTTAATTGAATAATCACTCAAATCAATAATCA
CCACTTCACTCAATCTAGATACATTGACGATTACAATTTACTGACAAAGC
TAAATACACCGAACACCAATTGGAGTGACAAATACAGTTGCATCCTTTAT
AggtattttatattatattggctttataccgggtgtttcaaaaccCGTTC
CGCAAATTTTCGTCGACTTCGGGCttagttcttttttgttttagcCTATA
GCCTAGTCTACAAAAACCTTGGCATCATTTCTACTAACAGattaaattga
taaatttttaatgacttaattCACACAATTTTACTTGTGTACTAATAATT
ATATTTATCAGGGAAAATGACATGGAACAGAATCAAGCAATCTCACGACA
TCCTCCACAGCCAATACCCGATTTTGTGCGGTGGGTGGAGACAGAAGAGC
TTCACTACTTGTCTATCTCAAAAGCACAAGAAATTAATGAAATAATTCCT
GTTCTGACGCAAACGCCGGAGCTGTTTCTACCATCCAGGATTTTGGACGC
TGTCCTTCGAATAACGTTAGAAGTGAGTGCACTAATTAACCGATTAGTAT
TTGTTAACACACGATAAAGAGCGAGCgtgctttgaaaatatttttttgtt
tttaatttatccGGGTCTGAAAGAACGTGGAAAATTCGACGTAATCAAGT
AATCGTGACTCCATTTTTTTAATTCcattaattatcattaaaataatATA
TGCATTTTAACTCGAAGTTAGTTGGGTTACgctcacaaaacaaaatacat
ATTACCATTTACTTGTCATATAAAATACACGAGGCAAATAATGAAATTAG
TCAACTGTGCTCATTTTCTTACAGACTACAAAATTTAATCAGATAATGCT
ACCATCGTTGTTGAAACTGTGTTTTGTTTACTATCGGAATATTTTAATTA
AAATAGGTACCTCATTATTTTTAAGGTCCCAAGTGAAGTTTTGGTATCGC
TAGCTCTTCTCGAATGGGTGCCTTTAGACGATCTCAAGGAATTCATTGCA
GagaagaaatcaaaacaagagAAATTGATCAATGAAGGGTTGGAATTGGA
GAGAGTCCGTAGACATCCACTGTATAAAGTTAAGAAAGTACAGCTAGTCG
AAAAATGTAAAGCGGAAAAGATCAAACATCAATTCAAAAAGAAGCATGAG
TTGGTGAAAGCATTGATGAAGGAGGAAGCGCCCCCATATCAGCCAATTAA
ACTCGAAGGTCTGCCGTCGACTTTGTATCAAATTACAACTAAAGTACCAG
TGTCCGATTTGAGGTTCATCCTTCATCAGAATGGTCTATCAACAATCGGT
ACCAAAGATGAACTCGCACTCCGCTGCTACCTCAAGAAGAACAATAAAGA
TGACTTTATATCCAAGGATGAGGTTTCAAGCGTAATGAAGGTGATCAAAA
TCGCGAAAGAAGTTATTTCGGAACAAAAACGAATGTCAATCCTTGGTTTC
CAAGATGAAATTACTAAAAGAAAAAACTCATCGGAAGTCACTCGTTCGAA
AATCCAAAGACCCGAAGATACCAATTTCGAGACCTTGGCTGATATATTTT
CCCCACTGGAAACTTTTATAAAATCGTTTACGGATCCTAAAACAAGAGAC
ATCGGGGATACTGATGCCATTATGGATGATATTGAAGATGGAGAAACTGG
ACAATTGGACAACTACGAGTGTTTTTTCCAAATTGGGGCCAAAGTCAAGG
TGTTTTGGAAGAAAGAAGACGTACAAGTGCTTGGATGGCGAGGTGGTTGG
TATGTGGCCTACGTAACGGATTTTTGTAGGGAAGAGGATCAGATATCTGT
CCAGCACGTGAGTGAGCGTGACTCAATTTATGACTTGGAAGTAACATCCT
CGTTGTCGGATAACCAACTTAAGCTAGCTTAAGTTAATTCACAGACAACC
CTATTCTGCTGATTTTCTATACATCATTTAACGAGTCAACTTCTAGCCAT
TTTGAAAAGCGTGTATAAGCCAATATAAGAAATAACAATCATGACACACC
