TCONS_00071765 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071765
Unique NameTCONS_00071765
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4468

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071765 ID=TCONS_00071765|Name=TCONS_00071765|organism=Clytia hemisphaerica|type=transcript|length=4468bp
GCGAGAGAGTGAAGAGTGAAATTCgtagagtttttttgaaaattttgaaa
atggaaatttatttctttgcttgctactttatatttttgcttACCACAGT
TCATGGTCATTCAAAGCTCGGATCATTGGTCCCCAAAATCAACGACATAA
CATTAACAGGATGTCAAACAAATCTCCAAAAGTCCATCCCCTTTCCATCA
ACTATCCATGGTCAACCTaccaaagatttgaaaatctcAACAGAAATCAT
CGAATCCTTAGATGTGAAACCATGCGGTAGAGAGACGTATAATCAAGTTC
GAAATTATGAGGAATGTGGCCTGGAAACGAATCTAGCTTTGTTACCAGTC
TTCAAAATGGGAGAAGATCATCATGTGAAGCATATACAGAAGAAAGTCAC
ACCACGAGgaagTCTTGATTATGTGTTTGACGGTGGCACAGCAAGTCGAT
ATCCTGCTAAAGATCTTCCCAAAACATGGTATTCATCTTACTCCGTATCT
GGTTGGATTCAAGTGCAAAATCACCGGGACCGACAATATGTTGTTTCATG
GTCTAAAGGTGATACTGAACACAGGCAGAATATGGGATTCTACGTGAGAA
GatcACACAATGTTTTATCCTTTGGCTTTTCACAAACGTTCAAAGAGAAT
GGATTTTCATGCCTGGTGAAACGAAAATGGAAGGTTCATGAGAAAGAACT
GAAATGGCATTTCTTTACTTTATCTTTCGCCAACTGTGACGTTCAGTTTA
CTTTGGATGGCACCAAACACCCGCCGACATCCTCTAAATCACATCTACAT
GCACCAGATCGCCATATCCAACCTAAATTCGTCATCGGTGCTCGATGGGT
TGGTAACAGCATCAAATATGATGATTATTTCCATGGTCAAATCAGTGGAC
TCATCTTAAGCACCAACACCAAACTCGATTCTGAGaaactgGATTGTTTA
TTCCGATGCAAAGAACAAGCTTCAGCCAGTCTCAAAacaatatcaaaaca
aattacaAGTAAAACCCAACCAAAGACATTTGAACATAACCAACCAAAGA
CATTCGAACATAACCAACTCTTAGTCTTCAACTATACCAatagaaacatt
tttccaattcAAAACACATGTAGAATAAAAATCACATTCTCACAACCAAG
AGCTGAAACCACTACATCCTCAAATTTTCACCACAAATTCTCTATACAAA
CATCTAGAGAGCAGCCATCTTTAACAATCACTGGTTGCCAAGACAACCAA
GGAATGCGTATCTGCGCAGATGCTGAAATCATATCTAAAGGATGCTTAAA
AACTGTAGATTCTCTTACTATAATATCCAATGAACTTTTAGAGAAACATG
AAAAATTGACAATTCCAACAGCATATATTCATAGATATAAGTTAACTTTG
AAGACGATTGACAAAGGATTGATCGTTTATGGTGTTGCCAGTATTGAAGA
TTACACTcacattttgaaacaaattaaattggtgaATCCATCTTCGACTA
TTGCCAGTAATATGAACGATATCACGAAGAGATCTTTCAAGATCACAGTT
TCGTCATACAATGGTCTAATCCAATCAAAACCATTATCCATTCACATGTT
ATCTGGTGGCGCCATGGTTGCACCACAACCAACAACAACTACTCACAAGC
CACCTGTCAAAAGCAACCACAATCATTATTATATTTTCGGACACCTTTTC
ATGCCGGATAACGTATTACCGGACACAGGAGCTGGGAAGGAAGTTTATCA
GAAGAAATCATCAGATAATTCTGGTTCTATTTTACTTGTTGTGATTGGAA
GTATTTTTAGTATCATGTTTCTTGGATCAGCAATCATATTCACAAAGAAT
CGATTCTCGAAAAGCACGGCAGCTACCAACAATTACAACACTTTCACAGC
TGCAATGAAACCTTCCCTATCCACTACTACTAAATCATCACATCTGAACG
AGGCCAGTATTTCTGCTGTGTACTTTATGGACGACAATATGACACCTTCA
ATAAGAATTAATTCTTCGGATCGTGTTTCCATCAGTAATGACCCACTCAA
GGAGATACTCTTGAAGAAAGCAGGTGCACCAATAGGCGTTTCAATGGATG
GTTCATCGATATACAGTGATGAAGAAGAATCGGATTTTGATAATGATTCT
ATTCGACAATTAGAATGGGATTGTTTGGAAAGGAATTTATCCAATGTTTT
AAATGGTGGAGGTGATGATCGATCTTCAACCACTGGTAGCAAACTTGATA
AAGATGAAGCTTTCTATTTGTGAGTCTTCCACAATctgattgggcttttc
caaaaaaaagcagtataccccctgttgaggaagTCCATTTCCGTTCAAAG
GGGGgttaaggtttgatatgtggcggaattccatagggagatacaaaatc
tgtcaaaaataactgctttttaaatcctactaaaattcaaaattccaaAG
GGgcttaaacctgaaattgcctggaattccagggagttacagcatttcca
gccatagagagatggacctcctcaaaagggggaaaatggtttttttctgg
