TCONS_00071733 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071733
Unique NameTCONS_00071733
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1345

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071733 ID=TCONS_00071733|Name=TCONS_00071733|organism=Clytia hemisphaerica|type=transcript|length=1345bp
AGGGAGTTCTCAGAGATGATGCTGGTCTACGAGAAAAAGCATTGATCCCC
ATGGAAAGTGTCACAATGCATCTTCCAGCTAGAATAGGTGACTACACTGA
CTTCTATTCTTCAAGAGATCACGCTACAAATGTTGGAACAATGTTCAGAG
GAAAAGAAAATGCGTTGATGCCTAATTGGTTACACTTACCAGTTGGATAC
CATGGTCGAGCTTCATCAGTCATTGTTAGTGGAACACCAGTCCGTAGACC
AAACGGACAATCACGAGCACCAGAAAAACCACCAGCACATGGTCCCTGCA
AAGCATTGGATTTCGAACTAGAAATGGCTTTCTTTGTTGGTCCTGCTAAC
AATCTTGGAGATCCAATCAAGGTTGCTAATGCACAAGAAAACATTTTTGG
GTTTGTCATCATGAACGATTGGAGTGCAAGAGACTTCCAGAAGTGGGAAT
ACGTACCACTCGGTCCCTTCACCGGTAAAAGCTTTGCAACCACCATCTCA
CCATGGGTTGTGACCGTGGATGCACTCATGCCACACGCTATTGATAACGT
CGAACAAAATGATCCAGCACCATTGCCATACCTTAAACACGATGACAAAT
TCCGATTCGATGTCAACCTGGAAGTCGCAATCAAGAGTGAAAATGCAAGC
GAAGCTGGAGTTGTTTCAAGATCAAATTTAAAGTACATGTATTGGACACC
GAAACAACAGTTGGCTCACCATTCAATCACTGGCTGTAATATGCAGCCTG
GAGATCTTATGGGATCTGGAACCATCAGTGGCCCTGAACCTGAATCATTC
GGTAGTATGTTGGAGCTCTCGTGGAATCGTACCAAAGACGTCCCAATCGG
AAACGGTGAAACCcgaaaaatgattttagatgGAGACGAGGTCATAATGT
CTGGTTATGCTCAAGGTAATGGTTACAGAGTCGGATTTGGACAGTGTGCA
GGAAAGGTTCTTCCAGCTCACCCCTTATAAACGAAACAGACTCAAACTAG
TCTCTTAGTATGGAGTGATCAACTGCTCGTGGAGTTAGGAGTTACCTTTA
TGCTTGAGAACTGAAACTTGAATCGGCTTACATTTAGCGAACACACCTGG
CTCCCATTTAACAATGTTGTATTGGTTAAAGGAACTCCAAATCTCCCAAG
ATTGCCACCGCAAAcgaaaaaacctaaaaattttaacaagtagaattgtt
ttgttctttttttactcattttatttatttctttctatttttaaaaacct
atgtagtctttttttaaatttgtgaaaatacaaaaattattgACGATGAT
GACAATCAAAATTTAACGGCTATTTTTCTTACACCCCACTATGAG
Run BLAST on NCBI

transcript from alignment at scaffold_63:342280..352395-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071733 ID=TCONS_00071733|Name=TCONS_00071733|organism=Clytia hemisphaerica|type=transcript|length=10116bp|location=Sequence derived from alignment at scaffold_63:342280..352395- (Clytia hemisphaerica)
AGGGAGTTCTCAGAGATGATGCTGGTCTACGAGAAAAGTAAGAAGTTATT
CAAAAACTGTGGTATCCATTTTTATTCCAATGTAGTAATACATTTTGAAC
AGTTTTGAAAACTCTTATCCTTGGGGCGAATTGCTGATTTCANTTGTTAA
CAATCGATACATGATTGATAAGTAATCGATAGGTTGTATGTAGTCGATAT
GTGATCGATAAGTAATCGATAGCTTGGAAATAATCTATCGCTGATTGATA
