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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071867 ID=TCONS_00071867|Name=TCONS_00071867|organism=Clytia hemisphaerica|type=transcript|length=5001bp
GGAAAAGGAAGAAGCAAAGCCGGTCAAAAGGTTTTTGTTTCTAAAAGATT
TTTCGTTAGTCTCGTTGTTGGAGGTTATCCgtttttggaaatcaaattCG
CTCAGTCCCATAAAAACATCTAAGGGAGGCTATAGAGTTCAGATCACAAT
CACAATCGATAGGGcagatatattttttattttgaagaaaatggcGTAAA
AATGATAACACTGTTAACCATTATTTCAGCTGTCTTAACAGttgcCAGCG
GACGAGAAATCTATTTCTCCAAATCGAAGCAAAGTCGAGATGTGCTCGAT
TGCGGTAACATTAAAACACCATGCCGAACGTTGGCGCATGCTCTAAGAAT
CGCCAAGAATAAAGACACCATCACATTCCTTTGCAACCAGGAAAAGAATG
CCTGCAAATTTCGATTAAGAAGGAGAATCGATATCTTCAATAAGGATTTG
ATCATCAAAAGCTCTGGTGATAATCCACAAACACCGATATTCTACTTCGA
GACTGGTGAAGTGTTCCAATTGAGAGGTGGACGTGTCAAACTGACATTCT
CGAATATTACAATCCATCTCCGGAGATCTGTCGGCAACATCCTGAACGGT
GAATCTAGAGTTGTCTTCAAACAATGCTCAATCTTGGTAAAGAAACGACG
TTACTCTTTGGGAATTCCAAGCAGTTTGAAATTTATCCGTGTCAATGGGA
ACGCCGTTTTGAAACTATACCTCATAGACAGTACTGTGGTTCATTTGAAA
TTTGACAGGCTTCGGATCCTAAACCTAATGCTAGCAGACGACTTGGGACG
ATCGGTGGATGTTTACATCTTCAACAGCAACATCAATGGTAATATCGTGG
CAACTTTTAAAACAAGTGGTACTGGGCGTATTCATGTCTCGGGAACCAAA
TTTAACTACACCACACTGTCAATCGAGGGTACAGACCAAGCAACCAAAAC
CTGGTCAAGCATTAAGATAATAGATTCGGAAATCAACAATGGTCTTTTGA
ACCAACAACTCTTATTAAAGAATCTCAAAGACGTTCGCATGCAAAACGTT
ACTCTCAAAGGTAGTGAGAATGTTAACTCGCTAAGAGCACAATCAACCTC
AAGTCTTATCATCAGTGGTTTCAAAGTGCTCACACGAATGGCTCACATCT
CAAACATAGACCACCTGGTCATTCAAAAAGCATCCTTCACCAGATCTAAT
CTCATTATCCAGGAATGCAAGACAGTCATGCTGGCAACATCGGACCTGAA
AGACACCGACGTGTTGATACAAAAAATCCAGTTCTTACAATCTAACGACG
ATACGTACGAAAACAGCGAGTTGAAGGTTTTGCATTCCAGAATGGTAATC
ATTAACTCTGGTAAGTATACCACGTCTTATGATCAACTTATATCGTTCAC
TCGCTCCACTGGTGTTATACGAAATGCAATCATCTCCCATCGTCCATTGC
GTGTTCTTAACAGCAAATTAACCATCATGAGTTCGAGATTTTCAAATAAT
ACAGCAATCGAAGGCAAAGGAGGTGGAGCGATATTGAGCCAGAACTCAAC
CCTGGTTATAAATGACACAGTCTTCCATAACTGTTCAGCAAAATATTTCG
GTGGATGTTACTACAGCACGGATAAAGGAAGCACTTTACAAATAAATAGA
GTCAAATTCGAATCTTACATAAATGAGATTGCAAACCCTTCATTATTCGG
AAGCTCCATATACTCGACAACAACAGTGGACTTGAATGACGTGGATTTTC
TCCTTCACAATATAACCAGAAGTCCTATCGTTTTCATCAAGGAGCACCAA
GAAACATTAGCTTGTGACCAGAAAATCAGCTCCCTTGGTGATTTCAAACT
ACAATGTCCATCAGACCAAACAGTTCACCAAGAGATACACTTTAACGAGC
GAAACGATTTATGCGATACCAACAATTTCGATTTCTTAACCATCTCATGT
GTACCGTGTAACCCAGGCTTTATCAACCCGTTAAAAGCGACTTCCACGAA
TAGAAAAAAGGACGTTACATTTATAAACAATAAATGCACGAGCTGCGCTA
ATGAAACTTACGTCGAGACGTATCGCAACCAAACCGGATATGAAGTAAAC
TGCCCACTTGTGGTCAATATCGTTCCCGCCGCAGCCACGCCATCGCACAA
GTGCGCCAACAACCACACCATGATTTACGATCCACAATGTCCGTACGGTT
TCCATTTTAGTATTTTCTCAAACGAATGTCTTCACCACCGACTTTTTAAT
ACGTACCACGCATTCATCTTCTGGTGTTGTCTAATGGTCATCGGATCTTT
ATACGCCGTCATTCTAATGTACATCAAAGAAATTGTTGTTATGTTAAGAA
TCAAACACGTGTTTCTACAACTGAAAATTGTGTTCGAATATTGTTGCTGC
TGTTGCGGATGTAGTGATGAAGATGATGGTTTCCGTCTTCAAGAAAGCCC
TGATATTATCGATGATGAATTTGATTTAGTGATCCTCAAACCTGACCAAG
TCCAAATCATGCCTTTGAGATTCACCATGGGGACTACACTGGGGATTATC
