TCONS_00071922 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071922
Unique NameTCONS_00071922
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1640

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071922 ID=TCONS_00071922|Name=TCONS_00071922|organism=Clytia hemisphaerica|type=transcript|length=1640bp
ATACTAAAGGACGAATAGAAAAACCGAGAATCATACATTCCCTTGGAAAT
GCTGTAAAGATTTAAGCTGAGGAGACGGAAACACGTGTACTGTACGAAGA
TTTTGTGCAGCCACTACAATGGATCACCTTGGTTTATCTTTCCTGCTTTT
GACTTGTTTTTGGAGACCTACATTTTCGGACAATGCAGACAGTTTTGCAC
ATGCGCAAGAGATGTTCGAACAACGTCTTCGAATGCATAGTCGACATCAC
TGGAATAATTTATCGTTAAAGAGAATCCATAAAGCAAGACGAAGGAATGC
CACTTGTATGGATGGTTCAGATGCACGTTACTACCTGAGCAGACAGTGGG
AATCCAATAATTGGGTCATTCATCTCCAAGGAGGAGGGAGTTGCATCACT
TTTGACGAATGCAGATCGCGTTCTGAAGGCCCACTTGGTTCTTCTCTCCC
CCTCGATGCTCATATCACTGGTGAATGGACACTCTCCAATGACCCGAAGA
TCAATCCAACTTTTCATAAGTGGAATAAAGTCCTCATTCCGTACTGCAGT
GGAGATGTGTTTGTTGGCAGGATGTTGAAGAAAAACCATCCATACCGGTT
ACCAATGCTCGGTCATTACATCTTTACTGCGGTCATTGAAGACCTCGTTC
GACTTTACAAGATCAATAAGAAGAAAACGAAGATTCTGTTTGGAGGAACG
TCAGCAGGAGGAGTTGGTGTTTTGGCCAATGCTGACTATCTTCAAGAAAT
GACAACACCTGCCAAGGTGCGAGCTTACAATGATGGTGGATGGTTTACAT
TGTTCAGAAGTTTCGGAGAGAAACACAATACAAATCTTCCACAATTCTTT
CACACTTTGGCTACATTATTCGAGAAACATTGGGATGGTTTTGCGGATAA
AACATGTCAAAAACACATGCCCAAATCTGCTGCCTGTCTTTACGGTGAAC
TTGCCATCCAGTACGTGAAAACGCCAATGTTTGTGATGACGTCGATGTGG
GATTTGTACCAACTCAATCAAATGGTGCCAAGAAGTTCGCCAGTCATTCA
TCTACCTCCTAAATTGAACCAAGAAACTAAATATCTGGAATCGTTTGCTA
ATAATAGTTATCGCTCCATCACTGGGttaTTGAAGAAGCCGAAGAATGGA
GTATTTTCACCGGCATGTTATTCTCACATCTTTTTCACCAATTGTATCGG
TGGAATCATTTGTGGTGCTCCAAAGAAAACCGTATACTCTTCTGGAGGTC
AGACAGCTTACGGTGCTTTAACAGACTGGTATCTTACAGATGGTGCTGAA
GGGTCGTACATTGACGACATAATCGAGTCGCCTACATGTAACCCTAGTTG
TTGCACACAACATTGTCACAAATGTAAAAGTTTGAATGATATTTTACACG
GCACTGAAAATGGACACACGAACTTAGTATACCGACATCGAAAACGTAAG
AAAGAGACAAATACCAAGAATGAAGTCGAACAAAACCATGATAATCAAAA
TAATTAtcaaagatttgtttattaTTCTAAAAGTTATACTTTGAATCCAC
ATCCATTGGTGATGTATGCCTTGATGTCGATGGTAGGTCAGATATGGCTG
CAACTAAGGGTATAGCATGTTAAGAGTTAACAATGGCAAG
Run BLAST on NCBI

transcript from alignment at scaffold_65:101276..115584+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071922 ID=TCONS_00071922|Name=TCONS_00071922|organism=Clytia hemisphaerica|type=transcript|length=14309bp|location=Sequence derived from alignment at scaffold_65:101276..115584+ (Clytia hemisphaerica)
ATACTAAAGGTTAGTTGTATCTCGACTTCTTCTTTATgctttaacatttt
taaaaattttattttagatttttaatctGATACAACGGTCCTTGGAAAAA
GACTTTCAGTGACTTTGTACAACAAGTGCAGTGATTAAATCTATGCCTTA
TTCATTACTTTATTTATAAATAAGTTCCTTGTTTTAAATGAAACATCCTG
TGTGCTTGCAGGAAACTCATACCAAACCATAACAAATATTGTGATTTGAG
ATGAGATTTTCCCACAATCACTATCACAGAGTTAAAAGCAAGTGGCGTTA
ATAACAGAACTTGACATGGCCTTCATTGACATCAAAAGGATCCGGTCGAT
CTATCTTTACTGAAACTAATCCCTCCCATTCACCTATATTCATCTCACAC
CCTTTTTCGTCATTATAATTGCTGTCAAAGCCAATTAAATATTGCTAAAA
TGGTATTGGATAAGGCTTGTTTTTGAATTGGTGCTTACTTAGGCTTTATT
AAGCTGATAATGGAGTAATTCAATAGATGATAATCTTGACTTGACGTATT