CATGATTGATAAGTAATCGATAGGTTGTATGTAGTCGATATGTGATCGAT
AAGTAATCGATAGCTTGGAAATAATCTATCGCTGATCGATACTCAAGATT
TTTTGAAGGTCTGATTACCTATCGATTCTATTGGAGTGGCGCGATGTCTT
TCACATTGTAGATGTCTTTCACATTGTAGATGTCTTTCACATTGTAGAAA
TTTTTCCTTTTCCCTTCTTTAGCCGAAGAAGCGAATCGGTGTTGCAATCG
GCAACTATGTTTTGGATTTGTCAGAAGTCAAACATCTTTTTAACGGTTCT
GTTATGTCTACAAAACAAAATGTCTTTGACGAGGTAACAGATTTTTATGT
AACAGTATCATTTAGAGTTTCATACAGTATTGTTGAATACAATCATGTGT
TTTCAGATAAATTTGATTCTTCAATTTTTTTGAATGTGCTTTTTAACTTT
AAAGAGGTGCAAATTTTGATTTTATTGTTTGAATAATATTCTATCTACTC
TAGTATCTATATTTTGTGGTTGCATTTTGGTTACTTCTTTAATTAGGAGC
TTCATCCTTTTCTAGTCAACTTTGAATGAATTCATGTCACTTGGTCGTCC
AGCTTGGCAAGAAACCAGAGCTACATTACAAAAGATTCTATCAAAAAATG
AGGTTTGTTAAGGAAAATTATGATTTTGATGAAAAATAGTAATAAAGTTT
ATTTAACTGAAAAATTTAACTAAGAAAGGCTGTATGAAATAAGTTATAAG
CGATAAAGGAACTAACAAATTTTAAGTGCTCTTAATAATTAAGCAACATG
AAATTGTTGATTCCAAGTACGCAGTTCATACTTTAGTTTGTGTTACTTTC
CTTTCAAAGTTTTGAGTTCTAAGACTATGCTATTATTCTCTTTATCTACT
TTCTTTCAAGGGAGTTCTCAGAGATGATGCTGGTCTACGAGAAAAGTAAG
AAGTTATTCAAAAACTATGGTATCCATTTTTATTCCAATGTAGTAATACA
TTTTGAACAGTTTTGAAAACTCTTATCCTTGGGGCGAATTGCTGATTTCG
CCATTGACAAATGAAAAGGTCCAATCTCAAAGTTATTGCCTGAGAAAACT
AAGAATTTTTCTGTTTGTCTGAGCACAAATTTTGAAATTGAGCCTCACTA
TGCAAAATGAGCAAATCTCAAATTTAAGGCTAGCTAGACAGAAAAACTCT
TAGCTTTCTCAGACACTAATTTTGTGATTTGTCCTTTGGATTTGTCAACA
GCGATTTGTTAACTAACGAAACTATTCATTCTCTTGTTTAGAGCATTGAT
CCCCATGGAAAGTGTCACAATGCATCTTCCAGCTAGAATAGGTGGGTATC
TTTCATCATAAAAACAAACATACAATGCAAATTGATAATGTGAAAAAAGT
GACTAGTTCCCAGTTGGTCAACCATTGCTCAGTTCCGCAGTGCTGAAAGG
TTTCACAGCTCAAAAGAACTATACTTGGTGATCAAGAGTAGTTTTCAGTA
GTATGAGTTTGAAAACTCCCTTGGTCATCCTTCATTGAAATAAAATCCAA
TAGATGAGGCCCTGTTCTTCTTCTTCAATCCTGTTCTTGGCCTATGTACA
GCAGCAAAACTTTGCATTGGCTAAGTTGCAAAAAGTGACAATATTTGACA
ATGCAAATACTGCAGAACTTTATAGCACTGAATCTTTGGATTGTACCTTA
TGCTTTGAGCCTTTATCACTCTTTTTTCCACACAGGTGACTACACTGACT
TCTATTCTTCAAGAGATCACGCTACAAATGTTGGAACAATGTTCAGAGGA
AAAGAAAATGCGTTGATGCCTAATTGGTATGATGATTTATTGTGAAACTT
TTGCCGCATTGTTGTGAAATATGGAATGTAACACTAATACTTATATGTGC
CATTGATTCAAAAATAATTTAGTAATCTTTTGGAGAATTAGTTTAATTTC
TCTTCCACATCCCACACTGTTATTGCATGGCCTTTCTTTCATTAAAATAA
AAGTAATGTTGAGACTCAAGTAAGTCTTCGTTAGGAGGTTTAATTAAATC
TTCATCAAAGTTGCTTTAAGTCACCTAGTTAATGAATGGTTTCTTCCAAA
ATAAATACTACTTGTATTAAGAGTAAAACTTTTTGAAAGCTTTCTCCCAA
AACGTCTAGTTACGTTATCTAGGGAAGAAATTTTGACAGGATGAAAATAA
