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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071720 ID=TCONS_00071720|Name=TCONS_00071720|organism=Clytia hemisphaerica|type=transcript|length=1068bp
caaagatggtagcCTGAGCAGTGaagtaaattgaaaaaaatcaatttctc
gCAGCCAGCAGGCAGCGCAGCTCGCTacccttttttgctttttactCGAC
TTTCagctttttcaaggttttgtcgAACTGCTTTCGTCTGTCTACAtTAA
GGAGCTGATCAAAATAGCATGGAAGGTCCACCTGCTGATGGCGATTGTTC
ATTTGGACCATGGCAAATTTCCTCAAGGAGAAGTCCAATTCTAAAATCGA
ATGAAGCTGAAAGTTTGGAAAAGGAGCTTGGTATCCCTTTACCAGAGATG
TTGTTTGGTGACACTAATCTGACAATTCACAATAAAGAACatgattttaa
aattgttttttgtgcAAAAGATGCTCTCAAATTGGTTGATAATGAAAAAG
ATTTGATGAAAGTTGCAGTAGCTGAAGCATGGCAGGAATCTAGAAAGGAT
TGTGAATATATTAAGAATGTGATTCGACCCTTTGATTGGACTTACACAAC
AGCTTATAAAGGAACTATTGTTAATGATACAAATGTCACTGAGAAAATGA
CAGAGGAGCGAATTGATGTcgagaaattgaagaagaaagaaagaatTCAT
TTTTATACTGATCTCATTCTATTTGAAGATGAACTTGGCGACAATGGTAT
ATCCAAAATGAATGTCAAAATGAGAGTGATGCCATTaagtttctttgttc
ttttaCGATTTTTCCTGAGAGTTGATGATGTTTTAATCAGGATTTACGAT
ACAAGAATTTTTCATGAAGCAGGAACAAACTATATTCTACGTGAATACAG
TGCTAAGGAAAAGAAGATCAAAGATCTGAGGAATCCGTTAGCAGACGAAA
ACATACTTGTCGATGATCTTGATTGTATTCATGAAGAATTTGCAAAAATC
ATCTTTGAGCCTTCTGTGGAGAgatgatgcaacatattatagCATTTACG
TTTATCTTCACATAAAGAAAATTATAGGCGTTACGATTTTATCATTGCag
tcatttgaaaatttgcattgaaagAAAGATTCTTAAAAGGATCTTCCAAT
AATTTGCATCCCTTTTTT Run BLAST on NCBI transcript from alignment at scaffold_63:288218..301987- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071720 ID=TCONS_00071720|Name=TCONS_00071720|organism=Clytia hemisphaerica|type=transcript|length=13770bp|location=Sequence derived from alignment at scaffold_63:288218..301987- (Clytia hemisphaerica)
CAAAGATGGTAGCCTGAGCAGTGAAGTAAATTGAAAAAAATCAATTTCTC
GCAGCCAGCAGGCAGCGCAGCTCGCTACCCTTTTTTGCTTTTTACTCGAC
TTTCAGCTTTTTCAAGGTTTTGTCGAACTGCTTTCGTCTGTCTACAGTAA
GTAAGTTTTTTATTGTAAGTGTCTTCTTGGTTGATTATCTCTCTCTCTTT
ATGATGTCAGATGGTTTCATCTTATCTTCCTTCTTCCATCCAGTTTAGTC
ACACTAAAAACTACCAGACGGTACTAAATTGCACGTTCGATTGTGATATC
GAAGTAATCAATAATGATCGATAATAATCAAAGGCAATCATTTTGATTAC