TAGAGATGTCAATAGTCCTCTTGATTATCTAGCTCTGATTACAAGAAGTT
GAGTTGCTTCTTGAGTGTGCTGTGGTGTACTACTTGATAAATAGGCCACC
ATGAGAAAGACAAGAGTTTGTGAAGCAAGTGGAATTTATTCCACACAACC
ATCTGACCTAATGAATATAGTCATGATTTTAAATTTGTCCTACTCTCTAT
AGCATACTTCATATTTGCTCTTTCTAGTTTTAAGTTAAGGCTAGGAAAAC
AGTTTTCTAGCAAGGCTGTCCTCGTAAATGAAAGAGCTTTTTACTTTCTA
CCTCCAGGCATTTTGTAACTTGCTACCTTGCTTTGCTTGAAGTTAAAAGC
TATCTATGAAAACGATTTTTGTATTGTATTCAAGTTTTAGATTGGTTCTA
ATGAAGTGTGGTTTAGGTGTTACGATAAAGTCTTCAATCTGTCCTACGCG
TACCTTATTGTATGCAGTTATACAGAGCACCTCACTGGAGATGGCTATCT
TATGGACGGATTCTTTTACTTGCAGACGTTTTGTACTTGTAACATCAACT
ATATGATAAAAAGGTGTAATTTATATAGAGATGTTAATTTTCACGTTTGA
GTGTTTGATTTCATAAGTCTTGATATGTTAATATGTTGACTGTTTACATT
CTGATTATCACTTTCTCACATTCAATGAGAGACGGGTAGCCACTTCGGAT
GATATTACAATCACTTCTTACTTTCCGAGGTGTTGCTTTCTGTAAGTTTC
TACCATGGTGTATTGAAGAGAAACGTTATTTTAAAGCGGCTGCTAGtctc
atttgaaatattttctttcgcCCATCTTATAAACACTCAAGGAAAAAGAG
CATCGTAAGAATTACTCACGTTTCTCGagctgaaaatttcactttcagaC
TTTCTGTTTCGAAGATTTTTTTACGTATTTTGCGATCAGTAACACCTTGA
AAAAGGAACTTTATCTGTGAATGTGTTATTTTCGTCACAAGATGCGGTAC
TTTTTAAGTGGTATATAAGTAATAAGTGGTCCTTGAAATTGCACtcaatg
aaaaaactttttgctcaATTCCGCAAATACATAACACCCTCTCGATTTAG
CGTGATTTTAATCCAACCCTGAGCTGTTTTTACGCTACTTAAATCGCTTC
TAGACCATGAGCACTATTCAAGTgacttatttaaaaaatgaattgtTCTT
ACCGCACCCTCATTTCTCAATAAAACTTGTGTGTTGTTTAGATCCTTTCG
AAAAAACTACAAAAAGGTTAAACTTGGTGTGGTGAGCTGCGGTGGTTCAT
TCTTGGCGATTATTTGAATCTGCAAAGAAACTATTTACCTCTCTCCAGTT
CTCAGTTTTGGGGTTTAGAAAGGGTTATCAAACTGGAAATGTTCGAGAAC
TGTTTAGTCAATGCATGAGTCAAGTTAAGTTCTTCGCATCGGTAATCACT
TGTCTCCCTCTCCCTCAATCAACAGTTTATTTTAAAGTGCCAAGCAGGTG
AGAATGATAGAAAAAATGATCAATGGTGAGTTTTATAGAGCTAAACGTTC
ATGAAATGATATCTTCGATGATTACGTAATGAAATTGTTGTTAAATTATG
ATAGAAAGTGACACTTCAATTTATCAAAGTGATATCCCTTTGAACTTATA
AGTGGCTGATCTATAAGTGCTTCAAAAGTCTGAAGTTATAAGCTGATAAA
GTTGATGATGATTTTGTATAGCTTACTCTACGCAATGATTTATGATAGTT
TAAGGTTTAGTTCACATCCTTTGATACTTAATATGACTTTAGTGAAGTCA
GCTCAAAGAGTTATACTTTGTATTTTGACAATTTCAATAGATAGCTGGTA
CATTGGTACAGTGTTACCCTTTGGagcttgtttttatttcttaaacTTCG
ATTGATTGAATTGAGTGACTGGCTAACTTACCGATAAGCTGCTGGAAACG
CCACACTTCATGGCATGGTGACAAGATTTGTTTTAGTCATCAGCAGTTCA
GTGAATTTAGTGTTTGTTGCAGTATGATGTTATAGATCTTTGGCGATTTC
GGAAAAAATGTGGTTTTGTCTTCCTTTGATGGTTTTGGATCTAGGTTATG
ATTATTTTGCCACTCTACTTTCGAGGAtgaaagtttttgtaaaaaccATT
TCATTTCAAACGAACGGCTAATATCCATTAGTATTGTTTACAAACAGATT
TACAGGATTCCAACTTCATAGAAAAAGCGCTCCACGTTTTTCAGTTGTTT
GCGTTTGACTTCGTTTACTTTTGTCACACACAACAAATGTCATTTAGGAA
GCTCATaaacaaggaaaattttaattttttttcgttacAGCTTTAGAGAA
GTGATTACTTTAAAACAAGGAATAGAATGGGATATTTTTCATTGACTTGC
TGCTTTTGCATTTATACAAAACGAATTCATTCTCACATGAGTGACCATAT
AGTTAGCATGAGAGATATGTTTTGATTATGCTGTATTAATTTCTTTTCTG
CGAAGTcgattattgtttttttttagggACGGGTTTGAAATTCATTTCCA
AACCGCTAATTTTCACTTAGGAGGTGCTAAAAGATAGCATTGTAGTTTCA
TGGAATCGTTTCCATCATAGTTTCTCGATAGAAATATTTGTCAGATAGTA
TTTAATTTCCCATTGAACTGAGTATACTATATAAAAGTGAGTGAAGGCTT
TGTGCCGCCCTATTTTTGAAGGTGGTCGTCTGAAATTGAGGTAAAACATC
GAACGTTGGAGAGTTTATGGTGATTTTAAAAATCTCTGCATAGCGTTGAA
cgtatttttattttaagtgtCTCTAATAACACCGCAATCTCTCCCTTATT
