TCONS_00071704 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071704
Unique NameTCONS_00071704
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length6283

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071704 ID=TCONS_00071704|Name=TCONS_00071704|organism=Clytia hemisphaerica|type=transcript|length=6283bp
AAAGTTTATCGATAGATTACAACCAGGTGGTAAAAAGGTTGACCACTCTC
ATCACGGCTCCAGAGTCTGGTAACCTTCATGAAGACAGAGGTGAGCAATC
ACCACAAGCAAGTGACTATACTATCTTTCTGAAAGATCTTACTAAAATTG
AAATCATCCTAAAACTACATTGAGTGTTGACAAACAGGTTATCGTATCAT
TATTCTAGCAAATGGATTTAAGAAATTAAAGATGGTCGTCTCTATATCGG
ATTCCAGATGTAATTGGTGGAACTCTAGAAGATGTACATTATACGATTGG
ACATTCAGCTGGTATATTTGATGACACAATCAATATGTTATGTTATTTTG
GGGGCGTCACTTTCAGTTAGGAAAGTCTTTGCCCATTTGATGACACAGAT
ACAAAGCTAAATAAAAAAGTCTCCAATGGTAGATTTGTCGACAACAAAGC
TATCAAAACACGTCTCTACACCAATCTgtggccatttaaaaaaaaactag
gaATCTGTTTTACATCAACGGCAAACCTAAAATATGAGAGAACTTTATAA
AACCGTTTCAGAGATATAAACGTGAACATTAAgcattttttttaaatatt
agcACAGCCGAACATAATGAACGATTTATGAcagaattttcaaagttttg
aggtTAGACCAGACATAGAAGAAGAAACACTGCATTAAGTTCAGAGGCTG
GTCGGTGTGACAAATACCATatcaacaaaaaattacccATATTTGTCAGG
GCAATACTAGATAATCGAAAATAAATCAAACCATGAAACAAGAATTGTGG
ATAAAAGGAAAAGAAGTCCTATAGCTTCATAGCAAAAGAGTCGACTGAAA
TTCTGGTCAAAAGAAAACACgcttaaggaaagaaattttagtggaaagaa
attttggcgaatctGGCGAATTACCAAAAAATTTCACCAAACTCGCCAAA
ATTTCGTTCCGCCAAACTTAAATTAATAGGTTATTCGCAaaaataaattc
tcgccaaatttaattttctttcaattagtctctatttctcctaaaaaccc
ttttctcctcttttttcagctaaaatattaaacaaaaatgatccgttcgc
caaaattaattctcgccaaatttagaaattttattgaatcgccaaaattt
cttcccttaaagatATTTCCTTTAAGGTAAGTAGATTGGAATCTACAATT
GAAAGCTTGCCAAGTTTGAAGGAGTCAAAATCAAGTTCAAGGGACATAGC
AAACGATTTATTGAAGAAGGAATGCTATTTTGATGAAAGGTCACAAGTAC
GTGACTCTATTAGGATAGCTGTACCTACACCAAGAACAAGGCATCAGTTG
TAATGAGTTCGTCAAACGGTTCGGGAAGGATTTTTAGGAGTACACTATCT
ATCGACAAGCAAAACAATTACCGATATCTACAGTCAAGAAAAATATGGAC
TCCTCAATGCCACTAAAAAATTTAGGCAAGGAAGTAGCTCTCCGAAAGAC
CCCTGTCATTTTAACATAAACAACGTCAAAGCAATATATTCTGCCTAAGa
ttgttacatttttattttcagattaaaATAGAATGACCTTGTCACACTAG
GGAAGGGAAAGTTCAATTAAGTTCTATTAATTTTATTCTTCTAAATTCTT
CTGTTTTCTTTGACTCAAGATAAACAAGATTTCTTTATAAACTGCTTAGA
