TCONS_00071795 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071795
Unique NameTCONS_00071795
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2252

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071795 ID=TCONS_00071795|Name=TCONS_00071795|organism=Clytia hemisphaerica|type=transcript|length=2252bp
cacattggattgacacggatgtggaacaAGATTGGTCATACTgaggaaga
gaaaaacatttttgtttgtatcagcataatataacaatagggagacactg
tcctggtatgaaatatgtgtctgatatgaaacgggaacacttatgtaaaa
agaaaacctttaagtgaaaatttgataacCATGATAGAAATTATAGACTC
CTGTTTTGAACTATTTGACTTTTGCTTTCTTTTACATCAAGGATGGGTTC
TTAGAGTATTTAATTAAAAATAACTTAGAAAAAGAGTCATCCATTGACTC
TTATTCTCTAAAACCATGCCAAACATACCTGATCAGCTCCCGTCATGCAA
TGGGCATTATTCACATCACATGACTAAACACGTGACATCACGAATAACGT
CATCATCAACAGCCAATCAAAACATGGAAGAATTTATGATAAGCATTAGA
AAAGATGCTGAAGCAGCAACGGCGCTAGCTGAACGTTTAAAACCTGATTT
GGTGAAAGGCTTTGTGGATATCATTGAAAAATGTAATGGCTGTTTGATAA
CATCTGGAATAGGTAAATCAGGCATTGTTGCTGAAAGGATGTCAAGATCA
TTATCATCTACAGGGACACCTGCTCACTATGTACACGGTGCTGAATGGAC
ACACGGCGATCTAGGTAAAGCAAGACGTGGCGACGTTTGCGTGTTCTTCT
CGCATAGCGGTAATACACGTGAATGCATATTCGCGGCTTCCCACTTACGT
TTACGTGGAGTACATATTTTATCTGTCATTGGGCATGATGATTGCAAGTT
AGCTGAGAGTAGTGATGCATTCATTTCTTATGAATTGGAAAACGATCTTG
AAGAACCAATAGGAGGCGTTCCAACCACGAGTGTAGTTCTTCAGGAGATG
ATAATTAATGCAGTTGTTTGTGAATTAATAACACGAAAACGATTCAGTAA
GATCGAGTTTGCAAGAAACCATCCAGgagAGATAGATTtccatcgaataa
gagagcgtatCGAATCGTTTGccagagtttcttgttgacggtgactttca
atatcatTGAATATTAATGGAGCATATTTAATAGTgaaatgtcgaattag
agagcctCGGCTGTATGTTATCTCCAACGATTTTAGGAATATACACAATT
TGTCTTTGGCATATTTACAATCTTTAGGGAGTGCATTGGGGGTTTTCGta
acccttaaagagacttttgAGGATGTAAAAATGGAATTCTTATACCCTCG
CaaatacccggcacccattttttCCTAAAAGCCCTCTCCCCTAGCTTACG
TATTCTTACTCAATTTTATTGGTTATTGGAGGGGTACAAATCTTTGAATT
CAATCATGTTCATTATTCAATCTATGAAGCACTAAAATAGacaacaaatt
attttctttcttagCTAGAAAAGCACAATTTTCATAGACAATTTGATAgg
atattttgtattttgtgcaggaaatttccaaaatttataaCTTTTATTAT
GGTGGTGTATTTATTTATTAATATAATATGTGCAAAATATTATCTCTTTA
AGGCTGataaattcaattttgaaatacaaatttcatttaatatatacaat
ttaacaatttttaCAAAGTTAGAAACGTactgaaatgaaaataagagTAA
AATCAAGtgcaaactgctcaaaatgaagacaagacaagaaacaaatttta
caaatttcacgGACATctcaaaaatacctttaaaggtCAATTGTTTTTGG
ACAAATACTGTATAACACGGCTTCTAAAACTTTCTAAAActaaatctaaa
