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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071707 ID=TCONS_00071707|Name=TCONS_00071707|organism=Clytia hemisphaerica|type=transcript|length=1415bp
TGCTTAATGGAAggtataaagtttttttttctcaaaatggctTATTTTTT
AAAATCTAGATTTTGAACTCGTAAGTGAAAACACATTTTCTATgttatga
tagctcaaaattcaaggaGCCTTTCCTTTCTCCAACAGTGAAAAGTAACG
ATGTAACTTTCCCAAAAATCTCAATTCAATCCAGTTTTGTTTTGAGCTAC
CCGGTAGTAAATCTGTCGGGAAAgaaaaaagtataaaaattggATTCAAT
AACAAAttgtttaaaacaataaaaaatcaataataaaGTTAGTGGGAAAT
AAATTCATTAAGATAGGTAAAAAAGTTATAATTTTTAATTACTAAAATCA
TTACACAGAATAAAGGCAAACagaagttatcaaaaatataatcaaacTAA
TTTTAAAATCATCATTACAtcgattttcatttaaaattttggtataaaac
ttttccaacaaaaattaaaatctatgCTAACCCTTCTTGTTTACAGTATA
GCCctacaatattttttttctataaaaataattttatacactatgaaaaa
aaattaaaagtgctTTTGTTAAATACAGTAACTGCCAAACGCATTCATTA
ATGAAACTTTTACGCATATTATAAATTATGTAAACCACTAAAACTGTTTA
TAACAATATCATTTTTATCAAGGTCCAAGACCATTAATTActattttaag
catttttgtATGATTATCCACGATTAAATCTTCATTACTGATTACCTATT
GCAATACCAGGTGAAGCATGTTTCAGGCTTCCAAGTTTTACGTGCATCAC
TCGCCATAGAGAACTTAAGGAATCAAAACAACCGATGATTAAAAGCTTTT
CCACCAATTACTTCTTTTTTTGACATTATTATAAAACAtgtaatgatttt
tctttcgaCTGAAACTCTATATTTTTCTGGCATACAATACATTGCAAGGC
ATTAAGTTTACACGTGAGAAAGAGCCTTTTCATGTGCTTGATTTAAAGCA
CGGTGCACATCAACGCAAAACTTCTCTCAGGATACATAACAATAACTAAT
TGAAAACTGAGCATCAATGACATCAAGATTTGCTATCTTTGACAAGAGTT
GCAATCGTAGAGGGCAGAGAAGCGAGGCGTAAAAATGGATGTTGTAGAAG
CTCGAAAGCTGATGAGCGCCTGAAAGGATCTTTTTGTAGACAAGCCTCAA
TGAATGTTTTCAGTTTTGGCGAAACCTAAAGAGATACAAGAGAGTGAGTG
AATAAAAagataaacaagtgatacttttatggacctacctggttatgcat
ttaacacatatataattgatatctacgtgacgtgaccattaaacaatcat
tcagaacacaaatagttaCGATCTAtttaaattagtcgtttgtttcttat
aaaaaaacgtttaga Run BLAST on NCBI transcript from alignment at scaffold_63:221470..222952- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071707 ID=TCONS_00071707|Name=TCONS_00071707|organism=Clytia hemisphaerica|type=transcript|length=1483bp|location=Sequence derived from alignment at scaffold_63:221470..222952- (Clytia hemisphaerica)
TGCTTAATGGAAGGTATAAAGTTTTTTTTTCTCAAAATGGCTTATTTTTT
AAAATCTAGATTTTGAACTCGTAAGTGAAAACACATTTTCTATGTTATGA
TAGCTCAAAATTCAAGGAGCCTTTCCTTTCTCCAACAGTGAAAAGTAACG
ATGTAACTTTCCCAAAAATCTCAATTCAATCCAGTTTTGTTTTGAGCTAC
CCGGTAGTAAATCTGTCGGGAAAGTTANCCCAAAAATCTCAATTCAATCC
AGTTTTGTTTTGAGCTACTCGGTATTAAATCTGTCAGGAAGGAAAAAAGT
ATAAAAATTGGATTCAATAACAAATTGTTTAAAACAATAAAAAATCAATA
