TCONS_00071705 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071705
Unique NameTCONS_00071705
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1084

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071705 ID=TCONS_00071705|Name=TCONS_00071705|organism=Clytia hemisphaerica|type=transcript|length=1084bp
TTAGAAAGTAAGCCATGTGTCATAGTTGAGCGTCTCGATTCTCTCAATGT
AATGACCATTGGAATCAACCGTCCACAGAAACGAAATTGTGTTAACATTG
AGACAGCTGGGCTATTAATCAGTGCAtttaaagaatttgaaaaagatgAT
CAAATTCACTGTGCTGTTTTGCATGGCTTTGGAGGATTCTTTTGTGGTGG
GTATGATTTAGAAGAACTGTCGGAGACCCCAGAAAAAGATAGGCAAAAGA
AGATATCAACTATAATTTTTGGTGATGGACCAATGGGTCCAACACGTATG
GCACTGACAAAGCCTTTAATAGCAGCTGTATCAGGATATGCTGTCGCTGG
AGGACTGGAACTAGCCTCAATGTGTGATATGCGAGTTGTAGAAGAAAATG
CTCAATTTGGTGTACTTTGCAGGCGGTTTGGTGTCCCTCTGATTGACGGT
GGTACTGTTAGATTGCCGAAGCTGATTGGTCTGTCAAGAGCAATGGATAT
GATTCTGACTGGTCGATTAGTTGGTGCCGAAGAAGCCCTTGCTTTTGGAC
TTGCCAATAGAGTTGTCAAGAAAGGTACAGCATTAAATGAAGCAATATCT
TTGGCAAAGGAGATTTCAAAATCTCCTCAAGGCTGTTTACGTGCAGATCG
GCAATCAGCGTTGTATTCGAGTTATGAAGCCAACGATATTGACGatgctt
tttgttttgaagttgaaaatgCTGCACATGTCATTTCTGAGaaacttgTC
CGGGAATCATGAACTGAACTATATATTTACAAAGAATAGTTCCAACAAAA
GGATGCGTCACAATACCTTTGGTGGGTTAAACCCGAAAATGACTTCAAAT
TTGAAGATTCGAAAAGTATAAAAAAGCACAATATCGgtATCATATTTCAT
GAAATTCATGCGAGCCCTTTACCGTTGGATGGAACAGAAAATTGCGATTG
GGGACAGATTATTCCGACTGAAATGGAGATTATCGAAGAAATTTACATAT
TGGTAGCAAAACCTTTTTGGACTGAAACAATCAACAAACTTGATaaacag
GAAATCAAAAGGACTTCCACCGATATCATTTTTC
Run BLAST on NCBI

protein sequence of TCONS_00071705-protein

>TCONS_00071705-protein ID=TCONS_00071705-protein|Name=TCONS_00071705-protein|organism=Clytia hemisphaerica|type=polypeptide|length=253bp
LESKPCVIVERLDSLNVMTIGINRPQKRNCVNIETAGLLISAFKEFEKDD
QIHCAVLHGFGGFFCGGYDLEELSETPEKDRQKKISTIIFGDGPMGPTRM
ALTKPLIAAVSGYAVAGGLELASMCDMRVVEENAQFGVLCRRFGVPLIDG
GTVRLPKLIGLSRAMDMILTGRLVGAEEALAFGLANRVVKKGTALNEAIS
LAKEISKSPQGCLRADRQSALYSSYEANDIDDAFCFEVENAAHVISEKLV
RES
Run BLAST on NCBI

transcript from alignment at scaffold_63:128107..140733-

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071705 ID=TCONS_00071705|Name=TCONS_00071705|organism=Clytia hemisphaerica|type=transcript|length=12627bp|location=Sequence derived from alignment at scaffold_63:128107..140733- (Clytia hemisphaerica)
TTAGAAAGTAAGCCATGTGTCATAGTTGAGCGTCTCGATTCTCTCAATGT
AATGACCATTGGAATCAACCGTCCACAGAAACGAAATTGTGTTAACATTG
AGACAGCTGGGCTATTAATCAGTGCATTTAAAGAATTTGAAAAAGATGAT
CAAATTCACTGTGCTGTTTTGCATGGCTTTGGAGGATTCTTTTGTGGTGG
GTATGATTTAGAAGAACTGTCGGAGACCCCAGAAAAAGATAGGCAAAAGA
AGATATCAACTATAATTTTTGGTGATGGACCAATGGTAGTTTTTACAGTT
TTTATAATTTAGAAAAAATAGCTTACTGACGTGTGATTTGGCATTAATTT
GAAATTAATTCGATCTTTTATAAATGTTCTGTCAGGCTCTTCCATTATCA
AAGTGCTTAAAATTATTATTATTAGTAAATAAATCATCTTTCAAATATTT
GAAATTTCGATTTGTAAAAAGATTCAGAATAGATTCTAGACAATATAAAC
ATGTTCTGGCTTTTAGGGTCCAACACGTATGGCACTGACAAAGCCTTTAA
TAGCAGCTGTATCAGGATATGCTGTCGCTGGAGGACTGGAACTAGCCTCA
ATGTGTGATATGCGAGTTGTAGAAGAAAATGCTCAATTTGGTGTACTTTG