aaaagcccattatatTCCGAGCTGATATTCAACGTCAAATGAAGTTCACC
TAACGCCCATAACGTCGGTTTAACGTTAGGTCAACGTTGGAACGATATTG
TTTACCAGCTTGAATGGAAGTTGGCTTGGTTCGAGTTTCAAGGTTTGAGT
GATGTGGNgggcccccccccccgtctattcgggagacaagagtatagTGT
TGTACAGAGGAGGCAACTACCCCCAACCATTTGACACCGAATATTAACAG
ACTTTTTGTGCTTGCTTCGCTCGTATTATAGGGCGTTAAAAAGCGCCAAA
ATTCTTAGAATCGAATTTAATTACCTCCCCAGTGAGCTTGCCCAAATTTA
GATCAACCCATCACCTCTTGGTACTGGTATACTCGAACTCAAACTCCTAG
TGACGTCAGAATAACTGTACTTTTTGTGGGGGCTCTTTTGAATACATTAG
TTTGGTTGATTATATGGTGGTTCTCAGACATTTGCGTTGCCGTTGGTTAA
TATATAGTAAGAAGAGTCTATTTCAGTTAACTTAGTTTTGCTTCAGATGG
AAAATTCTCTATTGAAAGCCGATGGAAATATCATCAAGTTAGACCAGTTA
GCTTTGTTTTGAACTTTAGTATAATTTAGTACAGTTAAGTTAAGTTGAGA
TTGTTTATTGCCCAAGCGTtcctactactactactactactactgaAAAA
GCAGGAATGAGTGGGACCTGTTCCCCGATGGGGAGGGCTCATCATTGTCA
TAGCATCATATAATCATCATATTGAATTCAAAAGGGTTCCAAATAACAGT
AGCGTATACAgaaggggcgcaaaatttgcgtaggagagcagatttttatg
acactgtaattatctattcataatataaaaatagaattattgtgtcataa
aaatctgctctcctacacaaattttgcgcccccttGCCTACGCTCCTGAA
ATAATGGGTAAGAAAATTCCACAATAGGAAAATTGTCCTGAAAATTCCTC
CAATAGGAAAGGAGGAAGCTCTAAACAACGATAATTCTCTTTGGGTTTCT
GAGCTTGATTTATTCAATCTCCTTTGGTGGCGAGTTCACTCATTTTATGC
CCACTTACTATAACTTTTTGCACTCCGTCAGTGGGAAAGTAGGCTACTTG
CATCCACTagaacggattcgtgctccttataatACCTGCtgttttgtaga
ggtctacgATTCAGACTAGTGGGAAAGGTCGCGtgaaaatttcagtgaaa
atacaattcgccaaattagcatttcaaatttttttttactgttaTATACA
TTTTACAGCTTTTTTATGAGAgcttttttattataaatttttattttttt
cggcTTTCTTTCactagtttaggtataaacttatttcttttctacatagt
ttatacctaaactattCTTTCActctctttatttttttcttctcaactgt
acaaatttttgctgactttCCCAATTGGAAATCTTTAAATCTTTTTGGTG
ATAAGTAACCACACCATAGGGATTTCGTTACTCGCTGTTTTGTGAGGCCA
TTATTAACTCTAATAGctttaaaataattcaattCCCAAAAAAATCTCAT
AATGTTTCCATTAACGGTAGTTCTCTAACCCATATCTCCTTTTGTTTGGT
ATAATTATCATGACAACCAAGATTTCCTTTTGGGAATTAAAGACAACGAA
tgtatttacattttttatttattttatctaatgtttataaaaaattgtaa
atataatTTCTTCAGAAAGTTTAGTATTTCCAAGGACCCCGAAAAAGCAA
AATATTAAAATTGTACAAAAGTATTTTAAGTAAATATGATTTGTATATAT
AATTCAAACTTATGTATCTAATactttttcctcatttttgtttttgtaaa
aatatgtaAGAATTTAGC
Run BLAST on NCBI

transcript from alignment at scaffold_63:922541..940800-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071765 ID=TCONS_00071765|Name=TCONS_00071765|organism=Clytia hemisphaerica|type=transcript|length=18260bp|location=Sequence derived from alignment at scaffold_63:922541..940800- (Clytia hemisphaerica)
GCGAGAGAGTGAAGAGTGAAATTCGTAGAGTTTTTTTGAAAATTTTGAAA
ATGGAAATTTATTTCTTTGCTTGCTACTTTATATTTTTGCTTACCACAGG
TACCTAATTTAGTTTTTAGAGCATTACAGTGTAAAAATCAATTTGAATAA
TTTTGGTGCAGTCAGGTGTTTCTCAAAGGCTAAAAGCCAGATCACTCAAT
GAAAATGCAGTACTTGAATTTAGGTCCATATGAGTAATTTTGTATGGCCT
TCAAAACTCTTCTTAGTTTGAATGTGTGAATGAACTCTACTAGGAATCTT
TTGATTTTATTAGGCCTTTTCTACCAATATTAGAATGAAAACTTACAATT
TCACAACAAATGACCTTTATGACCAGAGGACATTCATTTGTTCAGATCTT
TATAATATTCCATAGATTTATGGGAGATTTTATCAACTAACGATTTTATT
TTATCAATCTTATTTTTCAGTTCATGGTCATTCAAAGCTCGGATCATTGG
TCCCCAAAATCAACGACATAACATTAACAGGATGTCAAACAAATCTCCAA
AAGTCCATCCCCTTTCCATCAACTATCCATGGTCAACCTACCAAAGATTT