TTTATGAGtttaagtttttgtttgttcttatgaGAAGCTTTTCAGGCTTG
ATGACCACGTCATGGGTCCATTTTGCctgtttttgccaattttcgaCCAT
TTCTAACCTTCTTTgaagggctgtaacttttggtCGAAGCAAGATATGAA
GAATCTGAAAACATATTTGAAAACAGCAAAGTTCAAAGTTTCAGAAAACt
attattttaaatattttgaccatataaata

Coding sequence (CDS) from alignment at scaffold_65:331386..336765+

>TCONS_00071931 ID=TCONS_00071931|Name=TCONS_00071931|organism=Clytia hemisphaerica|type=CDS|length=9945bp|location=Sequence derived from alignment at scaffold_65:331386..336765+ (Clytia hemisphaerica)
ATGACACATCTACTTTTGGAAACCAAAGAGCATGAAGCGACGGTTGAAAG
CATCGGAAGTGATCTTAAGAAGGTGACAACCATTACTCGTGGAGGCAAAG
CCTGTACCCTCATCAATTTAAGCTATTTTGAAGCTGACTCCACTTTTCGT
AGATTAAACGAAATCTTCACTTTGTTGGCAAACCCTGGCCTTGACAAATG
GTTTCGTAACGCCATAACAGGATGTCTCAGAACACAAATGGCTTTTATTG
TAGACAATGGTCCTGGTGAAGCTCCGAGTAGCCCGTTGGTCAAAATGCTT
CTTGCGAGATTATTGAATTACCTTAATCTGGACGTAATTTCACAGATGTC
GTTTGCAGAGTATAATTCAAAATTAAACTATGTTGAGCGTGTGCATGCCG
TAGAAAATGATTGTATAAGTCGTCATGGACCCTTCAGTTCAAAATTGAAG
CATGCTGAATGTGAAATTGGAGACATAAAACATAGGGAAAATATGGAGGA
GATGTGCAAGCAGGTCATCGATTGCATCGGACAAGGGGGATATTCAGGCC
ATCCATTGACTTGTGTTCGTGGCGTTCGAGATGAAGAATTTGTATTCGAC
GATGAAGAACGTTTGCGAAAATTCCTAATGTTATCGGAAGAAGGGAAAGA
GCTTTGCGACTGGACCTACAAGCCTGAAGAATGTCCATTAGCCATCCACA
TGAAAATTCTGTGGAAAGCCAATGATTGTGAAAGGAGATACATTGACGAT
TACAATTTACTGACAAAGCTAAATACACCGAACACCAATTGGAGTGACAA
ATACAGTTGCATCCTTTATAgGGAAAATGACATGGAACAGAATCAAGCAA
TCTCACGACATCCTCCACAGCCAATACCCGATTTTGTGCGGTGGGTGGAG
ACAGAAGAGCTTCACTACTTGTCTATCTCAAAAGCACAAGAAATTAATGA
AATAATTCCTGTTCTGACGCAAACGCCGGAGCTGTTTCTACCATCCAGGA
TTTTGGACGCTGTCCTTCGAATAACGTTAGAAGTCCCAAGTGAAGTTTTG
GTATCGCTAGCTCTTCTCGAATGGGTGCCTTTAGACGATCTCAAGGAATT
CATTGCAGagaagaaatcaaaacaagagAAATTGATCAATGAAGGGTTGG
AATTGGAGAGAGTCCGTAGACATCCACTGTATAAAGTTAAGAAAGTACAG
CTAGTCGAAAAATGTAAAGCGGAAAAGATCAAACATCAATTCAAAAAGAA
GCATGAGTTGGTGAAAGCATTGATGAAGGAGGAAGCGCCCCCATATCAGC
CAATTAAACTCGAAGGTCTGCCGTCGACTTTGTATCAAATTACAACTAAA
GTACCAGTGTCCGATTTGAGGTTCATCCTTCATCAGAATGGTCTATCAAC
AATCGGTACCAAAGATGAACTCGCACTCCGCTGCTACCTCAAGAAGAACA
ATAAAGATGACTTTATATCCAAGGATGAGGTTTCAAGCGTAATGAAGGTG
