TCONS_00071840 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00071840
Unique Name	TCONS_00071840
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1990

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_64:128864..134717+
coding sequence from alignment at scaffold_64:128864..134717+

transcript sequence

>TCONS_00071840 ID=TCONS_00071840|Name=TCONS_00071840|organism=Clytia hemisphaerica|type=transcript|length=1990bp
attttcggccattcgccaaattaaattcccgccaaaatttcttactTTAA
TTTGTGGTATTCAACTTGACATcagggatcgaattagcgtatcgcatttc
gcaattctcgatgcgtttttggattacttacaagctaaaaattgaaaatt
gatccattttaggatgcaaaatcatgcttatcaaaaaattgagatgcact
ttctatcccttatttcgatgcctgGACATCctaactagcaaaaggtctat
tattttAACTGTGCATCAatttttcttatcattgtttttaattattcaac
atgaaatAAGGGTGATTTTAGAAATATATCCTTAAGCAAATTAAAACATT
CCAAATCTCCCTCAATTTTGTTTATACTGCTTACACCCACTAAAAAGAAT
ATCAATTTACATCAAAAGAAGGATTGGAATGTAGATTTTTGGAATGATGG
TGTTGTAAGAACTCTTACGTCagcaaatcttatttttgaatttaacTCAG
TTTAACTTTTCATATAAAAGTATTATGGTAATAATATGAAAATTGGTCCT
GATTGGTTCAAAGATGTTAATCCTCAAATCCTCCTGCACTACTACTGCAG
TTTCTTAAGCTAAACAAGATGAATTGAGTGGTACAGAACTAACTTCCATG
GACAAGCTCAACCATTCTCTTTTGTTTTAGTATTTCGGTATTAGTGTATT
CTAAAAAGATTAGTTATTTTAGACTAATAATCATCAAAAATGTCTGATGA
AGAAGTTCTTGATGGATTCTTTGCCAAAAAAGAcaaatccaaaaaaccaa
agaaaaagaagaagactaAAACAGAGACTGTAATCACTACTCAATCTGAA
TCACAGGCTGCTAAAGTTGATGAATGGAAAGATTTTGAggagaaaaagga
aaaggatttttcaaatttgaagatTGCTGATTTACAGGGCGGTGATGAAA
ATGATAAGGACGAACAAGAATATCAACAAAATGATGAAGATGACGTCGAC
GGCGAAGAAGGAGAACAAGGGAAATGGAAGCCTGCTCCAGCAAGCAATAA
TACAGCTAAAAACCCACCTCCTGCTCCTGTCAAACAAGAACCTGTCGGTA
CACACAACGTAGTGGGTGGTAAATACGTTCCGCCATCTATGAAAAGAGCC
ACCATGGCTTCTGCATCGCATCAAGCAGCACCTAGAAGAAGAGGCGCTCC
ACCAGATATTAAAAGTCAAGCTGCTTTCCCTACGCTTGCTGCTGCTAAAC
AAGACACTGAAGCAGTCCCGAGTGATTTTGAAGTCGTCAAACGTGGAACG
CGATCCAATGAGGCACGCAGGGATGACGGCGCTCCTCGACTGGAAACGGG
GAATCGATACGATGGGCTACGTAGTTAAAATTGACGCCAAAACaactcaa
aatgttaaaaatgcgTTCGAGCTCGTTGAATGAGTTTTTTGATCTACTTA
AGGCTACCAGGCCCACTTTTGGAGTGTTGTCCTAACTTTTGGAGGTGGtt
taaaaatagcaaaaatattgacactGATAAAGATGAACAATgtattttga
aattctgtatgAATGAACATGAAAGAAGGGAATTTTGCAGTTTCCAAGAA
CTTGAACTTAGTTTTCactctttttgaaatttaactattttttttgaaat
aatatttaaaaaaagaattgattttTATTTGTTCGGTAATAATttagttt
attaaaattttttccaatttctttttaatagaAACGAGTATCCATTCTAT
ACGCGGGAGTATTTTCAGGCATGATATGTTCAGTCCAGTCTTATCCAACA
GTTTAATATTATATATTACTTAAAATCATCTTAAATTAATTCCAATACGT
ACCTATGTTATTTACATGAACAATTTGTTTTACCCCTTACGCAGAATGGT
ATAGAAACGAATAACTTGAACTTCttaatttagatttttatatAGATTTG
tttcgaatttctttttcagaagaTAAGAAAATGCAATTCA