GAAAATCTCAACAGAAATCATCGAATCCTTAGATGTGAAACCATGCGGTA
GAGAGACGTATAATCAAGTTCGAAATTATGAGGAATGTGGCCTGGAAACG
AATCTAGCTTTGTTACCAGTCTTCAAAATGGGAGAAGATCATCATGTGAA
GCATATACAGAAGAAAGTCACACCACGAGGTTAGTCTCGTTATTTTTTGA
AGAATTATTTGCAGGATTGCTCGAATGAAAATATTTATAATGCTGATGAG
GTTTAACCGTTAGGTTGGGGGGATAAGAATTCATAAAAATGTCTCACTAA
CGTTAACCTCCTATCAAAAGGGCCTCTCATTCATATATAACTAGGAAAAT
TTTCGTCTCATTGCGAATTATTTTTCCGTCATTATAGTACATAGTACTGT
GTATGGTTTTGAGGTTTACGGTAACTTCTCATATGTTTTATCGATATAAG
TGGTTTAAAGTTAGTGACAAAGCTTAATAATTTCAAGCTTAGTCTGTTTA
AAAAAAAACATTAATGTTTGAGAAAATTTAGTTATATCAATGTTGGTTTT
CTAATGATTTGTCATAAAAAATTTACGTGATTTCACAAAAAACTATTTTT
CTTTCTCGCAAGATTATTATCAGTTTTTAAGTTTAATACGTTGATTTATA
ACTTAGAGTCTATTGAAAGATTTATATTCAATATTGGTCAGTTTTGTGGT
AAGGCATATCCCCTTGTCACACGCACGATGTTCTTAAACCTTACGTAAGC
TACCTTATTGAGGAAAAAATGTCAAAGTTTTATTTAGTCGGGTTTTTTTT
TCGTTGGGGAAAAATTTCGTCACCTAGAGGCATTTTCTTCACTTTCCCCC
GACGAAATTTACAATTTAGTCACTTTCATTCACCCAATTAAATTGTCCAA
ATGAAATGGTTTCCTTCACTAGCTTGAAAATAGATCTTGTAATTCAACGT
TTAAAGCACTAATTTCGGTTAATAAAGGTGTAAAAAATTTAGATTTTAAT
TTTGGATGGGGTTTAAAAAATTGGGTAAAAGTTTTGGTTTGGGATAAAAA
AATCGGGTAAAAGTTTTGGTCGAATGATAAAACATCGGGGAAAAATTCGT
CGGGGGAAAATTTCGTCACCCCCTCAAAACTTTCGTCTCTTTCCCCCGAA
ATTTTTTTCCCCGATAAGGTATAAAAATAAAATAAAGTAAATCACACACA
TACACCTGTAGGAGGGTCCATTTTTTGACTAACTTTGTTCAAAATCAAAA
TGCATTCCTTTTAAGTGCGTAAACTCTTTACTGTCACATAGAAACCATGC
CGGCATAAATTAGATTATTTTCCTTGAGAGTGGTTTCTATATGGTAACAA
AAAAGAGTGAACAATTAAAGCGAATAGACTATAGTTAAACTTCTCATTTT
TCAACACAGTCCGATGATTAACTTACACATCAGGAGGATGAAAATCGTGG
CTAGGAAAATAATTTACCCGATAGATTTCCAGTCACGGAAAATTCCTTCA
ACTTTCCTCAACATCCACAATACTTTAAAAGTACAAGTTACAGCCTCTAG
AAGGAGGCTCGTTGGAGTTTACAAGCCCTGTTGCTATTTTTTGTTCACTC
CAACGGGCAACCTTCCAAGACCTATAACTTTATATGCAATAATATGCTAT
GTGAAAAATCATCGTATATCTGAAATCATAGGAGTCTGCAAAGTACCTCT
GTATCAAAAAGGCAAAACAAAAGCTTCTCTTTTTGACGTAAAAAAGTGAC
GTCAAACCCCCGGATTTCAACGCATGACACAAAACGCAACGTCGATTCTG
CGCCATGTTATAAGCAGCACCTTATATTCAACGCTTTTTTTATTTTCAGG
AAGTCTTGATTATGTGTTTGACGGTGGCACAGCAAGTCGATATCCTGCTA
AAGATCTTCCCAAAACATGGTATTCATCTTACTCCGTATCTGGTTGGATT
CAAGTGCAAAATCACCGGGACCGACAATATGTTGTTTCATGGTCTAAAGG
TGATACTGAACACAGGCAGAATATGGGATTCTACGTGAGAAGGTATGTCG
CCAGGATTTGTTAACATTTATAGAAATTTTCTTCCGGCACGCTAAAGCTA
TGAATATTTGCAGAATTTTCAAGGAATCGGTCAATCTCAAGGCCGTTGTG
TTTTGTTGCATTTGTCTACGTCTACATTTGTAGAAAGTATTTTTTCCGGT
AGGGCCGGGAAAAAACAGCGGAAAGATTGCATAAATGCGCTTGGAATGTT
TCCCCGGAAAATTTTAGTCATCCTACGTATTAAACATAGTCTGGTAGTTG
GCGTGTCTCCCTAAACCAACTTATAACTGTAGTCTCGGATTAAACGAATT
TTTTTTAACATTACGTATATTGACCTGGTCGGAAAGAAACCTTTTTATAA
TGCTCGCATAGTGAATAAGGATAAAGTTGTCAATAACATTGGTTTGAGCT
ACATAGCAACTGAGCAGGGTGTGACAATAAAGATCTTTTAAAGGTAGATT
ACAGCTAAACTTTTGGATTTTTGTTTCCTAACCAAAAATCAAGGATAAAA
TCTCCTTGTTTTGAAATATGTGTATAAAAATATTCGTCCCTATTTTGTAA
ACTAGAGGCTTGGAAAATTATGAAATAAGAGTTCTTGTTTTGTGAAAATA
TTGATGCAATTGATAAGGATTCAGATTCGATTCTTATATGACGAAAAAAC
TTTTCAAAGTCACGTTTTAACCTTTCTTTCGCGCCTCATTGATATAGGCG
TGTTTGGAAAATTATGAAATAAGAGTTCTTGTTTTGTGAAAATATTGATG
CCATTGATAAGGATTCAGATTCGATTCTTATATGACGAAAAAACTTTTCA