ATCGTTTTGTCAATAATATAAATCGAAGAAGTCAGCACCTTATGAAGATA
ACACCGAGATTAAAGGTCTCCTCAATTTAGCGCGGGGCGaccaaaaaccg
acccttatcgtccacacatacccagcacccatttttgcctaatcCCCCCG
GGTTACTGCAATAACGTAGAAAATTTACTTACACTAAAAACACAAaacct
atgaaataggctaataatATTTCTTTCGCCTATATTTAGTAAACAAATTG
TTtgaagtgaaaataaaaatgggtagttcaaactgaaaagttgtttttga
CAATGGCAATTACTTGAAGATCACCATTCTTCAAACAATGAATTAGACCT
ATTGGACACACAATCAATTACCTTTTATTATACAACCTTGATATTGACAT
GCTTTATTTTCTAACGGCAATTCTTTCTCTTTGACCCAGAAACTCAACTA
AGGACACCAAGTGACCTTCCCTTTTGTATTTCAAGTGAAGAGAAATGATA
GTTTCGCAAGGCGACAACAGATACAAATTTCTTGATGCGCACCGGTTCTT
TGGCTGTTAGCGAGgttaagcaggAGTTTATTTTGTACCGTAAGCGCTCT
ATACCGTGGGATTTTCGCGGGCTAGAGCCCAACTCATGAGGCTGCTTGTG
TCCTGTGGATTTTGACCTGTACGTCGTTGGTTGGGGAGTGGATCTAGGCC
GAGATTTGAAATTTGGAGCTGAGAAACAAGAaagctttttaatttatttc
ttaTTATTTACTTCTATTATAATGAATACACAAAAAGTGCAATCATTCTT
ATCACAAAAGAATGTAAGTTGTAAATAAATAATCTTTATCACTATTTTAT
ATCAACAACAGCAACTTTTCTTTGCTGTCTCTTCTGCTCATGTTTTTATC
TACTATAAAATAAAGTCATATATCTAGctacttttttgttgttttttgtt
ctgtcaaaatcaaaaaccaATAGATACTTTGAACAATATGAAACCAAATT
TCttatgtcttattttttagtgTTTCTGTGGTGCCATCGTCGTCAAATAA
ACAATATCATCATGCCACTCAACCACCACAACTTCCATCAAtttcacaac
aacaacaaaagaagaaatctttatttataTTTCCAAATTCGTCTTCAACT
ACTTCACCACATCAGCCTGTCTTAAACCTTACAACACAACCGCTCAACTT
CATaccagaaagaaaaattatcccCAAAGAATTATACAACGTTCCATCAT
CTATAAATTCCTCAAAAATTTACCCACCACCGAATATTATTTACCGACGA
CCGAAAATTATTCGCCAACCACGTAAGATATTTATACAACCACCAAAGAT
TCATCCACCACCTATCATTATCGAAGTTCACTTACCACCGAAAGTTCATT
ACCGACCACCAAAAATTATTCGCCGACCACGTATAACATATCAACAACCA
CCGAAGTTTCACTCGCCGAGCGAAATTGTTTATGAACCGTCGAAACTTCA
CCCGTTGTCAACGATTACAGACCTGTCTCCAAAGATATGCCATCTTCCGC
TAAAGAAATCGCAAGAAATGATTCAACATTCATCTAAAATTATTCAAATC
CCCTCCAAGGTTATCCATCAGTCACCAAACAATTCACAGCATTTGTCAAA
GATTAAGAAAAGACGGTCCAGGAATATTGAAAAGTCTTCCAAAATAAACC
AGTCCGAGAATATTAAAAAGCCTTGCGAGAGTGTCAAAAAGTCATCCGAG
ATTGTCAAAAAGCCGTCCGAGATTGTTGAAAAGTCATCTGAGATTGTCAA
AAAGTCATCCAAGGTTGTCAAAAAGCCGACCGATACTATCGAAAAACCGT
CCGATATTATGATAAAGCCATCCGAGAGTATTAAAAATTTATGTTGTAGT
GTTCAAGAGCCATCCGAGAATATTGAACaaccatccaaaaatattcCGAA
ATCATACGAGATTGTCCAAATATTCTCAAAAGAGTCGACAGAAAGTATGA
GGTTTCAACTTAAATGCCGAAAATACCAGATAAATCGAAGCAGAAACAAG
