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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071914 ID=TCONS_00071914|Name=TCONS_00071914|organism=Clytia hemisphaerica|type=transcript|length=586bp
GTGTATTTGACATGGAACAGTATCGATAATCCTGTGTTCCGGATGAAGTA
CATTTTATATGGCGTTCGAATAATCCATTGTTTATCACTTTTGATTACGT
CATTTCAAATACTCACTAAAATAGACGACATGGTgagtaagaaaaagaag
aaataagaCCTAATTTATGATtggattttaatgaaaaaagtcTTTGTATT
AAATCTTTTAGGGTAAGAAATTATTTCATCAATTCATTATATACAATtat
ttacataaattttacGAAAATATTTCTACATTGTCAAATAATCATATata
caaaatcataaagaaaGTTCTGGAATAACAGACGAGATGGAACCATGTGT
CAATTTCCTCCATTTTATTCTACGGTTCTGAAACCAAACTTTGACTTGAA
TTTCATTCAAACCAAGTTGTCTTGCAAGAAAACGTCTCTCTTGACCAACG
ATATATTGTTGCTGTTGGAATTCAAACTCTAACCGTTCAAGTTGACTTGA
CGTGAAAATGGTCCGTCGACGTTTGCTGTATCGATTGCTCGTATCGTCAA
TGTCGTTGAAATATTTGGAATACTTCAAATTGAGGT Run BLAST on NCBI transcript from alignment at scaffold_65:23724..24500+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071914 ID=TCONS_00071914|Name=TCONS_00071914|organism=Clytia hemisphaerica|type=transcript|length=777bp|location=Sequence derived from alignment at scaffold_65:23724..24500+ (Clytia hemisphaerica)
GTGTATTTGACATGGAACAGTATCGATAATCCTGGTAAGCTTTTTCCTTT
AGAATATTTAAATATCAACCTGTGATGACAGATCGGAATTCTACATCTCA
GAATTCTGATAATCATTTCTGAATCTAAATGTACGAAGGACAACAAGAGA
AATTAAGAAACAAGAATTGCATTCAGATGGCCGAAAATCCTTTGAAAact
tcttcaaacttttctctAATTTCAGTGTTCCGGATGAAGTACATTTTATA
TGGCGTTCGAATAATCCATTGTTTATCACTTTTGATTACGTCATTTCAAA
TACTCACTAAAATAGACGACATGGTgagtaagaaaaagaagaaataagaC
CTAATTTATGATtggattttaatgaaaaaagtcTTTGTATTAAATCTTTT
AGGGTAAGAAATTATTTCATCAATTCATTATATACAATtatttacataaa
ttttacGAAAATATTTCTACATTGTCAAATAATCATATatacaaaatcat
aaagaaaGTTCTGGAATAACAGACGAGATGGAACCATGTGTCAATTTCCT
CCATTTTATTCTACGGTTCTGAAACCAAACTTTGACTTGAATTTCATTCA
AACCAAGTTGTCTTGCAAGAAAACGTCTCTCTTGACCAACGATATATTGT
TGCTGTTGGAATTCAAACTCTAACCGTTCAAGTTGACTTGACGTGAAAAT
GGTCCGTCGACGTTTGCTGTATCGATTGCTCGTATCGTCAATGTCGTTGA
AATATTTGGAATACTTCAAATTGAGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00071914-exon-scaffold_65-1491911889:23724..23757 | TCONS_00071914-exon-scaffold_65-1491911889:23724..23757 | Clytia hemisphaerica | exon |
| TCONS_00071914-exon-scaffold_65-1510915933:23724..23757 | TCONS_00071914-exon-scaffold_65-1510915933:23724..23757 | Clytia hemisphaerica | exon |
| TCONS_00071914-exon-scaffold_65-1575043694:23724..23757 | TCONS_00071914-exon-scaffold_65-1575043694:23724..23757 | Clytia hemisphaerica | exon |
| TCONS_00071914-exon-scaffold_65-1491911889:23949..24500 | TCONS_00071914-exon-scaffold_65-1491911889:23949..24500 | Clytia hemisphaerica | exon |
| TCONS_00071914-exon-scaffold_65-1510915933:23949..24500 | TCONS_00071914-exon-scaffold_65-1510915933:23949..24500 | Clytia hemisphaerica | exon |
| TCONS_00071914-exon-scaffold_65-1575043694:23949..24500 | TCONS_00071914-exon-scaffold_65-1575043694:23949..24500 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_65 | supercontig | scaffold_65:23724..24500 + |
Blast
The following BLAST results are available for this feature:
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