ATTCCCAAATTAAGTTCCGGCCAAATTTAATTTTTTCTTTTTATGTCAGA
TATCAATGTTTTCAGCCTGATTTTTATCTGACATTCCGATGGTGGATTGG
CGGCCGCCCACGCTAAAGGAGCGGGCCAATTTCCCATTGGAGAGGAATGA
TAGTGCCGCATCCTCAGTCGGGTTCAACAGCCCTTGCGCCTAAACCCATA
AATATTTCGGTTTGACCCACCAATCCCCGAAAACAAGGGCTGGGTTACCA
GACCTCCCGCTGCAAGATTCTTGATGCGGTCTTGGAAAATTCCGTAATGT
AAACCTTCCAGATGTTGAGAATGAGCGATTCGTAGAGGCCCATGTGTCCG
CACGGTGGCCTGCAAATTTGCAAAACTATATTATTATAATGTTGAAACAA
ATTTCTTACAATTTCACTCCTCAGGTTACACTTACCAGTTGGATACCATG
GTCGAGCTTCATCAGTCATTGTTAGTGGAACACCAGTCCGTAGACCAAAC
GGACAATCACGAGCACCAGGTAATTTAATCACTGTCTTTTTCTCAGCTTG
TTTTTTTTTATTATGCAAAAAATCCTTAGTCCAGTACTTTCAAGCCTAAC
TACTAAATTCTGTAAGCGAAGCAAGTATAGTTGTGTTAACAACTGCAAGG
CTCTGTCCAAGGCTTGTTTTAGACTACAACGGATAATAAGAGACAGTTGA
GTAAAGTTCATGTTTGATTAATTCTTCAATTTTTTTATTTATAATTCCAG
AAAAACCACCAGCACATGGTCCCTGCAAAGCATTGGATTTCGAACTAGAA
ATGGTACGTCCCATATTGTTGTAAAAGGATGTCGACCGGGCGATCGGGCC
TGTCTGGGAACGGACGCTTCGCAGCGGAACCTAAATTAACTAGACTCGTA
GCGGCCTTTTGTTAAATTTTTACCGGTCATTTACCGGCCCCTAGAAGACC
GTCTAAAGACCGGTCCTATTTTCAGGTATTTTAAATCGCTTGGGGAGTCA
CTATATATTTGGATAGGGTAGTTTAAAAACGGGCGTGCCTTTATCAACCT
ACAGTTTTTTCGTTTGTCAAATTTATTTTAAAATGCTTAAGGTCTATAAA
CTTATTTTTCATATAAAGTTTATGGAAATCTCATATTCGTTTTATTTCAA
GGCTTTCTTTGTTGGTCCTGCTAACAATCTTGGAGATCCAATCAAGGTTG
CTAATGTAAGTAAATTCTGTCATCTCGACTCGAGACGAAAAATACGAGAT
TTGCCAGGTTTTATTCATGTTCCTTATGTCTTTAAACCCAAACTTATTTG
ATGTAGTAGTATGTTTCATGTTTCCTTTTTTTCGGTTACGCAGTTTTATA
TTTTGATCATTCATAACTAAAACATAACTTTGTGTTCACAGGCACAAGAA
AACATTTTTGGGTTTGTCATCATGAACGATTGGAGTGGTAAGATACTTGT
CTTCGCTAGTGTTATGAGTTTCCCCAATCAAAATTACAGCGAATAGAATC
CTTTCGTTAGGGGTTGGAGGTGACAGAGATTCTAGAAGAAGTTAATGAAT
GTATTATCATTATTATCAATATCACCAATATCATGAATTAAAAGCGCAAT
GCCACTTAGCACAAAGTTTCATACAATTGGTGTTTCCTCTTTTAGTTCTA
AACTGAAGTGGGTTACGAATGATTTATTATATGACTTATGTCTCTCAATA
TTTTCTATGCCCACTATATTGTTATAAAACTATATCCCATATTGTACTCA
GTACCGTGCACTATAGCTATTACGTAATTCTTTATCTGTTGTAGCTTCTC
AACTTTTCTTCTTGTAGCAAGAGACTTCCAGAAGTGGGAATACGTACCAC
TCGGTCCCTTCACCGGTAAAAGCTTTGCAACCACCATCTCACCATGGGTT
GTGACCGTGGATGCACTCATGCCACACGCTATTGATAACGTCGAACAAAA
TGTAAGTTTTCTCTTAAGGAGCTTTTTTATTTGTGTAATTTAGGGCTGTT
CAAGGATCTTTTCCCAGGACCTAAGCAAGTTTGCCAGTCCGCCATAATTG
AAATGTCATTTGATCCAAGTAAATCTGCGACGTCTCTCTGAAGGCCCCTC
TTTCCATAGCTATCTACCTGAAGATTTAGGAAGGCGCCACTCTCTCTCCC
TGGATTGCTTCACGTACCCTTGATCTTTCTCTTAATGACTGAGCATCAAG
CAGAGAAGCATCTAGTACCATTTTTTGTACTAAGTACGAAATCTTGGGTA