ATACTGAGTCTGctactgaaaataattttaccaACGTTGTACATCCTGAT
TATGAATATCATATCGTTGATAAATCTTACAATACAATATCAAGTGAAAA
GCCAGCAGCAACCAGAAAGCAGTGAAAGAATTCTCAACGATGATAAAATA
TACGACCAGAAAAACCAATGGCACAACCGAAAGATCTACGAGTATAAGAA
AAGAATTtctgaaaaacaacaaatttatcccagaaacaaaaataaacttc
GTTCATTGTGTTGAGTACTCAATACTTAACCATGCTTCATTTAATGAAAG
ACgaatataatatttaaagaacTGCACAGAGCaccaaaccaaaaaaaaaa
gaagatttataTCGAGTCAAAATTGCGTACATTGAGAAGAACAGTTAACC
GACTACAACCAAGACAAAATTTAGCGCAGAGAAGTTGTTGAATAAATTCA
GAGATGTCGAATAGAATGCAGATTTGTTTACCGAATGAAACTAACAATTA
CCTAAAGACTGAAATGTTAAAAGAGAAACTGAAATCGGACAAATAGTTTA
ttgattttatgaaatttttaagaGAATAAATTGAGTTTATGTAATATTTA
TGAATCAGACGATAATTTGTAATTTagttactttcaaataaaatatttca
gcaTTAGAAATTGTTAATTATACGTAAAATTTGATGTATAAAGGACCGAC
ATCAAAGATGAAAACAACTTGAAGGCCTGCGAAGATGAAAACTTGACATG
CAGTCCAAAATACACCGATCATGTAATGTTTTAATTTAGTGACGAGAACG
TCACTTGTCAAACAATGAGGAAGTGAAGTCATATCAGTGTACTAACTAAA
ATCCAGAGAAGAATAAACCATTAAAACAGTTATGAAAACTCGATAAGTAA
ACAACCACAATTGAGCACTTAATTGCACCAAAACATCAGCACGAAAACAA
AAGCATTAAAAAGTTAGTGATTCCTGAAAGAAAGAAGTAAGCGAAACCAC
GATCCCGAATTTTTATTGAATTGACGAGGACGTCACTTGTCGAACGTCGG
AGATGTGAAGCTAGAAAACTAATCATTGATGAATAATGCAAACAGAGACT
AGAACTGAGCCAACACGATATTAATGAACTGAAAGATGAATAGAAATCAA
TAGAGTGGAGCTCAGGCCCTCGAGCCCAGACCCCTGAATAGGGCGAGCAA
ACATGAGcgagaaaaggaaagaaatcgAGGACTTGAAAAGGAGGGCTCGA
AGAAAGAGGACTTGGAAAGAAGAGCTCGAAGGAAAAGGACTTGAAAAGGA
GAACTTGAAGGAGAAGGACTTGAACAGAGACTTTCGTTAATTACACGCCA
GAGTTACTAATTTATTTGATGTTATTTATGTTACGcttatttgatattta
ttgcTTAATTAAAGAAACAGAATTGATGTTGATTGAAATCTATTAGCGTA
CCTTTACTACGTGTCCATAAACTTATCCCCAATAAGGAATACCCTGATCG
AAGAAACAGTTAAGTGATCTGAGAGGTCCCCTCAATAACTAAAGGGTGAC
CCCAATCGCCTAACTTCCCTTCGTCACAATACCAAAGATGAATACAAAAG
TAGAACTCTTACAATAAAGATTTAATAGATTTTATTGCCTTAGGGGAATT
TGTAGTGGAATTCACTTTTGATTTagtgaattttgattttgattttttag
ttaCATTAGTTCTTTGATCAGAGTAAGTTGTATGTATGCGTGTtatggaa
aatatatatttttactaAATGGTTTTAACTGTTTTACTATTTCATATTTT
AGAACCTGAAGATGAATCAAAAGTATTCGAAAtatattgtttaaaataaa
ataaaattaaattgctGGTCCAATTTCATTGATATTAATATAAAGTTTCT
TAGAAGGAGTCACTGTGTATCGGCAACTTGCCTGTCATCTTACAGACAGT
CCTGCTGAGGAAGAAGACGATAGTATCGTTGAGATTGCAGTTGGTGTCAC
AATTTCCATCTTCCTCATCTTTGTTGTGATAGTGAGCATGTATGTCTATT