AAGATCCTGTTCTTCTTTTATCAAGTGGAATCGCTCATCCGAGTACCCTG
CCCTTTTAAAGAAGACGTTGAAATAACAGTATTGTCTATTATTAGAGACA
GCATATCAACAATAATGTCATTGCGATTGCAGTATTTTGTGAAAGGACTG
CATTTGATACCCGAGAAAAATTTCACTGAGAATGGGAAAGAAATTATCAA
AGCCACATTCGGGTTATGGCTTTTGATTCCAGTTTTATTGATCCTGATTG
GTGCTTTAATGGGATATATCAATAAGAAGTGTCAACCAAGAGATAGATAT
CAAATCTCCGAAGGCTCAATGTCAAGAGAAGATAGCGTGGTATCTGATGA
TGAGGAGACTGTGGAAGATAACAATAATAAATTGCCTCAGAACGAGATTT
CAAAGGATATTCCACAGACCATACGTGAAGGTGAGATACTAGAGATCCCA
ATACCAAAATTGAAGGTTCAACCAATGAAGAGACGTTTCGACCGTATCGA
TGGTAAAGTTCCAATCTACGTCGAAAAACCGTTGGCATTCCGCGTGAAAT
GTTTCTTGCTTTTACTATTGACTCTTGTTTACTTACCTATCGCTACCTTG
ATTCTAAAGAGTATTGACTGTACTGAAAACACCAAAGGTCTAAATGTTTT
AACCACACAACAAGACATTCAATGTTACCAGGGCGTCCAAATATTTGCCA
TGATCCTCATTGCATTGTGGGTCATCCCATTCCCCTTAGCAGTCTACTTT
GCGTCTATTATGCAATACACGTGTAAGATAAACCCACGTGAACTTTTCAT
CTCACTACTATgtccaccatctttgattttcttctATGCACGTGGGAAAC
TATCAAAATACCGGCGCACGATCAATAAAGAGGACGCAATGATGGCGAAA
CATTTGTTGATGACGCTTTACGAATCGTTCAGACTTCAAAAAAGAGACCG
CCGTTTTGACGTCATGTGGGATGTCTCCTATCTAGCCCGGAAACTTGTTT
TAATGGTTCTCATCGTTTTCTCACCGAACAGAATCAGATTGTATTTGGTG
GCTGCTTTTCTAGTCTTTTGTATCCTGCTCCAAATCAAGATTAAACCTTT
CAGCCGTGATCTAACGAACCGTCTTGAATTTTTATCACTGGTCACACTCT
GCTTCTTAACAGTTGCTAACATCTTTTGGGAAAAACAGAACACTTGTGTT
GATCAGACGATGTTGAGCATATTCCAAGTTTTCTTCGTGTACGCCGAATA
CTCGATCATATGTGCGCCCTTCTTGATTGCTATCTTTTCAGTACCGTTAG
CTTATTTACTTGCCTTCATTTGTATGTTCAGAGACCGCCACAGTGAGGAG
GGCGGTGAGGAACGCCAGAGTTTAAGATCTGCGCCCTCTGATGAAAAAGA
TTGGCAATACCCAAACGAGGAAGAGAAAGCTGACGGAAATGGGGCGGTCG
AGAAAAGCCGGAAAACGAGTACTGTGAGTGCTACTGGGTTGGTTTTCAAT
GAAGATGGACATTGGGTTGGTACGCAGGAGACTGGGCTCGAAAGAAGCGG
GGAAAACTTGATTATTAGCCCTAGAAGAGAAGCGAGGCTTAGTGATGATG
AAGCGTTGCTTGGAAACGAAGGTAACGGGAGTGGATTAGATGACGAGAAA
GACACATTGATTTTCAATGATATTGGACATTCAACTGTTTGAAGTTTGCT
TTTATCCGGTGGCTGGCTAATGGATAGTATTGTTGCAGTGAGATATAGAG
GAACAATAACACTCTTTAAAAACGatctcaaaatttaagattGGCTGTAT
TGAGTGATTATGAAACATGTTCGGTTAGGATAGCTATTTATAAATAAGCA
TAACCTTCTCAGGGGGGTCGAATTGATAGACTTTGTTCATGGCTGAAAGA
CTGATTGGTTGGTATCAGCCCGCTCAGCCGAATAACCCGCCGATTGgtat
aaaaatatgttttgcaGTAATAATTTGTTTAGGTTTGGCAATAGACTGAT
CCGGCAAAATACAGTTAGAGACTTCAAGCAAACCTCAAGCAAGCtgcctg
ttcctaactgacataaATATCACCCATGGAACAAAAAACTATGTGAAGGT
CtaaacgggaaatatttgaaGACTTTGAGTTAACAAGTCGTTACTAAACC
ATTAGTACATATTCTTTCTAccatttctaataaaaaatggctgatcgtgg
gtgaaaatgacgtcacacggaATCGGTCTATACACCATATAATCGTCTAG
TGTCtaagtaattttttttgtggACAATAGTCTATAAGATTCATATTAGG
ATCGATTGTATTTTTGAtgtaaataagattttcatGTAACTTCCATGTAT
GTTGTATTTGTGTTTTCAGAATTTGCGTACAAACAATGAAATTGTAAATA
GCGATTTAAGAGCTGATCAGCTGCCATATAAAGTTACAAACATGATTTTC
A Run BLAST on NCBI protein sequence of TCONS_00071867-protein >TCONS_00071867-protein ID=TCONS_00071867-protein|Name=TCONS_00071867-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1346bp
MITLLTIISAVLTVASGREIYFSKSKQSRDVLDCGNIKTPCRTLAHALRI
AKNKDTITFLCNQEKNACKFRLRRRIDIFNKDLIIKSSGDNPQTPIFYFE