ATCAAAATCGCGAAAGAAGTTATTTCGGAACAAAAACGAATGTCAATCCT
TGGTTTCCAAGATGAAATTACTAAAAGAAAAAACTCATCGGAAGTCACTC
GTTCGAAAATCCAAAGACCCGAAGATACCAATTTCGAGACCTTGGCTGAT
ATATTTTCCCCACTGGAAACTTTTATAAAATCGTTTACGGATCCTAAAAC
AAGAGACATCGGGGATACTGATGCCATTATGGATGATATTGAAGATGGAG
AAACTGGACAATTGGACAACTACGAGTGTTTTTTCCAAATTGGGGCCAAA
GTCAAGGTGTTTTGGAAGAAAGAAGACGTACAAGTGCTTGGATGGCGAGG
TGGTTGGTATGTGGCCTACGTAACGGATTTTTGTAGGGAAGAGGATCAGA
TATCTGTCCAGCACGTGAGTGAGCGTGACTCAATTTATGACTTGGAAGTA
ACATCCTCGTTGTCGGATAACCAACTTAAGCTAGCTTAAATGACACATCT
ACTTTTGGAAACCAAAGAGCATGAAGCGACGGTTGAAAGCATCGGAAGTG
ATCTTAAGAAGGTGACAACCATTACTCGTGGAGGCAAAGCCTGTACCCTC
ATCAATTTAAGCTATTTTGAAGCTGACTCCACTTTTCGTAGATTAAACGA
AATCTTCACTTTGTTGGCAAACCCTGGCCTTGACAAATGGTTTCGTAACG
CCATAACAGGATGTCTCAGAACACAAATGGCTTTTATTGTAGACAATGGT
CCTGGTGAAGCTCCGAGTAGCCCGTTGGTCAAAATGCTTCTTGCGAGATT
ATTGAATTACCTTAATCTGGACGTAATTTCACAGATGTCGTTTGCAGAGT
ATAATTCAAAATTAAACTATGTTGAGCGTGTGCATGCCGTAGAAAATGAT
TGTATAAGTCGTCATGGACCCTTCAGTTCAAAATTGAAGCATGCTGAATG
TGAAATTGGAGACATAAAACATAGGGAAAATATGGAGGAGATGTGCAAGC
AGGTCATCGATTGCATCGGACAAGGGGGATATTCAGGCCATCCATTGACT
TGTGTTCGTGGCGTTCGAGATGAAGAATTTGTATTCGACGATGAAGAACG
TTTGCGAAAATTCCTAATGTTATCGGAAGAAGGGAAAGAGCTTTGCGACT
GGACCTACAAGCCTGAAGAATGTCCATTAGCCATCCACATGAAAATTCTG
TGGAAAGCCAATGATTGTGAAAGGAGATACATTGACGATTACAATTTACT
GACAAAGCTAAATACACCGAACACCAATTGGAGTGACAAATACAGTTGCA
TCCTTTATAgGGAAAATGACATGGAACAGAATCAAGCAATCTCACGACAT
CCTCCACAGCCAATACCCGATTTTGTGCGGTGGGTGGAGACAGAAGAGCT
TCACTACTTGTCTATCTCAAAAGCACAAGAAATTAATGAAATAATTCCTG
TTCTGACGCAAACGCCGGAGCTGTTTCTACCATCCAGGATTTTGGACGCT
GTCCTTCGAATAACGTTAGAAGTCCCAAGTGAAGTTTTGGTATCGCTAGC
TCTTCTCGAATGGGTGCCTTTAGACGATCTCAAGGAATTCATTGCAGaga
agaaatcaaaacaagagAAATTGATCAATGAAGGGTTGGAATTGGAGAGA
GTCCGTAGACATCCACTGTATAAAGTTAAGAAAGTACAGCTAGTCGAAAA
ATGTAAAGCGGAAAAGATCAAACATCAATTCAAAAAGAAGCATGAGTTGG
TGAAAGCATTGATGAAGGAGGAAGCGCCCCCATATCAGCCAATTAAACTC
GAAGGTCTGCCGTCGACTTTGTATCAAATTACAACTAAAGTACCAGTGTC
CGATTTGAGGTTCATCCTTCATCAGAATGGTCTATCAACAATCGGTACCA
AAGATGAACTCGCACTCCGCTGCTACCTCAAGAAGAACAATAAAGATGAC
TTTATATCCAAGGATGAGGTTTCAAGCGTAATGAAGGTGATCAAAATCGC
