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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071927 ID=TCONS_00071927|Name=TCONS_00071927|organism=Clytia hemisphaerica|type=transcript|length=460bp
TTTATAGCCGCCATCTAGAACTAGCTCAAAGtgtgagacaaaaatggcta
taacattttgatagaattcgaattgaATTTtctgctcgttgaaaagatac
cTATAGTTAAACATGACTGCATTCTTATAgtctttattttatatttcCAG
GGAATGCAGAAGATTTGTGTAAAGCAGCGTCTGAGGATGATTTGTACGTC
ATCAAAAGGCTTGTAGCAGAAGGATTGGACGTGAACATCAAACATCCTCT
TGGTTGGtctggtatacatgctgctgcTTTCAGTGGTAACTCAAAGGCCG
TGAAATATTTGATTGAGAAAGGAGCCGATGTCAACGTCTGCGATGAGTAT
ACTTCTCCCTATAAAATCGCATCACAAAAACGAATGCATGTCTTGGATGT
TGTCATGCTGCGTGAAGAATGTTTCGACGGGTTGAAGCGGAATGCAGATT
TCAGTAAATT Run BLAST on NCBI transcript from alignment at scaffold_65:149712..151038+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071927 ID=TCONS_00071927|Name=TCONS_00071927|organism=Clytia hemisphaerica|type=transcript|length=1327bp|location=Sequence derived from alignment at scaffold_65:149712..151038+ (Clytia hemisphaerica)
TTTATAGCCGCCATCTAGAACTAGCTCAAAGtgtgagacaaaaatggcta
taacattttgatagaattcgaattgaATTTtctgctcgttgaaaagatac
cTATAGTTAAACATGACTGCATTCTTATAgtctttattttatatttcCAG
GGAATGCAGAAGATTTGTGTAAAGCAGCGTCTGAGGATGATTTGTACGTC
ATCAAAAGGTACCattcattcatcaaaatttgttttttactcCTCCCCTG
CTGCACACAGTTAAACCTTGATTTACGCTTTAACCGATGGTTGGACAGAG
GGTTTGCTCCTATAATTTATCGATGACTTGTATTTTACTGCTGCTCGATG
AATACGTCACAAGTAACATTGATAAGATCGTTTAGACTTCGTTATCTGTA
TCCCATTTTGACTAAAGCACTTCCCttgaagtttttattttctccCAAGA
ATGCTAACAGTCGCAACAAAACCATTTATCTACTACACCTTTAAAAGCAT
TTAAAATTTCTTGTGTTTTTAGGCTTGTAGCAGAAGGATTGGACGTGAAC
ATCAAACATCCTCTTGGTTGGtctggtatacatgctgctgcTTTCAGTGG
TAACTCAAAGTAATTGTTACATCACCATTTCATTCATCAAAACCTACTTT
CTCTAAAACTGTTTAGTCGTTCTTTCATATCGTAACGAACCCCATAAAAG
GCCGATGTCAACGATAATCCAAGCAATTATAAACGTTTTTTGGGGCTGAA
CCGCGACTCTTTGAAATAAACGAGAAGGGGGTTGAATTTTACAGTGGTTG
TATTTCTTCGAGCATATGCATCTATTCTAGACCGTACCTGCATTTGACTG
TATCATTTTTTAGGGCCGTGAAATATTTGATTGAGAAAGGAGCCGATGTC
AACGTCTGCGATGAGTATACTTCTCCCTATAAAATCGCATCACAAAAACG
AATGCATGTCTTGGATGGTATGTCGCTCAAACAATAGTTTAGTTCCCCGT
TTgacacttttttattaaattgtcaCGAAAGTCTGTATGAACTGGATGTT
ATACATCCAGGGAACCCTCGGAAAATTTCTGGACACCTCAAAGAATCAAA
AACTGTAACGGTTTTTTAAATAGCTGACATGTAACATGTAATACAATGTG
AACTTTATACATGAATTCTTTACTTAGTGAACAAGATTAACCCAGTCCTA
TGTAATGAAAGGTTTAAACTAGTTTTAAATTAACCTTTTAAATTAAGTGG
TTTTCCTTTCTTGTAGTTGTCATGCTGCGTGAAGAATGTTTCGACGGGTT
GAAGCGGAATGCAGATTTCAGTAAATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00071927-exon-scaffold_65-1491911889:149712..149919 | TCONS_00071927-exon-scaffold_65-1491911889:149712..149919 | Clytia hemisphaerica | exon |
| TCONS_00071927-exon-scaffold_65-1510915933:149712..149919 | TCONS_00071927-exon-scaffold_65-1510915933:149712..149919 | Clytia hemisphaerica | exon |
| TCONS_00071927-exon-scaffold_65-1575043694:149712..149919 | TCONS_00071927-exon-scaffold_65-1575043694:149712..149919 | Clytia hemisphaerica | exon |
| TCONS_00071927-exon-scaffold_65-1491911889:150234..150320 | TCONS_00071927-exon-scaffold_65-1491911889:150234..150320 | Clytia hemisphaerica | exon |
| TCONS_00071927-exon-scaffold_65-1510915933:150234..150320 | TCONS_00071927-exon-scaffold_65-1510915933:150234..150320 | Clytia hemisphaerica | exon |
| TCONS_00071927-exon-scaffold_65-1575043694:150234..150320 | TCONS_00071927-exon-scaffold_65-1575043694:150234..150320 | Clytia hemisphaerica | exon |
| TCONS_00071927-exon-scaffold_65-1491911889:150575..150678 | TCONS_00071927-exon-scaffold_65-1491911889:150575..150678 | Clytia hemisphaerica | exon |
| TCONS_00071927-exon-scaffold_65-1510915933:150575..150678 | TCONS_00071927-exon-scaffold_65-1510915933:150575..150678 | Clytia hemisphaerica | exon |
| TCONS_00071927-exon-scaffold_65-1575043694:150575..150678 | TCONS_00071927-exon-scaffold_65-1575043694:150575..150678 | Clytia hemisphaerica | exon |
| TCONS_00071927-exon-scaffold_65-1491911889:150978..151038 | TCONS_00071927-exon-scaffold_65-1491911889:150978..151038 | Clytia hemisphaerica | exon |
| TCONS_00071927-exon-scaffold_65-1510915933:150978..151038 | TCONS_00071927-exon-scaffold_65-1510915933:150978..151038 | Clytia hemisphaerica | exon |
| TCONS_00071927-exon-scaffold_65-1575043694:150978..151038 | TCONS_00071927-exon-scaffold_65-1575043694:150978..151038 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_65 | supercontig | scaffold_65:149712..151038 + |
Blast
The following BLAST results are available for this feature:
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