GCAAGTTGCTGATGCGGATCTAAATCACGCGAGAAAAAAACGTTTGAATG
TGTAATTCGTTCAAAAGTGACGTTCAAATTTCACATGTTGAGAAAAGACT
TAGGAACCCTGAAGAAGCCTGCAGGAGGCTGGGGGAGACCTATCATATGC
AaagaaaattctcattttatgATTATGAGACATATCTTATCTCAAATAGT
ATCAGTGAAAGGGCTTTCATGTGTCTTCGTTATCAGTGTCATCGTTGTGT
TAAGTGATCGCTTATCTCACGTCTCACTATGCATGAGTATCGTTCAACAT
TTTCCCAGCATGCAATGTACCGTGACACCAACACTTTGAAAGATTTAACC
AACCTTTCTGTCTGCTTTAACGAAAACTGACTGACGTTTTCGCACCATTT
TGACTCGGGAAGCGTTACATTTCACAACTTATAGTATATTGGTGTCTGAT
ACAGTAGCTTCCTTGTCACGTGTCACTCGGAACTCGAGAATATATTGTAT
TTTTCTAGATTGTCTTTTTCGTGGGTATGCTTTATTCAAATCTCGGACAC
CTTGGTCTGGTCTGTACTTTTCAAAACTCAAATCTCAGTTTTGTATGAAT
ATTCGAGAGGAATTTATTGGTTTTCGTTCACTTTAGCGTATTGTAATCAT
TTTGGTTGGAAATGGTATAGTGAAGCTAACATTTGAGAGCGAGTTctcaa
aaattcttcaaatccTTTAACGGGAAGAActaaagactttgaaaatacGT
ACGGAAGGAAGAAAGTTAAAAGCCGCTTATTCCCTACCAAAGTTTGACAA
GTTTGACAGTGAGTATCTTTAAACGACTTCACACTATCAAGTCATAAATA
TGTTTATTATCGCTATTAAGTTTACCGGAGGTCTTTGTCCATTTAAAGGG
GCGTTATTTTTAATTACACCTAAAGAAATTCGCGTGATAATTTCCCTCCC
CTTTGATTAGTGTCTTTTCCCGTTTAGCTGACATCATGAATAGTGTACTC
GCTTAAAAAGGGCAGGTGAATAGTTTTCTTTGTCATTCATCGACAACAAG
GTTGAAATCTTTGGCACCTCTGAAAGCTAGGGTAAGCACTACGATGTTTG
cttcttttatattttaaagcatttcatttgtttttttggatGAATTTTCC
ATATGATTTATTCATAGTGGTGTATATGAGAAaagaatttccaaattttt
cacGGCTTTGAGTTTTGCATCATTTCAGACGGTCTTTTAGTTCAATTTAG
CCCTTCTATAATGTTATTTTCAAATGGTCAACAAATGTTTTATTAAAGTG
AACCAGTGACTGAACATCGCTTCATTCAAAGTGAGATTTCATCAGTGCTT
TCAAGCTACATTCCACGAGGAAGATATTCCAGCTCAAATGATATCAAATG
GGAAACTTTAATCGGAAAACTATAATCGGTTATTTCTGGTGTCAAACAAC
CTTCGAACAGACTCTCTAATCCTCCTAAAGGAAGTCGCTCTCTATTTCAA
AACATCTTTTCTATCTACAAAACGTCTTAGCTGAAAACCCCTCATTCGAA
ACCGCCGACATTTGTAGACTATCCACCGTGAACCTTACCATCGATTTTCC
TTCTTGAAGttgtttttttcctttctttaggTGTACCGACTTGTCTTTGG
AAACCTTTTTATCTTCAGATATCtattacacgttttctttttttataaga
acaaactatataagaacataagacttcgctggctaaaatgttaaaaacaa
gttaagaacattttaaggctttgtggactcaaaaacaccctatttcttat
gaaaatggtcagaaatattcacaaaatggtcaaaataagaacatgttaag
aatatttttaggcttaaaactcaaaaaatttagaccatccgaaggcttca
aaaattttggatgttcttataaaaaaaacttgtatggGGAATCTTGTTTC
GCTCTAGCAGATTTTGGTAATACACTGCAGTGCTTTTGGAAAGAACTTCG
CCTGATGAAAAAAGTTGATAGACTGTATTCAACTTTTTCGATGTTATTGT
TCATTTTCGCCCCTCAATACTGTAGAGTAGACAACAGGGAGAGTCAACGT
AGTGTAGATAAACTGAATTTGAACATATGAGTTGCGTGAAGTGTCGTcac
cataactcgaacatgcacggggagcacaaatttgttcgacCTAAGTGAAT
TTCGAGTTacggagtaaggtttataaggtattgttaactgaagggaccat
tcATAAAACTTATTAAACTGTATTTTAGGAGCTGTAATTTTCTTCGTTGT
AGCTTTTCTCACAGCTGTATATCGTATATTGATTTGTATGGTGCGTTTAG
AACGCCATGATCGCTCGTCATTAATTGCATGCCATGAGTGTAATTATTTC
TCTGCTTTATTTATAATTGTCAATAGGTCATTATGTAGAAATGAAGCTAA
TTCATTCTTGTCTCTCCgccttttgttttgtttatgatattctttttttt
attatattgaaTGGTTGTTGTTATTTGCCATGTGTGTGTTGTTTGTGGTG
ATGGCTGGAAGTGTTGAATCAGGTTGTGAAGTATTGCTATAGAATCTCAA
TATCACGAgttgaattttaaatttaaggttttgtttttaaataagagtaa
tatcgtttgcttacccATCAATTTTTATTCACAAGTTTGGATTGATacgt
atgtggagcaagattgatcagaaagcggaaaagaaaaatattttttgcgt
atatcagcacaatataacaataggcagacattgtcctgatatgaaatgtg
tgtctaatatgaaacgggaacacttatataaaaataaaacctttaatatc