CAGGCGGTTTGGTGTCCCTCTGATTGACGGTGGTACTGTTAGATTGCCGA
AGCTGATTGGTCTGTCAAGAGCAATGGATATGATTCTGACTGGTCGATTA
GTTGGTGCCGAAGAAGCCCTTGCTTTTGGACTTGCCAATAGAGTTGTCAA
GAAAGGTACAGGTGGGTAGGTTTATGACTTCAACTATCGAGATGTTTATT
GTTCTCGAAGCCTTTTTGCTATTTACGTTGGCGTTTTGTTAGCAAATATT
TGAAGAAGGATTATAAATCTATGAGTCTAGGTAATGTTCTAGTTGGTGAG
TTGGGAAGTTGCTAGTTTCGAGTTGGGGAGTTCGTAAAACGTTACGGCGA
CCAAAAATTTTCTAATTTAAACTAATGTAATGTAGCCCAAAAGTACAAAT
TTCAAATAAGCCAGTACCAAACATGTTATTGCTTTTAAGATCATGAAAAT
GGTAAGGTGCTGGCTAGCAAAACCAAAATACTTAGTACTGTTATGTCGAG
GTTATGCCATTGCCATAATGCTGACAACATGACACGTTATTGTAAAAGTA
TTAACAAAATCTTTAAATACAATGATTGTCAAACAAATTCCCTAAAAAAT
ATTGATCATACTGCAAGTGATGCTTATTGTATAAAAGGATATAAGTTGGC
AGTCATCTTAGCCTAAAAAAATTCGTAGAGAAAGCTTATAGAACTAGAAA
AATAATGACACTTTCTTTTGTCATTTTATCATTGGAATTGACACTTTTTA
ATAAAAATTTTANAGAAAGCCTATTGAGCTAGAAAAATAATGACACTTTC
TTTTGTCATTTTATCACTGGAATTGACACTTTTTAATAAAAATTTTGATC
ATATTATGGTTCCAAAGTCACTTTCATCAAGAATTATATTTATACTCAAT
GTGATGCAGGAAATATAAATGGATATGAATTGACAGTAGAAAATAGCTTT
CCATGCTCTCAGCGCACGTGTTTAAGGCAAATAAGCATATAACAGGTGGT
ATATGTACTATACGTATTATATGTGTTATATATTACTCTCATATTACATT
TACTTTCAAAATCGTACTTTTGATGTAAGTTATTCTTTTTCGGTAGCCGG
TAATTTTTTAACTCCCCAACTCGAAACTAGCAACTCCCTAACTCGCGATT
AGGAATACTTTCCAAACTCTAAATCTATATATGAATAGTTAAAGAGATTA
AAAATATGATGCTGATGGTGCCAATGCTAGGCAATAGAGAATATATACTG
TATTGGAATTATCTTGGCAAAATATAAATGTAACTTTCCTAATAGCATAG
AATTAAAGTGAATTTTTCTAATCATTTTGTTCAGCATTAAATGAAGCAAT
ATCTTTGGCAAAGGAGATTTCAAAATCTCCTCAAGGCTGTTTACGTGCAG
ATCGGCAATCAGCGTTGTATTCGAGTTATGAAGCCAACGATATTGACGAT
GCTTTTTGTTTTGAAGTTGAAAATGCTGCACATGTCATTTCTGAGGTAAA
TATAACAGATTACTTTATATTGAATTTAATTCAATTTTAGATGCATGTCT
ATATAATTTATTTCTTTGGAAGGAAGAGATTTTAATTTGAAATTGGCCCG
AAATTGTTTTCTGAAAGGTTTGAATTTGGCTAAATCTGCCAGATTTTTTA
CCTTTACAATCTTACCAGATTGGAGACAGATTGGAGTTGTTTTTTTTTCA
ATATTTCCCAGTGTCAAACAGTTTGCATTGCTGGTTTACGTTTGTCTGCC
ATTAATTTATGATTGAGTAGTGTGTTGTTTTCAATTTTGGAGAGAAATTT
ATTTAATGAATGAATTCTGCCTCTCCGAAAGGATCTACAATAAAGTTGTT
TAGAAAAAATTCGTTATGTTAAGTCCGGAATTCCAAAGATCTCTTCTATC
CCGTTTGGTTGCTGAAATCTTTGCGGTCTTTCTTTCCATGCTTCCATGCT
TGAATTGGAGCACAGTTTTGGATTTGACGACGTCGGCTGGTAGATTATTT
CAAGGATCGATTGTTTGATGATAAAATTAATTGAACAGTGCACCTCTCAC
ACCATCTTTTGGGATTCGCTCAACGAGTTGAAGGTCGTGTTCATATCATG
GTTTCTTGTGGCACGCGTCTTGTGCTGAAAAGTTTTGTGTAGTGAAGATC
TATCATAGACATTGAAATGTTTATATATTTTAATCATGTCGTTCCGCTCT
CGTCTATATGCAAGCGTCGGAATAAACTAGCAAACTAGTCTGTTAATTAA
TCATGTCAGAGGGCGGGAACATAAAGGCGGCGGGTGTTTGCTAGAATAGG
AGCTGCGTAGGAGAACGAGCAAAAGTTGGTGAGAGGCTGCTGATTAACTG
CTGCTTTCAGCCCTTGCCGCCGACAAAATTTCTTCCTACGCTTACCTAAC
TCCTGCGCTCACTTTTCCCGCGTGATACCATTCCAGCCCAAATGGCGTGC
CAGTCTAGCGTCGGAAAATCGAGTCTGCGCAAATGTTCTTGGTGTTCTAA
GTTCTGGAAACCATCGATCAACTTACTCGCTCTCCTTTGAACATTTTCTA
CGGCTGTGGTATTTCTCTTCAAGTAAGGTGTCCAGACTGCTTGGCCATAT
TCAAGGTGAGGACGAACATGCTTTGTGTATAGCGTCTTGAACATATCTTT
ATTTAGGTAGGAGAAGCTTCTGCGAATCAAACCAACAATACGATTTGCCT
TCTTAACCTTGGTTGCGATGTGTGGTTCGAAAGATAGTAGCTCGTCAAAA
GTAGCCCCGACGTCTTTCTCTTCTTCCACATGTTCAAGTATTTTGCCATT