TTTTCGATAACCTTCTATCATATTGGGCTATTCCATTTTTAAACCATACA
GGGGTATTGACGAACTTTTCCAGGGGGGACTGAGCCTTGATTTTTCCAAG
GGGCGACGTCCATATTCAAAGTCGCCACGCGTAACGGGAAAAGACCGTTA
GTGGGTAGGTATATTGGAATGTTGAGAGTTAGCTGTGGCATTGATNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNTCAAATCATGAAGACCGTTAAGAGGGTGGGTAGGTATG
TTTGAAAACTAACGGTCTTTTCCCGTTACGCGTGGCAAGATTGAATATGG
ACGTCGCCCCCAAGGGGCTTTTGCTCATTTTCAGATTTTCCAAGGGGGTT
ATTAAAGGTTTCCAGACCAGGGGGTTGTAATCCTCCTAAACTGGCATCAA
TAACAATATATCAATAGTCACTTTCCAGGCTCTTTTTCACAAAATTTTAC
TTTCCAGGGGTGTTGACTCCTAATTTCCATTTTATCAAATATGTTTCCAG
TCGCAGCGCGTCAAAATAATCTGAAACCAAGTTTATTTCAGCCATTTAAA
ACACGCGATTCACGCGCCAAAACCACTTTCGTTTTTTTTTTTTTTTTTAA
GATATATCAGTGTCATAGTCAGTGAGGCTGGAACTTCGATTTTTGAGGAT
TACGTTTTTACCAGTTTTTTAGCAATTTTTGCCTCGCTGGCCCAAATCTT
GCAACCTTTACCGTAAGGAAGATCGAAATTAGAGATTTTCAGCGTTCCGA
AAAAAACGCATAGCAGAAATTTTTTCATCTTCACAGGATCGATTCTCAAC
AACAAAATACATCTTTTGGTCTTTGGGTTTGTTTCTGACGTTTTTTCTTC
AAAGAATATCGATCACTTTCCTTTTCCCCTTGAGCGCGCGAGAAAAAAAT
GACTAGCTTGTTTTCGTGCGGGCGAATAAAGATGAGGCGGCAATCTTGCA
CTGAGGGTGCTACTTAGTTTCCGCCCTATTTTGCGCCCAGTATAGAATGG
TTCAAACACGGGGGTAGTCTAAATGATAAACTATGTCGTTCTGTAAGTGT
TTATTTTCTGAGAGATACAAATAGTATATTTGAATATTATTNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAATTTCGGAA
CGGCTTCAAGAAAGTCATAATGGCAGATAATTTTAAAAGTTTCTGAGGGA
ATGTGTGTAATTTATCGATGTTGATGGCTTGTTGATTCTTTCTTTAAAGA
AAAAAGATAACAGGTATAGCTTTTTCTGGAATATTGAGGTTCCAGCTACA
CTGATAGTATATAATTGGGCCATTCCAGAAAATTTTTGTTACCCCCCGTC
GGACGACGTGCATTTTTAAAATTTTTCTAGCATTGGAAATAACTTTTCTT
TTCCAGTGGTGGTCAGAAATTCCGATAAAAATCCATGTATATACTTTTGC
AAAATGCATTGGAAATTCCACTCTTTTTTGCCTTTTCTAATTCAATTGCC
TTGGAAATTCATATATTTTCTTTTCTCGCCTTGGAAATTTTGAATTTTGG
TGAAAACCTTTGCCCTCAGAAATCCTGTGTCGTCCGCACCCCTGTCAGCT
TGGTAAAATCTGTTTGTTTTCATTATGTGAACGAAAGTATTTACACATAG
TTGACACAGGAAAAAGTCATCAGATCACACGGGTGGGAAAACTTAAATTC
CGACGCCGTAATTTTCAAAAATCAATTTTTGCGTGTGATTTTATTAACTG
ATAAGGTGTGATTGTTTTGGCAGTGTGATTTCCGATATCACACCGCGGAA
TTTTTCAAATAGTTATTTTTATTTTTTCAAATTCGGCGTGTGAAATCCAA
TTTAACGCTTTTAAACTTCACTGAAAAGGCTTTATCAAAATCACACGTGT
GAATTCTAATTTCCGCAGGCAAATAAAAATTTTCAGTATGTTGTACACTA