GAAAGAAGTTATTTCGGAACAAAAACGAATGTCAATCCTTGGTTTCCAAG
ATGAAATTACTAAAAGAAAAAACTCATCGGAAGTCACTCGTTCGAAAATC
CAAAGACCCGAAGATACCAATTTCGAGACCTTGGCTGATATATTTTCCCC
ACTGGAAACTTTTATAAAATCGTTTACGGATCCTAAAACAAGAGACATCG
GGGATACTGATGCCATTATGGATGATATTGAAGATGGAGAAACTGGACAA
TTGGACAACTACGAGTGTTTTTTCCAAATTGGGGCCAAAGTCAAGGTGTT
TTGGAAGAAAGAAGACGTACAAGTGCTTGGATGGCGAGGTGGTTGGTATG
TGGCCTACGTAACGGATTTTTGTAGGGAAGAGGATCAGATATCTGTCCAG
CACGTGAGTGAGCGTGACTCAATTTATGACTTGGAAGTAACATCCTCGTT
GTCGGATAACCAACTTAAGCTAGCTTAAATGACACATCTACTTTTGGAAA
CCAAAGAGCATGAAGCGACGGTTGAAAGCATCGGAAGTGATCTTAAGAAG
GTGACAACCATTACTCGTGGAGGCAAAGCCTGTACCCTCATCAATTTAAG
CTATTTTGAAGCTGACTCCACTTTTCGTAGATTAAACGAAATCTTCACTT
TGTTGGCAAACCCTGGCCTTGACAAATGGTTTCGTAACGCCATAACAGGA
TGTCTCAGAACACAAATGGCTTTTATTGTAGACAATGGTCCTGGTGAAGC
TCCGAGTAGCCCGTTGGTCAAAATGCTTCTTGCGAGATTATTGAATTACC
TTAATCTGGACGTAATTTCACAGATGTCGTTTGCAGAGTATAATTCAAAA
TTAAACTATGTTGAGCGTGTGCATGCCGTAGAAAATGATTGTATAAGTCG
TCATGGACCCTTCAGTTCAAAATTGAAGCATGCTGAATGTGAAATTGGAG
ACATAAAACATAGGGAAAATATGGAGGAGATGTGCAAGCAGGTCATCGAT
TGCATCGGACAAGGGGGATATTCAGGCCATCCATTGACTTGTGTTCGTGG
CGTTCGAGATGAAGAATTTGTATTCGACGATGAAGAACGTTTGCGAAAAT
TCCTAATGTTATCGGAAGAAGGGAAAGAGCTTTGCGACTGGACCTACAAG
CCTGAAGAATGTCCATTAGCCATCCACATGAAAATTCTGTGGAAAGCCAA
TGATTGTGAAAGGAGATACATTGACGATTACAATTTACTGACAAAGCTAA
ATACACCGAACACCAATTGGAGTGACAAATACAGTTGCATCCTTTATAgG
GAAAATGACATGGAACAGAATCAAGCAATCTCACGACATCCTCCACAGCC
AATACCCGATTTTGTGCGGTGGGTGGAGACAGAAGAGCTTCACTACTTGT
CTATCTCAAAAGCACAAGAAATTAATGAAATAATTCCTGTTCTGACGCAA
ACGCCGGAGCTGTTTCTACCATCCAGGATTTTGGACGCTGTCCTTCGAAT
AACGTTAGAAGTCCCAAGTGAAGTTTTGGTATCGCTAGCTCTTCTCGAAT
GGGTGCCTTTAGACGATCTCAAGGAATTCATTGCAGagaagaaatcaaaa
caagagAAATTGATCAATGAAGGGTTGGAATTGGAGAGAGTCCGTAGACA
TCCACTGTATAAAGTTAAGAAAGTACAGCTAGTCGAAAAATGTAAAGCGG
AAAAGATCAAACATCAATTCAAAAAGAAGCATGAGTTGGTGAAAGCATTG
ATGAAGGAGGAAGCGCCCCCATATCAGCCAATTAAACTCGAAGGTCTGCC
GTCGACTTTGTATCAAATTACAACTAAAGTACCAGTGTCCGATTTGAGGT
TCATCCTTCATCAGAATGGTCTATCAACAATCGGTACCAAAGATGAACTC
GCACTCCGCTGCTACCTCAAGAAGAACAATAAAGATGACTTTATATCCAA
GGATGAGGTTTCAAGCGTAATGAAGGTGATCAAAATCGCGAAAGAAGTTA
TTTCGGAACAAAAACGAATGTCAATCCTTGGTTTCCAAGATGAAATTACT