TGEVFQLRGGRVKLTFSNITIHLRRSVGNILNGESRVVFKQCSILVKKRR
YSLGIPSSLKFIRVNGNAVLKLYLIDSTVVHLKFDRLRILNLMLADDLGR
SVDVYIFNSNINGNIVATFKTSGTGRIHVSGTKFNYTTLSIEGTDQATKT
WSSIKIIDSEINNGLLNQQLLLKNLKDVRMQNVTLKGSENVNSLRAQSTS
SLIISGFKVLTRMAHISNIDHLVIQKASFTRSNLIIQECKTVMLATSDLK
DTDVLIQKIQFLQSNDDTYENSELKVLHSRMVIINSGKYTTSYDQLISFT
RSTGVIRNAIISHRPLRVLNSKLTIMSSRFSNNTAIEGKGGGAILSQNST
LVINDTVFHNCSAKYFGGCYYSTDKGSTLQINRVKFESYINEIANPSLFG
SSIYSTTTVDLNDVDFLLHNITRSPIVFIKEHQETLACDQKISSLGDFKL
QCPSDQTVHQEIHFNERNDLCDTNNFDFLTISCVPCNPGFINPLKATSTN
RKKDVTFINNKCTSCANETYVETYRNQTGYEVNCPLVVNIVPAAATPSHK
CANNHTMIYDPQCPYGFHFSIFSNECLHHRLFNTYHAFIFWCCLMVIGSL
YAVILMYIKEIVVMLRIKHVFLQLKIVFEYCCCCCGCSDEDDGFRLQESP
DIIDDEFDLVILKPDQVQIMPLRFTMGTTLGIIKILFFFYQVESLIRVPC
PFKEDVEITVLSIIRDSISTIMSLRLQYFVKGLHLIPEKNFTENGKEIIK
ATFGLWLLIPVLLILIGALMGYINKKCQPRDRYQISEGSMSREDSVVSDD
EETVEDNNNKLPQNEISKDIPQTIREGEILEIPIPKLKVQPMKRRFDRID
GKVPIYVEKPLAFRVKCFLLLLLTLVYLPIATLILKSIDCTENTKGLNVL
TTQQDIQCYQGVQIFAMILIALWVIPFPLAVYFASIMQYTCKINPRELFI
SLLCPPSLIFFYARGKLSKYRRTINKEDAMMAKHLLMTLYESFRLQKRDR
RFDVMWDVSYLARKLVLMVLIVFSPNRIRLYLVAAFLVFCILLQIKIKPF
SRDLTNRLEFLSLVTLCFLTVANIFWEKQNTCVDQTMLSIFQVFFVYAEY
SIICAPFLIAIFSVPLAYLLAFICMFRDRHSEEGGEERQSLRSAPSDEKD
WQYPNEEEKADGNGAVEKSRKTSTVSATGLVFNEDGHWVGTQETGLERSG
ENLIISPRREARLSDDEALLGNEGNGSGLDDEKDTLIFNDIGHSTV Run BLAST on NCBI transcript from alignment at scaffold_64:27037..32299- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071867 ID=TCONS_00071867|Name=TCONS_00071867|organism=Clytia hemisphaerica|type=transcript|length=5263bp|location=Sequence derived from alignment at scaffold_64:27037..32299- (Clytia hemisphaerica)
GGAAAAGGAAGAAGCAAAGCCGGTCAAAAGGTTTTTGTTTCTAAAAGATT
TTTCGTTAGTCTCGTTGTTGGAGGTTATCCGTTTTTGGAAATCAAATTCG
CTCAGTCCCATAAAAACATCTAAGGGAGGCTATAGAGTTCAGATCACAAT
CACAATCGATAGGGCAGATATATTTTTTATTTTGAAGAAAATGGCGTAAA
AATGATAACACTGTTAACCATTATTTCAGCTGTCTTAACAGGTAAGAAAA
GCCATTGAAATAATCAAATAAAATAATGCTGATAAACTTTGCACGGCTCA
TGTAATGACCAGGCACAAAGGTGTCAACTCTAAAACTGGTTGAAAGTAAA
TTTACAAAATAAGGAATACTCTAAAAAGCGGGCATTAATTTTCGCCCTGG
TGATAGCACTATTTTTTGGCTTTCGTATCTAATGTAGACCGATGATGTCG
GATCCGTTGTAAATTTTATTCAATTTCATTTCTTCATGTTTTTTTCTTTT
TAGTTGCCAGCGGACGAGAAATCTATTTCTCCAAATCGAAGCAAAGTCGA
GATGTGCTCGATTGCGGTAACATTAAAACACCATGCCGAACGTTGGCGCA
TGCTCTAAGAATCGCCAAGAATAAAGACACCATCACATTCCTTTGCAACC
AGGAAAAGAATGCCTGCAAATTTCGATTAAGAAGGAGAATCGATATCTTC
AATAAGGATTTGATCATCAAAAGCTCTGGTGATAATCCACAAACACCGAT
ATTCTACTTCGAGACTGGTGAAGTGTTCCAATTGAGAGGTGGACGTGTCA
AACTGACATTCTCGAATATTACAATCCATCTCCGGAGATCTGTCGGCAAC
ATCCTGAACGGTGAATCTAGAGTTGTCTTCAAACAATGCTCAATCTTGGT
AAAGAAACGACGTTACTCTTTGGGAATTCCAAGCAGTTTGAAATTTATCC
GTGTCAATGGGAACGCCGTTTTGAAACTATACCTCATAGACAGTACTGTG
GTTCATTTGAAATTTGACAGGCTTCGGATCCTAAACCTAATGCTAGCAGA
CGACTTGGGACGATCGGTGGATGTTTACATCTTCAACAGCAACATCAATG
GTAATATCGTGGCAACTTTTAAAACAAGTGGTACTGGGCGTATTCATGTC