GATTTCATTTGATCCACCATTCACCCAGGCTGTTTTGAAACTCTATTTTT
TGAGTTATAGTGATATTGCTGTTATTTGTACCAATCAGAATAGAGACAAG
AATATCCTGCCACGTGAATGCAATATCTTTTACGTTGAGTCAGAAGGGTA
TATTTATACGCCATTAAAAATGTTATTCAATACTGATTTTGACATCTCTT
CACGTTCCTTCTAATCCTTCAAAAGGGGAACGGTATCCGACATTACGGAC
ACCATCTTGAAAGTGTGAAGTGTTTAGAAACACAACAGAATCACAAAAGA
GTTGTTAATCTTCCCATTCATTTCTGCATTTCAAGTCTTCGTCAATCTCG
TGAGATGCATGTTGCGAATGCGTATCGTttactcaatttgagggtgTGAA
TCCGATATGGTTCTAttgaacttttaatttttctttggattgatCTTGGT
TCGAACGTGCGTGGTATGTATCTTTGGTActcctttttctttctccatTT
CTTGGCTTCTTTTATAAGAGATTTACGCAGATTTTTGGTTTTGACTTTTG
CCAGCTCGCTGGTTAGCGGCTTCTTTGATGTTAAATTGTTTTCGTAATCT
CATTTTTATTGACGTTGGTATGGGCTCGTACTTTGCCAGACTTTCCTTTT
TCTCTTATATGTGGTTGTCAAATGTAGATTGATCGGCATTCGGACTTCAA
CAACAGACCAGTATTTGCAAACTAGATGTTTTCATATTATTCTAGCTTTG
TAAAATACTCAGCGCTCTTGTTATCATGTTCCTTGGTAAAAGTTTCAAAT
GACGAACAGGGAAAACAGAATATGGCGTGCCTTAATTGGACTATTTAAAA
AACCTTCAAAACGACTTTGCGGTCGAAATGTAGTTGTATTAGGCTGTGAT
AGGTCTAATTCAATGTTTGCGCAATTTGTagacaatttcatttcatttat
tgGTTAGCAACTAATTTTTGTGGCTGTAGTTTTCTACTTTAGTCGCTACT
TGCAATATTTCAAGATTACTTAATATCTTCATGCCGCTATTTCTATGCTA
CTggtcatttttgagaaattttttgaatgtaCTGTTTTTCTCAAAAGCTT
TGTATAATAATTTTAAAGGTGAATCTTCAATCTTTCTTAAGCAGTGAAGC
CTTAGGCTTAGCGCCGCATTTTATTGAATTaagcactttctttgtttcgc
GTGGATTATTCTTTGAAATTTGCCGatggattttattttcaagctgTGGT
TTTGTGGAGACAACGCGGGTTGtacgttttggatgggaaataattgGCTT
CATTTCCCGTGCACGGGTTTCCCCTGTTTTAAAACGCATAGGTTTCATCA
TCCCATTCACCAATAGTCCAATATGGCTACTTTGTATCTGAAACCACCAT
ACTGGTTATAGTGGTGTATTGAATTTCTAGTACAATGTTATTTTTAGCAG
ACAGTCATTGAATAGTGATACCTTTAACACATTTTTGGTATTTCACGCCT
CATTTGAAGTCGCCCAAAAATGTCAGAAGGTTTCCTGTTGAGAGCCATGC
TAAACGATGACGATCGTTTGGTTCTCCCTTCGGTTTAAAGTGTAAGaatg
ttcaaaaaatataattcttaTCAATCGGTTACACATGTTTAGAGCTTGTT
GACTTgtttgtttcaaagtttttgttgtttgttgtatttccagaaaatca
aaaaaaattgcaaaactcAAAGCTCAAGCAAACAACTTTTACTCTGTTTT
AGATTCTGTTTCATTTGGTAAttataaaagatattttaccaCAATATTTT
ATAGTAAGCCATCAGTTCACTTAGTGACCATGAATGAAGTTAATGGTCAT
GAAATCAAATCTATGTAGTCAGGATGTTTCAGAAGGTTCTAATAGATAAA
AACCTGTCGTTTTCCGTTCCCAGGTTATGAACAACCAGTCGAAGCTTACT
AACAAACGTCGATGTCTAAATAATAACCTCAGCTTGCTTTTACTTGCTTC
taagaaaaaactgttttaGATTTAAATGGATACACCATTTTAGACCGGTG
TGTTTTGACGCATTTTTACCATTAGAAAATAGTTCGcttagaatggcttc
attttctgaaaattgccGGATTTTGAACTTCGAGCGATAATGATATATAA
GGTCATTTCCATCTGGAAAATGgtaatttcattgaaaaaaagttgatttt
ttgaaatgcagaatttaaaCTCTTATAAAGAAAGGTTGAAAAGTTCTTAC
AAAATCATTTCAGCAAATCTTTGGTCTAACTGTCATCACGCTAATAGAGA
GAGCGACACAGAGCagagaaaaatgacaaaaaggaaaGATAAGATCGCTT
AATAACTGATTAAGCCATTGTCTCAGAAAAAACACAAACTTTCATGAAAC
ATTATGCTAAACTGAAGTAACTTAGTTGAAACTCTATTTCTTTGTAATTT
GTGGAAAGTCGGTGAACGTTAGGGAAACCACCAAGCTCCCTTGATGTTTA
TGTTCATGAATATTTCATTCAGTTCGGATAATTCGATTATCTTTTGGTTG
GACTCGCGAGCGGCCTACTATACAGGGGATCAAAGACCTTAAGAAGGGGT
TTCAACTTATTGTGTGTGGGGTTGTATAGATCTCACTTATGACGAATAGA
CCTTAGTCTCATTTGCTTTGAAAACACTATCAATCATCATATCAATATAT
AAGGAATGACAAAACTTTATTGCAGGGCACAAAATTGTCTGATTATAATT
TGCTACAGTACTGTAAACATCAAATGATGAACTTCATTATGATGGCTTCT
TGTTGACCTCTGTTATTTTTCTATGTATCCATTCTTAGGGAATGGTCGAT