AAAAGAAAAAACTCATCGGAAGTCACTCGTTCGAAAATCCAAAGACCCGA
AGATACCAATTTCGAGACCTTGGCTGATATATTTTCCCCACTGGAAACTT
TTATAAAATCGTTTACGGATCCTAAAACAAGAGACATCGGGGATACTGAT
GCCATTATGGATGATATTGAAGATGGAGAAACTGGACAATTGGACAACTA
CGAGTGTTTTTTCCAAATTGGGGCCAAAGTCAAGGTGTTTTGGAAGAAAG
AAGACGTACAAGTGCTTGGATGGCGAGGTGGTTGGTATGTGGCCTACGTA
ACGGATTTTTGTAGGGAAGAGGATCAGATATCTGTCCAGCACGTGAGTGA
GCGTGACTCAATTTATGACTTGGAAGTAACATCCTCGTTGTCGGATAACC
AACTTAAGCTAGCTTAAATGACACATCTACTTTTGGAAACCAAAGAGCAT
GAAGCGACGGTTGAAAGCATCGGAAGTGATCTTAAGAAGGTGACAACCAT
TACTCGTGGAGGCAAAGCCTGTACCCTCATCAATTTAAGCTATTTTGAAG
CTGACTCCACTTTTCGTAGATTAAACGAAATCTTCACTTTGTTGGCAAAC
CCTGGCCTTGACAAATGGTTTCGTAACGCCATAACAGGATGTCTCAGAAC
ACAAATGGCTTTTATTGTAGACAATGGTCCTGGTGAAGCTCCGAGTAGCC
CGTTGGTCAAAATGCTTCTTGCGAGATTATTGAATTACCTTAATCTGGAC
GTAATTTCACAGATGTCGTTTGCAGAGTATAATTCAAAATTAAACTATGT
TGAGCGTGTGCATGCCGTAGAAAATGATTGTATAAGTCGTCATGGACCCT
TCAGTTCAAAATTGAAGCATGCTGAATGTGAAATTGGAGACATAAAACAT
AGGGAAAATATGGAGGAGATGTGCAAGCAGGTCATCGATTGCATCGGACA
AGGGGGATATTCAGGCCATCCATTGACTTGTGTTCGTGGCGTTCGAGATG
AAGAATTTGTATTCGACGATGAAGAACGTTTGCGAAAATTCCTAATGTTA
TCGGAAGAAGGGAAAGAGCTTTGCGACTGGACCTACAAGCCTGAAGAATG
TCCATTAGCCATCCACATGAAAATTCTGTGGAAAGCCAATGATTGTGAAA
GGAGATACATTGACGATTACAATTTACTGACAAAGCTAAATACACCGAAC
ACCAATTGGAGTGACAAATACAGTTGCATCCTTTATAgGGAAAATGACAT
GGAACAGAATCAAGCAATCTCACGACATCCTCCACAGCCAATACCCGATT
TTGTGCGGTGGGTGGAGACAGAAGAGCTTCACTACTTGTCTATCTCAAAA
GCACAAGAAATTAATGAAATAATTCCTGTTCTGACGCAAACGCCGGAGCT
GTTTCTACCATCCAGGATTTTGGACGCTGTCCTTCGAATAACGTTAGAAG
TCCCAAGTGAAGTTTTGGTATCGCTAGCTCTTCTCGAATGGGTGCCTTTA
GACGATCTCAAGGAATTCATTGCAGagaagaaatcaaaacaagagAAATT
GATCAATGAAGGGTTGGAATTGGAGAGAGTCCGTAGACATCCACTGTATA
AAGTTAAGAAAGTACAGCTAGTCGAAAAATGTAAAGCGGAAAAGATCAAA
CATCAATTCAAAAAGAAGCATGAGTTGGTGAAAGCATTGATGAAGGAGGA
AGCGCCCCCATATCAGCCAATTAAACTCGAAGGTCTGCCGTCGACTTTGT
ATCAAATTACAACTAAAGTACCAGTGTCCGATTTGAGGTTCATCCTTCAT
CAGAATGGTCTATCAACAATCGGTACCAAAGATGAACTCGCACTCCGCTG
CTACCTCAAGAAGAACAATAAAGATGACTTTATATCCAAGGATGAGGTTT
CAAGCGTAATGAAGGTGATCAAAATCGCGAAAGAAGTTATTTCGGAACAA
AAACGAATGTCAATCCTTGGTTTCCAAGATGAAATTACTAAAAGAAAAAA