TCGGGAACCAAATTTAACTACACCACACTGTCAATCGAGGGTACAGACCA
AGCAACCAAAACCTGGTCAAGCATTAAGATAATAGATTCGGAAATCAACA
ATGGTCTTTTGAACCAACAACTCTTATTAAAGAATCTCAAAGACGTTCGC
ATGCAAAACGTTACTCTCAAAGGTAGTGAGAATGTTAACTCGCTAAGAGC
ACAATCAACCTCAAGTCTTATCATCAGTGGTTTCAAAGTGCTCACACGAA
TGGCTCACATCTCAAACATAGACCACCTGGTCATTCAAAAAGCATCCTTC
ACCAGATCTAATCTCATTATCCAGGAATGCAAGACAGTCATGCTGGCAAC
ATCGGACCTGAAAGACACCGACGTGTTGATACAAAAAATCCAGTTCTTAC
AATCTAACGACGATACGTACGAAAACAGCGAGTTGAAGGTTTTGCATTCC
AGAATGGTAATCATTAACTCTGGTAAGTATACCACGTCTTATGATCAACT
TATATCGTTCACTCGCTCCACTGGTGTTATACGAAATGCAATCATCTCCC
ATCGTCCATTGCGTGTTCTTAACAGCAAATTAACCATCATGAGTTCGAGA
TTTTCAAATAATACAGCAATCGAAGGCAAAGGAGGTGGAGCGATATTGAG
CCAGAACTCAACCCTGGTTATAAATGACACAGTCTTCCATAACTGTTCAG
CAAAATATTTCGGTGGATGTTACTACAGCACGGATAAAGGAAGCACTTTA
CAAATAAATAGAGTCAAATTCGAATCTTACATAAATGAGATTGCAAACCC
TTCATTATTCGGAAGCTCCATATACTCGACAACAACAGTGGACTTGAATG
ACGTGGATTTTCTCCTTCACAATATAACCAGAAGTCCTATCGTTTTCATC
AAGGAGCACCAAGAAACATTAGCTTGTGACCAGAAAATCAGCTCCCTTGG
TGATTTCAAACTACAATGTCCATCAGACCAAACAGTTCACCAAGAGATAC
ACTTTAACGAGCGAAACGATTTATGCGATACCAACAATTTCGATTTCTTA
ACCATCTCATGTGTACCGTGTAACCCAGGCTTTATCAACCCGTTAAAAGC
GACTTCCACGAATAGAAAAAAGGACGTTACATTTATAAACAATAAATGCA
CGAGCTGCGCTAATGAAACTTACGTCGAGACGTATCGCAACCAAACCGGA
TATGAAGTAAACTGCCCACTTGTGGTCAATATCGTTCCCGCCGCAGCCAC
GCCATCGCACAAGTGCGCCAACAACCACACCATGATTTACGATCCACAAT
GTCCGTACGGTTTCCATTTTAGTATTTTCTCAAACGAATGTCTTCACCAC
CGACTTTTTAATACGTACCACGCATTCATCTTCTGGTGTTGTCTAATGGT
CATCGGATCTTTATACGCCGTCATTCTAATGTACATCAAAGAAATTGTTG
TTATGTTAAGAATCAAACACGTGTTTCTACAACTGAAAATTGTGTTCGAA
TATTGTTGCTGCTGTTGCGGATGTAGTGATGAAGATGATGGTTTCCGTCT
TCAAGAAAGCCCTGATATTATCGATGATGAATTTGATTTAGTGATCCTCA
AACCTGACCAAGTCCAAATCATGCCTTTGAGATTCACCATGGGGACTACA
CTGGGGATTATCAAGATCCTGTTCTTCTTTTATCAAGTGGAATCGCTCAT
CCGAGTACCCTGCCCTTTTAAAGAAGACGTTGAAATAACAGTATTGTCTA
TTATTAGAGACAGCATATCAACAATAATGTCATTGCGATTGCAGTATTTT
GTGAAAGGACTGCATTTGATACCCGAGAAAAATTTCACTGAGAATGGGAA
AGAAATTATCAAAGCCACATTCGGGTTATGGCTTTTGATTCCAGTTTTAT
TGATCCTGATTGGTGCTTTAATGGGATATATCAATAAGAAGTGTCAACCA
AGAGATAGATATCAAATCTCCGAAGGCTCAATGTCAAGAGAAGATAGCGT
GGTATCTGATGATGAGGAGACTGTGGAAGATAACAATAATAAATTGCCTC
AGAACGAGATTTCAAAGGATATTCCACAGACCATACGTGAAGGTGAGATA
CTAGAGATCCCAATACCAAAATTGAAGGTTCAACCAATGAAGAGACGTTT
CGACCGTATCGATGGTAAAGTTCCAATCTACGTCGAAAAACCGTTGGCAT
TCCGCGTGAAATGTTTCTTGCTTTTACTATTGACTCTTGTTTACTTACCT
ATCGCTACCTTGATTCTAAAGAGTATTGACTGTACTGAAAACACCAAAGG
TCTAAATGTTTTAACCACACAACAAGACATTCAATGTTACCAGGGCGTCC
AAATATTTGCCATGATCCTCATTGCATTGTGGGTCATCCCATTCCCCTTA
GCAGTCTACTTTGCGTCTATTATGCAATACACGTGTAAGATAAACCCACG
TGAACTTTTCATCTCACTACTATGTCCACCATCTTTGATTTTCTTCTATG
CACGTGGGAAACTATCAAAATACCGGCGCACGATCAATAAAGAGGACGCA
ATGATGGCGAAACATTTGTTGATGACGCTTTACGAATCGTTCAGACTTCA
AAAAAGAGACCGCCGTTTTGACGTCATGTGGGATGTCTCCTATCTAGCCC
GGAAACTTGTTTTAATGGTTCTCATCGTTTTCTCACCGAACAGAATCAGA
TTGTATTTGGTGGCTGCTTTTCTAGTCTTTTGTATCCTGCTCCAAATCAA