TCTAGGGGGgagtctcaaaaaaaattcatgtctTTAGGGGGGTCTATATT
AGGAGGGGGTGATAAAAATATATTGACTGGTTAGGGGGGggcttgaaatt
tttttgaggatATCAAGGGGGagtggaaatttttgaaaatatccttCGCC
CCACCTTAGtggatactttctgaccactcttTATTTCTCTTCAGGACGAA
TAGAAAAACCGAGAATCATACATTCCCTTGGAAATGCTGTAAAGATTTAA
GCTGAGGAGACGGAAACACGTGTACTGTACGAAGATTTTGTGCAGCCACT
ACAATGGATCACCTTGGTTTATCTTTCCTGCTTTTGACTTGTTTTTGGAG
ACCTACATTTTCGGACAATGCAGACAGTTTTGCACATGCGCAAGAGATGT
TCGAACAACGTCTTCGAATGCATAGTCGACATCACTGGAATAATTTATCG
TTAAAGAGAATCCATAAAGCAAGACGAAGGAATGCCACTTGTATGGGTAA
GCGAAATTTTTTGTCTTGTTTATGTGGAAAGTTAACTACAATCTGTGACT
AAATATTGTGGCAAGAATCCCCTCCCTAGTATCAATCTTAATGGGTGGAA
AAGAGCCACCATGCTCAGAAAAAGCTCACATTAACActgatattaggggg
ggggattttcaagaaattgccacatattttgtcactgattttAGTTTCTA
GCCGTCATCCCCGCCGTCATCTCTCCACTGTGGTTTAATAGCGAGTTTAA
GTATCTACATTTTTCAGGACGATTGTTAGTGACTGAAATGATTTGGAACA
ACCCGCAGGTTAACCCCCAGTCAATCAGGATATAAGCTAActgtctccgt
cgcagaaagacaccgatacataaactcgctaataccTTTCAGTGCTTTTA
GAGGAAAGAATCAGCTAGCTTCTTTTTCCCTCCTTTTTTGCTGCTGCCTG
TTGCATAACCTTAGAGAAGGGACAATATACCTAAGCTTAACATACTTCTA
GAcctcaattttttttgcattttcaaatGAATGGGTGAGAAAGTATAATT
TTGCTCTGAGTGTTGTATTAGATCATTCAACAACAAGTTTTGATCGAAAA
CGGAATGGAAATGGGTTTCATGAAAGTAACCCTGATCTGACTTTCTTTAT
AATTAAAACATTGTCATTTTTCATTCTCTTTGACCAGAAAACAAAGCCGC
TCCTCAACTTCTTTAACGGTCTTAGCAAATTAAATCAGAGGATTATAACA
TAACAAAAACCTTTATTAATCAGCCTCGCTTTCAAAACAATCTTAATTTT
GTGGGTTTTCAGAACTTTAAGTTCCGCGTTTTGTTTGTGGTGAGCAATCG
AACTCTTTGAAGTATCGATTGTATATCGTCACTTAGTGACGAAAAAGCTC
GGGTAAAGCACGTTCTCCAATTGGTTTCCGAAAATTTGAAATGGGGATTT
ATTGAGCTTATTAAAGTTCCCTTCAGCGAAATCAATTACCATATACCAGT
ACCTTATAGTCGAACTTCAAATATTTATAGCTCGAGAAACTGCCCTCTTA
TACTTAATCTAAATCCAGAAATGccaatgaaaaaacttttagttTCTTCA
CAAACGGTTTATTCTTCTTTGCTCTCCATAGATGGTTCAGATGCACGTTA
CTACCTGAGCAGACAGTGGGAATCCAATAATTGGGTCATTCATCTCCAAG
GAGGAGGGAGTTGCATCACTTTTGACGAATGCAGATCGCGTTCTGAAGGC
CCACTTGGTTCTTCTCTCCCCCTCGATGCTCATATCACTGGTGAATGGAC
ACTCTCCAATGACCCGAAGATCAATCCAACTTTTCATAAGTGGAATAAAG
TCCTCATTCCGTACTGCAGGTAACAAACTTGACCTTCTTTACTTACATTT
TCTTTTCCTTTGTAAATATAAAAATCCCAAAAGTCCCTGCTAGAGGATAT
CTTTATTGTGTTGGCCTTCGTCAAATGAGCATGACTGGGTTCAATTAAAA
CAGTGTCCATCTCGGATAACCTACTCTTTGTAAAATACCGCCTTTACCGT
TCAAATTTGCAGCCGCAAGCACTGTAATTATTTGCAGTTTTTCATTTCTC
CATAATCCATTTATAGTGGAGATGTGTTTGTTGGCAGGATGTTGAAGAAA
AACCATCCATACCGGTTACCAATGCTCGGTCATTACATCTTTACTGCGGT
CATTGAAGACCTCGTTCGACTTTACAAGATCAATAAGAAGAAAACGAAGG
TAAGTGCagtgaaatgaaaagttttacTTTCTTTTCAAGAACTTGTTTTT
GGTCTTTCGGACTTTATGTAGCCTGAAGACCGATGTAATGGCCAGAAtta
attttgttctttttaacCTAGAAATTAATGTTAGCGCAACAAACAAGAGG
TTTGAGGATCTATTCCCCGGTGTTCAATTCATAATTAACCGAGCCGGATG
GTCGTAGACCCTGTGAAAACGTCTAAAAGTCCTAAAATACTgggtaaaat
atcgactctatctagcTCGTCCTCcattttaaattcaaactttaaagtca
atttcattgttttatctTCAGATTCTGTTTGGAGGAACGTCAGCAGGAGG
AGTTGGTGTTTTGGCCAATGCTGACTATCTTCAAGAAATGACAACACCTG
CCAAGGTAGGTTCCACCGATTCCCTCCCATTCTAACAATGCAATTTGAAA
TgcacaaaatgaaaaatcactCAGATCGTTAAAATGAGACTGACTTTAAA
ATGAGATGTGACGTAACCTGAGAACTTAGAAatttaggtttttgaaaaag
aacctTAGAGATCAAAGATTTATGATTGTCATGGTAATCTTCATTTCCAA