CTCATCGGAAGTCACTCGTTCGAAAATCCAAAGACCCGAAGATACCAATT
TCGAGACCTTGGCTGATATATTTTCCCCACTGGAAACTTTTATAAAATCG
TTTACGGATCCTAAAACAAGAGACATCGGGGATACTGATGCCATTATGGA
TGATATTGAAGATGGAGAAACTGGACAATTGGACAACTACGAGTGTTTTT
TCCAAATTGGGGCCAAAGTCAAGGTGTTTTGGAAGAAAGAAGACGTACAA
GTGCTTGGATGGCGAGGTGGTTGGTATGTGGCCTACGTAACGGATTTTTG
TAGGGAAGAGGATCAGATATCTGTCCAGCACGTGAGTGAGCGTGACTCAA
TTTATGACTTGGAAGTAACATCCTCGTTGTCGGATAACCAACTTAAGCTA
GCTTAAATGACACATCTACTTTTGGAAACCAAAGAGCATGAAGCGACGGT
TGAAAGCATCGGAAGTGATCTTAAGAAGGTGACAACCATTACTCGTGGAG
GCAAAGCCTGTACCCTCATCAATTTAAGCTATTTTGAAGCTGACTCCACT
TTTCGTAGATTAAACGAAATCTTCACTTTGTTGGCAAACCCTGGCCTTGA
CAAATGGTTTCGTAACGCCATAACAGGATGTCTCAGAACACAAATGGCTT
TTATTGTAGACAATGGTCCTGGTGAAGCTCCGAGTAGCCCGTTGGTCAAA
ATGCTTCTTGCGAGATTATTGAATTACCTTAATCTGGACGTAATTTCACA
GATGTCGTTTGCAGAGTATAATTCAAAATTAAACTATGTTGAGCGTGTGC
ATGCCGTAGAAAATGATTGTATAAGTCGTCATGGACCCTTCAGTTCAAAA
TTGAAGCATGCTGAATGTGAAATTGGAGACATAAAACATAGGGAAAATAT
GGAGGAGATGTGCAAGCAGGTCATCGATTGCATCGGACAAGGGGGATATT
CAGGCCATCCATTGACTTGTGTTCGTGGCGTTCGAGATGAAGAATTTGTA
TTCGACGATGAAGAACGTTTGCGAAAATTCCTAATGTTATCGGAAGAAGG
GAAAGAGCTTTGCGACTGGACCTACAAGCCTGAAGAATGTCCATTAGCCA
TCCACATGAAAATTCTGTGGAAAGCCAATGATTGTGAAAGGAGATACATT
GACGATTACAATTTACTGACAAAGCTAAATACACCGAACACCAATTGGAG
TGACAAATACAGTTGCATCCTTTATAgGGAAAATGACATGGAACAGAATC
AAGCAATCTCACGACATCCTCCACAGCCAATACCCGATTTTGTGCGGTGG
GTGGAGACAGAAGAGCTTCACTACTTGTCTATCTCAAAAGCACAAGAAAT
TAATGAAATAATTCCTGTTCTGACGCAAACGCCGGAGCTGTTTCTACCAT
CCAGGATTTTGGACGCTGTCCTTCGAATAACGTTAGAAGTCCCAAGTGAA
GTTTTGGTATCGCTAGCTCTTCTCGAATGGGTGCCTTTAGACGATCTCAA
GGAATTCATTGCAGagaagaaatcaaaacaagagAAATTGATCAATGAAG
GGTTGGAATTGGAGAGAGTCCGTAGACATCCACTGTATAAAGTTAAGAAA
GTACAGCTAGTCGAAAAATGTAAAGCGGAAAAGATCAAACATCAATTCAA
AAAGAAGCATGAGTTGGTGAAAGCATTGATGAAGGAGGAAGCGCCCCCAT
ATCAGCCAATTAAACTCGAAGGTCTGCCGTCGACTTTGTATCAAATTACA
ACTAAAGTACCAGTGTCCGATTTGAGGTTCATCCTTCATCAGAATGGTCT
ATCAACAATCGGTACCAAAGATGAACTCGCACTCCGCTGCTACCTCAAGA
AGAACAATAAAGATGACTTTATATCCAAGGATGAGGTTTCAAGCGTAATG
AAGGTGATCAAAATCGCGAAAGAAGTTATTTCGGAACAAAAACGAATGTC
AATCCTTGGTTTCCAAGATGAAATTACTAAAAGAAAAAACTCATCGGAAG