GATTAAACCTTTCAGCCGTGATCTAACGAACCGTCTTGAATTTTTATCAC
TGGTCACACTCTGCTTCTTAACAGTTGCTAACATCTTTTGGGAAAAACAG
AACACTTGTGTTGATCAGACGATGTTGAGCATATTCCAAGTTTTCTTCGT
GTACGCCGAATACTCGATCATATGTGCGCCCTTCTTGATTGCTATCTTTT
CAGTACCGTTAGCTTATTTACTTGCCTTCATTTGTATGTTCAGAGACCGC
CACAGTGAGGAGGGCGGTGAGGAACGCCAGAGTTTAAGATCTGCGCCCTC
TGATGAAAAAGATTGGCAATACCCAAACGAGGAAGAGAAAGCTGACGGAA
ATGGGGCGGTCGAGAAAAGCCGGAAAACGAGTACTGTGAGTGCTACTGGG
TTGGTTTTCAATGAAGATGGACATTGGGTTGGTACGCAGGAGACTGGGCT
CGAAAGAAGCGGGGAAAACTTGATTATTAGCCCTAGAAGAGAAGCGAGGC
TTAGTGATGATGAAGCGTTGCTTGGAAACGAAGGTAACGGGAGTGGATTA
GATGACGAGAAAGACACATTGATTTTCAATGATATTGGACATTCAACTGT
TTGAAGTTTGCTTTTATCCGGTGGCTGGCTAATGGATAGTATTGTTGCAG
TGAGATATAGAGGAACAATAACACTCTTTAAAAACGATCTCAAAATTTAA
GATTGGCTGTATTGAGTGATTATGAAACATGTTCGGTTAGGATAGCTATT
TATAAATAAGCATAACCTTCTCAGGGGGGTCGAATTGATAGACTTTGTTC
ATGGCTGAAAGACTGATTGGTTGGTATCAGCCCGCTCAGCCGAATAACCC
GCCGATTGGTATAAAAATATGTTTTGCAGTAATAATTTGTTTAGGTTTGG
CAATAGACTGATCCGGCAAAATACAGTTAGAGACTTCAAGCAAACCTCAA
GCAAGCTGCCTGTTCCTAACTGACATAAATATCACCCATGGAACAAAAAA
CTATGTGAAGGTCTAAACGGGAAATATTTGAAGACTTTGAGTTAACAAGT
CGTTACTAAACCATTAGTACATATTCTTTCTACCATTTCTAATAAAAAAT
GGCTGATCGTGGGTGAAAATGACGTCACACGGAATCGGTCTATACACCAT
ATAATCGTCTAGTGTCTAAGTAATTTTTTTTGTGGACAATAGTCTATAAG
ATTCATATTAGGATCGATTGTATTTTTGATGTAAATAAGATTTTCATGTA
ACTTCCATGTATGTTGTATTTGTGTTTTCAGAATTTGCGTACAAACAATG
AAATTGTAAATAGCGATTTAAGAGCTGATCAGCTGCCATATAAAGTTACA
AACATGATTTTCA Coding sequence (CDS) from alignment at scaffold_64:27037..32299- >TCONS_00071867 ID=TCONS_00071867|Name=TCONS_00071867|organism=Clytia hemisphaerica|type=CDS|length=8082bp|location=Sequence derived from alignment at scaffold_64:27037..32299- (Clytia hemisphaerica)
TTGCCAGCGGACGAGAAATCTATTTCTCCAAATCGAAGCAAAGTCGAGAT
GTGCTCGATTGCGGTAACATTAAAACACCATGCCGAACGTTGGCGCATGC
TCTAAGAATCGCCAAGAATAAAGACACCATCACATTCCTTTGCAACCAGG
AAAAGAATGCCTGCAAATTTCGATTAAGAAGGAGAATCGATATCTTCAAT
AAGGATTTGATCATCAAAAGCTCTGGTGATAATCCACAAACACCGATATT
CTACTTCGAGACTGGTGAAGTGTTCCAATTGAGAGGTGGACGTGTCAAAC
TGACATTCTCGAATATTACAATCCATCTCCGGAGATCTGTCGGCAACATC
CTGAACGGTGAATCTAGAGTTGTCTTCAAACAATGCTCAATCTTGGTAAA
GAAACGACGTTACTCTTTGGGAATTCCAAGCAGTTTGAAATTTATCCGTG
TCAATGGGAACGCCGTTTTGAAACTATACCTCATAGACAGTACTGTGGTT
CATTTGAAATTTGACAGGCTTCGGATCCTAAACCTAATGCTAGCAGACGA
CTTGGGACGATCGGTGGATGTTTACATCTTCAACAGCAACATCAATGGTA
ATATCGTGGCAACTTTTAAAACAAGTGGTACTGGGCGTATTCATGTCTCG
GGAACCAAATTTAACTACACCACACTGTCAATCGAGGGTACAGACCAAGC
AACCAAAACCTGGTCAAGCATTAAGATAATAGATTCGGAAATCAACAATG
GTCTTTTGAACCAACAACTCTTATTAAAGAATCTCAAAGACGTTCGCATG
CAAAACGTTACTCTCAAAGGTAGTGAGAATGTTAACTCGCTAAGAGCACA
ATCAACCTCAAGTCTTATCATCAGTGGTTTCAAAGTGCTCACACGAATGG
CTCACATCTCAAACATAGACCACCTGGTCATTCAAAAAGCATCCTTCACC
AGATCTAATCTCATTATCCAGGAATGCAAGACAGTCATGCTGGCAACATC
GGACCTGAAAGACACCGACGTGTTGATACAAAAAATCCAGTTCTTACAAT
CTAACGACGATACGTACGAAAACAGCGAGTTGAAGGTTTTGCATTCCAGA