TGTAAAGGCATCATAATCGTAAAATCCTATTAGAGGGCGCATTGTAGTGG
AGATATTAGCAATTAATGGTGTATGGTATGAAAGTGATACTTAAAAgatt
tactcttaggttccaaagaAACGGGGGAGGGGTTGGAGAActttcgagat
tttaataagCGAGGGACCTAATTACcagggggagggggttggaaattgca
cgtctgaaaactcaaaaataaggtaaatataggctaaaatgaggctattt
agagcaaaacaAGAAGGGCATAGGGCGTGAAGgcccaaaatcagaaaaaa
attaatcatgaaatatcgagaaaatgccaaaaaaccggtatTTCCagcaa
atgttttttttcgaaaatcgggctccgtcactttttggaAATCACCATTT
AGCATCACTGTGGAAAAAATCagaactaatgagccaataccgagaaaagc
tggtaacagacgaacgaacgaacgaacgaacNN
Run BLAST on NCBI

protein sequence of TCONS_00071704-protein

>TCONS_00071704-protein ID=TCONS_00071704-protein|Name=TCONS_00071704-protein|organism=Clytia hemisphaerica|type=polypeptide|length=248bp
MIQHSSKIIQIPSKVIHQSPNNSQHLSKIKKRRSRNIEKSSKINQSENIK
KPCESVKKSSEIVKKPSEIVEKSSEIVKKSSKVVKKPTDTIEKPSDIMIK
PSESIKNLCCSVQEPSENIEQPSKNIPKSYEIVQIFSKESTESMRFQLKC
RKYQINRSRNKILSLLLKIILPTLYILIMNIISLINLTIQYQVKSQQQPE
SSERILNDDKIYDQKNQWHNRKIYEYKKRISEKQQIYPRNKNKLRSLC
Run BLAST on NCBI

transcript from alignment at scaffold_63:112496..118854-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071704 ID=TCONS_00071704|Name=TCONS_00071704|organism=Clytia hemisphaerica|type=transcript|length=6359bp|location=Sequence derived from alignment at scaffold_63:112496..118854- (Clytia hemisphaerica)
AAAGTTTATCGATAGATTACAACCAGGTGGTAAAAAGGTTGACCACTCTC ATCACGGCTCCAGAGTCTGGTAACCTTCATGAAGACAGAGGTGAGCAATC ACCACAAGCAAGTGACTATACTATCTTTCTGAAAGATCTTACTAAAATTG AAATCATCCTAAAACTACATTGAGTGTTGACAAACAGGTTATCGTATCAT TATTCTAGCAAATGGATTTAAGAAATTAAAGATGGTCGTCTCTATATCGG ATTCCAGATGTAATTGGTGGAACTCTAGAAGATGTACATTATACGATTGG ACATTCAGCTGGTATATTTGATGACACAATCAATATGTTATGTTATTTTG GGGGCGTCACTTTCAGTTAGGAAAGTCTTTGCCCATTTGATGACACAGAT ACAAAGCTAAATAAAAAAGTCTCCAATGGTAGATTTGTCGACAACAAAGC TATCAAAACACGTCTCTACACCAATCTGTGGCCATTTAAAAAAAAACTAG GAATCTGTTTTACATCAACGGCAAACCTAAAATATGAGAGAACTTTATAA AACCGTTTCAGAGATATAAACGTGAACATTAAGCATTTTTTTTAAATATT AGCACAGCCGAACATAATGAACGATTTATGACAGAATTTTCAAAGTTTTG AGGTTAGACCAGACATAGAAGAAGAAACACTGCATTAAGTTCAGAGGCTG GTCGGTGTGACAAATACCATATCAACAAAAAATTACCCATATTTGTCAGG