AAGTCACGTTTTAACCTTTCTTTCGCGCCTCATTGATATAGGCGTGGTAG
AATAAAGGAGTGAAAGTACCTCTACACTACCCTAGTTAACTAAGCTCGTA
TTCACAAGGCTAGGCCGCACGGCTAATGACAATATAGCGTTTTCGGCGCT
TTAAAGATTTTTTATATATTTACGGATTTTAAGTTATTCAGCCACAACTT
ACCATCAGATTTATCCTAGTGGCTGAATCAAACTAGCTTAGATTTCTAAG
CTACCTCTGCACTAAATTATGGACAATTTCGAAGTCACGTGCCCACGTCA
CTTTTGCAGGACTTTAATCCGGTCCATTTGTACCTACACCTGCCTACACA
ACAACCTATTCGCGGCAATTCTTTTAGAAATTGTTTTAATGATGTTCCTC
TTCAGTGGGAGTTTCCCCCTCTTCATTTGTCCTTACTTCTTTCCTGGTTT
TGATTTTTCATTATGTCTTGTATGAATTTGAATAGTTTTGTGTCCTTGGC
AGGAGCAAGAAATGAGGAAAGTCTGGTATAATTTTATTATTATTATTATT
GTTATCTCTTTTTATTTTCTAGATCACACAATGTTTTATCCTTTGGCTTT
TCACAAACGTTCAAAGAGAATGGATTTTCATGCCTGGTGAAACGAAAATG
GAAGGTTCATGAGAAAGAACTGAAATGGCATTTCTTTACTTTATCTTTCG
CCAACTGTGACGTTCAGGTAGGATAATTTTCTGTGATAATCGTGTGAATA
CCCCTCGTATATTTTGTTATTGGACCTACCCCGGTGGAGGTCCTATAAAT
TAACCTTTGTCCGTCCGTCCGTTAGTTACCAGCTTTTCTCGAGATTGGCT
CATTAGTTTTTTCTGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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GGGGTACTTGGGCAAAAAAAGGTAGGGGGTACCTTCAGCGGCACAACCCG
TCGATCGGCAAGGGTAGTACCCCTGGGCTGTAGGACCATGAAAACCCGAA
AAGCTTGAAAATGTATACTGCAATAAAGATTCCTTCTTAAAGCTCTAAAG
TTGTCGATAGATTAATTATGCCCAGTATCGTCCTAAGATTTTAATGCCAA
CCTAAAGTGGTACATTGACTAATTGCTGAAATATTTTCAGCTCGTTTTAT
TTTAAGAGTGCAATTTTGCATTAATTTAAAAGTCATTAGAAATTGGTATA
CGTGGTTAGTTAGTGGGTTACAAAAAAAATGATCTATTTCTTTTCTTACG
AAAGTCGTTAATTTTGTAGTTATTGTGTACAATTTAATTCATTAGGCAAA
TACTTTCCTACATTACAAATCCATGTATCCCTTCTGACGTCCTCGGAGTA
TCTTTACAAAGATAAGATATATAAACATGGTCCTACTTTAGGCTTCTTTT
TCAACGAAAAAAAAACAAGTTTAAACACACCCAATCCATTTCTTTTAGCA
AAAAAAAAAAGTTGTCCAGGGGGAGCAGTCTGTAGGGGGGGGTTCACGGT
TGGCGGAGGAGTGGAATCGACCTTTTTTCGAGCGGAGTGGCAGAATTCGA
TGGAACTTTCCACGGAATTTCGGAAATTGAATCCTCTGTCGGAGAGTGGA
AATTGGCACAATTTCGAAACGATAAAAAACGGAATTCAGCAAAAGAATTT
CATTCTATTTTTGACGAAAATTGGTAATAATATATAACCCTTGAAACCCC
GACCTCTGTAGGACCGTGCTGGATGGAGATGTTTATATTTTGAAAAATCT
TGTCTTGTATCGGTCTGAATTCGCGAATAAGTGTTTAGATTTGTCCAGAT
AATTTATGATTTCTTTATTTTTATCTCCAGTTTACTTTGGATGGCACCAA
ACACCCGCCGACATCCTCTAAATCACATCTACATGCACCAGATCGCCATA
TCCAACCTAAATTCGTCATCGGTGCTCGATGGGTTGGTAACAGCATCAAA
TATGATGATTATTTCCATGGTCAAATCAGTGGACTCATCTTAAGCACCAA
CACCAAACTCGATTCTGAGGTATGTAGGGAAAAACAAGACTATTATTAGT
ATTTCCCAGTAAATTCGTTTTGCCGGTGAATGACAACTTAACTATGTCGA
ATTCTGAATTCTAGGCTGGCGATTTCTTAACAAATCTATTCCCATTAATG
AGTCGTTGGGCCAGCAAGTGCAATATTTAGACCAGTGAATGGTTATTTTT
TATATCTTTTTTTGTAACTTGGGAATTTCGTGTTCGCTAGGCTAAAATGA
GAATTTTTCATGTTGTTTTATGATGTGTTGATATAGTTTTTAGATGGTTA
TAGTCCTTTATGTCTAAGTATCTTGGATGATTTGTTTCATTTTTTTTCAG
AAACTGGATTGTTTATTCCGATGCAAAGAACAAGCTTCAGCCAGTCTCAA
AACAATATCAAAACAAATTACAAGTAAAACCCAACCAAAGACATTTGAAC
ATAACCAACCAAAGACATTCGAACATAACCAACTCTTAGTCTTCAACTAT
ACCAATAGAAACATTTTTCCAATTCAAAACACATGTAGAATAAAAATCAC
ATTCTCACAACCAAGAGCTGAAACCACTACATCCTCAAATTTTCACCACA
AATTCTCTATACAAACATCTAGAGAGCAGCCATCTTTAACAATCACTGGT
TGCCAAGACAACCAAGGAATGCGTATCTGCGCAGATGCTGAAATCATATC
TAAAGGATGCTTAAAAACTGTAGATTCTCTTACTATAATATCCAATGAAC
TTTTAGAGAAACATGAAAAATTGACAATTCCAACAGCATATATTCATAGA