GAGGTTAAATGGATGTGCATGAACATGGAATTATTATAGACACTGGAAAA
ACAACGGGCTGATTTTTGCCAATTTCTCATGTGCGCAGTAATGACATTAT
TATTCACCCTCCTACCACCATTAAATGATTTTTTGTAGTATTTTAATTGC
ATTTCTCATCAAAATACACTTATCCAATTCCGAAATGAGACTTTAAAGTT
CTCCTCCGAGATTCAAACTCATCTAGTTAATTACTAATTATACGTCGTTA
TGGCGTTTTAAATTTCGAGATATAAGCAGATATAAGATGTATAAGAAATT
GAATATTGACACCAGAAATCTTTAAACTTCAACCTCCAAAAATCCACCGT
GCCACCACGTGCCACCAAAATATTTTCATATCACAGTGGAGCTATGAGAC
TCACGTCTAATATATGTCAGTCTCAGCTCTTTTCGGAGAAATATTGGAAA
GATAATCCCGATTCAAAATTTCGTGTCATTATAAGCATTTTGTCTGATTT
TACTCGTCTGATGATGTTTTCCTCACACTAGATTTCATAAATGTATTCGC
TTGGTATTCTAGTATTTATTTTCAAGCAAAAGTACGATCAGAAAAAGTAG
TATAAGAGTATTAATCATTTTTCAAAATCAGAGTCCTTCGAGCTGCCATG
ACAGTTGTCCTTTGCGGACAATGCCTGTACATTGATAGTTTTCTGAAACA
ATAGAAAAACAATACTTCGCTCTCCACCGTTTCATTCTATGTTTGTCCAG
AGTCTCTATAATAGCCATGGCATGAACGATGTTGCGGAATTTACCAAGTG
TTAATGCATGGCATTTTCGGGATGAAAGTTAATAGCCAGCTTTTTGACCA
TTCTTCCAATTTCTTTATATCCTGCTGAAGAAGCTCGGCGTCAAAGGCGC
TTCTTATCCTTTTGCAGAACTTAGTGTCATCAGCAAATAACAGCACGTTG
GATTTAACAGTTTCTGGGAGGTCGTTGATATATATAACAAACAGTAAAGG
GCCGAGTACACTGCCTTGTCGGACCACTTAACACATTTGAGGGTTGCAAT
TTCACACCATTGACGGTAACAGCTTGAGTACGTTGATTCAAGAAACTTCT
TATCCATTCCCATAATTTTCCGCTTATCCCATATGCTCTGACCTTCTTCA
TCAGACGACGGTGTGGAACGGTATCAAAGGCTTTCGCGAAATCAAAGTAG
ATGGTGTCGGTGACCTCGTTAGATGCCGTAGCGTCAGCACAATCTGTTAG
AAATCTAAGAAGTTGCGCAGTAGTCGATCTACCTGGTAGGAATCCGAATT
GTTCTTGTGCTTGAAGTTGTTTGTTGGTGAGATGCTCCATGATAACGTCT
TTAATGATTGATTACATCATTTTACAGACAATTGAAGTCAAACTTACTGG
GCGATAGTTTTGCATTGATTAGTTCATTATCATTGTTAATGGAGGAACAA
CTTCATCAGACAATTCTTTAAGTAATCATGAGTGGATTCTATCTGGACCG
CATGACTTATCAGCATCGAGTTTGAGAAGTTTTTTCATTACTGCTTGTTC
TGATATCTGTATGTCCGATACAGTGATGTTTGTTCTTAGATCAAATGGTT
GCAATTTATCGTCAGGCTCAATAGTAAAAACACTGGTGAATTGATCTTGT
AGTATTATCGGCTTTTTCAATATCATCGAACTTCATTGACGCTTTGTCTT
CTGGGTTTAGCAGGAGTGGAGAAACACCTGTTTTCGTTTTGAGTTTAGTA
CGAACATAAGACCAAAAAGACATTGGATTTTGTTTGGAGTTATCGATTAT
AGTTTTCTCCATCTTTCGTTTGGCTTTGCGCATCAGTGATTTGACCTTGT
TACTCGCTCTTGTATATGATCTTCTACGATCTTCGCTACTCTCATTCCTT
AGGTTCGATATCCAGCTCCTGTGAAGTCTCTTTTTGTCAAATAGTGTTAG
CAGATTTTTGTTTAGGAGCGTAAGGTAGAAAGCTCTCAGGCCCGAGATGG
GCTACTAAGAAATTGTGCCAAAAACATTTTTGGTACAGGTTATAAAATGG
GATGAGGGTTTGAAATTTTTGGATGAAAAATTGGTTTTCGCTGAAGTTCT
TCTTATAACTCCGGTTATAAGAGTGCGCTTTTAGTGATTCACTCAATTAA
GAATAAACTAAATTGAATAAATTAAGAAAATTTTGGCTCAGGCTGGGTTC
TACTTAATCTTTTGAAATTTTCAAGCTGAAATCCTCTCACGATGTTCTTA
TTACGTTTAGTTTCTTTACAAAAACTTAAGTAGGTTTGAAAGCTGTTAAA
ATCAGTAATTTTCTTAGTAATTTTCTGAAATCTGAAGCTCAGGAGGATTG
TTTTTTATTTTGCCCTTTGGTTTTGACCAATTTTCAGCGTCGTTTTCTTT
TAAAAAAAGCGTAAAATGTGTTACTGTACACACTACCATCCACCCAAAAA
AAGTAACTCCGTTTCTTTTATTTCAAGGAGTCCATTGAAGGAGCCAAAAA
ATTCGTTTCTGGTCAAGGAAAGCATGGGCAGTTCAATGTAGGTGATTTTA
ATTGAAAGAAAGATGATAATTAATTTTACTCTGATTCCTGATTGATAAAT
TGAAACGCGAATGTCAATCGTAAAAAGACAGGAAAAGGAAAGTTAAAAGT
TCTTAAAGCACTGCTGTATCATAGAGGCGATGGTTTTGATGGTCAGTATC
CAATGGAAGGAATAGTTCAAGAAATCGTTACCGTTGAGAAAAACTCTTGG
CATTTCATTTACCATTTGAAAACTACGAATCTCAACTAAGGATTGTTAGA
CATACTCCATACACTGGCATTTCATTTAACCTCGCTGGCTTTAACTGGGT
