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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071652 ID=TCONS_00071652|Name=TCONS_00071652|organism=Clytia hemisphaerica|type=transcript|length=2378bp
aaaaaatataacAGATTGGCGTTATTAGTCTACAACCATAGACATAACGA
ATAAATTTGCATAGTTTTGTTGGTGGTTACGTTCAAAGTCCAGTTGATAT
CTTGTGGCCAAACAAAGCGTGTTCTTGAAATCGGGATTTATTGCCAGTcg
ttcatttattttcaaacatttgaagaactttgaaaaaaaatgggTGCAGG
AGCTGGCAAGGAACAAGATggcaacaaaaaacaaaaaatcactaaaaaag
acttaaagtttttcttaaaagaaattaaagaacATACTGCTGGCATTAAC
AGTATGACATTAACACCCGATGGCTCCATGCTGGTGTCCGCCAGTGAAGA
CGCCAACGCCCATATCCTAGACACAACCAGTGAACAAACAGTATCCGTGT
TAAAAGGAcacgaaaaatatataaacTCTGTGGTGTGCAATAACGATTTC
GTGTTCACCGCCTCAGCCGATAAAATGATCCGGAAATGGCGTATAGATAC
AGGCATGTGCTCCAAAACAATGCGTGGCCACACATGCGCCGTAAATCGTC
TCATGCTTGTAGACAGCTTACTTTTTTCATCATCATACGATCGAAGTGCA
AGATGTTGGCATATCGATACTGGTGAATGCCTTGCAGTTTTTAACGGTCA
CAAACTCGGTGTCTACCCATTGTTATACATTCCACAATCAGATGATTCCT
TCGAAAGAGATATCACAGACCTCAATAATAACCACGATATATTAATCACT
GGGTCAGCAGATACTACCGCTAAATCCTGGGCACTTAACACGAATGAGGT
CTTATTGACGTATAAAGGCCATAATGGAGCAGTTTTATCTATGGCATGTG
ACAACAGTGGGAAATATTTGTTCACTGGAAGTCAAGATTCAACTATCCGA
TCATATGTCTTGTCTACAGGAAAGCCTGTCAATGTATTCAGTGGACATGC
CGCTTCAGTGCTACAGTTACAGGTTGTTAACCGATTGCTATTTTCATCAA
GTGCTGACCATACCGTTCGATGTTGGGTATACGAGTTTGGGGAATGCACG
CGTGTCTACCGTGGACACACGCACACTGTTGGTTGCATGAAAGTTGCCAA
AGGATTATTGTTAACTGGGTCTGGGGATGATACAGCCAAAATCTTTGACG
CGAAATCGGGAACAAACAAACGAACATTCCGTGGACATATTGGCTCAGTT
AATGCACTCGTGCTACACAAACATAAACTATACACTGGATCAAATGATGG
TGCGATTAGGATTTGGGATGCATCCGGTATCGGTGAAGATGATGACGACG
ACGATGAGGAGGAAGATAGTGGCGTCGTCCCGATGCAGCAAGAACAACAA
ACACCACAATCTCAATCTCCAGCACCTAGCAACGACGATGCAGCACCGAT
TAATGATGAAAATGCACAACCAGTTAACGAATAATGTATTGTATAAACAA
TTTGTAAAACATAAACATTAACATCTTCTTGTGTTGATGATGATGAGGTT
GTTGTTGCCGATGATTTCAAGTCCAACTAATGTCCATCTAACATTCATAA
AACGTTCGATCGATGATCAAATAACAATGCGTGTAAACCCGGGGACGGAA
GAGGAATAAACTTGGTAAGAAAATGAGACTGATTGAAACAACGCAGAAGA
AACTATCAACGAcgacaacgaggctcaaaaatgaaAACCTTCTTGAATTA
TGGACACGTGACTTCAAATTCTTTGCCACGTGTTTGGGGAAAAGTCCTGT
GTGAAATTGACAATTCCCGAACGGAATCAGAATTGTTTACAACCCTCCTG
gattttttaatgaatatttAATGATGTTCCTGGAATGATTTTCCTTGACT
ATGAAGACTTAATGAAAAGAGACGAGAAaaaacgaaattaaattcttttt
gtaaattttttaactCACTCAGCAAAGCTATACGATACCTGACACTGGTA