TCACTCGTTCGAAAATCCAAAGACCCGAAGATACCAATTTCGAGACCTTG
GCTGATATATTTTCCCCACTGGAAACTTTTATAAAATCGTTTACGGATCC
TAAAACAAGAGACATCGGGGATACTGATGCCATTATGGATGATATTGAAG
ATGGAGAAACTGGACAATTGGACAACTACGAGTGTTTTTTCCAAATTGGG
GCCAAAGTCAAGGTGTTTTGGAAGAAAGAAGACGTACAAGTGCTTGGATG
GCGAGGTGGTTGGTATGTGGCCTACGTAACGGATTTTTGTAGGGAAGAGG
ATCAGATATCTGTCCAGCACGTGAGTGAGCGTGACTCAATTTATGACTTG
GAAGTAACATCCTCGTTGTCGGATAACCAACTTAAGCTAGCTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044662XLOC_044662Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071931-exon-scaffold_65-1491911889:331386..331786TCONS_00071931-exon-scaffold_65-1491911889:331386..331786Clytia hemisphaericaexon
TCONS_00071931-exon-scaffold_65-1510915933:331386..331786TCONS_00071931-exon-scaffold_65-1510915933:331386..331786Clytia hemisphaericaexon
TCONS_00071931-exon-scaffold_65-1575043694:331386..331786TCONS_00071931-exon-scaffold_65-1575043694:331386..331786Clytia hemisphaericaexon
TCONS_00071931-exon-scaffold_65-1491911889:332652..332710TCONS_00071931-exon-scaffold_65-1491911889:332652..332710Clytia hemisphaericaexon
TCONS_00071931-exon-scaffold_65-1510915933:332652..332710TCONS_00071931-exon-scaffold_65-1510915933:332652..332710Clytia hemisphaericaexon
TCONS_00071931-exon-scaffold_65-1575043694:332652..332710TCONS_00071931-exon-scaffold_65-1575043694:332652..332710Clytia hemisphaericaexon
TCONS_00071931-exon-scaffold_65-1491911889:333078..333205TCONS_00071931-exon-scaffold_65-1491911889:333078..333205Clytia hemisphaericaexon
TCONS_00071931-exon-scaffold_65-1510915933:333078..333205TCONS_00071931-exon-scaffold_65-1510915933:333078..333205Clytia hemisphaericaexon
TCONS_00071931-exon-scaffold_65-1575043694:333078..333205TCONS_00071931-exon-scaffold_65-1575043694:333078..333205Clytia hemisphaericaexon
TCONS_00071931-exon-scaffold_65-1491911889:333612..334318TCONS_00071931-exon-scaffold_65-1491911889:333612..334318Clytia hemisphaericaexon
TCONS_00071931-exon-scaffold_65-1510915933:333612..334318TCONS_00071931-exon-scaffold_65-1510915933:333612..334318Clytia hemisphaericaexon