CAATAAAAAAACAGGGGTGAACAAAAGTTAAACAGAGCGCTGATTCACTG
TATGTACACACGTAAACACACTTCAAANAACAAAAGTTAAACAGAGCGCT
GGTTCACTGTATGTACACACGTAAACACACTTCAAAAAAAATCAGTGTTC
ATCCCAAGCGTTTTGATTTAGCATTTTTTGAAGTCATTATAAAGTTTATA
CACCACCTTCTCACAGACACGGTAGGATTTTCTCAGCCAGTGGGGATAAA
ATAACGGTCAGAAACTAAATGGGGATTGATATTCCCATATTTTTATGGCT
GGAAATTTCAATTCTTTTCTTTTGAAGTCNATAAAATAACGGTCAGAAAC
TAAATGGGGATTGATATTCCCATATTTTTATGGCTGGGAATTTCAATTAT
TTTATTTTCAAGTCAGAAAATTCAGTAGGGATGGGGATAAAAAGCATAAT
ATTTTACATTTAGGATTGGTTAATTTGATTATTTTCTACCGGGGACAATA
TTTTGGCCAATTTTTCCAGTGGGTCTGTGAGAAGGGGGTGTATAAACTTT
ATACTGACTTTGCTTCAAAAAATGCTTTAAAAAATGCTTGGGAGGAACAT
TGATTTGTTTTTTGAAATATTAAATGCTCTGTTCATAAAACTTTTTGCTA
ATGTTGCAACAAGAATATTCTTGGCTGGTTGCAATAAAAAAGACGAATTC
CTGGAATTTATGACGACGAGAATACGTAAAATGTACGTTGATCGAACAAA
TGATTATTATTCATACGTATGTTAAATTAAACTAATTTTATATTTGCACA
TTATCAAATTTTTTGTCATTATTTCGAAACTGCTTTTGTTTTTGAAAATA
TGTCAAATTTGTCTTTATTCCAGTAATTCCCCAGGATGTACGTGATTTAA
CTTTTTTTTCCTTGTAAGAATGTGTTTTTCCAGAAAAAAATTGAATATCG
GGGGTGGGGGATATAACATTTTTTAGAAATTTACCCCGTGGACATTGTGA
TTTTTGACCCCAGACGGACAGCAGGTCTGACCCCCCGGACAAGCATCAGT
TGACCCTCCGGACATTCAAAATAACCCTCAAACCGAGCAAAATTACCCCC
AAACAGAGTAAATTCCTGGGACCGGGAGAATTTTGTAGATTTTTCACTCT
CCCCGGACACTACATCCCCTATATAGGGACATATTCTGGAAGAGCCCAAT
GTGTTAATGCTCAAATTTCAGGGTGTGGTGAACAACATTTTATCAAGAGT
CACCAAATTAGCAAAGAATCATTATTTTCTTGTGTGCAAAAACGTTAGCC
ATACCATAATTGTCAATATATCGGCAATACATATCACATATAGATGTGCT
TTCCTGAAAGTGGAAGAATCTTCATCTAATCCCACTTTTAATTTTTTTTG
CTTACCTTTTCTTTTTCTTTTATATTTATATCGTCATTTCTTCACGTATT
CCTACGTACTAACATTCCTCATTTTTACAAATATATCACATACACATACA
GTTCCTACTTCTTTTCAAAACTCACTGAATGTCTTGACGAGAGACCGAAA
GCTGAAAAAGTGGGAGGGTGCTCTACTATCAAACTTTGGGATTTTTCCAG
CAGACTTGCGTGTGAACTGAAACCTAATTAAGGCGATTAAAATTGGCGAC
TATAAGTATTACCCTTCCTACCTCCAATTTGGTAAAAAATAATGGAGAAA
ATTAACACGTTTTCCAAATTCCTAGATTTTACAATTTTTAGATTTTAAAA
TTGATACGGGCTTATAGGTTATAGGCCTCGGGGTACTGGGGTTGGCAGAT
GAGGGGTATGTGCGGACCTCCAAAAACCGACCCTTAGAGGCACTGATTTT
TGCTGAAAAGGTGACCCTTAGAGAGACTTTTTTGAAAAATTTTCTACCCT
TAGAGAACCTTTTTACAATTTTTTCACTCTAAATCAAAAAAGATTCCTAA
AAATCGTGAATTTATATTTTTCTGATTTTTGCGTCCCTTAGAGAGACTTT
GAAAGGTGAAAAAACCGACCCTTGTATGTGTAGTGGATAGAGCGATGTCT
CTAAAAATGTTGAATAAGGGCTCATTTACGATTTTAAGAAGGTATTTTTA
TACTGTTAGAAATATGTGTAAGATGTATAATTTATGCATCATCGTGTAGC
TATGTAGTTTTACTATAATTTAATCGATATCTTATTCTTATCTTTTAATA
ACATCGCACCTTTCGAAAGTGTTTCCAATAGATTTCACTCTTATGGTTTT
ACCCTTAGGAACCCATATTTAAAGTTCTAGTCATTGATTTTTACTGTACT
TAACCTTTTAAGCAAAAAAAACATGAATTCTCATTTTAGCCATATTATTA
TTCTAAACTAATTAATAAGCATATTTTGCAAGTTTGTAACTATTATTAAG
TATTTAATCAAATTATGAACAAAAAGAAATTTGAAGTTTAACAGATTAAC
ATCAATTTCTAAGAATCGTTATCAATGACACTATATCATACACCGGAAAA
ATAGTATTACTTGCTAGGTCAACTGAAAGTAATTATCTTTATAATACATT
TATACTCCTGTCCGTTTTTACCGTATCAAATTCGCTTTTCGCTTGCTCCA
TGAAATCTCACCCAAGCAATGATTCCATAACTGTAATATTTGAATTTTTT
TAATGGCTAAGATTAAAAAGGCTGTAAATTATGGGAGTACTAGATTGACT
AAGGTATGAGGGAACCTTTTTATCTCGTCAACTCTACGAAAGGGTGAAAA
ACCCACCATTACAAATGACCCCTTCTCGATAATTCTCACACGAAATTATA