agttttacttttgtagatcgaaaaacaaaatttatggTGCGAGACATTTC
GGTGAGTGGCACGTCTTTATTATGGAAATTTTCTTAAATACATGCCCAGA
AAGAATGTTAGTCTTACAAGGGTGTTACAATTTCATTAGAAATTTACTAT
ACTTTAGTCACAAATTTTCGAGATATTACAAATACAAACAGTATAGGCCA
TTTTACAGTAAACGCAATTCGTAATGGGTGAACAAGATTTTGCGAGAAAA
AAAACGACTTCTTATTGGTCCAAGATTTCTGAGATTTTTGAGACCTACAG
GAATTGGTTATAAAAACGCAATTAAGTCCTGATTAACCATGATTCATTGC
AACTGCAAAATTGCCTatcataggccatttcacattcgtaaagcgtaatg
ggtaattaGGACCACTGCACGCCAATGACGACTTtttattggtccaaagt
tt
Run BLAST on NCBI

protein sequence of TCONS_00071795-protein

>TCONS_00071795-protein ID=TCONS_00071795-protein|Name=TCONS_00071795-protein|organism=Clytia hemisphaerica|type=polypeptide|length=240bp
MPNIPDQLPSCNGHYSHHMTKHVTSRITSSSTANQNMEEFMISIRKDAEA
ATALAERLKPDLVKGFVDIIEKCNGCLITSGIGKSGIVAERMSRSLSSTG
TPAHYVHGAEWTHGDLGKARRGDVCVFFSHSGNTRECIFAASHLRLRGVH
ILSVIGHDDCKLAESSDAFISYELENDLEEPIGGVPTTSVVLQEMIINAV
VCELITRKRFSKIEFARNHPGEIDFHRIRERIESFARVSC
Run BLAST on NCBI

transcript from alignment at scaffold_63:1200441..1206806-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071795 ID=TCONS_00071795|Name=TCONS_00071795|organism=Clytia hemisphaerica|type=transcript|length=6366bp|location=Sequence derived from alignment at scaffold_63:1200441..1206806- (Clytia hemisphaerica)
CACATTGGATTGACACGGATGTGGAACAAGATTGGTCATACTGAGGAAGA GAAAAACATTTTTGTTTGTATCAGCATAATATAACAATAGGGAGACACTG TCCTGGTATGAAATATGTGTCTGATATGAAACGGGAACACTTATGTAAAA AGAAAACCTTTAAGTGAAAATTTGATAACCATGATAGAAATTATAGACTC CTGTTTTGAACTATTTGACTTTTGCTTTCTTTTACATCAAGGATGGGTTC TTAGAGTATTTAATTAAAAATAACTTAGAAAAAGAGTCATCCATTGACTC TTATTCTCTAAAACCATGCCAAACATACCTGATCAGCTCCCGTCATGCAA TGGGCATTATTCACATCACATGACTAAACACGTGACATCACGAATAACGT CATCATCAACAGCCAATCAAAACATGGAAGAATTTATGATAAGCATTAGA AAAGATGCTGAAGCAGCAACGGCGCTAGCTGAACGTTTAAAACCTGATTT GGTGAAAGGCTTTGTGGATATCATTGAAAAATGTAATGGCTGTTTGATAA CATCTGGAATAGGTAAGCTGTTCGATATGTCCTTCAATTTAAGGCATTCA ATTTAACTGGCAGTAAGTTTAATCTCTTGGTATACCCCTGTCGCAGTGCC GTTTGAAACCCCTTTTACATTTTCTAGATTCGACAAAGAAAAACTAGTAA TTAAAACTTTCGTTGGCATGGCTGATTTGTATCTTTGGTGAATAGAGATC TCTAAAAAGATATGCCTCCCTTTCAAAGCAACTGACTGAGGTTGCCCCTC CAATAAATTCCTATTGGTTGATGTTGGTTAATTGTTTATACATATCTGTA