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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071834 ID=TCONS_00071834|Name=TCONS_00071834|organism=Clytia hemisphaerica|type=transcript|length=992bp
CAGGGAAGAGAGAAACATATGATTAAGGCACCCATGCCATTGATGTTAAG
CATCGTCTGGCCAGGATAATGCTTGATGATGAAAGCAAAAGACACATCTA
TATTTTTCGGATCTGACaatgtcaggacctgcaggcaacctagtagggtt
gggtatggttatgtatcagattggctaggaattgggttattttcagttag
ggttagggttagagctcgaaacaagcactcttttgcaATTTTCTCTTAAT
ATGGTAAATTCTGTAGTTTGTATGTACGTACAGTATAAATAGCCGTTAGA
AACGATCTTCTGCTGGTATGAATCCGTAGCGCAGTGGATAGGCAGGGCTc
ccaggccatattttagaaaggcaaggtagcgtccgttggtggccaaaaag
ggcactttttccagtgtttttccactaaaaaggctgtttttaccaatatt
ttagtaatttcaagaTAACCGGACgcttaaagggcatgaaaaatggcttg
GCTCTGGGTTTCTTATTATCggaactttacatttagtgggtTTGAATCCC
ATTGGTGTCGATCTTTCAGAAAATCATTCAAAcagttgaaaaacaaagaa
aataactCTCAAAGTCCCAGGAAGTCAGAATAACTACAAACTAACTAGGG
ACTGAAAAGTATGAAATAAGTCCAGATGTGTCTTTCACTTTTACGAAGGA
GCCATGGCCATAGGGGGACTGCCTGGGTACTTCCAGTTTCATGGAGCACA
GTGTAGTGAAAATTTAGTCAAGAACAACTGGAACCTCAGTTGGGGCAGAT
CCTTTACCAAGTCCCCAGAATATTGAAAAGGGGGTTCCCTTTTGAGCTCC
ATGGCAAGCCCATGGAGACCCCTGAAAAATTTTCCCAGCACTTCATTAGA
AGTCAGCCAGTTGCCTAGGGCTTCACGCACTATGAGGCCAAAAAGTGTGG
TCCAAAGGTCTAAGGTAGtctaaattgattttttggtgGGCC Run BLAST on NCBI transcript from alignment at scaffold_63:1239215..1240206 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071834 ID=TCONS_00071834|Name=TCONS_00071834|organism=Clytia hemisphaerica|type=transcript|length=992bp|location=Sequence derived from alignment at scaffold_63:1239215..1240206 (Clytia hemisphaerica)
GGCCcaccaaaaaatcaatttagaCTACCTTAGACCTTTGGACCACACTT
TTTGGCCTCATAGTGCGTGAAGCCCTAGGCAACTGGCTGACTTCTAATGA
AGTGCTGGGAAAATTTTTCAGGGGTCTCCATGGGCTTGCCATGGAGCTCA
AAAGGGAACCCCCTTTTCAATATTCTGGGGACTTGGTAAAGGATCTGCCC
CAACTGAGGTTCCAGTTGTTCTTGACTAAATTTTCACTACACTGTGCTCC
ATGAAACTGGAAGTACCCAGGCAGTCCCCCTATGGCCATGGCTCCTTCGT
AAAAGTGAAAGACACATCTGGACTTATTTCATACTTTTCAGTCCCTAGTT
AGTTTGTAGTTATTCTGACTTCCTGGGACTTTGAGagttattttctttgt
ttttcaactgTTTGAATGATTTTCTGAAAGATCGACACCAATGGGATTCA
AacccactaaatgtaaagttccGATAATAAGAAACCCAGAGCcaagccat
ttttcatgccctttaagcGTCCGGTTAtcttgaaattactaaaatattgg
taaaaacagcctttttagtggaaaaacactggaaaaagtgccctttttgg
ccaccaacggacgctaccttgcctttctaaaatatggcctgggAGCCCTG
CCTATCCACTGCGCTACGGATTCATACCAGCAGAAGATCGTTTCTAACGG
CTATTTATACTGTACGTACATACAAACTACAGAATTTACCATATTAAGAG
AAAATtgcaaaagagtgcttgtttcgagctctaaccctaaccctaactga
aaataacccaattcctagccaatctgatacataaccatacccaaccctac
taggttgcctgcaggtcctgacattGTCAGATCCGAAAAATATAGATGTG
TCTTTTGCTTTCATCATCAAGCATTATCCTGGCCAGACGATGCTTAACAT
CAATGGCATGGGTGCCTTAATCATATGTTTCTCTCTTCCCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00071834-exon-scaffold_63-1491911889:1239215..1240206 | TCONS_00071834-exon-scaffold_63-1491911889:1239215..1240206 | Clytia hemisphaerica | exon |
| TCONS_00071834-exon-scaffold_63-1510915933:1239215..1240206 | TCONS_00071834-exon-scaffold_63-1510915933:1239215..1240206 | Clytia hemisphaerica | exon |
| TCONS_00071834-exon-scaffold_63-1575043694:1239215..1240206 | TCONS_00071834-exon-scaffold_63-1575043694:1239215..1240206 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_63 | supercontig | scaffold_63:1239215..1240206 . |
Blast
The following BLAST results are available for this feature:
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