TATAAGTTAACTTTGAAGACGATTGACAAAGGATTGATCGTTTATGGTGT
TGCCAGTATTGAAGATTACACTCACATTTTGAAACAAATTAAATTGGTGA
ATCCATCTTCGACTATTGCCAGTAATATGAACGATATCACGAAGAGATCT
TTCAAGGTATGTTTAACAAAGAAAATATTTTGTCATTAACCTTGGAACCA
AGTTAATACATCATTGAATACAATCCCAGCTGGCACACAACGTTGTTTCA
ACGTCAATTTAATGTTCACAACGTCCATTTAACGTTAGATGAACGTTGAA
ACAACACGTTGAAACAACGTTGCGTGTCAGCTGGGATACTTCTATACACG
TTTTTTTTTTTTTTAAGAAACTAGTTTTCCCAAGCAGCCTCAATGTTTCT
TAAGAAATCGGCCTTTTGAGCCTTAAATGTTTCTTACATGTTTCTAAACT
TTGTCAAGCTTAAAGGACGCATGTCGATAATACAATAGTCTAATTGACTA
ATATACGGTACTTTCCTATCTTCTATATTGATTTTCTGACTTTCTCAAGT
GTTTCTAACTGTTATGTATGTATATTTCTGGAACCTTGATTGGAGGGTTC
TTAAAAAAACGCATTAAACTAGTGTATATGTATAAAAGTTGCGAAGCGAT
CGAGGCGGATCACTCAATTCGCAAGTTGCAAGCAAAAAGATAGAAAGTAT
TGAATGAGCCCGAAAAGTTCTTTTTTCTAACGTTATAGGGGTCTCACCAA
ACAAAAATGATTTCTCATTACATGAATAAATATGGAATTTAACGGCCTTG
AAATTATTAACACGAAAATTCTCAATTCGTGTTAATTACACCTCAATACT
CATGCAAGAAGGTAATAATCGAAGATAATTTTAAAATCGCGTCTTTTGTT
CGGGAAAGTTTTTCCACCTAAACCTTAAAAGTAAATTACTTTTTATTTTG
GTTTTTATTTTGACTCATTTTACTTCCGGTTTTAAATTCCTCGTGTTCGA
AAATCGAACTTTCGAATCTTTCGAATTTCGAATGTTTCAANNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGCTC
TGGTTTTCCGAACCAATCAGCTTTCTGATATGGAGCGGGAGTAAAGAAGC
TAAAAATGTACGGGAACGACGGAATATCTTTTATGGAAGTTGCCCTGACT
CAGAGATTTTCGGCGCCGTGGAGTGGTTCTTTTTCTCGACGAAGCCATCC
TAAATACAATCTACCAAACCGATATTGTAACGCCTCTTACCTGGACAAAA
ACAACCGGGATCTGAATACTTAATCCATATTTAACAGATGGGAACTAAAT
TTTCGTTTTCGTCTTGCGCTCCCCTGGGTATATAGAACTTAAAGGTACAT
GCACACTATAGCAAAACTGCTTCGCTCATGTATATTCGCTTCGCAAAAAT
GCTATTTTCTCATTCTCAGCCTCAGCATGTTTCTTAGATGTTTCTTAGTT
TTTAGGTATTCTGAGCCTCATGTTTCTTAAAAGTGTGTTTCTTAAAAAAA
AAAACGTGTAACGCGAATCTTCCGAGCCTCTCATTCTTTTCAGCTCGTTA
ACCCTTAAAAGCGACTCTCCATAATTGGCCCAGCTAGCTTTAGCGTACTG
GGCCTTTCATTAGCATTCTGCCCGGTGTCAGTGTGTAACAATTTACTAGG
CGATACGCGTTTTCATATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAGTTGTT
TTTACATTTCTCTATCATGTGAACAGTTCAGTTGTTCACGTGTTAGGAAA
AAAACATCTCTGTATATAAGATTTAAATATTATGAATTATTACATAATGT
TGTAAATAAGAGATAGCCGAATGGTCTAAGGCGTCTATGGTTTGTATTAG
CGACTCCAGGTTCAAATCCCCTCTGCTACTCAAGTCTTGTTCAATTCATA
CTTTTATTCGCTGGGCCTTCATGCCCTCTGGGCTTCTTGTTTGAATATAG
TCGCGTTCCTTGCTCGAGTCAGAGAGGAGGATAGACCCGAATACAATTTG
AAGATTTCTGAAACTTAAAATACAGGAGTGAGCTAGATGAGCTGGAGTTT
TTATAAGATGCTTTATTCATTGGTTATTTGAAATAATAGAAATGATGCGT
TCTTTAGAAAAAGTAATAAAATCCTTTGACTAAAAATTCAACGACCAACC
GAATCATCGAAAACCTTATAAAAACTCCACCCTGACCCCAAAATACATAG
AACCTGCGTTAATTGCGTTGAGTCCAACATTTTTTACTTGAGTAACTAAT
TGAATAACCAATTCCTCTATTATTATTCTTAACAGATCACAGTTTCGTCA
TACAATGGTCTAATCCAATCAAAACCATTATCCATTCACATGTTATCTGG
TGGCGCCATGGTTGCACCACAACCAACAACAACTACTCACAAGCCACCTG
TCAAAAGCAACCACAATCATTATTATATTTTCGGACACCTTTTCATGCCG
GATAACGTATTACCGGACACAGGAGCTGGGAAGGAAGTTTATCAGAAGAA
ATCATCAGATAATTCTGGTTCTATTTTACTTGTTGTGATTGGAAGTATTT
TTAGTATCATGTTTCTTGGATCAGCAATCATATTCACAAAGAATCGATTC
TCGAAAAGGTACTTTTTTGATATCGGTTTTTTTTCTTGTCATTTTGTAAA
TTTTTTCAAGTTTTTTTCGCGTTGGTGCAATGCAATATGCTCTATCGTCT
ATCCCACCAACACAAGAAAAAAAGTGTGTGTCCTATTGTTTCTTTTTTTG