ATGGTAATCATTAACTCTGGTAAGTATACCACGTCTTATGATCAACTTAT
ATCGTTCACTCGCTCCACTGGTGTTATACGAAATGCAATCATCTCCCATC
GTCCATTGCGTGTTCTTAACAGCAAATTAACCATCATGAGTTCGAGATTT
TCAAATAATACAGCAATCGAAGGCAAAGGAGGTGGAGCGATATTGAGCCA
GAACTCAACCCTGGTTATAAATGACACAGTCTTCCATAACTGTTCAGCAA
AATATTTCGGTGGATGTTACTACAGCACGGATAAAGGAAGCACTTTACAA
ATAAATAGAGTCAAATTCGAATCTTACATAAATGAGATTGCAAACCCTTC
ATTATTCGGAAGCTCCATATACTCGACAACAACAGTGGACTTGAATGACG
TGGATTTTCTCCTTCACAATATAACCAGAAGTCCTATCGTTTTCATCAAG
GAGCACCAAGAAACATTAGCTTGTGACCAGAAAATCAGCTCCCTTGGTGA
TTTCAAACTACAATGTCCATCAGACCAAACAGTTCACCAAGAGATACACT
TTAACGAGCGAAACGATTTATGCGATACCAACAATTTCGATTTCTTAACC
ATCTCATGTGTACCGTGTAACCCAGGCTTTATCAACCCGTTAAAAGCGAC
TTCCACGAATAGAAAAAAGGACGTTACATTTATAAACAATAAATGCACGA
GCTGCGCTAATGAAACTTACGTCGAGACGTATCGCAACCAAACCGGATAT
GAAGTAAACTGCCCACTTGTGGTCAATATCGTTCCCGCCGCAGCCACGCC
ATCGCACAAGTGCGCCAACAACCACACCATGATTTACGATCCACAATGTC
CGTACGGTTTCCATTTTAGTATTTTCTCAAACGAATGTCTTCACCACCGA
CTTTTTAATACGTACCACGCATTCATCTTCTGGTGTTGTCTAATGGTCAT
CGGATCTTTATACGCCGTCATTCTAATGTACATCAAAGAAATTGTTGTTA
TGTTAAGAATCAAACACGTGTTTCTACAACTGAAAATTGTGTTCGAATAT
TGTTGCTGCTGTTGCGGATGTAGTGATGAAGATGATGGTTTCCGTCTTCA
AGAAAGCCCTGATATTATCGATGATGAATTTGATTTAGTGATCCTCAAAC
CTGACCAAGTCCAAATCATGCCTTTGAGATTCACCATGGGGACTACACTG
GGGATTATCAAGATCCTGTTCTTCTTTTATCAAGTGGAATCGCTCATCCG
AGTACCCTGCCCTTTTAAAGAAGACGTTGAAATAACAGTATTGTCTATTA
TTAGAGACAGCATATCAACAATAATGTCATTGCGATTGCAGTATTTTGTG
AAAGGACTGCATTTGATACCCGAGAAAAATTTCACTGAGAATGGGAAAGA
AATTATCAAAGCCACATTCGGGTTATGGCTTTTGATTCCAGTTTTATTGA
TCCTGATTGGTGCTTTAATGGGATATATCAATAAGAAGTGTCAACCAAGA
GATAGATATCAAATCTCCGAAGGCTCAATGTCAAGAGAAGATAGCGTGGT
ATCTGATGATGAGGAGACTGTGGAAGATAACAATAATAAATTGCCTCAGA
ACGAGATTTCAAAGGATATTCCACAGACCATACGTGAAGGTGAGATACTA
GAGATCCCAATACCAAAATTGAAGGTTCAACCAATGAAGAGACGTTTCGA
CCGTATCGATGGTAAAGTTCCAATCTACGTCGAAAAACCGTTGGCATTCC
GCGTGAAATGTTTCTTGCTTTTACTATTGACTCTTGTTTACTTACCTATC
GCTACCTTGATTCTAAAGAGTATTGACTGTACTGAAAACACCAAAGGTCT
AAATGTTTTAACCACACAACAAGACATTCAATGTTACCAGGGCGTCCAAA
TATTTGCCATGATCCTCATTGCATTGTGGGTCATCCCATTCCCCTTAGCA
GTCTACTTTGCGTCTATTATGCAATACACGTGTAAGATAAACCCACGTGA
ACTTTTCATCTCACTACTATGTCCACCATCTTTGATTTTCTTCTATGCAC
GTGGGAAACTATCAAAATACCGGCGCACGATCAATAAAGAGGACGCAATG
ATGGCGAAACATTTGTTGATGACGCTTTACGAATCGTTCAGACTTCAAAA
AAGAGACCGCCGTTTTGACGTCATGTGGGATGTCTCCTATCTAGCCCGGA
AACTTGTTTTAATGGTTCTCATCGTTTTCTCACCGAACAGAATCAGATTG
TATTTGGTGGCTGCTTTTCTAGTCTTTTGTATCCTGCTCCAAATCAAGAT
TAAACCTTTCAGCCGTGATCTAACGAACCGTCTTGAATTTTTATCACTGG
TCACACTCTGCTTCTTAACAGTTGCTAACATCTTTTGGGAAAAACAGAAC
ACTTGTGTTGATCAGACGATGTTGAGCATATTCCAAGTTTTCTTCGTGTA
CGCCGAATACTCGATCATATGTGCGCCCTTCTTGATTGCTATCTTTTCAG
TACCGTTAGCTTATTTACTTGCCTTCATTTGTATGTTCAGAGACCGCCAC
AGTGAGGAGGGCGGTGAGGAACGCCAGAGTTTAAGATCTGCGCCCTCTGA
TGAAAAAGATTGGCAATACCCAAACGAGGAAGAGAAAGCTGACGGAAATG
GGGCGGTCGAGAAAAGCCGGAAAACGAGTACTGTGAGTGCTACTGGGTTG
GTTTTCAATGAAGATGGACATTGGGTTGGTACGCAGGAGACTGGGCTCGA
