TCONS_00071703 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071703
Unique NameTCONS_00071703
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length80

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071703 ID=TCONS_00071703|Name=TCONS_00071703|organism=Clytia hemisphaerica|type=transcript|length=80bp
caggaaGAAATGGATGCTTACACTCCTTGTTTAAATTCACAAAATCAAGA
TATGATTACTGCTATTCAAAACGCATCAGG
Run BLAST on NCBI

transcript from alignment at scaffold_63:2090..2485-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071703 ID=TCONS_00071703|Name=TCONS_00071703|organism=Clytia hemisphaerica|type=transcript|length=396bp|location=Sequence derived from alignment at scaffold_63:2090..2485- (Clytia hemisphaerica)
CAGGAAGAAATGGATGCTTACACTCCTTGTTTAAAGTGGGTTTTTTATTC
AATTGTTTGAATCATTTCGTTTTTTTCGCTAGCATTCGAAAGATTTTGAC
CTCTGATTCGACGAGTTACAAGTTTGTCCGATAAAAAATGAACCCAAAAT
TGCTTTTAAAAGAATAAAGCAGTTTGATGATAATTATATGACTTGAAAGA
AGTAGTTCCTTAAATTTTTTGAAGATTTTGCAAATAGAATCGATTGAAAG
AGGTTGCTTTTTATTACATTCTGTTTGCTTAGAGATAAAATACCCAGACT
TTGTATTGTCAAATCTTAATCAAATTTTTATTAAATTTTTTTCCCTTACA
GTTCACAAAATCAAGATATGATTACTGCTATTCAAAACGCATCAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044540XLOC_044540Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071703-exon-scaffold_63-1575043694:2451..2485TCONS_00071703-exon-scaffold_63-1575043694:2451..2485Clytia hemisphaericaexon
TCONS_00071703-exon-scaffold_63-1575043694:2090..2134TCONS_00071703-exon-scaffold_63-1575043694:2090..2134Clytia hemisphaericaexon
TCONS_00071703-exon-scaffold_63-1510915933:2451..2485TCONS_00071703-exon-scaffold_63-1510915933:2451..2485Clytia hemisphaericaexon
TCONS_00071703-exon-scaffold_63-1510915933:2090..2134TCONS_00071703-exon-scaffold_63-1510915933:2090..2134Clytia hemisphaericaexon
TCONS_00071703-exon-scaffold_63-1491911889:2451..2485TCONS_00071703-exon-scaffold_63-1491911889:2451..2485Clytia hemisphaericaexon
TCONS_00071703-exon-scaffold_63-1491911889:2090..2134TCONS_00071703-exon-scaffold_63-1491911889:2090..2134Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_63supercontigscaffold_63:2090..2485 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00071703 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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