GCAATACTAGATAATCGAAAATAAATCAAACCATGAAACAAGAATTGTGG ATAAAAGGAAAAGAAGTCCTATAGCTTCATAGCAAAAGAGTCGACTGAAA TTCTGGTCAAAAGAAAACACGCTTAAGGAAAGAAATTTTAGTGGAAAGAA ATTTTGGCGAATCTGGCGAATTACCAAAAAATTTCACCAAACTCGCCAAA ATTTCGTTCCGCCAAACTTAAATTAATAGGTTATTCGCAAAAATAAATTC TCGCCAAATTTAATTTTCTTTCAATTAGTCTCTATTTCTCCTAAAAACCC TTTTCTCCTCTTTTTTCAGCTAAAATATTAAACAAAAATGATCCGTTCGC CAAAATTAATTCTCGCCAAATTTAGAAATTTTATTGAATCGCCAAAATTT CTTCCCTTAAAGATATTTCCTTTAAGGTAAGTAGATTGGAATCTACAATT GAAAGCTTGCCAAGTTTGAAGGAGTCAAAATCAAGTTCAAGGGACATAGC AAACGATTTATTGAAGAAGGAATGCTATTTTGATGAAAGGTCACAAGTAC GTGACTCTATTAGGATAGCTGTACCTACACCAAGAACAAGGCATCAGTTG TAATGAGTTCGTCAAACGGTTCGGGAAGGATTTTTAGGAGTACACTATCT ATCGACAAGCAAAACAATTACCGATATCTACAGTCAAGAAAAATATGGAC TCCTCAATGCCACTAAAAAATTTAGGCAAGGAAGTAGCTCTCCGAAAGAC CCCTGTCATTTTAACATAAACAACGTCAAAGCAATATATTCTGCCTAAGA TTGTTACATTTTTATTTTCAGATTAAAATAGAATGACCTTGTCACACTAG GGAAGGGAAAGTTCAATTAAGTTCTATTAATTTTATTCTTCTAAATTCTT CTGTTTTCTTTGACTCAAGATAAACAAGATTTCTTTATAAACTGCTTAGA ATCGTTTTGTCAATAATATAAATCGAAGAAGTCAGCACCTTATGAAGATA ACACCGAGATTAAAGGTCTCCTCAATTTAGCGCGGGGCGACCAAAAACCG ACCCTTATCGTCCACACATACCCAGCACCCATTTTTGCCTAATCCCCCCG GGTTACTGCAATAACGTAGAAAATTTACTTACACTAAAAACACAAAACCT ATGAAATAGGCTAATAATATTTCTTTCGCCTATATTTAGTAAACAAATTG TTTGAAGTGAAAATAAAAATGGGTAGTTCAAACTGAAAAGTTGTTTTTGA CAATGGCAATTACTTGAAGATCACCATTCTTCAAACAATGAATTAGACCT ATTGGACACACAATCAATTACCTTTTATTATACAACCTTGATATTGACAT GCTTTATTTTCTAACGGCAATTCTTTCTCTTTGACCCAGAAACTCAACTA AGGACACCAAGTGACCTTCCCTTTTGTATTTCAAGTGAAGAGAAATGATA GTTTCGCAAGGCGACAACAGATACAAATTTCTTGATGCGCACCGGTTCTT TGGCTGTTAGCGAGGTTAAGCGNGATAGTTTCGCAAGGCGACAACAGATA CAAATTTCTTGACGCGCACCGGTTCTTTGCTGTTAGCGAGGTTAAGCAGG AGTTTATTTTGTACCGTAAGCGCTCTATACCGTGGGATTTTCGCGGGCTA GAGCCCAACTCATGAGGCTGCTTGTGTCCTGTGGATTTTGACCTGTACGT CGTTGGTTGGGGAGTGGATCTAGGCCGAGATTTGAAATTTGGAGCTGAGA AACAAGAAAGCTTTTTAATTTATTTCTTATTATTTACTTCTATTATAATG AATACACAAAAAGTGCAATCATTCTTATCACAAAAGAATGTAAGTTGTAA ATAAATAATCTTTATCACTATTTTATATCAACAACAGCAACTTTTCTTTG CTGTCTCTTCTGCTCATGTTTTTATCTACTATAAAATAAAGTCATATATC TAGCTACTTTTTTGTTGTTTTTTGTTCTGTCAAAATCAAAAACCAATAGA TACTTTGAACAATATGAAACCAAATTTCTTATGTCTTATTTTTTAGTGTT