TGACTCAGCCGGGAACTGAACCCACAAACTTGCGCACCATAGCCAAATGC
TCTACTTTTACACTAAAATGTAATACAATTTCACCCTCTCTTCTGCGATT
TCTGTTCTAATAATAAGTTAAGTATTCTTGACGAAACATCCAGATTTCCT
TAAGGTGGTTCAACACAACTTCTTGAACAGTAGTTTTTGACAACAGCTAA
TTTGTGATCTTAAGTATATTTTTATTATCGACTTGTTACAGCTCTTTGAT
TAATTAATTGTTTATTCTTTTACAGGATCCAGCACCATTGCCATACCTTA
AACACGATGACAAATTCCGATTCGATGTCAACCTGGAAGTCGCAATCAAG
AGTAAGTGTGTTTTTCAGTTCAGTTAAAGTTCTTTTTTATTGGAAAATGA
GATAAGACTGTCAGTTAACCTTCAAATTACCCTTAACCTGCATAAACCAT
TAAGTGAAATCACTCCGCAACAAAATTCTCAAAAAGTTTTCTGATTTCAA
ATGCACGTAGACACCCCAAGAAAAAATGCTAAGGTCGACTTTTTATTCAG
ATTGGGTCACAGTGCTTTGGTCTAACCCTACCGGTATTGGACCGAAAAAT
CGGGCGATCTGATATGATGTCAGTGGCACTTAATGGGTTAAGGAGGTCCT
CTCGTGTTGACAGTTTGAAAATGTTTTCAAAAATTTGCCAAAATTAATTG
GTTTGGTTTTTCAGGTGAAAATGCAAGCGAAGCTGGAGTTGTTTCAAGAT
CAAATTTAAAGGTAATTAGCTCATTTTACTGCTAGTGGTAGCTAGAGGGT
TTCAGAAATCTGCAAGCTTTAGAGTTAAAGTTGGTCGAGGTTGGGACCGT
GAAAAACTAAGCCAGTCTACGGTTCATTGGATCTAAAAGGTTAAAAAAAT
CAATCTGTCAATCAGTCTTCTCACCATAAAGCGGCTATAATAACAATAAC
AAATCTTGAATCGTTTTCTCGCAGTACACAAGATGGGGCCGAATGCCAAT
TTTGATTCAGTTTCTCTGAAAGAAAAATGGCAAATATTAAGAAGAGGATT
TTTTTTCATTAATTGACCTGGAACATCAATTGGGTAAAACTAAACCTCAA
TACAGCGGTTACCCAAAAGGTTATATTTATCATCGAGTTTATGAATGGAG
AGATAGAGAACAACGAAAACTTCTTCTGAGTTTGATTTTAAAGGTAACAT
TTGAAAAACTCGTAATATTAATAATTTCTGGCCTTTTTGGAAAGACTTTA
AGAGAGAAAAATTGCAAAACGTGTTTTTAGCTCACTTTTTTAAAATTTAG
TCTTTTTAAAAGTAAGGGTCGTTTATTGGTTCCATCCGTACATACCCGAC
ATCGTGCAAATTATGGCCACTTCCCCCATCAGTAAATTTTGACGATGAAA
CTTCCTGTAGTTTCGAAACTGAAAACGTAGACAAAAGAGGCGTGTTATTA
GATACCTTGCTCTTTGGATAAGACTATTGTGTGGTTTCTATGCTACTTGT
AATCTGACCTAAGCGTGTCTGAGAATGTGCTTTTTTACTTTTTTTTTCGT
TTCACAATATTAACTGCTGTTCTATAATTAATCCCACGCAATTTTAACGT
GTTAATATAAAAAATACTGTCATATTATCAGTCATCGTTAGTTTGGTGTT
ATAATAGCGAAGCTTTTTTACAACCCACATTTCATTTCATCAAATTTCTC
AAATTTGCATCTTATATCGTCGTTTCATCGGGACTGTTCTTCAATTTTCC
TTTTCTATAAAGAACTTCTTGTTAATCTGGTCCCATCATCGAGATAGTAG
GGGGCCAATCCTTAGGATCCGTGACATCTTTTATGCGACGCAACCGCATG
TAGTTAGTTCGAAAGTAGGAAGGTTTTTAAGACTTTTTTGAGAGGGGGCC
CGCGAATTAGGCCCGGCAAAAGTTTTTATGACTAAAAAACTGACGTTTAC
AGGCAAAACTGTAAGAGAAAAAAATTAGTAAAAAAATTGACGTTTTTCAA
AACTCAAATCCCAAAGACATGAATGGGACCATCGGAAAGAGCATGAAATT
CTGAGCAAAAAAGTATACTACAACAAGTCTCTTACTCGAACACACAAAGA
AATACGGCCACTTAAAGTTCAAAATTATGTCAGACTCCGTACGGTTTAGA
CAAAATTTGACGTCAATCGTACTCTATCTGACAGAATTTCCTACTTACGA