TAAATTTTCGGCGTGTGAAATCCAATTTAACACTTTGTCAAACACTGGCA
ACTATAGTCCAAGAAGTATATAAAACTTACACTACAAAACTCGTACAGGG
GTATGAGGTAGAAGGACAAGATAGAAACAAGAAATCATCAGTCATTAGTT
CCCACGGGTGGGAAAGTCAAATTAACACGGTGGGAAGGTACAATTCCCAC
CCTTGTACTACGCATGCGTAAAGAAAACCACTAGTGAAAATTGGGCCGAA
ACTGTTCAGTTTGCATTCAAATCATAACATTATAAGGGTGTATTCGACCA
GTGTGTAACACAACGCTAAAGGTGAGGCGTCCCGCAAGGGCGGCCTCATT
CGTTCGCAATGGACTTGCGTCGCAAGGGCTCAGTGGATCGGTGAGACGGG
TTCGAGGTCATTAAATTGGCTCTCTAGTGCAGCTCCACTGTTGTGGAAAA
AGTGCCAGGATTCTCAAAGTAGCGCAAGTACATGACAGAACGAATGGGAG
CTATCGAGCCAATGCTCACGAATGATTGAATACATTTAACAATTTATCAA
ATACAAATAAAAGCCATTTTCCAAAGACTTGGTGGGGAATCAAAATTTCG
GTGTGTGGTTTTCGATAAGATAAGCGAGTGTAAAATGCTAAATCCGACGT
GGGGTTTTCAATTTAACACGCGAGGAGAGAGGGCCTGAAGTACGAAATTC
GACATGGGATTTTCGATCTAACACGTGTATTGTTCGATTCAGCACACATT
GTTTAAATCATGTGATCCTGCGTTAACCACGTCGGAAATTCAATTATACA
CGTGTGATTTTGAGGGGTGTGATTTTGCGTTTCCCACCGGCGTAAAAACG
AACCGATTCCCACGCGTGGGATAGCAGTGTGAAATGTATACTTTCACACG
GTGTGATTTTCACTTTCACACTGGTGTGATTTGATGACTTTTTCCTGTGT
GTGACGTCGAGAAAGTCAAAACGGTAGAGAACATCGTAGACTCACTATCA
CTCTACATCAACATAAAAATATTTCACATTTCTTTACAACATGATAATGG
ACATAATTCTGTAACTTTTTTGCTATATTGTTTTAATTTATTTTCAGTTC
ATTTACTCCCAAGATAATTACTTCGCACTTTTAACGACTTTAAAATCGAC
AATCACTGTTCGTTACAATTCATTGCACATTGTGTCTTAGACGATTCCAA
TTTCAGATAACTTGAGCTCCACCGCAGATGATTGAAAAAGTAAATTCTTC
GTATGCTTCAATAGAGGATATCGGCTTAACGTGAAAACTCAGATTTGATC
CCCAAATATTGCCCACAATGCTTTGCGCGGAAAAAAGTTCACAGTGAAAT
TTTTTCCGCACAAAGCATTGTGGGCAATATTCGGGGATCAAATCTGAGTT
TTCACGTTAAGCCGATATCGTCTATTTCTCAAACTTTGCCAATTCTGGTG
GTGATAAGATTTATATGAGAGTAAATGTCACAAAAAGGGCGAATAACATA
TCGAAAAATGGAGATTCTCAAGATAGGAGAAGGTATCTTAAATCTTGGTT
AAAGAAAATCTCTTTGATCTTTCTTTTTTTTCTTTTGTCAATTGCTTGAT
CATCAATTACTTGTGAGGTATTTCTCAAAATGAAAACACACAGATTTTAC
CAAGCTGCCTGTTATAGAAAATTCTGGAATGGCCCATTGGTTATCGAAGT
AATCAATTGGTTATCAAAGTTGTCAAAGTTATCAAAAGTAATCAATAACC
AGTGCATCACAAAGTGGGATATACACAAAACTCAACATCCTTACAAAAGT
TGTCTTTTTGATTTCCTAAACATTCGTTTTAAAAGTGTTCACTTCCACAA
TAATTTATGTAATTACTCTCTTGGTCAGTCGGGTTCAACATATACACAGT
TTTTAGTCACGTGGCTGAAGTGCATACTAAAACAATCCGGCCGGGGGTAA