TCTGTGGTGCCATCGTCGTCAAATAAACAATATCATCATGCCACTCAACC ACCACAACTTCCATCAATTTCACAACAACAACAAAAGAAGAAATCTTTAT TTATATTTCCAAATTCGTCTTCAACTACTTCACCACATCAGCCTGTCTTA AACCTTACAACACAACCGCTCAACTTCATACCAGAAAGAAAAATTATCCC CAAAGAATTATACAACGTTCCATCATCTATAAATTCCTCAAAAATTTACC CACCACCGAATATTATTTACCGACGACCGAAAATTATTCGCCAACCACGT AAGATATTTATACAACCACCAAAGATTCATCCACCACCTATCATTATCGA AGTTCACTTACCACCGAAAGTTCATTACCGACCACCAAAAATTATTCGCC GACCACGTATAACATATCAACAACCACCGAAGTTTCACTCGCCGAGCGAA ATTGTTTATGAACCGTCGAAACTTCACCCGTTGTCAACGATTACAGACCT GTCTCCAAAGATATGCCATCTTCCGCTAAAGAAATCGCAAGAAATGATTC AACATTCATCTAAAATTATTCAAATCCCCTCCAAGGTTATCCATCAGTCA CCAAACAATTCACAGCATTTGTCAAAGATTAAGAAAAGACGGTCCAGGAA TATTGAAAAGTCTTCCAAAATAAACCAGTCCGAGAATATTAAAAAGCCTT GCGAGAGTGTCAAAAAGTCATCCGAGATTGTCAAAAAGCCGTCCGAGATT GTTGAAAAGTCATCTGAGATTGTCAAAAAGTCATCCAAGGTTGTCAAAAA GCCGACCGATACTATCGAAAAACCGTCCGATATTATGATAAAGCCATCCG AGAGTATTAAAAATTTATGTTGTAGTGTTCAAGAGCCATCCGAGAATATT GAACAACCATCCAAAAATATTCCGAAATCATACGAGATTGTCCAAATATT CTCAAAAGAGTCGACAGAAAGTATGAGGTTTCAACTTAAATGCCGAAAAT ACCAGATAAATCGAAGCAGAAACAAGATACTGAGTCTGCTACTGAAAATA ATTTTACCAACGTTGTACATCCTGATTATGAATATCATATCGTTGATAAA TCTTACAATACAATATCAAGTGAAAAGCCAGCAGCAACCAGAAAGCAGTG AAAGAATTCTCAACGATGATAAAATATACGACCAGAAAAACCAATGGCAC AACCGAAAGATCTACGAGTATAAGAAAAGAATTTCTGAAAAACAACAAAT TTATCCCAGAAACAAAAATAAACTTCGTTCATTGTGTTGAGTACTCAATA CTTAACCATGCTTCATTTAATGAAAGACGAATATAATATTTAAAGAACTG CACAGAGCACCAAACCAAAAAAAAAAGAAGATTTATATCGAGTCAAAATT GCGTACATTGAGAAGAACAGTTAACCGACTACAACCAAGACAAAATTTAG CGCAGAGAAGTTGTTGAATAAATTCAGAGATGTCGAATAGAATGCAGATT TGTTTACCGAATGAAACTAACAATTACCTAAAGACTGAAATGTTAAAAGA GAAACTGAAATCGGACAAATAGTTTATTGATTTTATGAAATTTTTAAGAG AATAAATTGAGTTTATGTAATATTTATGAATCAGACGATAATTTGTAATT TAGTTACTTTCAAATAAAATATTTCAGCATTAGAAATTGTTAATTATACG TAAAATTTGATGTATAAAGGACCGACATCAAAGATGAAAACAACTTGAAG GCCTGCGAAGATGAAAACTTGACATGCAGTCCAAAATACACCGATCATGT AATGTTTTAATTTAGTGACGAGAACGTCACTTGTCAAACAATGAGGAAGT GAAGTCATATCAGTGTACTAACTAAAATCCAGAGAAGAATAAACCATTAA AACAGTTATGAAAACTCGATAAGTAAACAACCACAATTGAGCACTTAATT GCACCAAAACATCAGCACGAAAACAAAAGCATTAAAAAGTTAGTGATTCC TGAAAGAAAGAAGTAAGCGAAACCACGATCCCGAATTTTTATTGAATTGA