TTTCATGGGACAAAAAGTGAGAGAAATACCCAAAAGACACGCTGATTTTG
TCCCTGGGACAAAAGTCAGATTTCACTTTTATTGGTAGAAAGAAAAATGG
GTTGGAAACACGAGAAAGCGTTTCAGGTTGGTGGGATGGAGCATGTTGCA
TTGCACCACCGCGAAAAAAAACTTCTCGTGTCCCCAAGCCTTAATCTATA
AAAATCTTGCAGCAGATTATTGATTTCATCACTAATTGGTATGGTATTGA
AAGAATTTTTTGGAAAATGTTTTGTCTTTCAATAAAGGCGAATGTTTATT
TTTGCACTCAATAGATTATTTACATACTAAAGGAACGACAGTAATGTTGA
AAAACACCTTACATGTATTGACAAACTTAAGGCCTTATACTTTGGAGGAT
TTTAAGAAGCCTAAGAAACTTTGAAATGAATACTTTAGGCGTAGTACAAA
CTTTCGCGAGGTCGAAAATTCGAGAAATCTACGTCATTTACTTTCGCGAA
TTTTACAAAAAAAATTTTTATATAGATATAGTATATCCACCTCCTTCTTA
ATTCATAGCACGGCAGCTACCAACAATTACAACACTTTCACAGCTGCAAT
GAAACCTTCCCTATCCACTACTACTAAATCATCACATCTGAACGAGGCCA
GTATTTCTGCTGTGTACTTTATGGACGACAATATGACACCTTCAATAAGA
ATTAATTCTTCGGATCGTGTTTCCATCAGTAATGACCCACTCAAGGAGAT
ACTCTTGAAGAAAGCAGGTAATGATGATAGATCAATATACAGTGGCTATT
TCTAACTTCTGCTATTTCAATTTATTTCTAGTGGCCGTCAAGAAGAAACA
AACTCTTATGTGATTAATTGTAGGGGGGTCATTTTGCAATTAAATTTTTA
AATCCCCCTATATCACTTTATAATGACCCCCCCCCCATTTCAAGACCTTT
TTGCTATGAAATGCCAAAATTTGCCCAAATTCTTCATTTCCCTAGGGATT
TTTAGCAAAATCAGGTCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNCAGCTACCAACAATTACAACACTTTCACAGCTGCAATGAAACCTTCCC
TATCCACTACTACTAAATCATCACATCTGAACGAGGCCAGTATTTCTGCT
GTGTACTTTATGGACGACAATATGACACCTTCAATAAGAATTAATTCTTC
GGATCGTGTTTCCATCAGTAATGACCCACTCAAGGAGATACTCTTGAAGA
AAGCAGGTAATGATGATAGATCAATATACAGTGGCTATTTCTAACTTCTG
CTATTTCAATTTATTTCTAGTGGCCGTCAAGAAGAAACAAACTCTTATGT
GATTAATTGTAGGGGGGTCATTTTGCAATTAAATTTTTAAATCCCCCTAT
ATCACTTTATAATGACCCCCCCCCCATTTCAAGACCTTTTTGCTATGAAA
TGCCAAAATTTGCCCAAATTCTTCATTTCCCTAGGGATTTTTAGCAAAAT
CAGGTCAATAGCACCTAATTATGACCCCCCATTTTGTTGATATTTATCTG
GACTACCCACCCAATGCTTATCCCTCCCCACAATTAAGCACGCAAGAGTA
CATTCGAAACCCTCTATAATTCGAAGAAATTAGATTTCCTTTCCTGTTTG
AGTTTGAATTTTACCCGAATTCGCGCTCCATTCCAAGGACGACCTCCAAC
AATGTAGGATGTTGAAAAGCCTTGTGGAATTTCATTAAAATGGGTTTGAG
TGCAGAAAGAGTGTGGGAAGTCTGTTTCTGGCTAGAACTAGTTTATTATT
AAATGATCACGGGCGATCATGTGAAACTGCATATTAAATTTAGGCTCGTT
TACTATCTCTCTCAGGTGCACCAATAGGCGTTTCAATGGATGGTTCATCG
ATATACAGTGATGAAGAAGAATCGGATTTTGATAATGATTCTATTCGACA
ATTAGAATGGGATTGTTTGGAAAGGAATTTATCCAATGTTTTAAATGGTG
GAGGTGATGATCGATCTTCAACCACTGGTAGCAAACTTGATAAAGATGAA
GCTTTCTATTTGTGAGTCTTCCACAATCTGATTGGGCTTTTCCAAAAAAA
AGCAGTATACCCCCTGTTGAGGAAGTCCATTTCCGTTCAAAGGGGGGTTA
AGGTTTGATATGTGGCGGAATTCCATAGGGAGATACAAAATCTGTCAAAA
ATAACTGCTTTTTAAATCCTACTAAAATTCAAAATTCCAAAGGGGCTTAA
ACCTGAAATTGCCTGGAATTCCAGGGAGTTACAGCATTTCCAGCCATAGA
GAGATGGACCTCCTCAAAAGGGGGAAAATGGTTTTTTTCTGGAAAAGCCC
ATTATATTCCGAGCTGATATTCAACGTCAAATGAAGTTCACCTAACGCCC
ATAACGTCGGTTTAACGTTAGGTCAACGTTGGAACGATATTGTTTACCAG
CTTGAATGGAAGTTGGCTTGGTTCGAGTTTCAAGGTTTGAGTGATGTGGN
GGGCCCCCCCCCCCGTCTATTCGGGAGACAAGAGTATAGTGTTGTACAGA
GGAGGCAACTACCCCCAACCATTTGACACCGAATATTAACAGACTTTTTG
TGCTTGCTTCGCTCGTATTATAGGGCGTTAAAAAGCGCCAAAATTCTTAG
AATCGAATTTAATTACCTCCCCAGTGAGCTTGCCCAAATTTAGATCAACC
CATCACCTCTTGGTACTGGTATACTCGAACTCAAACTCCTAGTGACGTCA
GAATAACTGTACTTTTTGTGGGGGCTCTTTTGAATACATTAGTTTGGTTG
ATTATATGGTGGTTCTCAGACATTTGCGTTGCCGTTGGTTAATATATAGT