ATTCGAGgatcaaaatccaaaaaattacaTGAGTTTTTATAACTTTCAAG
TCACCCTTAGGGTGTAGAAAAAACTATAAAGTGTCGTCAGTGATTTGCTT
GGTGCGTCCCGCACAAAATATGCATTTCTATATCAGATTGTAttgtttat
aaaaaacgtgtttgGAAGTATTTCTGAGACAATTATTTCAAGGGTTTATC
GAATTTAATGTAATGAATCTGAAGGTGGCCTGTCGCAAAATTTTGCTGCT
ATGACGATAAACATGACGAAATGGAAAAGGATTTTAACGGCTTAATCTtc
tctttgaaaatttatttgtatttacctataaaaattgaaatgggGAAAAA
AGCTGAAACAATATTTCGCAATAATTGAAATAATTCGTGTTTAATTAGCA
TTTTAGTGCAAAGATTTTTATATGGTAT Run BLAST on NCBI protein sequence of TCONS_00071652-protein >TCONS_00071652-protein ID=TCONS_00071652-protein|Name=TCONS_00071652-protein|organism=Clytia hemisphaerica|type=polypeptide|length=414bp
MGAGAGKEQDGNKKQKITKKDLKFFLKEIKEHTAGINSMTLTPDGSMLVS
ASEDANAHILDTTSEQTVSVLKGHEKYINSVVCNNDFVFTASADKMIRKW
RIDTGMCSKTMRGHTCAVNRLMLVDSLLFSSSYDRSARCWHIDTGECLAV
FNGHKLGVYPLLYIPQSDDSFERDITDLNNNHDILITGSADTTAKSWALN
TNEVLLTYKGHNGAVLSMACDNSGKYLFTGSQDSTIRSYVLSTGKPVNVF
SGHAASVLQLQVVNRLLFSSSADHTVRCWVYEFGECTRVYRGHTHTVGCM
KVAKGLLLTGSGDDTAKIFDAKSGTNKRTFRGHIGSVNALVLHKHKLYTG
SNDGAIRIWDASGIGEDDDDDDEEEDSGVVPMQQEQQTPQSQSPAPSNDD
AAPINDENAQPVNE Run BLAST on NCBI transcript from alignment at scaffold_63:412084..417209+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071652 ID=TCONS_00071652|Name=TCONS_00071652|organism=Clytia hemisphaerica|type=transcript|length=5126bp|location=Sequence derived from alignment at scaffold_63:412084..417209+ (Clytia hemisphaerica)
aaaaaatataacAGATTGGCGTTATTAGTCTACAACCATAGACATAACGA
ATAAATTTGCATAGTTTTGTTGGTGGTTACGTTCAAAGTCCAGTTGATAT
CTTGTGGCCAAACAAAGCGTGTTCTTGAAATCGGGATTTATTGCCAGTcg
ttcatttattttcaaacatttgaagaactttgaaaaaaaatgggTGCAGG
AGCTGGCAAGGAACAAGATggcaacaaaaaacaaaaaatcactaaaaaag
acttaaagtttttcttaaaagaaattaaagaacATACTGCTGGCATTAAC
AGTATGACATTAACACCCGATGGCTCCATGCTGGTGTCCGCCAGTGAAGA
CGCCAACGCCCATATCCTAGACACAACCAGTGAACAAACAGTATCCGTGT
TAAAAGGAcacgaaaaatatataaacTCTGTGGTGTGCAATAACGATTTC
GTGTTCACCGCCTCAGCCGATAAAATGATCCGGAAATGGCGTATAGATAC
AGGCATGTGCTCCAAAACAATGCGTGGCCACACATGCGCCGTAAATCGTC
TCATGCTTGTAGACAGCTTACTTTTTTCATCATCATACGATCGAAGTGCA
AGATGTTGGCATATCGATACTGGTGAATGCCTTGCAGTTTTTAACGGTCA
CAAACTCGGTGTCTACCCATTGTTATACATTCCACAATCAGATGATTCCT
TCGAAAGAGATATCACAGACCTCAATAATAACCACGATATATTAATCACT