Run BLAST on NCBI

protein sequence of TCONS_00071840-protein

>TCONS_00071840-protein ID=TCONS_00071840-protein|Name=TCONS_00071840-protein|organism=Clytia hemisphaerica|type=polypeptide|length=212bp
MSDEEVLDGFFAKKDKSKKPKKKKKTKTETVITTQSESQAAKVDEWKDFE
EKKEKDFSNLKIADLQGGDENDKDEQEYQQNDEDDVDGEEGEQGKWKPAP
ASNNTAKNPPPAPVKQEPVGTHNVVGGKYVPPSMKRATMASASHQAAPRR
RGAPPDIKSQAAFPTLAAAKQDTEAVPSDFEVVKRGTRSNEARRDDGAPR
LETGNRYDGLRS

Run BLAST on NCBI

transcript from alignment at scaffold_64:128864..134717+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00071840 ID=TCONS_00071840|Name=TCONS_00071840|organism=Clytia hemisphaerica|type=transcript|length=5854bp|location=Sequence derived from alignment at scaffold_64:128864..134717+ (Clytia hemisphaerica)
attttcggccattcgccaaattaaattcccgccaaaatttcttactTTAA
TTTGTGGTATTCAACTTGACATcagggatcgaattagcgtatcgcatttc
gcaattctcgatgcgtttttggattacttacaagctaaaaattgaaaatt
gatccattttaggatgcaaaatcatgcttatcaaaaaattgagatgcact
ttctatcccttatttcgatgcctgGACATCctaactagcaaaaggtctat
tattttAACTGTGCATCAatttttcttatcattgtttttaattattcaac
atgaaatAAGGGTGATTTTAGAAATATATCCTTAAGCAAATTAAAACATT
CCAAATCTCCCTCAATTTTGTTTATACTGCTTACACCCACTAAAAAGAAT
ATCAATTTACATCAAAAGAAGGATTGGAATGTAGATTTTTGGAATGATGG
TGTTGTAAGAACTCTTACGTCagcaaatcttatttttgaatttaacTCAG
TTTAACTTTTCATATAAAAGTATTATGGTAATAATATGAAAATTGGTCCT
GATTGGTTCAAAGATGTTAATCCTCAAATCCTCCTGCACTACTACTGCAG
TTTCTTAAGCTAAACAAGATGAATTGAGTGGTACAGAACTAACTTCCATG
GACAAGCTCAACCATTCTCTTTTGTTTTAGTATTTCGGTATTAGTGTATT
CTAAAAAGATTAGTTATTTTAGACTAATAATCATCAAAAATGTCTGATGA
AGAAGTTCTTGATGGATTCTTTGCCAAAAAAGAcaaatccaaaaaaccaa
agaaaaagaagaagactaAAACAGAGACTGTAATCACTACTCAATCTGAA
TCACAGGCTGCTAAAGTAAGTTTcctattttttaaatgaagcaagtttaa
aatttaaaagtaatttatGCCTGTAATCTTAGCTGTATAATTGATGCTGC
TGCTATGTTATTGAAAATTTCCAGTTATTTTAGTACCCGAGAAAATTTGG
TTTGGAACTGTAGAATCTTTTggcttttaaaacaatttttaaaacgGTGT
AGATGAGAAGTTTGTTGTTAATTCTCTTAATTAAAATGATGGATGTTGGG
CTTAATAACTTTTTTCTTGGTAGGTTGATGAATGGAAAGATTTTGAggag
aaaaaggaaaaggatttttcaaatttgaagatTGCTGATTTACAGGGCGG
GTAAGTAAAGAATCTCAATACTTCAAAATCTAGTAGAGCAGAaaccgaaa
aattttttttttggctcTGGAATTGTCAAATGTaacattcatttttgttt
tctttgctcAGTGATGAAAATGATAAGGACGAACAAGAATATCAACAAAA
TGATGAAGATGACGTCGACGGtatttcttgttttcttgtattttagggat