AAGAAGAGTCTATTTCAGTTAACTTAGTTTTGCTTCAGATGGAAAATTCT
CTATTGAAAGCCGATGGAAATATCATCAAGTTAGACCAGTTAGCTTTGTT
TTGAACTTTAGTATAATTTAGTACAGTTAAGTTAAGTTGAGATTGTTTAT
TGCCCAAGCGTTCCTACTACTACTACTACTACTACTGAAAAAGCAGGAAT
GAGTGGGACCTGTTCCCCGATGGGGAGGGCTCATCATTGTCATAGCATCA
TATAATCATCATATTGAATTCAAAAGGGTTCCAAATAACAGTAGCGTATA
CAGAAGGGGCGCAAAATTTGCGTAGGAGAGCAGATTTTTATGACACTGTA
ATTATCTATTCATAATATAAAAATAGAATTATTGTGTCATAAAAATCTGC
TCTCCTACACAAATTTTGCGCCCCCTTGCCTACGCTCCTGAAATAATGGG
TAAGAAAATTCCACAATAGGAAAATTGTCCTGAAAATTCCTCCAATAGGA
AAGGAGGAAGCTCTAAACAACGATAATTCTCTTTGGGTTTCTGAGCTTGA
TTTATTCAATCTCCTTTGGTGGCGAGTTCACTCATTTTATGCCCACTTAC
TATAACTTTTTGCACTCCGTCAGTGGGAAAGTAGGCTACTTGCATCCACT
AGAACGGATTCGTGCTCCTTATAATACCTGCTGTTTTGTAGAGGTCTACG
ATTCAGACTAGTGGGAAAGGTCGCGTGAAAATTTCAGTGAAAATACAATT
CGCCAAATTAGCATTTCAAATTTTTTTTTACTGTTATATACATTTTACAG
CTTTTTTATGAGAGCTTTTTTATTATAAATTTTTATTTTTTTCGGCTTTC
TTTCACTAGTTTAGGTATAAACTTATTTCTTTTCTACATAGTTTATACCT
AAACTATTCTTTCACTCTCTTTATTTTTTTCTTCTCAACTGTACAAATTT
TTGCTGACTTTCCCAATTGGAAATCTTTAAATCTTTTTGGTGATAAGTAA
CCACACCATAGGGATTTCGTTACTCGCTGTTTTGTGAGGCCATTATTAAC
TCTAATAGCTTTAAAATAATTCAATTCCCAAAAAAATCTCATAATGTTTC
CATTAACGGTAGTTCTCTAACCCATATCTCCTTTTGTTTGGTATAATTAT
CATGACAACCAAGATTTCCTTTTGGGAATTAAAGACAACGAATGTATTTA
CATTTTTTATTTATTTTATCTAATGTTTATAAAAAATTGTAAATATAATT
TCTTCAGAAAGTTTAGTATTTCCAAGGACCCCGAAAAAGCAAAATATTAA
AATTGTACAAAAGTATTTTAAGTAAATATGATTTGTATATATAATTCAAA
CTTATGTATCTAATACTTTTTCCTCATTTTTGTTTTTGTAAAAATATGTA
AGAATTTAGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044558XLOC_044558Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071765-exon-scaffold_63-1575043694:940702..940800TCONS_00071765-exon-scaffold_63-1575043694:940702..940800Clytia hemisphaericaexon
TCONS_00071765-exon-scaffold_63-1575043694:940022..940330TCONS_00071765-exon-scaffold_63-1575043694:940022..940330Clytia hemisphaericaexon
TCONS_00071765-exon-scaffold_63-1575043694:938159..938351TCONS_00071765-exon-scaffold_63-1575043694:938159..938351Clytia hemisphaericaexon
TCONS_00071765-exon-scaffold_63-1575043694:936634..936778TCONS_00071765-exon-scaffold_63-1575043694:936634..936778Clytia hemisphaericaexon
TCONS_00071765-exon-scaffold_63-1575043694:933582..933770TCONS_00071765-exon-scaffold_63-1575043694:933582..933770Clytia hemisphaericaexon
TCONS_00071765-exon-scaffold_63-1575043694:932645..933250TCONS_00071765-exon-scaffold_63-1575043694:932645..933250Clytia hemisphaericaexon
TCONS_00071765-exon-scaffold_63-1575043694:927793..928115TCONS_00071765-exon-scaffold_63-1575043694:927793..928115Clytia hemisphaericaexon
TCONS_00071765-exon-scaffold_63-1575043694:926884..927092TCONS_00071765-exon-scaffold_63-1575043694:926884..927092Clytia hemisphaericaexon
TCONS_00071765-exon-scaffold_63-1575043694:922541..924935TCONS_00071765-exon-scaffold_63-1575043694:922541..924935Clytia hemisphaericaexon
TCONS_00071765-exon-scaffold_63-1510915933:940702..940800TCONS_00071765-exon-scaffold_63-1510915933:940702..940800Clytia hemisphaericaexon