ATAAAGTTAGTGGGAAATAAATTCATTAAGATAGGTAAAAAAGTTATAAT
TTTTAATTACTAAAATCATTACACAGAATAAAGGCAAACAGAAGTTATCA
AAAATATAATCAAACTAATTTTAAAATCATCATTACATCGATTTTCATTT
AAAATTTTGGTATAAAACTTTTCCAACAAAAATTAAAATCTATGCTAACC
CTTCTTGTTTACAGTATAGCCCTACAATATTTTTTTTCTATAAAAATAAT
TTTATACACTATGAAAAAAAATTAAAAGTGCTTTTGTTAAATACAGTAAC
TGCCAAACGCATTCATTAATGAAACTTTTACGCATATTATAAATTATGTA
AACCACTAAAACTGTTTATAACAATATCATTTTTATCAAGGTCCAAGACC
ATTAATTACTATTTTAAGCATTTTTGTATGATTATCCACGATTAAATCTT
CATTACTGATTACCTATTGCAATACCAGGTGAAGCATGTTTCAGGCTTCC
AAGTTTTACGTGCATCACTCGCCATAGAGAACTTAAGGAATCAAAACAAC
CGATGATTAAAAGCTTTTCCACCAATTACTTCTTTTTTTGACATTATTAT
AAAACATGTAATGATTTTTCTTTCGACTGAAACTCTATATTTTTCTGGCA
TACAATACATTGCAAGGCATTAAGTTTACACGTGAGAAAGAGCCTTTTCA
TGTGCTTGATTTAAAGCACGGTGCACATCAACGCAAAACTTCTCTCAGGA
TACATAACAATAACTAATTGAAAACTGAGCATCAATGACATCAAGATTTG
CTATCTTTGACAAGAGTTGCAATCGTAGAGGGCAGAGAAGCGAGGCGTAA
AAATGGATGTTGTAGAAGCTCGAAAGCTGATGAGCGCCTGAAAGGATCTT
TTTGTAGACAAGCCTCAATGAATGTTTTCAGTTTTGGCGAAACCTAAAGA
GATACAAGAGAGTGAGTGAATAAAAAGATAAACAAGTGATACTTTTATGG
ACCTACCTGGTTATGCATTTAACACATATATAATTGATATCTACGTGACG
TGACCATTAAACAATCATTCAGAACACAAATAGTTACGATCTATTTAAAT
TAGTCGTTTGTTTCTTATAAAAAAACGTTTAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00071707-exon-scaffold_63-1575043694:222730..222952 | TCONS_00071707-exon-scaffold_63-1575043694:222730..222952 | Clytia hemisphaerica | exon |
| TCONS_00071707-exon-scaffold_63-1575043694:221470..222661 | TCONS_00071707-exon-scaffold_63-1575043694:221470..222661 | Clytia hemisphaerica | exon |
| TCONS_00071707-exon-scaffold_63-1510915933:222730..222952 | TCONS_00071707-exon-scaffold_63-1510915933:222730..222952 | Clytia hemisphaerica | exon |
| TCONS_00071707-exon-scaffold_63-1510915933:221470..222661 | TCONS_00071707-exon-scaffold_63-1510915933:221470..222661 | Clytia hemisphaerica | exon |
| TCONS_00071707-exon-scaffold_63-1491911889:222730..222952 | TCONS_00071707-exon-scaffold_63-1491911889:222730..222952 | Clytia hemisphaerica | exon |
| TCONS_00071707-exon-scaffold_63-1491911889:221470..222661 | TCONS_00071707-exon-scaffold_63-1491911889:221470..222661 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_63 | supercontig | scaffold_63:221470..222952 - |
Blast
The following BLAST results are available for this feature:
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