TCCAGGTGCGAGCTTACAATGATGGTGGATGGTTTACATTGTTCAGAAGT
TTCGGAGAGAAACACAATACAAATCTTCCACAATTCTTTCACACTTTGGC
TACAGTGAGTATCAGAACTGTTTTCTATTTAattgaaacaaaacattaaG
CATATTTATACAGAAACAAAGGTTTCGATTTGTAGATCGGCAGTATCAAA
TGCTATTTGTAGATCAATGAAAATTTAGCACGAATTaggtttaaaatgct
taaatcttttgaaagattttgtcaattttagaaAGAAGATAAATGATCTC
AACTTGAATGGAGAACCCTTGACCACGTTTTCATTTCTCTTTGCCGGAAA
CAAAATTCGTATAATTGACAATCTTCTTATGATCTTACTTTCAGTTATTC
GAGAAACATTGGGATGGTTTTGCGGATAAAACATGTCAAAAACACATGCC
CAAATCTGCTGCCTGTCTTTACGGTGAACTTGGTAAGCAGCtctcttttt
cttgctttttcaaCGTGTATTCGAAATCATGAAATGTTCTTTAGAGGTCA
CTCTTATACAAATGTAAGAATTTTGATAGGAATTAAATTTGGCCATCCAC
TATGATTTGACTATGGCGAATGGCCAAAAATTTGTAATTTAATTTGATGG
GATTTAATTTAGCATTTGCAGGATTTAACTTAAAAACTGTTTCCCGAATT
CGGGAAATGCAGGAAATTTGATTTGATGGATTTCGAGTAAATTTCGGGAA
AATCCATCAAATCCGTCAAATTTCGCCGTATGacccaaatatttttttat
gggTTTAAACAACTGAAAAGAGTAAATATTTTACGGTAGTTATcatcaaa
aagctgaaaaatatcAATCAGCTTAATCTTTTTTTTGCGAGGGTGCATTT
TAACTGACCAATCAAATGCTCTCATTTAAGCCATCCAGTACGTGAAAACG
CCAATGTTTGTGATGACGTCGATGTGGGATTTGTACCAACTCAATCAAAT
GGTGCCAAGAAGTTCGCCAGTCATTCATCTACCTCCTAAATTGAACCAAG
AAACTAAATATCTGGAATCGTTTGCTAATAATAGTTATCGCTCCATCACT
GGGGTAAGATTTAAAAGATACTACAGCTCTAATATCTCAGCATGCCTTCT
CTCATCAGAGGTTAAGGCTGAATAGTAATCCCAATGGATCGTACATTTTT
GGTGTACTGGCCTCAAAAAACTATCGGCTGTAAATGAACCCGTAGATACG
GAAATGTACGTGTTATGCAGTCTTCTCTGATACTGAGTACAAAATGTCCA
GGTTTCGGTCCCAAATTTTCTTTGAAGGGATACGGTTTTATTTACATtct
aatttgaaaatcaaacttttcatttttcagttaTTGAAGAAGCCGAAGAA
TGGAGTATTTTCACCGGCATGTTATTCTCACATCTTTTTCACCAATTGTA
TCGGTGGAATCATTTGTGGTGCTCCAAAGAAAACCGTATACTCTTCTGGA
GGTAAGACATATTTTGATCACATTTTCTCGCATTCTGGCAAGAATGATCT
GTAACATTATTGTCAACAAAAAGTCACACATTTGTCCCGATCAATGCCTT
TTACGCCAAATTATGCATGTTCGTTGTtaaaatacgcattattagcgctt
ctttggtGCCAGTAATGTTTTAACAGTagttatttgatatttttcgagtt
tttctcaaaaatatttcgtGGATAAGGCCTTTCCAGATTTCCATTgcgac
ttaatttcgcggatgggaCCCAAATCCCTggaatccgcgaaatttaaacC
CGCGAAAATATATAATCAAAGTGATAATAAGCTCAGTCAAAGTTTGTGTT
CCAAAAGTTGATTGATGCAAGCACCTAATTTACAGTTTTGTTGGTAAAAA
CGGAGCTCACAGTTCTAGTTCAAGACGGGGTGcttattaaaaacaaaact
ttcttcTCGCCTACAGGTCAGACAGCTTACGGTGCTTTAACAGACTGGTA
TCTTACAGATGGTGCTGAAGGGTCGTACATTGACGACATAATCGAGTCGC
CTACATGTAACCCTAGTTGTTGCACACAACATTGTCACAAATGTAAAAGT
TTGAATGATATTTTACACGGCACTGAAAATGGACACACGAACTTAGTATA
CCGACATCGAAAACGTAAGAAAGAGACAAATACCAAGAATGAAGTCGAAC
AAAACCATGATAATCAAAATAATTAtcaaagatttgtttattaTTCTAAA
AGTTATACTTTGAATCCACATCCATTGGTGATGTATGCCTTGATGTCGAT
GGTAGGTCAGATATGGCTGCAACTAAGGGTATAGCATGTTAAGAGTTAAC
AATGGCAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044658XLOC_044658Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071922-exon-scaffold_65-1491911889:101276..101284TCONS_00071922-exon-scaffold_65-1491911889:101276..101284Clytia hemisphaericaexon
TCONS_00071922-exon-scaffold_65-1510915933:101276..101284TCONS_00071922-exon-scaffold_65-1510915933:101276..101284Clytia hemisphaericaexon
TCONS_00071922-exon-scaffold_65-1575043694:101276..101284TCONS_00071922-exon-scaffold_65-1575043694:101276..101284Clytia hemisphaericaexon