ACTAACTACATGCGGTTGCGTCGCATAAAAGATGTCACGGATCCTAAGGA
TTGGTCCCCTACTAAGAGATTTCTCTGAGAACCCGAAAAAANAGGATCCT
AAGGATTGGTCTCCTACTAAGAGATTTCTCTGAGAACCCGAAAAAATGTT
GTTTCCGGTCCACCATCCGGGTGAAAATTTATTTCGTCGTCACCCGGCCG
CATTTTTTTTCGTACATCATCGTTAGGGTTAGGGTTAGTTTGTTTGTTTG
GAAAACTTTCATGAATCAGTTTTTGAGCCGTGTGATTTATCGCACGTGAT
ATTTTATATTCTACTGTAAAATGCACGCCTAGATATCTTGGAATGAAGGT
TTTATCCTGATCATTGTTATAGAAATGAAATTTTCTTCATCTCAAACTAA
ACCCTGCATTGTTTTTGTTAATTCTTGCNCGAAATTGCTTCCCTTCCTAA
GATCCACTACTTCTTCTTCTTAAGAAAATCCAATTACTTCTTCGGCTTTT
AGGGATTATTAAAAAAGGGTATTCGAACTTTAATGTACAGTACCCTTTAN
GAAATGTTTTTTTTTTATATACAACTTGGTTTTTATAAAAGAATCATGCT
GATTTGTGAGTAAAATAAATAGAAACATTCACAAAGTGGGGACTTTTCAG
TANTGAATAGAGAGGGAACCTTTATTGAAGAATTCGCTTTCTATGCTATG
AAAAATCTTCATCTCTTTCTTCAGTACATGTATTGGACACCGAAACAACA
GTTGGCTCACCATTCAATCACTGGCTGTAATATGCAGCCTGGAGATCTTA
TGGGATCTGGAACCATCAGTGGCCCTGTAAGTCATACTTTTTCTCTATTT
TGATTGGCTGAACGAGCAACTTTTAGGGGACTTTATTGTTTTTGGTAACA
TGTCTTATTGAAATAGTCTTTTATCAATTGCCTTTGGTGATTCGATCGGG
CTAGGTTCATGTATGGGTTTATTTAAGGTTTAAAATTTAAAAATCAAAAG
TTATGTGACAATATTTTGGTGTAANGGGATCGAAATTTAGCAAAAAAAAA
ATTTTTGCGGCCGGCCGGGTGAGTGTTTTTTTCGTCACCCGGTGGACCGG
AAACTTAAAATACTGATACCCTACAACCTCGAAAAATTTCTGTTCCCAAG
GTTTTTCGCGCTTTTCAACCCTGAAAAAATTAAAGTACCACTCAATAAAT
ACGCAAAGTTTGACCATTGATTTGACTTACATATGTTTGTTGGAGCAAAT
TTCCCCTTTTAAATTACAAAAGTGCCAAGAACGAAATTGCTTCCCTTCCT
AAGATCCACTACTTCTTCTTCTTAAGAAAATCCAATTACTTCTTCGGCTT
TTAGGGATTATTAAAAAAGGGTATTCGAACTTTAATGTACAGTACCCTTT
AAGAAACTGCTAAATCTTCCTCATCTATAGAGAGGGAACCTTTATTGAAG
AATTTGCTTTCTATGCTATGAAAAATCTTTATCTCTTTCTTCAGTACATG
TATTGGACACCGAAACAACAGTTGGCTCACCATTCAATCACTGGCTGTAA
TATGCAGCCTGGAGATCTTATGGGATCTGGAACCATCAGTGGCCCTGTAA
GTCATACTTTTTCTCTATTTTGATTGGCTGAACGAGCATTTTTTAGGGGA
CTTTATTGTTTTTGGTAACATGTCTTATTGAAATAGTCTTTTATCAATTG
CGTTTGGTGATTCGATCGGGCTAGGTTCATGTATGGGTTTATTTAAGGTT
TAAAATTTAAAAATCAAAAGTTATGTGACAATATTTTGGTGTAATTTCTA
ACATTTCGGTTTCAATCTAAAAGCTCCCTCTAAATATGAAAAATCGCATC
AACTAATATGAACGTATGACAAACGTGTTATTCGGCATGTCCTTTATTGA
CTTGTTTCATAAAATTATCAATACCTCAAACATCTTTATAAAAAATCTCT
CATTTTGAAATAACGTGACTTTCTTTCCCTATTGCAACGGTTTTGATTTT
AATAAGTTCGCTAGCTTGCGTGCAAGTGCGATTTTCTTTATATATTACAT
AAAATATTTTTAAAATCCCTTTAAGATGTCAAAGAGACTCGAATTCTTTC
ATGTCTAAAGTTCGAGACGTAAACCATGCATAGGAAGTCAAATCAAAACT
CTATACTGCTCATAAGCCACACCCTATATCAAGTCAAGAAAATGTTTTTA
GAATGGCAATTGGACGAACCCAAATCCAATTTGTAAAAATTTTTGGTATG