TATGCCTTGTGTTAATAACTTCATTGCTTATTATTATCCCAATATGACGA
AATCCTTGTAGACAAATATCATGGAGTCGAGACGATGGATCTCCTCTGTG
ATGCCATTAGTCACGATCACACTTGGCAATATATCTAAAAGTTAATTATC
GTAGTATTTACCCAAAACAAAGTCACTTCAACAAATATGATTGCAAGTCC
AACGGGCTTTAAAAAGACATCCGTTTCTATTAACTTCTAGAAATAGTTCT
GGCGGCAGTGTTCTTAGTCTTCTTGCTCATCCTCTAGCGAAAAATGTTTC
TTATAGGAAGTATATCTATAGAGGTCTGCGATTCAGATTACAGTGTTCTG
TTCTGTTCAAGAGTGTTCTTTTAATATCCGCTGCCAGCAGTAAGATAGAA
AATCCATTTTCTAAGATTTTGATTGCTTTTATTTTAGTCCATTTTTGGGG
GCCTGGGTCCATTAAAAATTTGAATTTTTTATCCATAAATTCTTATTCTG
ACCAATTTCCACGGGTCTAAAGATTTTTCTTGAATCATCGCATCAACGCA
ACACCGACAACAAAAATAGCACACTGTTCAACTCGTACACTCCTCTTTGA
ACTGTTTTTAGGCATCTACTGAGTAAATCTCAAAAGTTTTGGTGCTACCC
ATCACTCTGTCTTGATTTAAGCAAAAATTTTGATGCTTTTTTATTATTTT
CGACCTTTATTTAAGAGATTCGATGGCTTGCTCGTGATTCTAAGAGAAAA
TTTTGAGTAAGAAATCAGGAGCCACTACAGTTAAATGTTACCGGTACATT
TTTGCCTTAATGGCCTTCTATTTGGATCCGGGGGGGGTACTAGGGTTGCG
AGCTGACGACTTTCGACCCTCGGACCCTTACCGGGACTAAAAAGGAGAAA
ACNCCGCCCGACTTTCGACCCTCGGACCCTTACCGGGACTAAAAAGGAGA
AAACAAAGGAAAATTTTGTGAATTTTACGACCCTTACCGGGACAAATTTG
ACAAAATTTCGATCTTTTTGGGAGTAAAAAGTTGAAATTTTCCTATTTTT
TCTACCCTTAGTGGAATTGAAATTTGATTTTCTGATTTTTCCGACCCTTA
AGGGGACTTTGGAAATCCAAAAAAGGTACCCTTAAGGGTGGCACATACCG
TACCCTCCATTTGCCTAAGTACCCGGGCCCCCCCGGATTCGGATCAAGCT
GGAAGCTGGAACTCAGGACTATCAAGAAATAACTTTAGAAGTTTCAAGAT
GAGTATCTTTTTTATTTGCTGTTAAACGGTATGTTATTCGTGGTAAAAGG
TGTCTGTTTGAGTTTTGTAATACACCCCTGTCTCAGCCCTGGTGGAACTT
TTTACTTCAGTGGAGGTAAAAATTCCCATCGAAATCCCAATGGGGATAAA
AATTATATTGTTCCAAGGTTAAAAAATCCAGTGGGGATGGGTTTTGGAGT
TTTTGCCAAATTTTCCAGTGGGTTTGGGGTCCCAGCGGGTCTGTGACACA
GAGTGATGTANATTTTCCCACCGGGGACGAAGTTTTTGCTAAATTTTCCA
GTGGGTTTGGGGTCCCAGCGGGTCTGTGACACAGGAGTGATGTTATACGA
CTGCTGTAAACTTTAGTTAGACTCAAAACAATGTATGATTTATCTATAAA
GATATCAGCAGAGTGTTTTAAACTATATTCTTGCTTCCATAGCATCAATA
ATGATATCTAGATAATGATACCTATAACTCTTTGTAAAAATGTCTATTAA
GCTCTAGCTTTCATCTAAATACCTACAGTAAGTCAATTATACGGATTAAA
AAACAGGAAAATCAAATTTTAAAAGTCTAACAGTAGGATAAAGGGCGATT
AATCATAAAGAGATTGGTTAGGACAAAGTCGCCCCCCCCTCACTGAGTAC
TAGTTTTGTATAGTTGGANTCATAAAGAGATTGGTTAGGACAAAGTCGCC
CCCCCCCTCACTGAGTACTAGTTTTATATAGTTGGCCTGGTGTCAATAGG
GCGTCTGCAAAAAAGTAGTGGTTAATTAGGACAATTAAAAAAGGGTTTTT
TATAAACTTACCTTATTCACAAGGCCAAAAAAATTGTCAGTTTCGCTTAT
TGTCTCTATGCATTGTATAAGTAGTGACGATTACCCCCTCCCTCATCTGC
CTTTCTTAGAAAACAATGCGGGACTGATTGCATGTATTGCAGGGAATATG
ACTTAAAGAAAAAGAATTTTTACTATTTCAACGAATGTAGAAAATTGCTT
TTTATTTTTTTTAGAAACTTGTCCGGGAATCATGAACTGAACTATATATT
TACAAAGAATAGTTCCAACAAAAGGATGCGTCACAATACCTTTGGTGGGT
TAAACCCGAAAATGACTTCAAATTTGAAGATTCGAAAAGTATAAAAAAGC
ACAATATCGGTAAGGATTCATTTTAAAGTAAGGGTCAATAAATTAAAGCT
ACACACTAAACGATTAGAGAAGAATAAAGCAAAATAATGATTTTTGAGAG
ATTTTGGTTTCTTTTAGTTTTGTTACATTTAGGTAAGAATTTTCATCAGG
GATAGAGTCAATATTTTACTGGTTTGAATGAAATGTGAATGTACTGGTTG
AATGCATTGAGTTTTAAAGCCCGAAGGGCTAGAGTAGAATCTCTAACCTT
TCCCTGGAAGCCACTTATTCTCCATCCAAAACGCGCCGTAATCATGACGA
CGGATTGTATCTAGCGGTTTCTTTGTTTTTTGAGGACTATATCTTTTTAA
ATCTAGTGATAGATTTTACTTTCAATCCGGCGTTTGTGTAAAAACCACGC
GCGGGCGTTCTGAATGGGAAATAAGTGGCTTCGTTTCCCATCCAGGAGTC