CGAGGACGTCACTTGTCGAACGTCGGAGATGTGAAGCTAGAAAACTAATC ATTGATGAATAATGCAAACAGAGACTAGAACTGAGCCAACACGATATTAA TGAACTGAAAGATGAATAGAAATCAATAGAGTGGAGCTCAGGCCCTCGAG CCCAGACCCCTGAATAGGGCGAGCAAACATGAGCGAGAAAAGGAAAGAAA TCGAGGACTTGAAAAGGAGGGCTCGAAGAAAGAGGACTTGGAAAGAAGAG CTCGAAGGAAAAGGACTTGAAAAGGAGAACTTGAAGGAGAAGGACTTGAA CAGAGACTTTCGTTAATTACACGCCAGAGTTACTAATTTATTTGATGTTA TTTATGTTACGCTTATTTGATATTTATTGCTTAATTAAAGAAACAGAATT GATGTTGATTGAAATCTATTAGCGTACCTTTACTACGTGTCCATAAACTT ATCCCCAATAAGGAATACCCTGATCGAAGAAACAGTTAAGTGATCTGAGA GGTCCCCTCAATAACTAAAGGGTGACCCCAATCGCCTAACTTCCCTTCGT CACAATACCAAAGATGAATACAAAAGTAGAACTCTTACAATAAAGATTTA ATAGATTTTATTGCCTTAGGGGAATTTGTAGTGGAATTCACTTTTGATTT AGTGAATTTTGATTTTGATTTTTTAGTTACATTAGTTCTTTGATCAGAGT AAGTTGTATGTATGCGTGTTATGGAAAATATATATTTTTACTAAATGGTT TTAACTGTTTTACTATTTCATATTTTAGAACCTGAAGATGAATCAAAAGT ATTCGAAATATATTGTTTAAAATAAAATAAAATTAAATTGCTGGTCCAAT TTCATTGATATTAATATAAAGTTTCTTAGAAGGAGTCACTGTGTATCGGC AACTTGCCTGTCATCTTACAGACAGTCCTGCTGAGGAAGAAGACGATAGT ATCGTTGAGATTGCAGTTGGTGTCACAATTTCCATCTTCCTCATCTTTGT TGTGATAGTGAGCATGTATGTCTATTTGTAAAGGCATCATAATCGTAAAA TCCTATTAGAGGGCGCATTGTAGTGGAGATATTAGCAATTAATGGTGTAT GGTATGAAAGTGATACTTAAAAGATTTACTCTTAGGTTCCAAAGAAACGG GGGAGGGGTTGGAGAACTTTCGAGATTTTAATAAGCGAGGGACCTAATTA CCAGGGGGAGGGGGTTGGAAATTGCACGTCTGAAAACTCAAAAATAAGGT AAATATAGGCTAAAATGAGGCTATTTAGAGCAAAACAAGAAGGGCATAGG GCGTGAAGGCCCAAAATCAGAAAAAAATTAATCATGAAATATCGAGAAAA TGCCAAAAAACCGGTATTTCCAGCAAATGTTTTTTTTCGAAAATCGGGCT CCGTCACTTTTTGGAAATCACCATTTAGCATCACTGTGGAAAAAATCAGA ACTAATGAGCCAATACCGAGAAAAGCTGGTAACAGACGAACGAACGAACG AACGAACNN

Coding sequence (CDS) from alignment at scaffold_63:112496..118854-

>TCONS_00071704 ID=TCONS_00071704|Name=TCONS_00071704|organism=Clytia hemisphaerica|type=CDS|length=747bp|location=Sequence derived from alignment at scaffold_63:112496..118854- (Clytia hemisphaerica)
ATGATTCAACATTCATCTAAAATTATTCAAATCCCCTCCAAGGTTATCCA
TCAGTCACCAAACAATTCACAGCATTTGTCAAAGATTAAGAAAAGACGGT
CCAGGAATATTGAAAAGTCTTCCAAAATAAACCAGTCCGAGAATATTAAA
AAGCCTTGCGAGAGTGTCAAAAAGTCATCCGAGATTGTCAAAAAGCCGTC
CGAGATTGTTGAAAAGTCATCTGAGATTGTCAAAAAGTCATCCAAGGTTG