GGGTCAGCAGATACTACCGCTAAATCCTGGGCACTTAACACGAATGAGGT
CTTATTGACGTATAAAGGCCATAATGGAGCAGTTTTATCTATGGCATGTG
ACAACAGTGGGAAATATTTGTTCACTGGAAGTCAAGATTCAACTATCCGA
TCATATGTCTTGTCTACAGGAAAGCCTGTCAATGTATTCAGTGGACATGC
CGCTTCAGTGCTACAGTTACAGGTGAGATAATGATAAGTTTTTTTTCCAG
ACATACTGTATTTTGTGATGTTTGTGACATTCACACATGTAATATTTGTA
GCTTGGTTTAAattacaccccttctcacagacccggcaGGATTTATTCAG
CCATTgcggataaaaataacggacagAAACTCGATGGCATAGATATCTTT
TTtgactggggatttcaattctttcggtttcaagttagaaaattcagtgg
ggatgggaaaaataacataatattttccagtgaggattggtttatttgat
tattttcatcgGGGATAAAAATTGGCGGATAGTtctccaccggggacgat
atttcggccaagttttccagtgggaaggggtccgtAAGGGTCTGTAAGAA
AGGGGTATTAAATTACTCATTAAAGAGTCTCAGCATGATTTGAGGACGCA
GATCCGCAACCGCAAGTACCATCTACTTTCTTTGATCCATAATAAAAACA
TGGTTGGTATTCTGCCATAGGAATTTAAATAGCTTAATCATTCATAACTT
TTAAATATTCCAAGAATGAAAGGCACCTATGATTTTTCTTCCTAGAAATG
GTTTGTATTATACAttgtgtcccgaaaaaaagcggacaaatttctatata
aagtaaaatccacATTATTCACGCCAAATTGATAACTTGTATGCTTGACA
TTTCAATCTaaaaaacctattcaatcagCTTGGGAACGGAAAATTGTAAT
ATTATTTCAATTATTAGTCCAAGTTTTGATTATTAGTTTAGAGGATTTTA
CTCCATATAAAATGCCTCTTGTTTGGGACACGCTGTAAGAGGTTTATTCC
TAATTGCCTTATTCAATTGTAATACCTATAAAAGCAATTCTTTTAGGTTG
TTAACCGATTGCTATTTTCATCAAGTGCTGACCATACCGTTCGATGTTGG
GTATACGAGTTTGGGGAATGCACGCGTGTCTACCGTGGACACACGCACAC
TGTTGGTTGCATGAAAGTTGCCAAAGGATTATGTAAGTTCAGATATTGAT
TTTGTCCTTCCTTGTTCaggggttttgctttgtttttggtaggctggcga
ataaaaaaattaaccctggcgatttctagattctaggccgacgaattctt
agcaagcgtagtgtattgattagcgtaaatatgtacttgaggcggcgaac
cgaacttttcgaacggcgaattgtaattttttcgtgccttggacCGGCGA
AATTCACCGTTCACCNCAGCTTGGGAACGGAAAATTGTAATATTATTTCA
ATTATTAGTCCAAGTTTTGATTATTAGTTTAGAGGATTTTACTCCATATA
AAATGCCTCTTGTTTGGGACACGCTGTAAGAGGTTTATTCCTAATTGCCT
TATTCAATTGTAATACCTATAAAAGCAATTCTTTTAGGTTGTTAACCGAT
TGCTATTTTCATCAAGTGCTGACCATACCGTTCGATGTTGGGTATACGAG
TTTGGGGAATGCACGCGTGTCTACCGTGGACACACGCACACTGTTGGTTG
CATGAAAGTTGCCAAAGGATTATGTAAGTTCAGATATTGATTTTGTCCTT
CCTTGTTCaggggttttgctttgtttttggtaggctggcgaataaaaaaa
ttaaccctggcgatttctagattctaggccgacgaattcttagcaagcgt
agtgtattgattagcgtaaatatgtacttgaggcggcgaaccgaactttt
cgaacggcgaattgttattttttcgtgccttggacCGGCGAAATTCACCG
TTCACTGGACCAAAATAAGACCCCTGCTTGTTCAGAAAATACaatcagaa
attttattttatcaaaaaattagaCCTTTTCATTTGGGGTATAATTCACA
CAGTCCTCTTGGGCATTGTTtaagcaattttttttatttgcacTGATCTG