TCONS_00071922-exon-scaffold_65-1491911889:110570..110871TCONS_00071922-exon-scaffold_65-1491911889:110570..110871Clytia hemisphaericaexon
TCONS_00071922-exon-scaffold_65-1510915933:110570..110871TCONS_00071922-exon-scaffold_65-1510915933:110570..110871Clytia hemisphaericaexon
TCONS_00071922-exon-scaffold_65-1575043694:110570..110871TCONS_00071922-exon-scaffold_65-1575043694:110570..110871Clytia hemisphaericaexon
TCONS_00071922-exon-scaffold_65-1491911889:112007..112244TCONS_00071922-exon-scaffold_65-1491911889:112007..112244Clytia hemisphaericaexon
TCONS_00071922-exon-scaffold_65-1510915933:112007..112244TCONS_00071922-exon-scaffold_65-1510915933:112007..112244Clytia hemisphaericaexon
TCONS_00071922-exon-scaffold_65-1575043694:112007..112244TCONS_00071922-exon-scaffold_65-1575043694:112007..112244Clytia hemisphaericaexon
TCONS_00071922-exon-scaffold_65-1491911889:112492..112624TCONS_00071922-exon-scaffold_65-1491911889:112492..112624Clytia hemisphaericaexon
TCONS_00071922-exon-scaffold_65-1510915933:112492..112624TCONS_00071922-exon-scaffold_65-1510915933:112492..112624Clytia hemisphaericaexon
TCONS_00071922-exon-scaffold_65-1575043694:112492..112624TCONS_00071922-exon-scaffold_65-1575043694:112492..112624Clytia hemisphaericaexon
TCONS_00071922-exon-scaffold_65-1491911889:112947..113030TCONS_00071922-exon-scaffold_65-1491911889:112947..113030Clytia hemisphaericaexon
TCONS_00071922-exon-scaffold_65-1510915933:112947..113030TCONS_00071922-exon-scaffold_65-1510915933:112947..113030Clytia hemisphaericaexon
TCONS_00071922-exon-scaffold_65-1575043694:112947..113030TCONS_00071922-exon-scaffold_65-1575043694:112947..113030Clytia hemisphaericaexon
TCONS_00071922-exon-scaffold_65-1491911889:113231..113329TCONS_00071922-exon-scaffold_65-1491911889:113231..113329Clytia hemisphaericaexon
TCONS_00071922-exon-scaffold_65-1510915933:113231..113329TCONS_00071922-exon-scaffold_65-1510915933:113231..113329Clytia hemisphaericaexon
TCONS_00071922-exon-scaffold_65-1575043694:113231..113329TCONS_00071922-exon-scaffold_65-1575043694:113231..113329Clytia hemisphaericaexon
TCONS_00071922-exon-scaffold_65-1491911889:113620..113707TCONS_00071922-exon-scaffold_65-1491911889:113620..113707Clytia hemisphaericaexon
TCONS_00071922-exon-scaffold_65-1510915933:113620..113707TCONS_00071922-exon-scaffold_65-1510915933:113620..113707Clytia hemisphaericaexon
TCONS_00071922-exon-scaffold_65-1575043694:113620..113707TCONS_00071922-exon-scaffold_65-1575043694:113620..113707Clytia hemisphaericaexon
TCONS_00071922-exon-scaffold_65-1491911889:114156..114328TCONS_00071922-exon-scaffold_65-1491911889:114156..114328Clytia hemisphaericaexon
TCONS_00071922-exon-scaffold_65-1510915933:114156..114328TCONS_00071922-exon-scaffold_65-1510915933:114156..114328Clytia hemisphaericaexon
TCONS_00071922-exon-scaffold_65-1575043694:114156..114328TCONS_00071922-exon-scaffold_65-1575043694:114156..114328Clytia hemisphaericaexon