CTAGTGGAGCCTTGTATTTTGCATTTCAATGAAGGATAATTTCATCCAAA
GAAGTGACTTATCATTCGTTCTTCGTTTACTTTTTAACATCTCTTCAAAC
CGTAGTCTAGTGGTATGTATCGAAATATCTGTACAACAATAACTTAAGTT
TCTAAGTCGTCAAACCTCTGAACATAATTATTATAACATCAAAATTAAAA
GTTAAAATCCAATAAAATTGAATTAAATTCTTATCAACAGAACATGGTTT
GTACTTCTAAATCATAAAAACTCCGAACATAACAATTATTATAACATCAA
ATTTAAAAGTTAAAATCCAATGAAATTAAATTAAATTCCATCAAAACATA
GTTTCAAATCATAATCATTGAGGGACCCAAAAACTTTTCTTACAAAATCT
TCTCAGGAACCTGAATCATTCGGTAGTATGTTGGAGCTCTCGTGGAATCG
TACCAAAGACGTCCCAATCGGAAACGGTGAAACCCGAAAAATGATTTTAG
ATGGAGACGAGGTCATAATGTCTGGTTATGCTCAAGGTAATGGTTACAGA
GTCGGATTTGGACAGTGTGCAGGAAAGGTTCTTCCAGCTCACCCCTTATA
AACGAAACAGACTCAAACTAGTCTCTTAGTATGGAGTGATCAACTGCTCG
TGGAGTTAGGAGTTACCTTTATGCTTGAGAACTGAAACTTGAATCGGCTT
ACATTTAGCGAACACACCTGGCTCCCATTTAACAATGTTGTATTGGTTAA
AGGAACTCCAAATCTCCCAAGATTGCCACCGCAAACGAAAAAACCTAAAA
ATTTTAACAAGTAGAATTGTTTTGTTCTTTTTTTACTCATTTTATTTATT
TCTTTCTATTTTTAAAAACCTATGTAGTCTTTTTTTAAATTTGTGAAAAT
ACAAAAATTATTGACGATGATGACAATCAAAATTTAACGGCTATTTTTCT
TACACCCCACTATGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044548XLOC_044548Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071733-exon-scaffold_63-1575043694:352359..352395TCONS_00071733-exon-scaffold_63-1575043694:352359..352395Clytia hemisphaericaexon
TCONS_00071733-exon-scaffold_63-1575043694:350805..350854TCONS_00071733-exon-scaffold_63-1575043694:350805..350854Clytia hemisphaericaexon
TCONS_00071733-exon-scaffold_63-1575043694:350320..350410TCONS_00071733-exon-scaffold_63-1575043694:350320..350410Clytia hemisphaericaexon
TCONS_00071733-exon-scaffold_63-1575043694:349427..349521TCONS_00071733-exon-scaffold_63-1575043694:349427..349521Clytia hemisphaericaexon
TCONS_00071733-exon-scaffold_63-1575043694:349143..349195TCONS_00071733-exon-scaffold_63-1575043694:349143..349195Clytia hemisphaericaexon
TCONS_00071733-exon-scaffold_63-1575043694:348741..348794TCONS_00071733-exon-scaffold_63-1575043694:348741..348794Clytia hemisphaericaexon
TCONS_00071733-exon-scaffold_63-1575043694:348509..348554TCONS_00071733-exon-scaffold_63-1575043694:348509..348554Clytia hemisphaericaexon
TCONS_00071733-exon-scaffold_63-1575043694:347995..348128TCONS_00071733-exon-scaffold_63-1575043694:347995..348128Clytia hemisphaericaexon