AAGAAGCGGGGAAAACTTGATTATTAGCCCTAGAAGAGAAGCGAGGCTTA
GTGATGATGAAGCGTTGCTTGGAAACGAAGGTAACGGGAGTGGATTAGAT
GACGAGAAAGACACATTGATTTTCAATGATATTGGACATTCAACTGTTTG
AATGATAACACTGTTAACCATTATTTCAGCTGTCTTAACAGTTGCCAGCG
GACGAGAAATCTATTTCTCCAAATCGAAGCAAAGTCGAGATGTGCTCGAT
TGCGGTAACATTAAAACACCATGCCGAACGTTGGCGCATGCTCTAAGAAT
CGCCAAGAATAAAGACACCATCACATTCCTTTGCAACCAGGAAAAGAATG
CCTGCAAATTTCGATTAAGAAGGAGAATCGATATCTTCAATAAGGATTTG
ATCATCAAAAGCTCTGGTGATAATCCACAAACACCGATATTCTACTTCGA
GACTGGTGAAGTGTTCCAATTGAGAGGTGGACGTGTCAAACTGACATTCT
CGAATATTACAATCCATCTCCGGAGATCTGTCGGCAACATCCTGAACGGT
GAATCTAGAGTTGTCTTCAAACAATGCTCAATCTTGGTAAAGAAACGACG
TTACTCTTTGGGAATTCCAAGCAGTTTGAAATTTATCCGTGTCAATGGGA
ACGCCGTTTTGAAACTATACCTCATAGACAGTACTGTGGTTCATTTGAAA
TTTGACAGGCTTCGGATCCTAAACCTAATGCTAGCAGACGACTTGGGACG
ATCGGTGGATGTTTACATCTTCAACAGCAACATCAATGGTAATATCGTGG
CAACTTTTAAAACAAGTGGTACTGGGCGTATTCATGTCTCGGGAACCAAA
TTTAACTACACCACACTGTCAATCGAGGGTACAGACCAAGCAACCAAAAC
CTGGTCAAGCATTAAGATAATAGATTCGGAAATCAACAATGGTCTTTTGA
ACCAACAACTCTTATTAAAGAATCTCAAAGACGTTCGCATGCAAAACGTT
ACTCTCAAAGGTAGTGAGAATGTTAACTCGCTAAGAGCACAATCAACCTC
AAGTCTTATCATCAGTGGTTTCAAAGTGCTCACACGAATGGCTCACATCT
CAAACATAGACCACCTGGTCATTCAAAAAGCATCCTTCACCAGATCTAAT
CTCATTATCCAGGAATGCAAGACAGTCATGCTGGCAACATCGGACCTGAA
AGACACCGACGTGTTGATACAAAAAATCCAGTTCTTACAATCTAACGACG
ATACGTACGAAAACAGCGAGTTGAAGGTTTTGCATTCCAGAATGGTAATC
ATTAACTCTGGTAAGTATACCACGTCTTATGATCAACTTATATCGTTCAC
TCGCTCCACTGGTGTTATACGAAATGCAATCATCTCCCATCGTCCATTGC
GTGTTCTTAACAGCAAATTAACCATCATGAGTTCGAGATTTTCAAATAAT
ACAGCAATCGAAGGCAAAGGAGGTGGAGCGATATTGAGCCAGAACTCAAC
CCTGGTTATAAATGACACAGTCTTCCATAACTGTTCAGCAAAATATTTCG
GTGGATGTTACTACAGCACGGATAAAGGAAGCACTTTACAAATAAATAGA
GTCAAATTCGAATCTTACATAAATGAGATTGCAAACCCTTCATTATTCGG
AAGCTCCATATACTCGACAACAACAGTGGACTTGAATGACGTGGATTTTC
TCCTTCACAATATAACCAGAAGTCCTATCGTTTTCATCAAGGAGCACCAA
GAAACATTAGCTTGTGACCAGAAAATCAGCTCCCTTGGTGATTTCAAACT
ACAATGTCCATCAGACCAAACAGTTCACCAAGAGATACACTTTAACGAGC
GAAACGATTTATGCGATACCAACAATTTCGATTTCTTAACCATCTCATGT
GTACCGTGTAACCCAGGCTTTATCAACCCGTTAAAAGCGACTTCCACGAA
TAGAAAAAAGGACGTTACATTTATAAACAATAAATGCACGAGCTGCGCTA
ATGAAACTTACGTCGAGACGTATCGCAACCAAACCGGATATGAAGTAAAC
TGCCCACTTGTGGTCAATATCGTTCCCGCCGCAGCCACGCCATCGCACAA
GTGCGCCAACAACCACACCATGATTTACGATCCACAATGTCCGTACGGTT
TCCATTTTAGTATTTTCTCAAACGAATGTCTTCACCACCGACTTTTTAAT
ACGTACCACGCATTCATCTTCTGGTGTTGTCTAATGGTCATCGGATCTTT
ATACGCCGTCATTCTAATGTACATCAAAGAAATTGTTGTTATGTTAAGAA
TCAAACACGTGTTTCTACAACTGAAAATTGTGTTCGAATATTGTTGCTGC
TGTTGCGGATGTAGTGATGAAGATGATGGTTTCCGTCTTCAAGAAAGCCC
TGATATTATCGATGATGAATTTGATTTAGTGATCCTCAAACCTGACCAAG
TCCAAATCATGCCTTTGAGATTCACCATGGGGACTACACTGGGGATTATC
AAGATCCTGTTCTTCTTTTATCAAGTGGAATCGCTCATCCGAGTACCCTG
CCCTTTTAAAGAAGACGTTGAAATAACAGTATTGTCTATTATTAGAGACA
GCATATCAACAATAATGTCATTGCGATTGCAGTATTTTGTGAAAGGACTG
CATTTGATACCCGAGAAAAATTTCACTGAGAATGGGAAAGAAATTATCAA