aataattttttgaaaaccatccctgTAATCAATTTCCTTTGAGTATTAGG
CACACAAATTGTAGTTTCCACAAACCAAATCGTTAGTAAGatacaaaata
tcttttcagAATGTTAGCCAAGTTGTACTAATTggaatttaaaaacatta
ttctgatctttgcaaagaaaaaaactgtctgATTTGTACATGCTTGTACC
TCTGCTATATATTTTGACTGTTGTCGATGTTCAGGCGGTCAACAGTCATT
TAAAAAGACAGTAAGAGATATTACCAAATAAACGTTACCGAAAAAAGCAG
AGGAACATAtatgttaaagtttctttttggtCTTTGTGTTTGACTTTGAG
AAAGTCCAGTAAAGATTCAAACACCAAAACGAGCGGCCGTCTATATAGTA
CGTATGtactaaggggggggggctgggTGTAGGGCTGTCTTGTCAAAagc
atatgcttgcgtacaggggaggggagggggtcgaaacaaaaattttacca
tttttcgaaaagagGAACATACACGTTAAAGTTTCCTTTTGGTCTTTGTG
TTTGACTTTGAGAAAGTCCAGTAAAGATTCAAAcagcaaaacaaacaaaa
gcaATCAACATTCCAATGTGTAAAAACACTCAAGGTTGGTGTGTTTATAA
AAATTACATttaaatgctaaaaattaaTGTAAAAACTAATGTTTTCGTAC
TGAATTTTTTAATCAGTCTGGTCAAACAGAATCTTTTTACCAAGTGGAGA
CATGGTTATTCATTGAACCAGACTGTCGTCAGCACAACAAAGGCTGTCTT
CTTTAACTCTCCGActgctcctttagagctttagcgtgtccagccgccaa
tacgccaacggaatataaaatttctaaaatctaTTATatcatttaaatat
ttttctggtaagaaaaaccttgaaaatggtgaaaaattcatagcttctta
tttttttttgaaacaactTTAGGCGAAGAAGGAGAACAAGGGAAATGGAA
GCCTGCTCCAGCAAGCAATAATACAGCTAAAAACCCACCTCCTGCTCCTG
TCAAACAAGGTAAACTTATTCTTAATCCCATAAGGGAAGTGGAAAAAGAT
GAACTATTAAAAAACACCAATGTCTCCTCTGTTCGAATATATGGTAGGTG
TTTAAAgtcttgtaaatctcgaactttactcgcctATTTTTCGTGACTTT
GGTTTATCTTACCGTCTGCGGGATAACATCTCCGTAACCAATCGTCAGGT
AAGCTTGGAGCGACCACCACATACTCTCATGTATATTCTAAAACCCACTA
GAGTTTGAGTGGAAAAGGAGCTACTAAGCTCAGTCACTTTAAACATACAA
ATATCAAAGAGAAGTAAAAAGATTActtcttatttacaaaaattgaatgt
tttgaaccaaccctaaaaaagaaaatgaataaaacttCCCCATATGTATC
ATTTTTTGAGCCACAATTTCTCTAATTTCCTAAGAGTCTTATTAATTGCC
TCTGTCAGGGTCTCTATTGAATGGAAAATTAATCTTTATCGTTGTCATCT
TGttatgataaatttttcaataaattaaatttagtaaaGATTCTGAtcat
aatcgcacgatgggttattttttcttatttggcacgccctcaaagagagc
aattaatcgttaattgcatcctgtagagagcaattaatcgttaattgcat
cctgtagagagcaattaatcgttaatcacactctccaatgccgcgccaat
gtttacaaaattgatttgaatgatttttcttacattttttttgcatcgaa
cgttctaattgcattcgaaatttattttgtgagaaagaaaaacaataaac
agcaataaaagaaagacaaaaagagaagagaaaaatataaagattttaAG
TGTAATTTCTGtgatttactttcctaactgggaaaagtaGTGACAGCCAT
TGtacgattagctcgtaatcacataataacttgtacaattcgaaaattgc
actcgtgatttttttgtttcgaattttcctttcggactcggaaaattaat
aacaaaaaaatcacgagtgcaattatTCTctaattgcactcgttatcatg
tgattacatatacaaatGTTTTCCTGATTTTTATGGATTAAGCAATTACT
