Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071819 ID=TCONS_00071819|Name=TCONS_00071819|organism=Clytia hemisphaerica|type=transcript|length=1419bp
AGAAAGTTTATCTCATACCCCTGAATAGGAAAAACCATAAACAAGAATGG
CGTTGGATCAATAGCCGCCAGTTCACGTTTGTGTTATGCTATCAAAATGC
ATTCACTAGCATAATATTTGTTACAATACATAGAAAACCTTACATTTGTA
GCACTCGTACGTGTTATACCCATTGATCTTTATGAACCCTGGACAAAACt
ctatccgccatctttgatcggagtttttttgaaagtgataccaatagggt
accacttttcaaaaaactccaatcaaagattttgcttggccggtctaggg
tatataaaggtcactATTTATTCCTACATACCCCTGTAAACTGTTATAGt
tggaaacttcaaaaaaataattgacagggaaagaaatttttttcattgcg
tATACACACACTAGTCAGTTTATATACCACAAGTTATAGACGATGAAACT
CTCTGATGAAACCTACCCAAACACACTTTTATGATAGGACCCGATCCatt
gacctttataaaccctggaccaagctatttCTGCCATATTTGATCATGGT
TTTTTTTtaagtggtacccgcaaagatTGTTAAAACTTTGCCTAGCGACA
AACGGGGCTATCACTTATGTGCAAGTGAAGTAGATTTAGCGCTGTCGATG
CGGGTACAACTTTAAAAATAAACTCAGAtcgaaatattttgcttggcggA
GATCCAGGGTAGCACGTACATCATACTTCGACAATAGACTATAAATTTAA
AGAGAAAATATCAACAACAACCTGACTCTGCTTATCTTCATCAAATCCTT
TCTAATTACGAAAGACGTTCTTCTCATTATGTTTTGTATACATGCGGTAG
AGAATCATTATGAAACTATTAACAATAactatttttcaagaaaaatgcaT
CATTGTATCTTTTTCGCTTCCTACTTTTGAAAGATAGGTTAAGCAGGCTT
TGGATATGGTCGAtttacagttgagtctccataactcgaacacgcacggg
gaacacaaatctGTTCAATTTAAGGAAATTTCTAGTCATGGAGTAAggct
tttataaggcattgttaacttaaAGGGACCATatgaaacttgttcgagtt
aaaggacATATTTGAGTTATAAAAGgtttgagttaaagagacttgTAATC
TTACTTAAGATATGTTCGAGCCAGCGTTTCGAAGATATTTTGATAGGATG
TGAAAGAAAGCTCAAGCCAGTCATTTCTATCTCTCAATGGCAGTTATGac
taatattttctttaaaaaatttcaccTGAATTTCATCTGAAAAGAGAGCT
TTCAGCGTTTAAAAATCAAAGCTAGGCATATTACGCTGAGAGTCTGCGAT
TTGCCATTCCTTACCAAACTCATCCTCTATTTCCATAGTCTACCATACCA
TAGATAATAGAACTGATAA Run BLAST on NCBI transcript from alignment at scaffold_63:698181..699599 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071819 ID=TCONS_00071819|Name=TCONS_00071819|organism=Clytia hemisphaerica|type=transcript|length=1419bp|location=Sequence derived from alignment at scaffold_63:698181..699599 (Clytia hemisphaerica)
TTATCAGTTCTATTATCTATGGTATGGTAGACTATGGAAATAGAGGATGA
GTTTGGTAAGGAATGGCAAATCGCAGACTCTCAGCGTAATATGCCTAGCT
TTGATTTTTAAACGCTGAAAGCTCTCTTTTCAGATGAAATTCAggtgaaa
ttttttaaagaaaatattagtCATAACTGCCATTGAGAGATAGAAATGAC
TGGCTTGAGCTTTCTTTCACATCCTATCAAAATATCTTCGAAACGCTGGC
TCGAACATATCTTAAGTAAGATTAcaagtctctttaactcaaacCTTTTA
TAACTCAAATATgtcctttaactcgaacaagtttcatATGGTCCCTttaa
gttaacaatgccttataaaagccTTACTCCATGACTAGAAATTTCCTTAA
ATTGAACagatttgtgttccccgtgcgtgttcgagttatggagactcaac
tgtaaaTCGACCATATCCAAAGCCTGCTTAACCTATCTTTCAAAAGTAGG
AAGCGAAAAAGATACAATGAtgcatttttcttgaaaaatagtTATTGTTA
ATAGTTTCATAATGATTCTCTACCGCATGTATACAAAACATAATGAGAAG
AACGTCTTTCGTAATTAGAAAGGATTTGATGAAGATAAGCAGAGTCAGGT
TGTTGTTGATATTTTCTCTTTAAATTTATAGTCTATTGTCGAAGTATGAT
GTACGTGCTACCCTGGATCTccgccaagcaaaatatttcgaTCTGAGTTT
ATTTTTAAAGTTGTACCCGCATCGACAGCGCTAAATCTACTTCACTTGCA
CATAAGTGATAGCCCCGTTTGTCGCTAGGCAAAGTTTTAACAatctttgc
gggtaccacttaAAAAAAAACCATGATCAAATATGGCAGaaatagcttgg
tccagggtttataaaggtcaatGGATCGGGTCCTATCATAAAAGTGTGTT
TGGGTAGGTTTCATCAGAGAGTTTCATCGTCTATAACTTGTGGTATATAA
ACTGACTAGTGTGTGTATacgcaatgaaaaaaatttctttccctgtcaat
tatttttttgaagtttccaaCTATAACAGTTTACAGGGGTATGTAGGAAT
AAATagtgacctttatataccctagaccggccaagcaaaatctttgattg
gagttttttgaaaagtggtaccctattggtatcactttcaaaaaaactcc
gatcaaagatggcggatagaGTTTTGTCCAGGGTTCATAAAGATCAATGG
GTATAACACGTACGAGTGCTACAAATGTAAGGTTTTCTATGTATTGTAAC
AAATATTATGCTAGTGAATGCATTTTGATAGCATAACACAAACGTGAACT
GGCGGCTATTGATCCAACGCCATTCTTGTTTATGGTTTTTCCTATTCAGG
GGTATGAGATAAACTTTCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00071819-exon-scaffold_63-1491911889:698181..699599 | TCONS_00071819-exon-scaffold_63-1491911889:698181..699599 | Clytia hemisphaerica | exon |
| TCONS_00071819-exon-scaffold_63-1510915933:698181..699599 | TCONS_00071819-exon-scaffold_63-1510915933:698181..699599 | Clytia hemisphaerica | exon |
| TCONS_00071819-exon-scaffold_63-1575043694:698181..699599 | TCONS_00071819-exon-scaffold_63-1575043694:698181..699599 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_63 | supercontig | scaffold_63:698181..699599 . |
Blast
The following BLAST results are available for this feature:
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