TCAAAAAGCCGACCGATACTATCGAAAAACCGTCCGATATTATGATAAAG
CCATCCGAGAGTATTAAAAATTTATGTTGTAGTGTTCAAGAGCCATCCGA
GAATATTGAACAACCATCCAAAAATATTCCGAAATCATACGAGATTGTCC
AAATATTCTCAAAAGAGTCGACAGAAAGTATGAGGTTTCAACTTAAATGC
CGAAAATACCAGATAAATCGAAGCAGAAACAAGATACTGAGTCTGCTACT
GAAAATAATTTTACCAACGTTGTACATCCTGATTATGAATATCATATCGT
TGATAAATCTTACAATACAATATCAAGTGAAAAGCCAGCAGCAACCAGAA
AGCAGTGAAAGAATTCTCAACGATGATAAAATATACGACCAGAAAAACCA
ATGGCACAACCGAAAGATCTACGAGTATAAGAAAAGAATTTCTGAAAAAC
AACAAATTTATCCCAGAAACAAAAATAAACTTCGTTCATTGTGTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044541XLOC_044541Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071704-proteinTCONS_00071704-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071704-exon-scaffold_63-1575043694:116591..118854TCONS_00071704-exon-scaffold_63-1575043694:116591..118854Clytia hemisphaericaexon
TCONS_00071704-exon-scaffold_63-1575043694:112496..116514TCONS_00071704-exon-scaffold_63-1575043694:112496..116514Clytia hemisphaericaexon
TCONS_00071704-exon-scaffold_63-1510915933:116591..118854TCONS_00071704-exon-scaffold_63-1510915933:116591..118854Clytia hemisphaericaexon
TCONS_00071704-exon-scaffold_63-1510915933:112496..116514TCONS_00071704-exon-scaffold_63-1510915933:112496..116514Clytia hemisphaericaexon
TCONS_00071704-exon-scaffold_63-1491911889:116591..118854TCONS_00071704-exon-scaffold_63-1491911889:116591..118854Clytia hemisphaericaexon
TCONS_00071704-exon-scaffold_63-1491911889:112496..116514TCONS_00071704-exon-scaffold_63-1491911889:112496..116514Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_63supercontigscaffold_63:112496..118854 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.285952 0.241195 0.278458 0.23657 6.19064 3.77352 2.79923 3.37196 1.01235 1.41565 1.6197 0.890837 1.07322 1.00084 0.66491 0.732255 0.917836 0.777011 0.68493 0.702837 0.939555 0.923613 0.531281 0.781287 1.86204 2.82549 1.37984 1.53929 1.46855 1.34727
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00071704 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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