TCONS_00071733-exon-scaffold_63-1575043694:347345..347420TCONS_00071733-exon-scaffold_63-1575043694:347345..347420Clytia hemisphaericaexon
TCONS_00071733-exon-scaffold_63-1575043694:346935..346981TCONS_00071733-exon-scaffold_63-1575043694:346935..346981Clytia hemisphaericaexon
TCONS_00071733-exon-scaffold_63-1575043694:343900..344001TCONS_00071733-exon-scaffold_63-1575043694:343900..344001Clytia hemisphaericaexon
TCONS_00071733-exon-scaffold_63-1575043694:342280..342839TCONS_00071733-exon-scaffold_63-1575043694:342280..342839Clytia hemisphaericaexon
TCONS_00071733-exon-scaffold_63-1510915933:352359..352395TCONS_00071733-exon-scaffold_63-1510915933:352359..352395Clytia hemisphaericaexon
TCONS_00071733-exon-scaffold_63-1510915933:350805..350854TCONS_00071733-exon-scaffold_63-1510915933:350805..350854Clytia hemisphaericaexon
TCONS_00071733-exon-scaffold_63-1510915933:350320..350410TCONS_00071733-exon-scaffold_63-1510915933:350320..350410Clytia hemisphaericaexon
TCONS_00071733-exon-scaffold_63-1510915933:349427..349521TCONS_00071733-exon-scaffold_63-1510915933:349427..349521Clytia hemisphaericaexon
TCONS_00071733-exon-scaffold_63-1510915933:349143..349195TCONS_00071733-exon-scaffold_63-1510915933:349143..349195Clytia hemisphaericaexon
TCONS_00071733-exon-scaffold_63-1510915933:348741..348794TCONS_00071733-exon-scaffold_63-1510915933:348741..348794Clytia hemisphaericaexon
TCONS_00071733-exon-scaffold_63-1510915933:348509..348554TCONS_00071733-exon-scaffold_63-1510915933:348509..348554Clytia hemisphaericaexon
TCONS_00071733-exon-scaffold_63-1510915933:347995..348128TCONS_00071733-exon-scaffold_63-1510915933:347995..348128Clytia hemisphaericaexon
TCONS_00071733-exon-scaffold_63-1510915933:347345..347420TCONS_00071733-exon-scaffold_63-1510915933:347345..347420Clytia hemisphaericaexon
TCONS_00071733-exon-scaffold_63-1510915933:346935..346981TCONS_00071733-exon-scaffold_63-1510915933:346935..346981Clytia hemisphaericaexon
TCONS_00071733-exon-scaffold_63-1510915933:343900..344001TCONS_00071733-exon-scaffold_63-1510915933:343900..344001Clytia hemisphaericaexon
TCONS_00071733-exon-scaffold_63-1510915933:342280..342839TCONS_00071733-exon-scaffold_63-1510915933:342280..342839Clytia hemisphaericaexon
TCONS_00071733-exon-scaffold_63-1491911889:352359..352395TCONS_00071733-exon-scaffold_63-1491911889:352359..352395Clytia hemisphaericaexon