TATTTTCCAATAGAACCTGTCGGTACACACAACGTAGTGGGTGGTAAATA
CGTTCCGCCATCTATGAAAAGAGCCACCATGGCTTCTGCATCGCATCAAG
CAGCACCTAGAAGAAGAGGCGCTCCACCAGATATTAAAAGTCAAGCTGCT
TTCCCTACGCTTGCTGCTGCTAAACAAGACACGTAAGACATTTAAGATgc
caaaatgaaaaatgaaatcggGGCTCCGTTGGGCTAATGCCTCTCCCCAA
TGTACATAGCTTAACAGTTCTCTCAAAGTTAGCGGGTTGGTTGGAGATTG
GACACTAGCTGTGTCTCAGTTCGTGACAATTCCATTGATTCGTAGAATTC
AGGTACCGGATGGTGAACATTGAGCACGTCGCTCCCCTCGTCTACTACGA
ACTAGTGTAATAGCAACGAACCGATAGCGcagttgggagagcaatcgccc
ggcaagcgagaggtcgtgggttcaatccccactcgattcgttNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcaggatccg
ttgattcattacccataagtaatacgcacttgatttcacacagTGACTGT
TGATGGACTAGTTGTCCGAAATCGGGGCTCCGTTGGGCTAATGCCTCTCC
CCAATGTACATAGCTTAACAGCTCTCTCAAAGTTAGCGGGTTGGTTGAGA
TTGGACACTAGCTGTGTCTCAGTTCGTGGCAATTCCATTGATTCGTAGAA
TTCAGGTACCGGATGGTGAACATTGAGCACGTCGCTCCCCTCGTCAACTA
CGAACTAGTGTAATAGCAACGAACCGATAGCGcagttgggagagcaatcg
cccggcaagcgagaggtcgtgggttcaatccccactcgattcgttacctt
tgagaaaactgggaagtacattagtgcaggatccgttgattcattaccca
taagtaatacgcacttgatttcaTGCCAAAATGGTTTTTGAATTAgtaat
tttctaaaattatggtAAAACTAGATTACCTTAAAATAAGAACTAACTTT
GGCGAGAGgcaaaaatcgtaaagaaaattaaattaataACGAGTTGAAAA
ATACATATTTAATAACGAGTTGacataaatttttaattttattttacacG
CTAACATTAATAgacaaaatactaattttggtaaattagtgacaaaaaat
tagcgttttttgaGATACTTAAGGGTTCAtttcaaacatttgaaaaagtt
attttggcgagcaatcaattttgattttgtcGAGGCGGCAACTattttaa
ttttgtcaaaatacgccaaatttgccaaaagtagtattttgtttcaaact
aaAACAATTGTAAAACAagcttttttgaaatctagaactaatcttttttt
atcattgttcTTCTTTTGCAGTGAAGCAGTCCCGAGTGATTTTGAAGTCG
TCAAACGTGGAACGCGATCCAATGAGGCACGCAGGGATGACGGCGCTCCT
CGACTGGAAACGGGGAATCGATACGATGGGCTACGTAGTTAAAATTGACG
CCAAAACaactcaaaatgttaaaaatgcgTTCGAGCTCGTTGAATGAGTT
TTTTGATCTACTTAAGGCTACCAGGCCCACTTTTGGAGTGTTGTCCTAAC
TTTTGGAGGTGGtttaaaaatagcaaaaatattgacactGATAAAGATGA
ACAATgtattttgaaattctgtatgAATGAACATGAAAGAAGGGAATTTT
GCAGTTTCCAAGAACTTGAACTTAGTTTTCactctttttgaaatttaact
attttttttgaaataatatttaaaaaaagaattgattttTATTTGTTCGG
TAATAATttagtttattaaaattttttccaatttctttttaatagaAACG
AGTATCCATTCTATACGCGGGAGTATTTTCAGGCATGATATGTTCAGTCC
AGTCTTATCCAACAGTTTAATATTATATATTACTTAAAATCATCTTAAAT
TAATTCCAATACGTACCTATGTTATTTACATGAACAATTTGTTTTACCCC
TTACGCAGAATGGTATAGAAACGAATAACTTGAACTTCttaatttagatt
tttatatAGATTTGtttcgaatttctttttcagaagaTAAGAAAATGCAA
TTCA