TCONS_00071922-exon-scaffold_65-1491911889:114606..114726TCONS_00071922-exon-scaffold_65-1491911889:114606..114726Clytia hemisphaericaexon
TCONS_00071922-exon-scaffold_65-1510915933:114606..114726TCONS_00071922-exon-scaffold_65-1510915933:114606..114726Clytia hemisphaericaexon
TCONS_00071922-exon-scaffold_65-1575043694:114606..114726TCONS_00071922-exon-scaffold_65-1575043694:114606..114726Clytia hemisphaericaexon
TCONS_00071922-exon-scaffold_65-1491911889:115192..115584TCONS_00071922-exon-scaffold_65-1491911889:115192..115584Clytia hemisphaericaexon
TCONS_00071922-exon-scaffold_65-1510915933:115192..115584TCONS_00071922-exon-scaffold_65-1510915933:115192..115584Clytia hemisphaericaexon
TCONS_00071922-exon-scaffold_65-1575043694:115192..115584TCONS_00071922-exon-scaffold_65-1575043694:115192..115584Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_65supercontigscaffold_65:101276..115584 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.887363	1.42453	0.0186191	0.302091	0	0	1.0255e-07	0	1.55908	4.56976	0	2.79999	3.37317	0.00148771	0.803457	0.763801	34.9807	27.2878	3.64281	4.72047	5.27173	6.37697	4.07784	3.29941	0	0	14.4958	7.88467	0.687933	0.267928
Blast
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BLAST of TCONS_00071922 vs. Swiss-Prot (Human)
Match: NOTUM (Palmitoleoyl-protein carboxylesterase NOTUM OS=Homo sapiens GN=NOTUM PE=1 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.020e-26
Identity = 102/342 (29.82%), Postives = 148/342 (43.27%), Query Frame = 2 
Query:  182 NADSFAHAQEMFEQRLRMHSRHHWNNLSLKRIHKARRRNATCMDGSDARYYLSRQWESNNWVIHLQGGGSCITFDECRSRSEG--PLGSSLPLDAHITGEWTLSNDPKINPTFHKWNKVLIPYCSGDVFVGRMLKKNHPYRLPMLGHYIFTAVIEDLVRLYKINKKKTKILFGGTSAGGVGVLANAD----YLQEMTTPA-KVRAYNDGGWFTLFRSFGEKHNTNLPQFFHTLATLFE-KHWDGFADKTCQKHMPKSAA--CLYGELAIQYVKTPMFVMTSMWDLYQLNQMVPRSSPVIHLPPKLNQETKYLESFANNSYRSITGLLKKPKNGVFSPACYSH 1177
            N DSF    +   Q L   S    N     R+H     + TC DGS A YYL     S  W++ L+GG  C   + C SR +    L SS       TG   LS+ P+ NP +   N V IPYCS DV+ G    K+       +G  I   V+ +L  L +       +L  G+SAGG GVL N D     L+++  PA +VR   D GWF   + +      +      T A     ++W+G   + C++   +     C +G      ++ P+FV+  ++D  QL      +   +HL  +  QE   L  +  N  R +   LK      F+PAC SH
Sbjct:   62 NMDSFMAQVKSLAQSLYPCSAQQLNED--LRLHLLLNTSVTCNDGSPAGYYLKESRGSRRWLLFLEGGWYCFNRENCDSRYDTMRRLMSSRDWPRTRTGTGILSSQPEENPYWWNANMVFIPYCSSDVWSGAS-SKSEKNEYAFMGALIIQEVVREL--LGRGLSGAKVLLLAGSSAGGTGVLLNVDRVAEQLEKLGYPAIQVRGLADSGWFLDNKQYRHTDCVDTITCAPTEAIRRGIRYWNGVVPERCRRQFQEGEEWNCFFGYKVYPTLRCPVFVVQWLFDEAQL------TVDNVHLTGQPVQEG--LRLYIQNLGRELRHTLKDVP-ASFAPACLSH 389
The following BLAST results are available for this feature:
BLAST of TCONS_00071922 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NOTUM1.020e-2629.82Palmitoleoyl-protein carboxylesterase NOTUM OS=Hom... [more]
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