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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071882 ID=TCONS_00071882|Name=TCONS_00071882|organism=Clytia hemisphaerica|type=transcript|length=794bp
TGAAGCATCAGAAGGAACTGAGCAACCAGAAGAAACCGAAGGACCCGGAG
GAACACAAGAACAGGAAACACCACAAGGCCCATTTGTAACAGAGGGACCC
GAAAAAACAGAGGAACCAGAAGAGACAGAAAAACCACAAGCAACAAAAAG
ACCATTTAAAACAGAGGCATCAGAAGGAACAGAGACCCCAGAGGGAACTG
AGGGACCCGTAGGAACCGAGGGACCAGAGGGAACTGGGGGACCCGTAGGA
ACCGAGGAACCAGAGGGAACTGAGGGACCTGTAGAAACCGACAGACCAGA
TGGAACAGAAGAACCAATTGAAACAGAAAGACCTCAGATAACCaaagctG
GCAAAATGGGTCAAGTTCGTATTTGCGAAGATGACAGCAGGATCATTTCT
TGTAAGAATGAAGGAAAACTTCAAATCCTCGAAGGTTCTTACTATGGTCG
CAAGATAAGCAAAGGTTGCAAAAAATGGTATCATTACCATTGGAACACAT
CTTGCGGAGAAGCATCAAGTAAAAGAATCATGTCCTTGAAATGTGATGGC
AGAAAATCATGTGAAATCTCTTGCGACAATGAGTCATTTGAGGATCCTTG
TTGGGGAACCAAAAAATACTGCTTAGTCAAATACAAATGTGCTTAAACGA
ATCGACATAAATTTGACATGCACCCATTTATCCTATGATGACAAATATAA
TATTCAGATataattttttgctttattAATTAATTCTTAAAggtgtattt
tttatttgacgaaGGGAAGGGAAAAATAAGAAGGTAAATCTGGC Run BLAST on NCBI transcript from alignment at scaffold_64:212134..213156- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071882 ID=TCONS_00071882|Name=TCONS_00071882|organism=Clytia hemisphaerica|type=transcript|length=1023bp|location=Sequence derived from alignment at scaffold_64:212134..213156- (Clytia hemisphaerica)
TGAAGCATCAGAAGGAACTGAGCAACCAGAAGAAACCGAAGGACCCGGAG
GAACACAAGAACAGGAAACACCACAAGGCCCATTTGTAACAGAGGGACCC
GAAAAAACAGAGGAACCAGAAGAGACAGAAAAACCACAAGCAACAAAAAG
ACCATTTAAAACAGAGGCATCAGAAGGAACAGAGACCCCAGAGGGAACTG
AGGGACCCGTAGGAACCGAGGCACCAGAGGGAACTGAGGCACCAGAAGGA
ACAGAGACCCCAGATGAAACTGAGGGACCAGAGGGAACTGGGGGACCCGT
AGGAACCGAGGAACCAGAGGGAACTGAGGGACCTGTAGAAACCGACAGAC
CAGATGGAACAGAAGAACCAATTGAAACAGAAAGACCTCAGATAACCAAA
GGTTTGATTTTTTTTAACGTTTTTCGGACTTCGAACAGGGTAATATGAAA
GAGACATTATGGATAGGAGGAAAGGTTTGTAGGTTTCCACAAAGATCAGT
CTGTAGTGATACTATCAAATACTATGGAAGGATGACTCAGTTATTCATTG
TTTTATTTTCTTCTTTTTTTTCATAGCTGGCAAAATGGGTCAAGTTCGTA
TTTGCGAAGATGACAGCAGGATCATTTCTTGTAAGAATGAAGGAAAACTT
CAAATCCTCGAAGGTTCTTACTATGGTCGCAAGATAAGCAAAGGTTGCAA
AAAATGGTATCATTACCATTGGAACACATCTTGCGGAGAAGCATCAAGTA
AAAGAATCATGTCCTTGAAATGTGATGGCAGAAAATCATGTGAAATCTCT
TGCGACAATGAGTCATTTGAGGATCCTTGTTGGGGAACCAAAAAATACTG
CTTAGTCAAATACAAATGTGCTTAAACGAATCGACATAAATTTGACATGC
ACCCATTTATCCTATGATGACAAATATAATATTCAGATATAATTTTTTGC
TTTATTAATTAATTCTTAAAGGTGTATTTTTTATTTGACGAAGGGAAGGG
AAAAATAAGAAGGTAAATCTGGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00071882-exon-scaffold_64-1575043694:212937..213156 | TCONS_00071882-exon-scaffold_64-1575043694:212937..213156 | Clytia hemisphaerica | exon |
| TCONS_00071882-exon-scaffold_64-1575043694:212756..212882 | TCONS_00071882-exon-scaffold_64-1575043694:212756..212882 | Clytia hemisphaerica | exon |
| TCONS_00071882-exon-scaffold_64-1575043694:212134..212580 | TCONS_00071882-exon-scaffold_64-1575043694:212134..212580 | Clytia hemisphaerica | exon |
| TCONS_00071882-exon-scaffold_64-1510915933:212937..213156 | TCONS_00071882-exon-scaffold_64-1510915933:212937..213156 | Clytia hemisphaerica | exon |
| TCONS_00071882-exon-scaffold_64-1510915933:212756..212882 | TCONS_00071882-exon-scaffold_64-1510915933:212756..212882 | Clytia hemisphaerica | exon |
| TCONS_00071882-exon-scaffold_64-1510915933:212134..212580 | TCONS_00071882-exon-scaffold_64-1510915933:212134..212580 | Clytia hemisphaerica | exon |
| TCONS_00071882-exon-scaffold_64-1491911889:212937..213156 | TCONS_00071882-exon-scaffold_64-1491911889:212937..213156 | Clytia hemisphaerica | exon |
| TCONS_00071882-exon-scaffold_64-1491911889:212756..212882 | TCONS_00071882-exon-scaffold_64-1491911889:212756..212882 | Clytia hemisphaerica | exon |
| TCONS_00071882-exon-scaffold_64-1491911889:212134..212580 | TCONS_00071882-exon-scaffold_64-1491911889:212134..212580 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_64 | supercontig | scaffold_64:212134..213156 - |
Blast
The following BLAST results are available for this feature:
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