TCONS_00071765-exon-scaffold_63-1510915933:940022..940330TCONS_00071765-exon-scaffold_63-1510915933:940022..940330Clytia hemisphaericaexon
TCONS_00071765-exon-scaffold_63-1510915933:938159..938351TCONS_00071765-exon-scaffold_63-1510915933:938159..938351Clytia hemisphaericaexon
TCONS_00071765-exon-scaffold_63-1510915933:936634..936778TCONS_00071765-exon-scaffold_63-1510915933:936634..936778Clytia hemisphaericaexon
TCONS_00071765-exon-scaffold_63-1510915933:933582..933770TCONS_00071765-exon-scaffold_63-1510915933:933582..933770Clytia hemisphaericaexon
TCONS_00071765-exon-scaffold_63-1510915933:932645..933250TCONS_00071765-exon-scaffold_63-1510915933:932645..933250Clytia hemisphaericaexon
TCONS_00071765-exon-scaffold_63-1510915933:927793..928115TCONS_00071765-exon-scaffold_63-1510915933:927793..928115Clytia hemisphaericaexon
TCONS_00071765-exon-scaffold_63-1510915933:926884..927092TCONS_00071765-exon-scaffold_63-1510915933:926884..927092Clytia hemisphaericaexon
TCONS_00071765-exon-scaffold_63-1510915933:922541..924935TCONS_00071765-exon-scaffold_63-1510915933:922541..924935Clytia hemisphaericaexon
TCONS_00071765-exon-scaffold_63-1491911889:940702..940800TCONS_00071765-exon-scaffold_63-1491911889:940702..940800Clytia hemisphaericaexon
TCONS_00071765-exon-scaffold_63-1491911889:940022..940330TCONS_00071765-exon-scaffold_63-1491911889:940022..940330Clytia hemisphaericaexon
TCONS_00071765-exon-scaffold_63-1491911889:938159..938351TCONS_00071765-exon-scaffold_63-1491911889:938159..938351Clytia hemisphaericaexon
TCONS_00071765-exon-scaffold_63-1491911889:936634..936778TCONS_00071765-exon-scaffold_63-1491911889:936634..936778Clytia hemisphaericaexon
TCONS_00071765-exon-scaffold_63-1491911889:933582..933770TCONS_00071765-exon-scaffold_63-1491911889:933582..933770Clytia hemisphaericaexon
TCONS_00071765-exon-scaffold_63-1491911889:932645..933250TCONS_00071765-exon-scaffold_63-1491911889:932645..933250Clytia hemisphaericaexon
TCONS_00071765-exon-scaffold_63-1491911889:927793..928115TCONS_00071765-exon-scaffold_63-1491911889:927793..928115Clytia hemisphaericaexon
TCONS_00071765-exon-scaffold_63-1491911889:926884..927092TCONS_00071765-exon-scaffold_63-1491911889:926884..927092Clytia hemisphaericaexon
TCONS_00071765-exon-scaffold_63-1491911889:922541..924935TCONS_00071765-exon-scaffold_63-1491911889:922541..924935Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_63supercontigscaffold_63:922541..940800 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	2.78289e-05	0.0873329	0.027285	2.68443	3.70112	4.98634	4.0733	6.93659	5.52217	3.93882	2.07417	3.97505	0.257495	1.15181	1.1751	3.65713	5.05586	6.07884	3.11201	0.912929	3.20463e-05	1.43203	2.44507	0.459369	1.54579	0.93907	0.0568013	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00071765 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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