TCONS_00071808 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071808
Unique NameTCONS_00071808
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length175

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071808 ID=TCONS_00071808|Name=TCONS_00071808|organism=Clytia hemisphaerica|type=transcript|length=175bp
AATAGGAGGCTAGactcaaaaaatgctaaagAATTGCACAAATAATTTCC
ACACCTACAGATTAACTTTCTGGAATCATTTTCCAGTCGGGTCCATCTGC
ATTAGCAGCAAGAATTGGTGGCGGCAATTACCGGCCAGACCcgactgttt
gtttacatttgttcgAACCGAGCCG
Run BLAST on NCBI

transcript from alignment at scaffold_63:89150..89324

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071808 ID=TCONS_00071808|Name=TCONS_00071808|organism=Clytia hemisphaerica|type=transcript|length=175bp|location=Sequence derived from alignment at scaffold_63:89150..89324 (Clytia hemisphaerica)
CGGCTCGGTTcgaacaaatgtaaacaaacagtcgGGTCTGGCCGGTAATT
GCCGCCACCAATTCTTGCTGCTAATGCAGATGGACCCGACTGGAAAATGA
TTCCAGAAAGTTAATCTGTAGGTGTGGAAATTATTTGTGCAATTctttag
cattttttgagtCTAGCCTCCTATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044576XLOC_044576Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071808-exon-scaffold_63-1491911889:89150..89324TCONS_00071808-exon-scaffold_63-1491911889:89150..89324Clytia hemisphaericaexon
TCONS_00071808-exon-scaffold_63-1510915933:89150..89324TCONS_00071808-exon-scaffold_63-1510915933:89150..89324Clytia hemisphaericaexon
TCONS_00071808-exon-scaffold_63-1575043694:89150..89324TCONS_00071808-exon-scaffold_63-1575043694:89150..89324Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_63supercontigscaffold_63:89150..89324 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00071808 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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