TCGAGTCTAGCCCTTCGGGCTTGGAAGGCAATGGTTGAAGGCCGCCGATC
GAGCAGAAGATATATCAAAGCATTTGGTAATCCACTTAATTTTTCTATTT
TGCCTTTTTTAAGGTATCATATTTCATGAAATTCATGCGAGCCCTTTACC
GTTGGATGGAACAGAAAATTGCGATTGGGGACAGATTATTCCGACTGAAA
TGGAGATTATCGAAGAAATTTACATATTGGTAGCAAAACCTTTTTGGACT
GAAACAATCAACAAACTTGATGTAAGTTTCAAACTTTAAAGTCCAAAAAA
GATTCTTATCTCTTAAAGATCAAATCCGATAATTTTATAATCTGAACCGC
CTTTCAAAACTACTACTATTCAAAATCTTATGATCAGGGCTTATTCTATC
CCTATATCAGACTCGCTTAGCATTATATTTCTTAAACAACAGAGTCATTG
TTTAGGTACCAAAACTGGAGCCTACATATACTCATAAACGTAATTCTTAT
GGTAAAAAACATGTATTTAAAAGGGATAATACCCTTGCTTTAAGTACCTA
GAAGACGTAAAAATATTTTTGATATTATATATGAAACGATGAAAGTAAAT
GCCTACATTATCTTACACGCCTTTTTTTCTTTTTTAGAAACAGGAAATCA
AAAGGACTTCCACCGATATCATTTTTC

Coding sequence (CDS) from alignment at scaffold_63:128107..140733-

>TCONS_00071705 ID=TCONS_00071705|Name=TCONS_00071705|organism=Clytia hemisphaerica|type=CDS|length=3048bp|location=Sequence derived from alignment at scaffold_63:128107..140733- (Clytia hemisphaerica)
AAACTTGTCCGGGAATCATGACATTAAATGAAGCAATATCTTTGGCAAAG
GAGATTTCAAAATCTCCTCAAGGCTGTTTACGTGCAGATCGGCAATCAGC
GTTGTATTCGAGTTATGAAGCCAACGATATTGACGATGCTTTTTGTTTTG
AAGTTGAAAATGCTGCACATGTCATTTCTGAGGGTCCAACACGTATGGCA
CTGACAAAGCCTTTAATAGCAGCTGTATCAGGATATGCTGTCGCTGGAGG
ACTGGAACTAGCCTCAATGTGTGATATGCGAGTTGTAGAAGAAAATGCTC
AATTTGGTGTACTTTGCAGGCGGTTTGGTGTCCCTCTGATTGACGGTGGT
ACTGTTAGATTGCCGAAGCTGATTGGTCTGTCAAGAGCAATGGATATGAT
TCTGACTGGTCGATTAGTTGGTGCCGAAGAAGCCCTTGCTTTTGGACTTG
CCAATAGAGTTGTCAAGAAAGGTACAGTTAGAAAGTAAGCCATGTGTCAT
AGTTGAGCGTCTCGATTCTCTCAATGTAATGACCATTGGAATCAACCGTC
CACAGAAACGAAATTGTGTTAACATTGAGACAGCTGGGCTATTAATCAGT
GCATTTAAAGAATTTGAAAAAGATGATCAAATTCACTGTGCTGTTTTGCA
TGGCTTTGGAGGATTCTTTTGTGGTGGGTATGATTTAGAAGAACTGTCGG
AGACCCCAGAAAAAGATAGGCAAAAGAAGATATCAACTATAATTTTTGGT
GATGGACCAATGAAACTTGTCCGGGAATCATGACATTAAATGAAGCAATA
TCTTTGGCAAAGGAGATTTCAAAATCTCCTCAAGGCTGTTTACGTGCAGA
TCGGCAATCAGCGTTGTATTCGAGTTATGAAGCCAACGATATTGACGATG
CTTTTTGTTTTGAAGTTGAAAATGCTGCACATGTCATTTCTGAGGGTCCA
ACACGTATGGCACTGACAAAGCCTTTAATAGCAGCTGTATCAGGATATGC
TGTCGCTGGAGGACTGGAACTAGCCTCAATGTGTGATATGCGAGTTGTAG
AAGAAAATGCTCAATTTGGTGTACTTTGCAGGCGGTTTGGTGTCCCTCTG
ATTGACGGTGGTACTGTTAGATTGCCGAAGCTGATTGGTCTGTCAAGAGC
AATGGATATGATTCTGACTGGTCGATTAGTTGGTGCCGAAGAAGCCCTTG
CTTTTGGACTTGCCAATAGAGTTGTCAAGAAAGGTACAGTTAGAAAGTAA
GCCATGTGTCATAGTTGAGCGTCTCGATTCTCTCAATGTAATGACCATTG
GAATCAACCGTCCACAGAAACGAAATTGTGTTAACATTGAGACAGCTGGG
CTATTAATCAGTGCATTTAAAGAATTTGAAAAAGATGATCAAATTCACTG
TGCTGTTTTGCATGGCTTTGGAGGATTCTTTTGTGGTGGGTATGATTTAG
AAGAACTGTCGGAGACCCCAGAAAAAGATAGGCAAAAGAAGATATCAACT
ATAATTTTTGGTGATGGACCAATGAAACTTGTCCGGGAATCATGACATTA
AATGAAGCAATATCTTTGGCAAAGGAGATTTCAAAATCTCCTCAAGGCTG
TTTACGTGCAGATCGGCAATCAGCGTTGTATTCGAGTTATGAAGCCAACG
ATATTGACGATGCTTTTTGTTTTGAAGTTGAAAATGCTGCACATGTCATT
TCTGAGGGTCCAACACGTATGGCACTGACAAAGCCTTTAATAGCAGCTGT
ATCAGGATATGCTGTCGCTGGAGGACTGGAACTAGCCTCAATGTGTGATA
TGCGAGTTGTAGAAGAAAATGCTCAATTTGGTGTACTTTGCAGGCGGTTT