GTGTCGAAGCAACACAGCAGTTTATTCTTTAATTATTAATGGTGCCGTGG
TATAGTGGTAGTCAACCTTGGCTTCTGTGCAGGAGGCCGGGTTCGATTCC
CACTCACAGCAGTTCACTTGACAAGTGAACTTCCTTCGCCCGGGTCAACC
CATGCCATGTGAGGGGAATTGGGTAGTCAGTTCAAGGTGCTGACGGGACG
CTCATTAGTAAGCGTCTATAGTTGCGAGAATAGGCCTCTAAAGGCTCCTG
CAACTTAACCAAATAGAAATAGAAATAGAAAAAATTAAAGAAATATCTTT
TGACAACTTTTGATAACGTTTGATGCTTCATTAGTGAAATATTCAATAAA
TTCCTAGTTTCAATTTTTAGTGGGCGTTTTTCTAGCGCTTCGTTTATCGT
GCAATTTTTGCGTCACACAAATTTTCTTGGCCGTTCAAAATAATTATGCA
TTGCCAAATTTGGTTCTCCATTGTTCTTACTGTCAAGTCAGGATCGATGG
TGACGTCACCTAAGAATAAAAAAAAAAGGGAATTTGTCAGTTTTATGCAG
ATATTAATTTGCGAGATATATTCTATTTGCTGTGCGCAAGCACATTTTTA
TAGACTAGTAGGAATACCTCTTTTTACTCGCAGGATCAATGGTAACTTAT
CATCTTCGTTATTTATAAAATAAAGCACGTAACCAAAAAAAGTTAAACTT
CCAAAAGTTGCGTATTTCCAGTTAGTAAACGATTCTGACAATTGACATAA
TTGATGATGATAATTTTTTCAGTAGGCCAAAATGTCTCGTATTGGGGGTT
TTCTAGTTCTAATTCTAATTCTATTCTAGTCTTGAGCCTTAAGCCTATGC
AAGATTGCAGCGTTTGGGTAATCGAGATAAAACTCGAAAAAAGCTGGTGT
TTTGAAGCGCTTCCGTGTGATTGCAATATTGCACTTTGTGACGCACTGAT
AACAATCAAAGTACTCGAACAGTTATCAAGTCTTCGAAGGGTTGTTAAAA
GAAAGTGATTGAATACTCACAATTTTTTTGAAATTTTGGTACTCGACATT
CGATTATCAATCGATAAGTGGATGTCGATTACTTCGATCATTATCGATTA
TTTTGATAATCAAATTTATTGATTAGTACCGTCTGGAAAATAAGAGCCAA
TCTGATTAAACCCCAAAAGAGACAGGGTCTTAAGCTTTATGATACCCTAA
ATACACCACACAAACCACAGCGGCACAACACCCACTGCTGCCCCCTTGTG
CAGTGCCCTTTCTTTCCTTCTAGTTCTTCTAATGTAAATGGTGCCTTAAA
AAAATCAAACGATATTCGTCGAATGCTCAAACAGTTTTATTTGAATCGTC
TTTCAAAATCAAAAGTAGACAAAAGCAAAAATCTACGAAGATTGCTTGTT
GTCAGGTCACAGGTCAGGTAACTTTTGTGCTGTTCACTGCTAGGGTANCC
TAAATTACTAAAATTAAGCTTTTAGGAGTGTGATTGACCACACGCCTGAA
ATTTTCAAATGATGCAGCCTGGGGTACCATTTTAAAATGGCCTTTTTCCC
AGTCCTAGCTACCAAACCGAGAAAAATTTTTGTGGCTTCAAGCAAAACCA
TTCAAGGTTATTTTGACAAAATCACCAGTTTGAAGGTGTGAATTATATAC
TCTCGACCATATATACCTAATAGCCGGGGGCCCGCTAATTAATTTTTCGA
AAAAGTTCCCTCTTTTGCCCTAAGGCTGGGCTTAGTTTGCCGTCACCTGA
CCCTAGATTTTGGAGGTGGGTCGGTCTGTCAGAATTTTTTTTATTTTGGC
GATTTATGAAATTTTCGTCCATGGAAGGGTTAACAGTTTCTTTACATTTA
GGTAATTTTGAATAAATAACAGAAGTGCTACAATCAGGGTCATAATATAT
TGGCACTTTTGGCTAATTTTCAATTTTTCGAAAAATTGAAGTTCGAGCGA
GAATGTCAATTTTTAGGCCTTCAACTTGATTTCATCGAGTATTTCGATCT