GTTGACGAACAGAGTTCATTTGACTTTTCATGGGTTTCTTACCCTTAAAG GGACCCAAAAAGGGGAAAATCTTGACCCTTGGAGAGATTATTTTGACTTT CTGTTGCTTTTTGTAAGCCTTTAGAATCTTTTATAATATTTATACAGGTA AATCAGGCATTGTTGCTGAAAGGATGTCAAGATCATTATCATCTACAGGG ACACCTGCTCACTATGTACACGGTGCTGAATGGACACACGGCGATCTAGG TAAAAAATCTCTGCTACATAAAATCATAATATTTGTCATAATATTTCATA AGAAAGAGAGTTCCCTGCAAAATTTTAAAACACAGCAAATATTCCCAAAA ATCTCAATATATTTTGAACTTTCTTGTACTCCCTATTATTGTGATTATAA TTCGTATTGAATATTCAAATACCCTTTTTTCTCCAGTGCAAAACCCCCCC AAATGTATACTAGCCTATTTAGGGTTCTCGATTTATTACATGATATTTTT TTACGTTATTGCAGTAATCAATTTTCTATGGCTGAGCACTTTTTTGCGAA TTGAGATTATGATTATAAAAAAGCAAAATTTAACTTTCCATTTGCCTATG ACCTAGATTAGGGGTAGAAACCAATTAAGTAGTCAGACGGCTGAGAAGTA AGTGTGAGTCGGTAGATATAAGTTTGGCATGACATTATGGCTAATCCTCG AATAAGAAGTTTTGGGGAAAATTTGTCCCGATAAATACAATATTAGTATA AATAAGTGAGGATCGCCTACAACCATAACTGCAGGGAGGGAGGGAGGTAA AAAATATTTCATCCTGTCAGCTTTCAGTTAGAGCATCGACTTGAACAGGG AGTTGCGATAGCCATTATGAACATGGCGTCACGTGGTTATTAGCAAAGTA GACTCAGTTGGCAGAGGGCGGCCACCCAGCAATTCCAATACTGTGGCGCT TATCAAATAAAAGTTAAACCACGATTTAACCTGTGTTAAATCCAAAACAA TGGAAAAAAGTTCTGAAATTCCCAAGTCAATTGAATGATGAGAAAATAAG TTTTTTTTAACTTTTTCTCGAAGGGAAATCTGCACATTATTTGTGCACCC CCCCCCTTTAAATTGAATTGATAAAAAGCTGTAACAAAGCACGACATAGG CGAAGCGAGATACCCTGCAAAATTTATGAGGGAGTGCAGACGTTTATGAC ATCTTTTGATAAAACAAAGATAACAATTACAGTGTCGTAAAAACTGCTCT CATCCATAAATTTTGCAGGGTATCCCGCTACGCCTATGCACGATATCTAT ATCACGATATGAAATCTCAGGACAATGTTAATGAGAAAGTCAAATCTTAA CACTTTTGATTATCTTTCCAGGTAAAGCAAGACGTGGCGACGTTTGCGTG TTCTTCTCGCATAGCGGTAATACACGTGAATGCATATTCGCGGCTTCCCA CTTACGTTTACGTGGAGTACATATTTTATCTGTCATTGGGCATGATGATT GCAAGTTAGCTGAGAGTAGTGATGCATTCATTTCTTATGAATTGGAAAAC GATCTTGAAGAACCAATAGGAGGCGTTCCAACCACGAGTGTAGTTCTTCA GGTTTGTATTAAAATGATTTTTTATAAGAATACAACCCTGTGTCACAAAC CCGCTGGGACTCAAGCCTCACTGGAAAATTTGGCAAAAATTTCATCCCCG GTGGTAAAATACCCTGGAATTTCAGCCCTACTGGGAATTTGACTTTGATT TCATCCCCTTGAGCTCCATAATGTTTAAAAATATAATTTCACTCCAAAAC CATCTCCACTGGGTTTTCTAACCTCGGAACAATAAAATTTCTATCCCCAT CGAGATTTCAATAGGAGTTTTTATCCCCGCTTAGGAAAAAGTTCCACCGG GGCTTTGAGACAGGGGTGTAAGAATGCACTCTATTGGCAAACGACAGGGA CAAGTGGAGTGATATAATAATGATTTAATCACTTTCAAGTGGATGAATCA TAATGTAGAACACCCTATAAGAGACACACGCGATAAACTTTCTTACAGTT TGTCTCCACAGCTTAATTTCAAAGAAAGCTAGGCTGTGGTGTTCACAGTA