Coding sequence (CDS) from alignment at scaffold_64:128864..134717+

>TCONS_00071840 ID=TCONS_00071840|Name=TCONS_00071840|organism=Clytia hemisphaerica|type=CDS|length=3834bp|location=Sequence derived from alignment at scaffold_64:128864..134717+ (Clytia hemisphaerica)
ATGTCTGATGAAGAAGTTCTTGATGGATTCTTTGCCAAAAAAGAcaaatc
caaaaaaccaaagaaaaagaagaagactaAAACAGAGACTGTAATCACTA
CTCAATCTGAATCACAGGCTGCTAAAGTTGATGAATGGAAAGATTTTGAg
gagaaaaaggaaaaggatttttcaaatttgaagatTGCTGATTTACAGGG
CGGTGATGAAAATGATAAGGACGAACAAGAATATCAACAAAATGATGAAG
ATGACGTCGACGGCGAAGAAGGAGAACAAGGGAAATGGAAGCCTGCTCCA
GCAAGCAATAATACAGCTAAAAACCCACCTCCTGCTCCTGTCAAACAAGA
ACCTGTCGGTACACACAACGTAGTGGGTGGTAAATACGTTCCGCCATCTA
TGAAAAGAGCCACCATGGCTTCTGCATCGCATCAAGCAGCACCTAGAAGA
AGAGGCGCTCCACCAGATATTAAAAGTCAAGCTGCTTTCCCTACGCTTGC
TGCTGCTAAACAAGACACTGAAGCAGTCCCGAGTGATTTTGAAGTCGTCA
AACGTGGAACGCGATCCAATGAGGCACGCAGGGATGACGGCGCTCCTCGA
CTGGAAACGGGGAATCGATACGATGGGCTACGTAGTTAAATGTCTGATGA
AGAAGTTCTTGATGGATTCTTTGCCAAAAAAGAcaaatccaaaaaaccaa
agaaaaagaagaagactaAAACAGAGACTGTAATCACTACTCAATCTGAA
TCACAGGCTGCTAAAGTTGATGAATGGAAAGATTTTGAggagaaaaagga
aaaggatttttcaaatttgaagatTGCTGATTTACAGGGCGGTGATGAAA
ATGATAAGGACGAACAAGAATATCAACAAAATGATGAAGATGACGTCGAC
GGCGAAGAAGGAGAACAAGGGAAATGGAAGCCTGCTCCAGCAAGCAATAA
TACAGCTAAAAACCCACCTCCTGCTCCTGTCAAACAAGAACCTGTCGGTA
CACACAACGTAGTGGGTGGTAAATACGTTCCGCCATCTATGAAAAGAGCC
ACCATGGCTTCTGCATCGCATCAAGCAGCACCTAGAAGAAGAGGCGCTCC
ACCAGATATTAAAAGTCAAGCTGCTTTCCCTACGCTTGCTGCTGCTAAAC
AAGACACTGAAGCAGTCCCGAGTGATTTTGAAGTCGTCAAACGTGGAACG
CGATCCAATGAGGCACGCAGGGATGACGGCGCTCCTCGACTGGAAACGGG
GAATCGATACGATGGGCTACGTAGTTAAATGTCTGATGAAGAAGTTCTTG
ATGGATTCTTTGCCAAAAAAGAcaaatccaaaaaaccaaagaaaaagaag
aagactaAAACAGAGACTGTAATCACTACTCAATCTGAATCACAGGCTGC
TAAAGTTGATGAATGGAAAGATTTTGAggagaaaaaggaaaaggattttt
caaatttgaagatTGCTGATTTACAGGGCGGTGATGAAAATGATAAGGAC
GAACAAGAATATCAACAAAATGATGAAGATGACGTCGACGGCGAAGAAGG
AGAACAAGGGAAATGGAAGCCTGCTCCAGCAAGCAATAATACAGCTAAAA
ACCCACCTCCTGCTCCTGTCAAACAAGAACCTGTCGGTACACACAACGTA
GTGGGTGGTAAATACGTTCCGCCATCTATGAAAAGAGCCACCATGGCTTC
TGCATCGCATCAAGCAGCACCTAGAAGAAGAGGCGCTCCACCAGATATTA
AAAGTCAAGCTGCTTTCCCTACGCTTGCTGCTGCTAAACAAGACACTGAA
GCAGTCCCGAGTGATTTTGAAGTCGTCAAACGTGGAACGCGATCCAATGA
GGCACGCAGGGATGACGGCGCTCCTCGACTGGAAACGGGGAATCGATACG
ATGGGCTACGTAGTTAAATGTCTGATGAAGAAGTTCTTGATGGATTCTTT
GCCAAAAAAGAcaaatccaaaaaaccaaagaaaaagaagaagactaAAAC
AGAGACTGTAATCACTACTCAATCTGAATCACAGGCTGCTAAAGTTGATG
AATGGAAAGATTTTGAggagaaaaaggaaaaggatttttcaaatttgaag
atTGCTGATTTACAGGGCGGTGATGAAAATGATAAGGACGAACAAGAATA
TCAACAAAATGATGAAGATGACGTCGACGGCGAAGAAGGAGAACAAGGGA