TCONS_00071931-exon-scaffold_65-1575043694:333612..334318TCONS_00071931-exon-scaffold_65-1575043694:333612..334318Clytia hemisphaericaexon
TCONS_00071931-exon-scaffold_65-1491911889:334554..334637TCONS_00071931-exon-scaffold_65-1491911889:334554..334637Clytia hemisphaericaexon
TCONS_00071931-exon-scaffold_65-1510915933:334554..334637TCONS_00071931-exon-scaffold_65-1510915933:334554..334637Clytia hemisphaericaexon
TCONS_00071931-exon-scaffold_65-1575043694:334554..334637TCONS_00071931-exon-scaffold_65-1575043694:334554..334637Clytia hemisphaericaexon
TCONS_00071931-exon-scaffold_65-1491911889:334847..335057TCONS_00071931-exon-scaffold_65-1491911889:334847..335057Clytia hemisphaericaexon
TCONS_00071931-exon-scaffold_65-1510915933:334847..335057TCONS_00071931-exon-scaffold_65-1510915933:334847..335057Clytia hemisphaericaexon
TCONS_00071931-exon-scaffold_65-1575043694:334847..335057TCONS_00071931-exon-scaffold_65-1575043694:334847..335057Clytia hemisphaericaexon
TCONS_00071931-exon-scaffold_65-1491911889:335461..336765TCONS_00071931-exon-scaffold_65-1491911889:335461..336765Clytia hemisphaericaexon
TCONS_00071931-exon-scaffold_65-1510915933:335461..336765TCONS_00071931-exon-scaffold_65-1510915933:335461..336765Clytia hemisphaericaexon
TCONS_00071931-exon-scaffold_65-1575043694:335461..336765TCONS_00071931-exon-scaffold_65-1575043694:335461..336765Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071931-proteinTCONS_00071931-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_65supercontigscaffold_65:331386..336765 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.171709	0.0901618	0.0448657	0.0209823	0.231559	0.140755	0.339629	0.397446	0.24487	0.0689343	0.0802912	0.39397	0.307457	0.591723	2.19788	2.03002	1.06675	0.906203	0.275534	0.0881562	0.777915	0.528666	0.421952	0.286377	0.243181	0.266428	0	0.115973	0.0586411	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003034SAP_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00071931 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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