GGGAGGGATTTATTGGTTTCTAGGCTTNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNACCCTTCGAACCTACTTTAGAGCACTTACAAATCGATTGTGGT
TTCAAAACACCCCGGTGAATTTCCCTTTTGTGCCAAGTATTTTGTCCCTG
ATTGTAGCAGGGAATTTACAATACTTATGCTTGAGACAAAAAAGATACGA
GTTTTGACTTTTTATTGTTTGAAGTTTTTGAAGGAAAAAAAATCTTCTTT
AAAAGAGCAATAAAATTTTTTGGGTCGGTAGGTTTTGAGTTAGGGTCAGT
CGGGTGACGGCAAACCAACAATTTCAGTCCAAGTCCAGCCTAATTCTGCT
GTAATAGCCTCCTTTTCGAAAATTTTCCACCCAGGACATTTTTATTCCAT
CCCCCCCGTCTATTAAGTTTTGGGATTTTTTCCAAACCCCTTGCTTATTC
TAAACCTCCCGGCTATTCCAAACCCCCCGGCTATTAGGTACCAGAGAGTA
GCAAATTTTTGCTTGGGATAGAAGTTAAAGGTACGTGCACACAATGTAGG
AAAACTGCTTCGCTCATAAATTTGCTTCGCAAAAATTGACAATGTTTACA
TTCCTCTAACCTTCCACAATACTAAAGTGCGCATTTTTACCTACCGCCTT
TATGATGGAAGATGGTGGAGATAGCCAGACTCCTAAACAGTGTATTCTCT
CGAGGTAGCGCCTCGTTTGTAAGGCCTTGATTACACAATAAATTAAAAAT
GATTCTGCACATGTAAATGGGTCGTTGTATGAGCTTTGGCAAAATTTCCG
GCAGGAAGTAGCCTGCACAGTGGTGTGCAGATCTAGGTGGTTTTCTTCTC
TCATTCATAGATCTTTTTCTTGGAAAGTTCGTTGTTTTTCAAATTAGTTT
TTGAGGTGGCTTGTTGGTAGCCTGGAGATCCATGCTATGATTTCTTAAAT
TCTATATACTGATGGCGAAATATATAGCATGGTATGGGCTGATAGTTTGA
ATTTCCCAGATCCTAATAAGGGTTGAAAACATAGCCAATCAAATTTCGTT
ATTCTTTTACTGGTCACACTTTCTTAGAGAAAGCGCAAGTTCCGAAATTT
GGTTTTTATTTTAGTACCTTATAGTTGGGTATAAATTTTCGCGGGATTTT
ATTTCACGAATGTTCGCGAATTTTGCCTTTTTCGTGAAATATAATCCCTC
GCAGAAATTTTCAAACTCTCATCTCTCGCTTAATTTGCGAAATTTAATCC
TCACAAAAATCAAGTTTTTACGCAAAAAACCGTTTGATGTCCTTTCAGGT
AAGAAACTCTCTTAAATGAGTCTCCATTACTCGAATGTCTCTATAATTCA
AATAAATTTTCATTCCTCGTAGTTCTTCGAGTTATGAAAACTCTACTGTA
CACACAAGATTTCGTAATTAAACTAACAAAAAATGTAAAAGATTCGCCAA
TTTGCGAAAAACATAGTCGTCTAAGAAAACAGCTATTTTTTTTAGAATCT
TCCTTACAATCTAGTTTTTCTATTTATAAAAAGTAGATTGCTGACTTGTG
GAAAGGAATTTCGGCATGACTGATCCTTGTGTTTCAATAATAACATCAAA
GCGGGAATTAATTTTCTTCTCCTTTCTTTCTTTTCTTTTTCTTTCTTATA
AGTTAACGCTTTCCCTCGCCACTCTCAAAGCGTGGTTAGCTCAAGCGGTT
AGATCGTCTGTCTGCATGGGGCTTCGAGTTCGATTCCGATGGGTGTCCAA
TTTTTCAATTCTTCAATTTTCTTTTTTTAATTCTCTTTCTTTTATAATGA
AGGTCAATCAAACAAGTAACTAGCATATATTACCGCTCTCTGTCTAAGGT
TTAGATAAGCTATGATAGCATCACTTAATAAGAACTTCTTAAAGTTTACC
ACAAGCGATTATTCAAGGCTGAGATATAGAAGAGCGGGTATAGGCGTTTG