AATGGAAGCCTGCTCCAGCAAGCAATAATACAGCTAAAAACCCACCTCCT
GCTCCTGTCAAACAAGAACCTGTCGGTACACACAACGTAGTGGGTGGTAA
ATACGTTCCGCCATCTATGAAAAGAGCCACCATGGCTTCTGCATCGCATC
AAGCAGCACCTAGAAGAAGAGGCGCTCCACCAGATATTAAAAGTCAAGCT
GCTTTCCCTACGCTTGCTGCTGCTAAACAAGACACTGAAGCAGTCCCGAG
TGATTTTGAAGTCGTCAAACGTGGAACGCGATCCAATGAGGCACGCAGGG
ATGACGGCGCTCCTCGACTGGAAACGGGGAATCGATACGATGGGCTACGT
AGTTAAATGTCTGATGAAGAAGTTCTTGATGGATTCTTTGCCAAAAAAGA
caaatccaaaaaaccaaagaaaaagaagaagactaAAACAGAGACTGTAA
TCACTACTCAATCTGAATCACAGGCTGCTAAAGTTGATGAATGGAAAGAT
TTTGAggagaaaaaggaaaaggatttttcaaatttgaagatTGCTGATTT
ACAGGGCGGTGATGAAAATGATAAGGACGAACAAGAATATCAACAAAATG
ATGAAGATGACGTCGACGGCGAAGAAGGAGAACAAGGGAAATGGAAGCCT
GCTCCAGCAAGCAATAATACAGCTAAAAACCCACCTCCTGCTCCTGTCAA
ACAAGAACCTGTCGGTACACACAACGTAGTGGGTGGTAAATACGTTCCGC
CATCTATGAAAAGAGCCACCATGGCTTCTGCATCGCATCAAGCAGCACCT
AGAAGAAGAGGCGCTCCACCAGATATTAAAAGTCAAGCTGCTTTCCCTAC
GCTTGCTGCTGCTAAACAAGACACTGAAGCAGTCCCGAGTGATTTTGAAG
TCGTCAAACGTGGAACGCGATCCAATGAGGCACGCAGGGATGACGGCGCT
CCTCGACTGGAAACGGGGAATCGATACGATGGGCTACGTAGTTAAATGTC
TGATGAAGAAGTTCTTGATGGATTCTTTGCCAAAAAAGAcaaatccaaaa
aaccaaagaaaaagaagaagactaAAACAGAGACTGTAATCACTACTCAA
TCTGAATCACAGGCTGCTAAAGTTGATGAATGGAAAGATTTTGAggagaa
aaaggaaaaggatttttcaaatttgaagatTGCTGATTTACAGGGCGGTG
ATGAAAATGATAAGGACGAACAAGAATATCAACAAAATGATGAAGATGAC
GTCGACGGCGAAGAAGGAGAACAAGGGAAATGGAAGCCTGCTCCAGCAAG
CAATAATACAGCTAAAAACCCACCTCCTGCTCCTGTCAAACAAGAACCTG
TCGGTACACACAACGTAGTGGGTGGTAAATACGTTCCGCCATCTATGAAA
AGAGCCACCATGGCTTCTGCATCGCATCAAGCAGCACCTAGAAGAAGAGG
CGCTCCACCAGATATTAAAAGTCAAGCTGCTTTCCCTACGCTTGCTGCTG
CTAAACAAGACACTGAAGCAGTCCCGAGTGATTTTGAAGTCGTCAAACGT
GGAACGCGATCCAATGAGGCACGCAGGGATGACGGCGCTCCTCGACTGGA
AACGGGGAATCGATACGATGGGCTACGTAGTTAA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_044606	XLOC_044606	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00071840-protein	TCONS_00071840-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_64	supercontig	scaffold_64:128864..134717 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
82.7971	83.6165	98.4104	92.4239	63.47	49.245	60.218	63.1589	50.8908	56.4644	34.8001	31.3061	25.8185	27.792	38.9723	43.6105	60.1227	49.284	12.1625	16.4576	35.7627	34.8853	60.5672	53.9795	33.4659	38.1066	35.7888	24.0722	40.6233	37.7495

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR026806	CDV3

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00071840 vs. Swiss-Prot (Human)

BLAST of TCONS_00071840 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

You are here

TCONS_00071840 (transcript) - C. hemisphaerica