ATTATCCCTCCGTAAAAATATCATTATTATTAAAATATAAAGCTTTGTGA TTTCAGTATACTGTCCACTGTTTTTAAAAAGTTGTTCGAAATTTTCAAAG CAACATATCTGCACAGCCCCCTGGAAAATTTGGCCTAAATTTGGCCCCCT ATTGTAAAATTACCCTACAGTTTTAGCCCCACCGGGAAATTGACTTCGAT TTCATCCAAATTTGAAATTCAAGGGTAGATTTGTACTCCAAAATCATCCC ACTGGATTTTTTGACTTAGGAACAATGGAAACTGTCCACTGAGATTTAGA TAGAAATTTTATCCCCACTGGGTGAAAAATTCTCACCGGAGCTGTGAGAC ATGGCTGTGTAGTTTATATTCGCAAGTGTAGCGTAGTGGTTATCGTGCTT GACTTCTGTCCAGTAGGCCCAAGTTCGATACTCACCGTGGCACTACGATT CATTTGGCAAGTGAATGTTCCTTCGCTCGGGTCAACCCATGCCATATTAG GCTAATAGGGTACCATAACTCTAATACAAGAGTATGGGTAGATATTCCAG ATAGTGTGGTGTGCTGAGACACTTAGGNCACTGGGTGAAAAATTCTCACC GGACCTGTCAGACATGGCTGTGTAGTTTATATTCGCAAGTGTAGCGTAGT GGTTATCGTGCTTGACTTCTGTCCAGGAGGCCCAAGTTCGATACTCACCG TGGCACTACGATTCATTTGGCAAGTGAATGCTCCTTCGCTCGGGTCAACC CATGCCATATTAGGCTAATAGGGTACCATAACTGTAATACAAGAGTATGG GTAGATATTCCAGACAGTGTGGTGTGCTGAGACACTTAGGCGTTTCTACA CCTGCGAGGACATCCGTTCTCTCATGTAGATCGAGTGTCATGGTATCTTA TAGGGGAAAAAATATCGGAATTTTATTTAGTCGGTTTTTTTTTTCGTCGG GGAAAAATTTCATCACCTAGAGGCATTTTCGTCACTTTCCCTCGACCAAA ATTTCAAATTCGTCACTTTTCCCCGACGAAATTGTTCACTTTCATTTTCA CTTTCACCCAATTAAATTGTCCTAATGAAATGGTTTCCTTCACTAGTTTG AAAAAAGATCTTGTAATTCGACGTTTAAAGCACTAATTTCGATTAATAAA CGTCCAAAAAATTTGGATTTTGATTTTGGTTGGGGTTTGAAAAATCGGGT AAAAGTTTTGGTCGGGGATAAAAAAATCGGGTAAAACTTTTGGTCGGGTG ATAAAATATCGGGGAAAAAATTCGTTGGGGGAAATTTTGTCACCCCCTTA AAATGTTCGTCACTTTTCCCCGACATTTTTTCCCCGATAAGGTATACGCC ATGGCTCGGAAGCTCGTATCTGTAGGGTAGGAATGTCTGATTGCACTGTG ATTCCTACTGCAACCAGAGGTAGGACCTCGTTGGTAGGACCCATTCCAAT GCATCGGAAGGAATATCTATCTATCTAATGTAGTTTTTCGAACTTTCTTT TTCCACAACTTTTCCATCTTTCAGGAGATGATAATTAATGCAGTTGTTTG TGAATTAATAACACGAAAACGATTCAGTAAGATCGAGTTTGCAAGAAACC ATCCAGGTGGGTCACTTGGTGTCAAACTTTGTCAGCCCTCTATTGATATG AATGATGAGAACCAATGAAATCTATTTATTTCTATTCTCAGCTGGCACAC AACGTTGTTCTAACGTTATAACCCGAGGGGGGTATTTAGGCAAATGGAGG GTACGATATGCACCGCCCTTAAGGGTACCTTTTTTGGATTTCCAAAGTCT CGCTAAGGGTCGAGAAAATCAGAAAATCAAATTTCAGTCCCACTAAGGGT AGGAGAAATAGGAAAATTCCAACTTTTTACCCCAAGAAAGATCGAAATTT GGTCAAAATTGGTCAAATTTGTAAGGGTTGTAAAATTCACAAAATTTTCC TTTGTTTTCTCCTTTTTAGTCCCGGTAATGGTCTGAGGGTCGAAAGTCGG GCGGCACCCCCTGTAAGCTCGCAACCCTAGTACCCCGGGCGTTATAAGGA CGTTGTGATCATTAGATAAACGTTAAACAGACGTATTGTGCCAGCTGGGA