CGTCTGTGTTTGCTGACTGACAGTTTCACTTTCACTTTCAGCCAGCGAGT
GAGCAAGCGATTCTTTGTAAGAGAATCATCAAATAACTTCTTTCAGAATC
ATTGAACTTCTCGTTTTATGGTACTTTAAAGGCAGAATAATAATTGATTT
CCCTGTCAAAATGTTTGGCACTTGATCCAATCGTTTGCTTATCTTTCTTG
CGTGGTCGTTATTTGAATTTTAGTATTCAATGCTTGTAAAATAAGGTTGT
TATAAGAGTATTAAACTCCTCACTAGGAGGGAACAGATCATAGATTCGAA
TTGAACGCGTAATTCCCAATAGCAATTAACATTGCATAACGCGTCGAGAT
ATCTCTTCACTCTAATGAAAATGTGATACAAAATTAAAGTGACGAGAGAA
TCACAAAAAAATCAAGAATTGAAAAAATTGGACCTCCATTGGAATCGAAC
TCAAAGCCCCATGCATATGAGACAGACGATCTAACCGCTTGAGCTAACCA
CGCTTTGATTGTGATAGGGGGAGAAAGCGTAAACTGATAAGAAAGAAAAA
GGAAAGAAAGAATCGAGAAGAAAATTAATTCTCCCTTTGATGTTATTATC
GAAACAAAAGGATCAGTCATGCCGAAATTCCTTTCCACACGTCAGCAATC
TACTTTTTATAAATAGAAAAACTAGATTGTAACTGTAAGGAAGATTCTAA
AAAAAGATAGCTGTTTTCTTAGACAACTACGTTGAAATTAAATCTTCGCG
AAAATTTACAGTAGAGGTTAGTCGCGAAAATAAAATTATTTCGCGAGGGA
GGCTGTCTCGCAAAAATTAGTTGCCGCAAATTTCTGCAAAATTCGAATTT
CCCACTGTAATTTTTAAGGCAGAGATCTGCCTCACAGGTCATACCAGTCC
TTTATACATCAGATTCTAAAAATACAGGATGGGTCTGCTGTCTAGCTTGT
TGGTTCAATTTTTTTCATCTATGACTTTTAAAATTTAGGTAATTTCTCAT
ACTTTTATCTAGTGTTAATTTTATTAAAAAGCGTTGGTTTATTTTTTCAT
AAATCCAGAAGTTTTGCAGCGCATTTTTTTGCTCACAAGTCAAGCCTCCA
CAGGGGGGCAGCGGACTATAACTGAAACCATCCATTCACTGACCAAAAGT
GTAATTACACAAAATTATTGCGAAAGTGAACGCATTTTAAGACATATGTT
TGGGAGATTTAATTTGGTGGATTTGGCGGATCTGTCTGAAAGCCAACAAA
TTAAGTTTTTTCAGCCATCCGCCAAATTAAATTCCCGCAAAATTTAGTTT
TTTTCTTTTTATGTCCGATTATTCACAATTTAACCACAATATCAATGTTT
TCACCCTGAATTTGGATTTTAAAATCCATCATCTGCCAAATTTATTAGAT
TCTTGCCAAAATTAGCTTTTTCCCTGATCCGCCAAATTAAATTCCCTACG
AAAAAACTTTTTCAGTCATCCACCAAATTGAATTGCAACCAAAATTTCTT
CCCTTAAGGTAGTTTGGAAATCACACAGAAAACACTACAATAGGTTCAAT
TTTTACAACAAAACACTTAACAGTTTAAACCCTTCATAAACCTTTAACAA
TATTGCATTAAAATCAATTGATATAATCCATACACCTAACTCTTAGAGCT
TCAAGTTTTTTGTGAGACTCATTCTAAGGGCACTTTAATCAGATTGAATT
GATCCGTGGGTATTAATCTTGGTAATTTCCACAAATTTTGGCCATATCAT
TATGAAAAATGGAAAATAAAGAAAGTAAAAATAGGCGGGTTTCAAGTTTT
AGATCCACACAACATTTTAGATTCTCAGTTCGCCTAAAAAAGGTCTCCTA
AAAATTTGTTCACCTACATAAGCATATAACATCAGTTTGGAATTAGCTTA
AATACCCTTTTTATACGTGTTGTTCAACCTCGAATAAAGCTATGAATTTT
