Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071811 ID=TCONS_00071811|Name=TCONS_00071811|organism=Clytia hemisphaerica|type=transcript|length=1121bp
TGCTTGtatatgcaatatttcagccaatcagagactttctcgacgttttt
cgtgacttttttacatgaatccgctAATAGGAAATACGTGTATTGATAAT
AACGTAACCCGACAAAAGTGTTCCTGAATATTTCGTGAAAATTTTCGTAC
AGTTTTATTATAGAATTATTATCAGATAGAATGAATTCATGGTGAGATAt
tattctatctgataacaGTTCACTGGTTTTATTTTTACGAATGGACACTG
TAAAGAATGTAGAGtataccacagatatctgtaaagcccgaagggctaga
tttgcggccttgttcaaaaagtgaagctcatctttggaaggatttcctac
cagagtcacgtgactaaaatatgcaatttcaccggtttgagagatgtgaa
atagcgtttgccgcctacgttttttgatctcgcgctccgaaaacaaNNNN
NNNNNNNtatccatcggcacgaaatttaaaaagtcaaatttttgcttcac
ttttttttgctggagaaagcttaaagttgcctatctagcccttcgggctt
agatatctgtggagTATACTAATATTGTGTGTACAAATGATTGAATAAGT
AGAAAATTGGCAGTGCATTACTGCGGGAATGCAAAGCGACGGTAGTAATC
TGAAAAAGCAGAATTAAGAATCTTTTTAAGTTTACTATATTCACAATTTG
GTAATCGTAATTTTCTAACAAAGAACGCATTCTAAAATAAACTTTAAAAT
TCCCTCCTGAAAattatataaatatttattaGCTTAATGtaagaaatttt
agcgggaataAATTTACACGGTACTTAATAAACCGCGAAATAAAATTACG
CAAAAATTtgttccgcaaaattttctcccTCCAGGTAAATTGTTGTAGTT
TTATATgtagatttaatttttttactatCTTGACATTGTATATACTTTTA
TACGCATACATAATTTGGGTAAAATATATTTATTAGTAAAAGTAGCTTAA
TTTCATACTAATTGTTGTGGACACACGTTTTTGGTCCTAACTGGaggttt
tataaataaaaagtcaatttaCTCATAAAGAAACTTTCTTCAATTGTCCG
TCCCGTCGAATGGTCGTTATC Run BLAST on NCBI transcript from alignment at scaffold_63:251319..252439 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071811 ID=TCONS_00071811|Name=TCONS_00071811|organism=Clytia hemisphaerica|type=transcript|length=1121bp|location=Sequence derived from alignment at scaffold_63:251319..252439 (Clytia hemisphaerica)
GATAACGACCATTCGACGGGACGGACAATTGAAGAAAGTTTCTTTATGAG
taaattgactttttatttataaaacctCCAGTTAGGACCAAAAACGTGTG
TCCACAACAATTAGTATGAAATTAAGCTACTTTTACTAATAAATATATTT
TACCCAAATTATGTATGCGTATAAAAGTATATACAATGTCAAGatagtaa
aaaaattaaatctacATATAAAACTACAACAATTTACCTGGAgggagaaa
attttgcggaacaAATTTTTGCGTAATTTTATTTCGCGGTTTATTAAGTA
CCGTGTAAATTtattcccgctaaaatttcttaCATTAAGCtaataaatat
ttatataatTTTCAGGAGGGAATTTTAAAGTTTATTTTAGAATGCGTTCT
TTGTTAGAAAATTACGATTACCAAATTGTGAATATAGTAAACTTAAAAAG
ATTCTTAATTCTGCTTTTTCAGATTACTACCGTCGCTTTGCATTCCCGCA
GTAATGCACTGCCAATTTTCTACTTATTCAATCATTTGTACACACAATAT
TAGTATActccacagatatctaagcccgaagggctagataggcaacttta
agctttctccagcaaaaaaaagtgaagcaaaaatttgactttttaaattt
cgtgccgatggataNNNNNNNNNNNttgttttcggagcgcgagatcaaaa
aacgtaggcggcaaacgctatttcacatctctcaaaccggtgaaattgca
tattttagtcacgtgactctggtaggaaatccttccaaagatgagcttca
ctttttgaacaaggccgcaaatctagcccttcgggctttacagatatctg
tggtataCTCTACATTCTTTACAGTGTCCATTCGTAAAAATAAAACCAGT
GAACtgttatcagatagaataaTATCTCACCATGAATTCATTCTATCTGA
TAATAATTCTATAATAAAACTGTACGAAAATTTTCACGAAATATTCAGGA
ACACTTTTGTCGGGTTACGTTATTATCAATACACGTATTTCCTATTagcg
gattcatgtaaaaaagtcacgaaaaacgtcgagaaagtctctgattggct
gaaatattgcatataCAAGCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00071811-exon-scaffold_63-1491911889:251319..252439 | TCONS_00071811-exon-scaffold_63-1491911889:251319..252439 | Clytia hemisphaerica | exon |
| TCONS_00071811-exon-scaffold_63-1510915933:251319..252439 | TCONS_00071811-exon-scaffold_63-1510915933:251319..252439 | Clytia hemisphaerica | exon |
| TCONS_00071811-exon-scaffold_63-1575043694:251319..252439 | TCONS_00071811-exon-scaffold_63-1575043694:251319..252439 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_63 | supercontig | scaffold_63:251319..252439 . |
Blast
The following BLAST results are available for this feature:
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