TACATAGTATAGTTGACGCTTTTTTAATTCAATTTTCAAGGAGAGATAGA TTTCCATCGAATAAGAGAGCGTATCGAATCGTTTGCCAGAGTTTCTTGTT GACGGTGACTTTCAATATCATTGAATATTAATGGAGCATATTTAATAGTG AAATGTCGAATTAGAGAGCCTCGGCTGTATGTTATCTCCAACGATTTTAG GAATATACACAATTTGTCTTTGGCATATTTACAATCTTTAGGGAGTGCAT TGGGGGTTTTCGTAACCCTTAAAGAGACTTTTGAGGATGTAAAAATGGAA TTCTTATACCCTCGCAAATACCCGGCACCCATTTTTTCCTAAAAGCCCTC TCCCCTAGCTTACGTATTCTTACTCAATTTTATTGGTTATTGGAGGGGTA CAAATCTTTGAATTCAATCATGTTCATTATTCAATCTATGAAGCACTAAA ATAGACAACAAATTATTTTCTTTCTTAGCTAGAAAAGCACAATTTTCATA GACAATTTGATAGGATATTTTGTATTTTGTGCAGGAAATTTCCAAAATTT ATAACTTTTATTATGGTGGTGTATTTATTTATTAATATAATATGTGCAAA ATATTATCTCTTTAAGGCTGATAAATTCAATTTTGAAATACAAATTTCAT TTAATATATACAATTTAACAATTTTTACAAAGTTAGAAACGTACTGAAAT GAAAATAAGAGTAAAATCAAGTGCAAACTGCTCAAAATGAAGACAAGACA AGAAACAAATTTTACAAATTTCACGGACATCTCAAAAATACCTTTAAAGG TCAATTGTTTTTGGACAAATACTGTATAACACGGCTTCTAAAACTTTCTA AAACTAAATCTAAAAGTTTTACTTTTGTAGATCGAAAAACAAAATTTATG GTGCGAGACATTTCGGTGAGTGGCACGTCTTTATTATGGAAATTTTCTTA AATACATGCCCAGAAAGAATGTTAGTCTTACAAGGGTGTTACAATTTCAT TAGAAATTTACTATACTTTAGTCACAAATTTTCGAGATATTACAAATACA AACAGTATAGGCCATTTTACAGTAAACGCAATTCGTAATGGGTGAACAAG ATTTTGCGAGAAAAAAAACGACTTCTTATTGGTCCAAGATTTCTGAGATT TTTGAGACCTACAGGAATTGGTTATAAAAACGCAATTAAGTCCTGATTAA CCATGATTCATTGCAACTGCAAAATTGCCTATCATAGGCCATTTCACATT CGTAAAGCGTAATGGGTAATTAGGACCACTGCACGCCAATGACGACTTTT TATTGGTCCAAAGTTT

Coding sequence (CDS) from alignment at scaffold_63:1200441..1206806-

>TCONS_00071795 ID=TCONS_00071795|Name=TCONS_00071795|organism=Clytia hemisphaerica|type=CDS|length=3615bp|location=Sequence derived from alignment at scaffold_63:1200441..1206806- (Clytia hemisphaerica)
GAGAGATAGATTTCCATCGAATAAGAGAGCGTATCGAATCGTTTGCCAGA
GTTTCTTGTTGAGAGATGATAATTAATGCAGTTGTTTGTGAATTAATAAC
ACGAAAACGATTCAGTAAGATCGAGTTTGCAAGAAACCATCCAGGTAAAG
CAAGACGTGGCGACGTTTGCGTGTTCTTCTCGCATAGCGGTAATACACGT
GAATGCATATTCGCGGCTTCCCACTTACGTTTACGTGGAGTACATATTTT
ATCTGTCATTGGGCATGATGATTGCAAGTTAGCTGAGAGTAGTGATGCAT
TCATTTCTTATGAATTGGAAAACGATCTTGAAGAACCAATAGGAGGCGTT
CCAACCACGAGTGTAGTTCTTCAGGTAAATCAGGCATTGTTGCTGAAAGG
ATGTCAAGATCATTATCATCTACAGGGACACCTGCTCACTATGTACACGG
TGCTGAATGGACACACGGCGATCTAGATGCCAAACATACCTGATCAGCTC