GGTGTCCCTCTGATTGACGGTGGTACTGTTAGATTGCCGAAGCTGATTGG
TCTGTCAAGAGCAATGGATATGATTCTGACTGGTCGATTAGTTGGTGCCG
AAGAAGCCCTTGCTTTTGGACTTGCCAATAGAGTTGTCAAGAAAGGTACA
GTTAGAAAGTAAGCCATGTGTCATAGTTGAGCGTCTCGATTCTCTCAATG
TAATGACCATTGGAATCAACCGTCCACAGAAACGAAATTGTGTTAACATT
GAGACAGCTGGGCTATTAATCAGTGCATTTAAAGAATTTGAAAAAGATGA
TCAAATTCACTGTGCTGTTTTGCATGGCTTTGGAGGATTCTTTTGTGGTG
GGTATGATTTAGAAGAACTGTCGGAGACCCCAGAAAAAGATAGGCAAAAG
AAGATATCAACTATAATTTTTGGTGATGGACCAATGAAACTTGTCCGGGA
ATCATGACATTAAATGAAGCAATATCTTTGGCAAAGGAGATTTCAAAATC
TCCTCAAGGCTGTTTACGTGCAGATCGGCAATCAGCGTTGTATTCGAGTT
ATGAAGCCAACGATATTGACGATGCTTTTTGTTTTGAAGTTGAAAATGCT
GCACATGTCATTTCTGAGGGTCCAACACGTATGGCACTGACAAAGCCTTT
AATAGCAGCTGTATCAGGATATGCTGTCGCTGGAGGACTGGAACTAGCCT
CAATGTGTGATATGCGAGTTGTAGAAGAAAATGCTCAATTTGGTGTACTT
TGCAGGCGGTTTGGTGTCCCTCTGATTGACGGTGGTACTGTTAGATTGCC
GAAGCTGATTGGTCTGTCAAGAGCAATGGATATGATTCTGACTGGTCGAT
TAGTTGGTGCCGAAGAAGCCCTTGCTTTTGGACTTGCCAATAGAGTTGTC
AAGAAAGGTACAGTTAGAAAGTAAGCCATGTGTCATAGTTGAGCGTCTCG
ATTCTCTCAATGTAATGACCATTGGAATCAACCGTCCACAGAAACGAAAT
TGTGTTAACATTGAGACAGCTGGGCTATTAATCAGTGCATTTAAAGAATT
TGAAAAAGATGATCAAATTCACTGTGCTGTTTTGCATGGCTTTGGAGGAT
TCTTTTGTGGTGGGTATGATTTAGAAGAACTGTCGGAGACCCCAGAAAAA
GATAGGCAAAAGAAGATATCAACTATAATTTTTGGTGATGGACCAATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044542XLOC_044542Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071705-exon-scaffold_63-1575043694:140449..140733TCONS_00071705-exon-scaffold_63-1575043694:140449..140733Clytia hemisphaericaexon
TCONS_00071705-exon-scaffold_63-1575043694:139923..140217TCONS_00071705-exon-scaffold_63-1575043694:139923..140217Clytia hemisphaericaexon
TCONS_00071705-exon-scaffold_63-1575043694:138589..138749TCONS_00071705-exon-scaffold_63-1575043694:138589..138749Clytia hemisphaericaexon
TCONS_00071705-exon-scaffold_63-1575043694:129225..129369TCONS_00071705-exon-scaffold_63-1575043694:129225..129369Clytia hemisphaericaexon
TCONS_00071705-exon-scaffold_63-1575043694:128513..128670TCONS_00071705-exon-scaffold_63-1575043694:128513..128670Clytia hemisphaericaexon
TCONS_00071705-exon-scaffold_63-1575043694:128107..128146TCONS_00071705-exon-scaffold_63-1575043694:128107..128146Clytia hemisphaericaexon
TCONS_00071705-exon-scaffold_63-1510915933:140449..140733TCONS_00071705-exon-scaffold_63-1510915933:140449..140733Clytia hemisphaericaexon
TCONS_00071705-exon-scaffold_63-1510915933:139923..140217TCONS_00071705-exon-scaffold_63-1510915933:139923..140217Clytia hemisphaericaexon
TCONS_00071705-exon-scaffold_63-1510915933:138589..138749TCONS_00071705-exon-scaffold_63-1510915933:138589..138749Clytia hemisphaericaexon
TCONS_00071705-exon-scaffold_63-1510915933:129225..129369TCONS_00071705-exon-scaffold_63-1510915933:129225..129369Clytia hemisphaericaexon
TCONS_00071705-exon-scaffold_63-1510915933:128513..128670TCONS_00071705-exon-scaffold_63-1510915933:128513..128670Clytia hemisphaericaexon
