Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071814 ID=TCONS_00071814|Name=TCONS_00071814|organism=Clytia hemisphaerica|type=transcript|length=1488bp
ATATAGCTCAGGGAAATAAAACTTAATTGGTTGGACAAGGAAAAGTAACT
CTAACGGGTCCACATCAATTTATTTCACTTTTTAGCTAGCTTCAACGTGG
AGACAGTTTATTTAGAGTTTTAGATTCTTTTTATTGTTCGTGTCAATTTG
CTGTAAAATCAGCTAAATTTGAAGGGGACTTCTTTACACTTTTTCGAGAA
AGCTGTCTGGCTGAAAGAGGAGTCTTCAACCACAAGAAACTACTCTAAGA
AATCAATTATGCTGAGCGTTTAGACAGGCAAGGAGAACGTACATAATTTA
ATCGTCAGGACTGGTCAGGAGAACGTACACGATTAGTCAGGAGAGCATAT
TCCAAATTTTCACTGTAATGCCTTCATCTTTGACCAGCATTTCAAATGAA
AGCTCGGTGACTAGCAAATCAACATTTATTGGTAGCAAGGGTAATAAACT
GATGCCAAAATCCTCTTACGCATTGCCAAGTGGCAGTAAAAAGTCTATGT
ATTCAATATCGTATGGCATACCTGCAAACAATGGAAAATTAATTAACAGT
GGTAAGCGCAATGCATTGGCCTCCATGACGTTGGCAAGATGATTGTCTCG
CAACTATTCATGACcctataggccatttcacagtccaaatggatcatggg
taatcttcaaaaaattttggaccAATAAAAAGTCGTCATTATTGCGTCAC
TAGTGGTCCTggttacccattacgctttgcgactgtgaaatggcctattg
taTTCTGACATTACGTCTCTCACAACAGTTGGCTCAAGTAACGTATTGGA
TAGAAACGAAGTATCTGTATGTAAATTatagtcattgcagtggtgcataa
tGAATTTGAGTAAAACGCGTGATCAACGCTTTAATGTGCTCACATATATT
TGGCTTCAACCGATTTGTCAAATGTGgtaaaagaatcaataaaaTACAAA
GACAATCTTCAACTTTTCCCAATTCGATAGGAAAGAAGCCTTTTTCGTGT
ACACCTTGGAAAGTTCAAAATTACGTGTCTCGGCTTCATGGGGAAGGATC
TCGAGTTGCAGTTTACAGCTTAAACACCCCTGGTTTTTTTGTatacaata
tttttatttttatctatgATTTTTATGTATAAATATTGTACtacattaaa
ggttttgttttataagagtgatatcacttgcttactcgtcaattttaatt
cgcAAGCTTTTTCTTATTGAATAGACAcgggtgtggagcaagattggtca
gaaagaggaaaaagaaaacattttttgcttatatcagcataatataacag
aaggcagacactgtcctgatatgaaatatgtgactgatatgaaatgggaa
cacttatgtaaaaccTTTAGACTACTAAAGGGGTTCTTTTTAGCAAGTAG
AGGCCCAGATTGTTATAGTAAGAAAATTTAAtgcaaaatttttctttctg
aaaGAACTCAAACAAAGTATTACTTTCATACAGCTAGC Run BLAST on NCBI transcript from alignment at scaffold_63:508845..510332 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071814 ID=TCONS_00071814|Name=TCONS_00071814|organism=Clytia hemisphaerica|type=transcript|length=1488bp|location=Sequence derived from alignment at scaffold_63:508845..510332 (Clytia hemisphaerica)
GCTAGCTGTATGAAAGTAATACTTTGTTTGAGTTCtttcagaaagaaaaa
ttttgcaTTAAATTTTCTTACTATAACAATCTGGGCCTCTACTTGCTAAA
AAGAACCCCTTTAGTAGTCTAAAggttttacataagtgttcccatttcat
atcagtcacatatttcatatcaggacagtgtctgccttctgttatattat
gctgatataagcaaaaaatgttttctttttcctctttctgaccaatcttg
ctccacacccgTGTCTATTCAATAAGAAAAAGCTTgcgaattaaaattga
cgagtaagcaagtgatatcactcttataaaacaaaacctttaatgtaGTA
CAATATTTATACATAAAAATcatagataaaaataaaaatattgtatACAA
AAAAACCAGGGGTGTTTAAGCTGTAAACTGCAACTCGAGATCCTTCCCCA
TGAAGCCGAGACACGTAATTTTGAACTTTCCAAGGTGTACACGAAAAAGG
CTTCTTTCCTATCGAATTGGGAAAAGTTGAAGATTGTCTTTGTAttttat
tgattcttttacCACATTTGACAAATCGGTTGAAGCCAAATATATGTGAG
CACATTAAAGCGTTGATCACGCGTTTTACTCAAATTCattatgcaccact
gcaatgactatAATTTACATACAGATACTTCGTTTCTATCCAATACGTTA
CTTGAGCCAACTGTTGTGAGAGACGTAATGTCAGAAtacaataggccatt
tcacagtcgcaaagcgtaatgggtaaccAGGACCACTAGTGACGCAATAA
TGACGACTTTTTATTggtccaaaattttttgaagattacccatgatccat
ttggactgtgaaatggcctataggGTCATGAATAGTTGCGAGACAATCAT
CTTGCCAACGTCATGGAGGCCAATGCATTGCGCTTACCACTGTTAATTAA
TTTTCCATTGTTTGCAGGTATGCCATACGATATTGAATACATAGACTTTT
TACTGCCACTTGGCAATGCGTAAGAGGATTTTGGCATCAGTTTATTACCC
TTGCTACCAATAAATGTTGATTTGCTAGTCACCGAGCTTTCATTTGAAAT
GCTGGTCAAAGATGAAGGCATTACAGTGAAAATTTGGAATATGCTCTCCT
GACTAATCGTGTACGTTCTCCTGACCAGTCCTGACGATTAAATTATGTAC
GTTCTCCTTGCCTGTCTAAACGCTCAGCATAATTGATTTCTTAGAGTAGT
TTCTTGTGGTTGAAGACTCCTCTTTCAGCCAGACAGCTTTCTCGAAAAAG
TGTAAAGAAGTCCCCTTCAAATTTAGCTGATTTTACAGCAAATTGACACG
AACAATAAAAAGAATCTAAAACTCTAAATAAACTGTCTCCACGTTGAAGC
TAGCTAAAAAGTGAAATAAATTGATGTGGACCCGTTAGAGTTACTTTTCC
TTGTCCAACCAATTAAGTTTTATTTCCCTGAGCTATAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00071814-exon-scaffold_63-1491911889:508845..510332 | TCONS_00071814-exon-scaffold_63-1491911889:508845..510332 | Clytia hemisphaerica | exon |
| TCONS_00071814-exon-scaffold_63-1510915933:508845..510332 | TCONS_00071814-exon-scaffold_63-1510915933:508845..510332 | Clytia hemisphaerica | exon |
| TCONS_00071814-exon-scaffold_63-1575043694:508845..510332 | TCONS_00071814-exon-scaffold_63-1575043694:508845..510332 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_63 | supercontig | scaffold_63:508845..510332 . |
Blast
The following BLAST results are available for this feature:
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