CCGTCATGCAATGGGCATTATTCACATCACATGACTAAACACGTGACATC
ACGAATAACGTCATCATCAACAGCCAATCAAAACATGGAAGAATTTATGA
TAAGCATTAGAAAAGATGCTGAAGCAGCAACGGCGCTAGCTGAACGTTTA
AAACCTGATTTGGTGAAAGGCTTTGTGGATATCATTGAAAAATGTAATGG
CTGTTTGATAACATCTGGAATAGGAGAGATAGATTTCCATCGAATAAGAG
AGCGTATCGAATCGTTTGCCAGAGTTTCTTGTTGAGAGATGATAATTAAT
GCAGTTGTTTGTGAATTAATAACACGAAAACGATTCAGTAAGATCGAGTT
TGCAAGAAACCATCCAGGTAAAGCAAGACGTGGCGACGTTTGCGTGTTCT
TCTCGCATAGCGGTAATACACGTGAATGCATATTCGCGGCTTCCCACTTA
CGTTTACGTGGAGTACATATTTTATCTGTCATTGGGCATGATGATTGCAA
GTTAGCTGAGAGTAGTGATGCATTCATTTCTTATGAATTGGAAAACGATC
TTGAAGAACCAATAGGAGGCGTTCCAACCACGAGTGTAGTTCTTCAGGTA
AATCAGGCATTGTTGCTGAAAGGATGTCAAGATCATTATCATCTACAGGG
ACACCTGCTCACTATGTACACGGTGCTGAATGGACACACGGCGATCTAGA
TGCCAAACATACCTGATCAGCTCCCGTCATGCAATGGGCATTATTCACAT
CACATGACTAAACACGTGACATCACGAATAACGTCATCATCAACAGCCAA
TCAAAACATGGAAGAATTTATGATAAGCATTAGAAAAGATGCTGAAGCAG
CAACGGCGCTAGCTGAACGTTTAAAACCTGATTTGGTGAAAGGCTTTGTG
GATATCATTGAAAAATGTAATGGCTGTTTGATAACATCTGGAATAGGAGA
GATAGATTTCCATCGAATAAGAGAGCGTATCGAATCGTTTGCCAGAGTTT
CTTGTTGAGAGATGATAATTAATGCAGTTGTTTGTGAATTAATAACACGA
AAACGATTCAGTAAGATCGAGTTTGCAAGAAACCATCCAGGTAAAGCAAG
ACGTGGCGACGTTTGCGTGTTCTTCTCGCATAGCGGTAATACACGTGAAT
GCATATTCGCGGCTTCCCACTTACGTTTACGTGGAGTACATATTTTATCT
GTCATTGGGCATGATGATTGCAAGTTAGCTGAGAGTAGTGATGCATTCAT
TTCTTATGAATTGGAAAACGATCTTGAAGAACCAATAGGAGGCGTTCCAA
CCACGAGTGTAGTTCTTCAGGTAAATCAGGCATTGTTGCTGAAAGGATGT
CAAGATCATTATCATCTACAGGGACACCTGCTCACTATGTACACGGTGCT
GAATGGACACACGGCGATCTAGATGCCAAACATACCTGATCAGCTCCCGT
CATGCAATGGGCATTATTCACATCACATGACTAAACACGTGACATCACGA
ATAACGTCATCATCAACAGCCAATCAAAACATGGAAGAATTTATGATAAG
CATTAGAAAAGATGCTGAAGCAGCAACGGCGCTAGCTGAACGTTTAAAAC
CTGATTTGGTGAAAGGCTTTGTGGATATCATTGAAAAATGTAATGGCTGT
TTGATAACATCTGGAATAGGAGAGATAGATTTCCATCGAATAAGAGAGCG
TATCGAATCGTTTGCCAGAGTTTCTTGTTGAGAGATGATAATTAATGCAG
TTGTTTGTGAATTAATAACACGAAAACGATTCAGTAAGATCGAGTTTGCA
AGAAACCATCCAGGTAAAGCAAGACGTGGCGACGTTTGCGTGTTCTTCTC
GCATAGCGGTAATACACGTGAATGCATATTCGCGGCTTCCCACTTACGTT
TACGTGGAGTACATATTTTATCTGTCATTGGGCATGATGATTGCAAGTTA
GCTGAGAGTAGTGATGCATTCATTTCTTATGAATTGGAAAACGATCTTGA
AGAACCAATAGGAGGCGTTCCAACCACGAGTGTAGTTCTTCAGGTAAATC
AGGCATTGTTGCTGAAAGGATGTCAAGATCATTATCATCTACAGGGACAC
