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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071896 ID=TCONS_00071896|Name=TCONS_00071896|organism=Clytia hemisphaerica|type=transcript|length=1026bp
CAACATGACATACTAACTAGCAAAATaaatagtcaggtagaattgcatAA
CTACCCGAAAAAATGGTGTAAAGATTTTGGCAAAGAGATTCAGGAACATG
TtaggaatcaccaaaaaaaatcaCCACATCCAGGATAATGGGAAAATCCT
GAAATCCATAATGACAgacatggtactttttctacTACTTTTAATGCTAG
AGTATTTaacatagtttgcagaggggtatgaacccccaaggtttatttca
tcccccttCTGTAATGAAAACTTACCtccttttttatagaaaatctGTTT
TGCAAGGAAACTCACTACAAGGGGATGAAATGTATATAGTGATCGTGAGC
caacaatttcaaaatataactaGCGTATGTGTATGATTAATTTGAGCAAA
GTTTCTTTCTATTGTCCTaagcaaaacctcaaaatatttttaccataaat
attttccaaagtcgagatgtataaattacaattttttgacttttagcaaG
AAAACAATTAGAGTTTCAACGTAAGAACTGCGTGAGGTTTTACTCCAGAC
TATATAAGCTTTCTGcaggccaaatatctcaaaccatctgattatccctt
ttagCAACCCTTTTGAAGACTCGATAAAACCGTTTGaatactttgattgt
tattgattactttctaTAACTTCAATAAAACCAATTGATTACTAAAAGAA
TGACTTTCAGTAATTACCCTGCCATTTTGTGTGCGTTTGCCCTGGGTTTT
CTCAAGTAACTCctatctgattggttgaaaaaacaaATGTGGTTTTTACA
TGTGAACTGCGCATTTTTATTGGGCAGCTCAAGTTATAATCCGTTACCTC
CTGTGGACAACATGGATTTTCCGtgacaatttacttttgaaaaacttcag
gattTCTGTAACATACATATATTCCCATACTTGGCTAGAAAATAGAGCCA
ATTTTATGGGTTTTCCAATACTTAGaagaaaatagagcaaattttatCGA
TTTTCCAATACATGTGACTAAATAAT Run BLAST on NCBI transcript from alignment at scaffold_64:126288..127313 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071896 ID=TCONS_00071896|Name=TCONS_00071896|organism=Clytia hemisphaerica|type=transcript|length=1026bp|location=Sequence derived from alignment at scaffold_64:126288..127313 (Clytia hemisphaerica)
ATTATTTAGTCACATGTATTGGAAAATCGataaaatttgctctattttct
tCTAAGTATTGGAAAACCCATAAAATTGGCTCTATTTTCTAGCCAAGTAT
GGGAATATATGTATGTTACAGAaatcctgaagtttttcaaaagtaaattg
tcaCGGAAAATCCATGTTGTCCACAGGAGGTAACGGATTATAACTTGAGC
TGCCCAATAAAAATGCGCAGTTCACATGTAAAAACCACATttgttttttc
aaccaatcagatagGAGTTACTTGAGAAAACCCAGGGCAAACGCACACAA
AATGGCAGGGTAATTACTGAAAGTCATTCTTTTAGTAATCAATTGGTTTT
ATTGAAGTTAtagaaagtaatcaataacaatcaaagtattCAAACGGTTT
TATCGAGTCTTCAAAAGGGTTGctaaaagggataatcagatggtttgaga
tatttggcctgCAGAAAGCTTATATAGTCTGGAGTAAAACCTCACGCAGT
TCTTACGTTGAAACTCTAATTGTTTTCttgctaaaagtcaaaaaattgta
atttatacatctcgactttggaaaatatttatggtaaaaatattttgagg
ttttgcttAGGACAATAGAAAGAAACTTTGCTCAAATTAATCATACACAT
ACGCtagttatattttgaaattgttgGCTCACGATCACTATATACATTTC
ATCCCCTTGTAGTGAGTTTCCTTGCAAAACagattttctataaaaaagga
GGTAAGTTTTCATTACAGaagggggatgaaataaaccttgggggttcata
cccctctgcaaactatgttAAATACTCTAGCATTAAAAGTAgtagaaaaa
gtaccatgtcTGTCATTATGGATTTCAGGATTTTCCCATTATCCTGGATG
TGGtgattttttttggtgattcctaACATGTTCCTGAATCTCTTTGCCAA
AATCTTTACACCATTTTTTCGGGTAGTTatgcaattctacctgactattt
ATTTTGCTAGTTAGTATGTCATGTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00071896-exon-scaffold_64-1491911889:126288..127313 | TCONS_00071896-exon-scaffold_64-1491911889:126288..127313 | Clytia hemisphaerica | exon |
| TCONS_00071896-exon-scaffold_64-1510915933:126288..127313 | TCONS_00071896-exon-scaffold_64-1510915933:126288..127313 | Clytia hemisphaerica | exon |
| TCONS_00071896-exon-scaffold_64-1575043694:126288..127313 | TCONS_00071896-exon-scaffold_64-1575043694:126288..127313 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_64 | supercontig | scaffold_64:126288..127313 . |
Blast
The following BLAST results are available for this feature:
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