TCONS_00071705-exon-scaffold_63-1510915933:128107..128146TCONS_00071705-exon-scaffold_63-1510915933:128107..128146Clytia hemisphaericaexon
TCONS_00071705-exon-scaffold_63-1491911889:140449..140733TCONS_00071705-exon-scaffold_63-1491911889:140449..140733Clytia hemisphaericaexon
TCONS_00071705-exon-scaffold_63-1491911889:139923..140217TCONS_00071705-exon-scaffold_63-1491911889:139923..140217Clytia hemisphaericaexon
TCONS_00071705-exon-scaffold_63-1491911889:138589..138749TCONS_00071705-exon-scaffold_63-1491911889:138589..138749Clytia hemisphaericaexon
TCONS_00071705-exon-scaffold_63-1491911889:129225..129369TCONS_00071705-exon-scaffold_63-1491911889:129225..129369Clytia hemisphaericaexon
TCONS_00071705-exon-scaffold_63-1491911889:128513..128670TCONS_00071705-exon-scaffold_63-1491911889:128513..128670Clytia hemisphaericaexon
TCONS_00071705-exon-scaffold_63-1491911889:128107..128146TCONS_00071705-exon-scaffold_63-1491911889:128107..128146Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071705-proteinTCONS_00071705-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_63supercontigscaffold_63:128107..140733 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.79963	8.17927	2.96034	2.59123	0.830593	1.30614	2.10139	2.20289	4.93129	3.99971	2.52369	4.54502	3.32361	4.00576	4.02298	5.16026	5.15782	4.83537	2.18928	2.57683	3.35651	3.02977	6.07003	7.0034	3.96658	3.92563	1.09004	1.17466	3.77213	4.49244
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001753Crotonase_core_superfam
IPR018376Enoyl-CoA_hyd/isom_CS
IPR029045ClpP/crotonase-like_dom
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
molecular_function GO:0003824 catalytic activity
Blast
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BLAST of TCONS_00071705 vs. Swiss-Prot (Human)
Match: ECHD2 (Enoyl-CoA hydratase domain-containing protein 2, mitochondrial OS=Homo sapiens GN=ECHDC2 PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 6.336e-21
Identity = 64/194 (32.99%), Postives = 95/194 (48.97%), Query Frame = 1 
Query:   49 VMTIGINRPQKRNCVNIETAGLLISAFKEFEKDDQIHCAVLH-GFGGFFCGGYDLEELSETPEKDRQKKISTIIFGDGPMGPTRMALTKPLIAAVSGYAVAGGLELASMCDMRVVEENAQFGVLCRRFGVPLIDGGTVRLPKLIGLSRAMDMILTGRLVGAEEALAFGLANRVVKKG----TALNEAISLAKEI 615
            +  I +NRP  RN +       L+    +  +D Q+   +   G  G FC G DL+E  +  E +    +  +    G M     A   P IAA+ G+A+ GGLELA  CD+RV   +A  G++    G+    GGT RLP+ +G++ A ++I TGR +   EA   GL N  V +      A   A +LA+EI
Sbjct:   42 ITEILMNRPSARNALGNVFVSELLETLAQLREDRQVRVLLFRSGVKGVFCAGADLKEREQMSEAEVGVFVQRL---RGLMNDI-AAFPAPTIAAMDGFALGGGLELALACDLRVAASSAVMGLIETTRGLLPGAGGTQRLPRCLGVALAKELIFTGRRLSGTEAHVLGLVNHAVAQNEEGDAAYQRARALAQEI 231
The following BLAST results are available for this feature:
BLAST of TCONS_00071705 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ECHD26.336e-2132.99Enoyl-CoA hydratase domain-containing protein 2, m... [more]
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