CTGCTCACTATGTACACGGTGCTGAATGGACACACGGCGATCTAGATGCC
AAACATACCTGATCAGCTCCCGTCATGCAATGGGCATTATTCACATCACA
TGACTAAACACGTGACATCACGAATAACGTCATCATCAACAGCCAATCAA
AACATGGAAGAATTTATGATAAGCATTAGAAAAGATGCTGAAGCAGCAAC
GGCGCTAGCTGAACGTTTAAAACCTGATTTGGTGAAAGGCTTTGTGGATA
TCATTGAAAAATGTAATGGCTGTTTGATAACATCTGGAATAGGAGAGATA
GATTTCCATCGAATAAGAGAGCGTATCGAATCGTTTGCCAGAGTTTCTTG
TTGAGAGATGATAATTAATGCAGTTGTTTGTGAATTAATAACACGAAAAC
GATTCAGTAAGATCGAGTTTGCAAGAAACCATCCAGGTAAAGCAAGACGT
GGCGACGTTTGCGTGTTCTTCTCGCATAGCGGTAATACACGTGAATGCAT
ATTCGCGGCTTCCCACTTACGTTTACGTGGAGTACATATTTTATCTGTCA
TTGGGCATGATGATTGCAAGTTAGCTGAGAGTAGTGATGCATTCATTTCT
TATGAATTGGAAAACGATCTTGAAGAACCAATAGGAGGCGTTCCAACCAC
GAGTGTAGTTCTTCAGGTAAATCAGGCATTGTTGCTGAAAGGATGTCAAG
ATCATTATCATCTACAGGGACACCTGCTCACTATGTACACGGTGCTGAAT
GGACACACGGCGATCTAGATGCCAAACATACCTGATCAGCTCCCGTCATG
CAATGGGCATTATTCACATCACATGACTAAACACGTGACATCACGAATAA
CGTCATCATCAACAGCCAATCAAAACATGGAAGAATTTATGATAAGCATT
AGAAAAGATGCTGAAGCAGCAACGGCGCTAGCTGAACGTTTAAAACCTGA
TTTGGTGAAAGGCTTTGTGGATATCATTGAAAAATGTAATGGCTGTTTGA
TAACATCTGGAATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044565XLOC_044565Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071795-exon-scaffold_63-1575043694:1206245..1206806TCONS_00071795-exon-scaffold_63-1575043694:1206245..1206806Clytia hemisphaericaexon
TCONS_00071795-exon-scaffold_63-1575043694:1205708..1205809TCONS_00071795-exon-scaffold_63-1575043694:1205708..1205809Clytia hemisphaericaexon
TCONS_00071795-exon-scaffold_63-1575043694:1204356..1204585TCONS_00071795-exon-scaffold_63-1575043694:1204356..1204585Clytia hemisphaericaexon
TCONS_00071795-exon-scaffold_63-1575043694:1202251..1202332TCONS_00071795-exon-scaffold_63-1575043694:1202251..1202332Clytia hemisphaericaexon
TCONS_00071795-exon-scaffold_63-1575043694:1200441..1201716TCONS_00071795-exon-scaffold_63-1575043694:1200441..1201716Clytia hemisphaericaexon
TCONS_00071795-exon-scaffold_63-1510915933:1206245..1206806TCONS_00071795-exon-scaffold_63-1510915933:1206245..1206806Clytia hemisphaericaexon
TCONS_00071795-exon-scaffold_63-1510915933:1205708..1205809TCONS_00071795-exon-scaffold_63-1510915933:1205708..1205809Clytia hemisphaericaexon