AGCCACATTCGGGTTATGGCTTTTGATTCCAGTTTTATTGATCCTGATTG
GTGCTTTAATGGGATATATCAATAAGAAGTGTCAACCAAGAGATAGATAT
CAAATCTCCGAAGGCTCAATGTCAAGAGAAGATAGCGTGGTATCTGATGA
TGAGGAGACTGTGGAAGATAACAATAATAAATTGCCTCAGAACGAGATTT
CAAAGGATATTCCACAGACCATACGTGAAGGTGAGATACTAGAGATCCCA
ATACCAAAATTGAAGGTTCAACCAATGAAGAGACGTTTCGACCGTATCGA
TGGTAAAGTTCCAATCTACGTCGAAAAACCGTTGGCATTCCGCGTGAAAT
GTTTCTTGCTTTTACTATTGACTCTTGTTTACTTACCTATCGCTACCTTG
ATTCTAAAGAGTATTGACTGTACTGAAAACACCAAAGGTCTAAATGTTTT
AACCACACAACAAGACATTCAATGTTACCAGGGCGTCCAAATATTTGCCA
TGATCCTCATTGCATTGTGGGTCATCCCATTCCCCTTAGCAGTCTACTTT
GCGTCTATTATGCAATACACGTGTAAGATAAACCCACGTGAACTTTTCAT
CTCACTACTATGTCCACCATCTTTGATTTTCTTCTATGCACGTGGGAAAC
TATCAAAATACCGGCGCACGATCAATAAAGAGGACGCAATGATGGCGAAA
CATTTGTTGATGACGCTTTACGAATCGTTCAGACTTCAAAAAAGAGACCG
CCGTTTTGACGTCATGTGGGATGTCTCCTATCTAGCCCGGAAACTTGTTT
TAATGGTTCTCATCGTTTTCTCACCGAACAGAATCAGATTGTATTTGGTG
GCTGCTTTTCTAGTCTTTTGTATCCTGCTCCAAATCAAGATTAAACCTTT
CAGCCGTGATCTAACGAACCGTCTTGAATTTTTATCACTGGTCACACTCT
GCTTCTTAACAGTTGCTAACATCTTTTGGGAAAAACAGAACACTTGTGTT
GATCAGACGATGTTGAGCATATTCCAAGTTTTCTTCGTGTACGCCGAATA
CTCGATCATATGTGCGCCCTTCTTGATTGCTATCTTTTCAGTACCGTTAG
CTTATTTACTTGCCTTCATTTGTATGTTCAGAGACCGCCACAGTGAGGAG
GGCGGTGAGGAACGCCAGAGTTTAAGATCTGCGCCCTCTGATGAAAAAGA
TTGGCAATACCCAAACGAGGAAGAGAAAGCTGACGGAAATGGGGCGGTCG
AGAAAAGCCGGAAAACGAGTACTGTGAGTGCTACTGGGTTGGTTTTCAAT
GAAGATGGACATTGGGTTGGTACGCAGGAGACTGGGCTCGAAAGAAGCGG
GGAAAACTTGATTATTAGCCCTAGAAGAGAAGCGAGGCTTAGTGATGATG
AAGCGTTGCTTGGAAACGAAGGTAACGGGAGTGGATTAGATGACGAGAAA
GACACATTGATTTTCAATGATATTGGACATTCAACTGTTTGAATGATAAC
ACTGTTAACCATTATTTCAGCTGTCTTAACAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00071867-exon-scaffold_64-1575043694:32059..32299 | TCONS_00071867-exon-scaffold_64-1575043694:32059..32299 | Clytia hemisphaerica | exon |
| TCONS_00071867-exon-scaffold_64-1575043694:27037..31796 | TCONS_00071867-exon-scaffold_64-1575043694:27037..31796 | Clytia hemisphaerica | exon |
| TCONS_00071867-exon-scaffold_64-1510915933:32059..32299 | TCONS_00071867-exon-scaffold_64-1510915933:32059..32299 | Clytia hemisphaerica | exon |
| TCONS_00071867-exon-scaffold_64-1510915933:27037..31796 | TCONS_00071867-exon-scaffold_64-1510915933:27037..31796 | Clytia hemisphaerica | exon |
| TCONS_00071867-exon-scaffold_64-1491911889:32059..32299 | TCONS_00071867-exon-scaffold_64-1491911889:32059..32299 | Clytia hemisphaerica | exon |
| TCONS_00071867-exon-scaffold_64-1491911889:27037..31796 | TCONS_00071867-exon-scaffold_64-1491911889:27037..31796 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_64 | supercontig | scaffold_64:27037..32299 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR012332 | P22_tailspike_C-like |
| IPR011050 | Pectin_lyase_fold/virulence |
Blast
The following BLAST results are available for this feature:
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