Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071810 ID=TCONS_00071810|Name=TCONS_00071810|organism=Clytia hemisphaerica|type=transcript|length=875bp
CGTACAGAGAAATTATTAACTTTCCAAAATTTCACGATGGGTATTTTATA
AGTGGAAATTCACAGCTCCAACCTTAGCTATTTGTATAAAAGAACAAGGC
ATATTTATAGCGCTGTGGTTTCTAGATATTTCTAGTATTTTATAGGCCAG
GTATTTTGTCTCCTTGTCTCTGTTTCTGTTCGGCATCTCTACATTCAAAA
TGGTCTTGTCAAATGAGGATGTGCAGGCCATGTACAGAAGCGTGTTAGTG
AGcggatccaaaatataaagACAAACTAAAAAGGCATGAAACTTAAAGAT
GGGAAAGGCATTGGTCGTGCAAAAGACAGGCTTACATTTATATAGTAATA
AACACTCTTCAAACCACTATGGATGACGCATGACCTTTACATCCGACGTT
TGTATAAAACCGAACGCACCAAGAGCAATGTTGATATTATCCACCGCCTT
CAAAAGAAGTTTCTAAGCGAAGAGAAAGTTGACTTGGAAAATTTGTCCAA
GTTGCAATTAACTTAAATAATTTTGAACAACAACCTTGGCAACAGCAAAC
ACAAAAGCAAGTTACAAACAGCACTCCAACGTCTAATAATTTTTTGGGAA
TAAACCCACTTGGTTTTTTAGAGAGTAGTACCAGTAGTACTGGGTCTCCT
GGCTTTGTTAATGAATTAAACAACAATTATGGATATTGGAATAATTCAAA
TAACAATACACCATCAAATTCTGTTACCAATAACCAAAGAATGTTTCTAC
TTAGAAATCCCTCGAGCATTGCGAGGGTTAGGCCCGTATCGACTAGCCCC
TGGATATCAACACTTTTTCGAAGGAAATGGAACAGTTGGTCAGTTGAAAA
ACTTTAACCAGCTTTACTATGTCAA Run BLAST on NCBI transcript from alignment at scaffold_63:118973..119847 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071810 ID=TCONS_00071810|Name=TCONS_00071810|organism=Clytia hemisphaerica|type=transcript|length=875bp|location=Sequence derived from alignment at scaffold_63:118973..119847 (Clytia hemisphaerica)
TTGACATAGTAAAGCTGGTTAAAGTTTTTCAACTGACCAACTGTTCCATT
TCCTTCGAAAAAGTGTTGATATCCAGGGGCTAGTCGATACGGGCCTAACC
CTCGCAATGCTCGAGGGATTTCTAAGTAGAAACATTCTTTGGTTATTGGT
AACAGAATTTGATGGTGTATTGTTATTTGAATTATTCCAATATCCATAAT
TGTTGTTTAATTCATTAACAAAGCCAGGAGACCCAGTACTACTGGTACTA
CTCTCTAAAAAACCAAGTGGGTTTATTCCCAAAAAATTATTAGACGTTGG
AGTGCTGTTTGTAACTTGCTTTTGTGTTTGCTGTTGCCAAGGTTGTTGTT
CAAAATTATTTAAGTTAATTGCAACTTGGACAAATTTTCCAAGTCAACTT
TCTCTTCGCTTAGAAACTTCTTTTGAAGGCGGTGGATAATATCAACATTG
CTCTTGGTGCGTTCGGTTTTATACAAACGTCGGATGTAAAGGTCATGCGT
CATCCATAGTGGTTTGAAGAGTGTTTATTACTATATAAATGTAAGCCTGT
CTTTTGCACGACCAATGCCTTTCCCATCTTTAAGTTTCATGCCTTTTTAG
TTTGTctttatattttggatccgCTCACTAACACGCTTCTGTACATGGCC
TGCACATCCTCATTTGACAAGACCATTTTGAATGTAGAGATGCCGAACAG
AAACAGAGACAAGGAGACAAAATACCTGGCCTATAAAATACTAGAAATAT
CTAGAAACCACAGCGCTATAAATATGCCTTGTTCTTTTATACAAATAGCT
AAGGTTGGAGCTGTGAATTTCCACTTATAAAATACCCATCGTGAAATTTT
GGAAAGTTAATAATTTCTCTGTACG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00071810-exon-scaffold_63-1491911889:118973..119847 | TCONS_00071810-exon-scaffold_63-1491911889:118973..119847 | Clytia hemisphaerica | exon |
| TCONS_00071810-exon-scaffold_63-1510915933:118973..119847 | TCONS_00071810-exon-scaffold_63-1510915933:118973..119847 | Clytia hemisphaerica | exon |
| TCONS_00071810-exon-scaffold_63-1575043694:118973..119847 | TCONS_00071810-exon-scaffold_63-1575043694:118973..119847 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_63 | supercontig | scaffold_63:118973..119847 . |
Blast
The following BLAST results are available for this feature:
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