TCONS_00071795-exon-scaffold_63-1510915933:1204356..1204585TCONS_00071795-exon-scaffold_63-1510915933:1204356..1204585Clytia hemisphaericaexon
TCONS_00071795-exon-scaffold_63-1510915933:1202251..1202332TCONS_00071795-exon-scaffold_63-1510915933:1202251..1202332Clytia hemisphaericaexon
TCONS_00071795-exon-scaffold_63-1510915933:1200441..1201716TCONS_00071795-exon-scaffold_63-1510915933:1200441..1201716Clytia hemisphaericaexon
TCONS_00071795-exon-scaffold_63-1491911889:1206245..1206806TCONS_00071795-exon-scaffold_63-1491911889:1206245..1206806Clytia hemisphaericaexon
TCONS_00071795-exon-scaffold_63-1491911889:1205708..1205809TCONS_00071795-exon-scaffold_63-1491911889:1205708..1205809Clytia hemisphaericaexon
TCONS_00071795-exon-scaffold_63-1491911889:1204356..1204585TCONS_00071795-exon-scaffold_63-1491911889:1204356..1204585Clytia hemisphaericaexon
TCONS_00071795-exon-scaffold_63-1491911889:1202251..1202332TCONS_00071795-exon-scaffold_63-1491911889:1202251..1202332Clytia hemisphaericaexon
TCONS_00071795-exon-scaffold_63-1491911889:1200441..1201716TCONS_00071795-exon-scaffold_63-1491911889:1200441..1201716Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071795-proteinTCONS_00071795-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_63supercontigscaffold_63:1200441..1206806 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.0146617 0 0 0.110333 0 2.06232 2.13203 6.4617 3.03034 7.44876 3.193 0.427673 0.446984 0.14427 0 8.82414e-09 0.948833 1.17188 2.16566 2.09362 2.82123 0.299345 1.16503 0.315669 0.972965 0 0 0 0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001347SIS
Vocabulary: Biological Process
TermDefinition
GO:1901135carbohydrate derivative metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0097367carbohydrate derivative binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:1901135 carbohydrate derivative metabolic process
molecular_function GO:0097367 carbohydrate derivative binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00071795 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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