TCONS_00071733-exon-scaffold_63-1491911889:350805..350854TCONS_00071733-exon-scaffold_63-1491911889:350805..350854Clytia hemisphaericaexon
TCONS_00071733-exon-scaffold_63-1491911889:350320..350410TCONS_00071733-exon-scaffold_63-1491911889:350320..350410Clytia hemisphaericaexon
TCONS_00071733-exon-scaffold_63-1491911889:349427..349521TCONS_00071733-exon-scaffold_63-1491911889:349427..349521Clytia hemisphaericaexon
TCONS_00071733-exon-scaffold_63-1491911889:349143..349195TCONS_00071733-exon-scaffold_63-1491911889:349143..349195Clytia hemisphaericaexon
TCONS_00071733-exon-scaffold_63-1491911889:348741..348794TCONS_00071733-exon-scaffold_63-1491911889:348741..348794Clytia hemisphaericaexon
TCONS_00071733-exon-scaffold_63-1491911889:348509..348554TCONS_00071733-exon-scaffold_63-1491911889:348509..348554Clytia hemisphaericaexon
TCONS_00071733-exon-scaffold_63-1491911889:347995..348128TCONS_00071733-exon-scaffold_63-1491911889:347995..348128Clytia hemisphaericaexon
TCONS_00071733-exon-scaffold_63-1491911889:347345..347420TCONS_00071733-exon-scaffold_63-1491911889:347345..347420Clytia hemisphaericaexon
TCONS_00071733-exon-scaffold_63-1491911889:346935..346981TCONS_00071733-exon-scaffold_63-1491911889:346935..346981Clytia hemisphaericaexon
TCONS_00071733-exon-scaffold_63-1491911889:343900..344001TCONS_00071733-exon-scaffold_63-1491911889:343900..344001Clytia hemisphaericaexon
TCONS_00071733-exon-scaffold_63-1491911889:342280..342839TCONS_00071733-exon-scaffold_63-1491911889:342280..342839Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_63supercontigscaffold_63:342280..352395 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

min expression (0 tpm) - - (7.82038 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0.00529224	6.53735e-10	2.00912e-06	4.0625e-10	2.70519e-05	8.78748e-07	0	0.00163009	1.77692e-09	0	0	1.38369	0	0.914953	4.69027e-06	0	0	0	0	7.82038	0.391432	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00071733 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
ZOOM
x 1
POSITION
0
20040060080010001200Expect = 1.51e-169 / Id = 70.72SequenceFAAA
Match NameE-valueIdentityDescription
FAAA1.511e-16970.72Fumarylacetoacetase OS=Homo sapiens GN=FAH PE=1 SV... [more]
back to top