TTGAAATATTATAGTTAAGGAGCTGATCAAAATAGCATGGAAGGTCCACC
TGCTGATGGCGATTGTTCATTTGGACCATGGCAAATTTCCTCAAGGAGAA
GTCCAATTCTAAAATCGAATGAAGCTGAAAGTTTGGAAAAGGAGCTTGGT
ATCCCTTTACCAGAGATGTTGTTTGGTGATACTAATCTGACAATTCACAA
TAAAGAACATGATTTTAAAATTGTTTTTTGTGCAAAAGATGCTCTCAAAT
TGGTTGATAATGAAAAAGATTTGATGAAAGTTGCAGTAGCTGAAGCATGG
CAGGAATCTAGAAAGGATTGTGAATATATTAAGAATGTGATTCGACCCTT
TGATTGGACTTACACAACAGCTTATAAAGGAACTATTGTTAATGATACAA
ATGTCACTGAGAAAATGACAGAGGAGCGAATTGATGTCGAGAAATTGAAG
AAGAAAGAAAGAATTCATTTTTATACTGATCTCATTCTATTTGAAGATGA
ACTTGGCGACAATGGTATATCCAAAATGAATGTCAAAATGAGAGTGATGC
CATTAAGTTTCTTTGTTCTTTTACGATTTTTCCTGAGAGTTGATGATGTT
TTAATCAGGATTTACGATACAAGAATTTTCNCAATATTGCATTAAAATCA
ATTGATATAATCCATACACCTAACTCTTAGAGCTTCAAGTTTTTTGTGAG
ACTCATTCTAAGGGCACTTTAATCAGATTGAATTGATCCGTGGGTATTAA
TCTTGGTAATTTCCACAAATTTTGGCCATATCATTATGAAAAATGGAAAA
TAAAGAAAGTAAAAATAGGCGGGTTTCAAGTTTTAGATCCACACAACATT
TTAGATTCTCAGTTCGCCTAAAAAAGGTCTCCTAAAAATTTGTTCACCTA
CATAAGCATATAACATCAGTTTGGAATTAGCTTAAATACCCTTTTTATAC
GTGTTGTTCAACCTCGAATAAAGCTATGAATTTTTTGAAATATTATAGTT
AAGGAGCTGATCAAAATAGCATGGAAGGTCCACCTGCTGATGGCGATTGT
TCATTTGGACCATGGCAAATTTCCTCAAGGAGAAGTCCAATTCTAAAATC
GAATGAAGCTGAAAGTTTGGAAAAGGAGCTTGGTATCCCTTTACCAGAGA
TGTTGTTTGGTGACACTAATCTGACAATTCACAATAAAGAACATGATTTT
AAAATTGTTTTTTGTGCAAAAGATGCTCTCAAATTGGTTGATAATGAAAA
AGATTTGATGAAAGTTGCAGTAGCTGAAGCATGGCAGGAATCTAGAAAGG
ATTGTGAATATATTAAGAATGTGATTCGACCCTTTGATTGGACTTACACA
ACAGCTTATAAAGGAACTATTGTTAATGATACAAATGTCACTGAGAAAAT
GACAGAGGAGCGAATTGATGTCGAGAAATTGAAGAAGAAAGAAAGAATTC
ATTTTTATACTGATCTCATTCTATTTGAAGATGAACTTGGCGACAATGGT
ATATCCAAAATGAATGTCAAAATGAGAGTGATGCCATTAAGTTTCTTTGT
TCTTTTACGATTTTTCCTGAGAGTTGATGATGTTTTAATCAGGATTTACG
ATACAAGAATTTTTCATGAAGCAGGAACAAACTATATTCTACGTGAATAC
AGTGCTAAGGAAAAGAAGATCAAAGATCTGAGGAATCCGTTAGCAGACGA
AAACATACTTGTCGATGATCTTGATTGTATTCATGAAGAATTTGCAAAAA
TCATCTTTGAGCCTTCTGTGGAGAGATGATGCAACATATTATAGCATTTA
CGTTTATCTTCACATAAAGAAAATTATAGGCGTTACGATTTTATCATTGC
AGTCATTTGAAAATTTGCATTGAAAGAAAGATTCTTAAAAGGATCTTCCA
ATAATTTGCATCCCTTTTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00071720-exon-scaffold_63-1575043694:301842..301987 | TCONS_00071720-exon-scaffold_63-1575043694:301842..301987 | Clytia hemisphaerica | exon |
| TCONS_00071720-exon-scaffold_63-1575043694:288218..289139 | TCONS_00071720-exon-scaffold_63-1575043694:288218..289139 | Clytia hemisphaerica | exon |
| TCONS_00071720-exon-scaffold_63-1510915933:301842..301987 | TCONS_00071720-exon-scaffold_63-1510915933:301842..301987 | Clytia hemisphaerica | exon |
| TCONS_00071720-exon-scaffold_63-1510915933:288218..289139 | TCONS_00071720-exon-scaffold_63-1510915933:288218..289139 | Clytia hemisphaerica | exon |
| TCONS_00071720-exon-scaffold_63-1491911889:301842..301987 | TCONS_00071720-exon-scaffold_63-1491911889:301842..301987 | Clytia hemisphaerica | exon |
| TCONS_00071720-exon-scaffold_63-1491911889:288218..289139 | TCONS_00071720-exon-scaffold_63-1491911889:288218..289139 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_63 | supercontig | scaffold_63:288218..301987 - |
Blast
BLAST of TCONS_00071720 vs. Swiss-Prot (Human)
Match: TIPRL (TIP41-like protein OS=Homo sapiens GN=TIPRL PE=1 SV=2) HSP 1 Score: 194.897 bits (494), Expect = 6.645e-59 Identity = 111/214 (51.87%), Postives = 157/214 (73.36%), Query Frame = 1
Query: 193 DCSFGPWQISSRRSPILKSNEAESLEKELGIP-LPEMLFGDTNLTIHNKEHDFKIVFCAKDALKLVDNEKDLMKVAVAEAWQESRKDCEYIKNVIRPFDWTYTTAYKGTIVNDT-NVTEKMTEERIDVEKLKKKERIHFYTDLILFEDELGDNGISKMNVKMRVMPLSXXXXXXXXXXXXXXXIRIYDTRIFHEAGTNYILREYSAKEKKIKDL 828
D FGPW++++ ++ I+KS + E L EL +P LPEM+FGD L I + F I F A DAL+ V+N + ++KVA AE WQESR + E+ K VI+P+DWTYTT YKGT++ ++ + T + ID EKLK +E+I F+ +++LFEDEL D+G+S ++VK+RVMP SFF+LLRFFLR+D VLIR+ DTR++HEA Y+LREY+++E KI L
Sbjct: 12 DFCFGPWKLTASKTHIMKSADVEKLADELHMPSLPEMMFGDNVLRIQHGS-GFGIEFNATDALRCVNNYQGMLKVACAEEWQESRTEGEHSKEVIKPYDWTYTTDYKGTLLGESLKLKVVPTTDHIDTEKLKAREQIKFFEEVLLFEDELHDHGVSSLSVKIRVMPSSFFLLLRFFLRIDGVLIRMNDTRLYHEADKTYMLREYTSRESKISSL 224
The following BLAST results are available for this feature:
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