AATCTATTCCAAAAGCATCTAAGTCAACTTTCAGTTTTCAtgccaaaaat
gaaaaagacttTTAATCCTATTAATAATGTTTAGAAACACGAGAGAAAGT
ATTCAAGCAAACTCAATCAGACAGTTTAACCATGGTTTAACTAAATGTTT
CCTTTAACTTCTAGTGTTAACTGGGTCTGGGGATGATACAGCCAAAATCT
TTGACGCGAAATCGGGAACAAACAAACGAACATTCCGTGGACATATTGGC
TCAGTTAATGCACTCGTGGTAAGTAAGGAAATAAACTAAAGTGATTAACN
CAAACAAACGAACATTCCGTGGACATATTGGCTCAGTTAATGCACTCGTG
GTAAGTAAGGAAATACACTAAAGTGATTAACAGAAAGTCGTACAGTCATT
CTTTAGTGTTATGTAgccaaatacaccttttcgatcgtagccgccaattg
ccgtgtgggcatttttttgtccgttttaccaccctaaaaccgtcccagtc
ttttttccgcacctatagacaatagaaaaaggtgtcagaaaaggattgga
tcgagtttggGGGGGGGATACCcgcacggcaattggcggctacggtcgaa
aaggtgtattgtatgTGGAACTTGAAGATAGGGTTGAATGATTTCCTTCA
AGTCAATTAACTAAAGTGGTCAACACAAAGTTGCTTTGAAACTTAACTTG
AGTATATCAACTTGCCCTATTTTGACGTTCGATAACTTCTCTTAACGGAA
GCCAAGACAAGGCAGATCACAGAATCTAAAAAGATGGAATCAattaagaa
taaaataaaacgGTGTCTGAATCCAAGATCTCTACAAAACCGTCGATAGT
ATATAGAAGCACGAATCATTTAATGGATGACAGTAGCCTATATAAAACGG
AGCTACTAGAAAAGTTAAGAAGTATAAAGGAGAAACAGAACTACAACGTA
CATAGAACTTACATTAATTAATAAATCCCAGCCAAAAACGAAGCACAATT
GAAAAGATGTGTCCTTTAAGACTTCTTAACTTAAACTAAGCTCTTTCTAT
GTTTCCTTAGCTACACAAACATAAACTATACACTGGATCAAATGATGGTG
CGATTAGGATTTGGGATGCATCCGGTATCGGTGAAGATGATGACGACGAC
GATGAGGAGGAAGATAGTGGCGTCGTCCCGATGCAGCAAGAACAACAAAC
ACCACAATCTCAATCTCCAGCACCTAGCAACGACGATGCAGCACCGATTA
ATGATGAAAATGCACAACCAGTTAACGAATAATGTATTGTATAAACAATT
TGTAAAACATAAACATTAACATCTTCTTGTGTTGATGATGATGAGGTTGT
TGTTGCCGATGATTTCAAGTCCAACTAATGTCCATCTAACATTCATAAAA
CGTTCGATCGATGATCAAATAACAATGCGTGTAAACCCGGGGACGGAAGA
GGAATAAACTTGGTAAGAAAATGAGACTGATTGAAACAACGCAGAAGAAA
CTATCAACGAcgacaacgaggctcaaaaatgaaAACCTTCTTGAATTATG
GACACGTGACTTCAAATTCTTTGCCACGTGTTTGGGGAAAAGTCCTGTGT
GAAATTGACAATTCCCGAACGGAATCAGAATTGTTTACAACCCTCCTGga
ttttttaatgaatatttAATGATGTTCCTGGAATGATTTTCCTTGACTAT
GAAGACTTAATGAAAAGAGACGAGAAaaaacgaaattaaattctttttgt
aaattttttaactCACTCAGCAAAGCTATACGATACCTGACACTGGTAAT
TCGAGgatcaaaatccaaaaaattacaTGAGTTTTTATAACTTTCAAGTC
ACCCTTAGGGTGTAGAAAAAACTATAAAGTGTCGTCAGTGATTTGCTTGG
TGCGTCCCGCACAAAATATGCATTTCTATATCAGATTGTAttgtttataa
aaaacgtgtttgGAAGTATTTCTGAGACAATTATTTCAAGGGTTTATCGA
ATTTAATGTAATGAATCTGAAGGTGGCCTGTCGCAAAATTTTGCTGCTAT
GACGATAAACATGACGAAATGGAAAAGGATTTTAACGGCTTAATCTtctc
tttgaaaatttatttgtatttacctataaaaattgaaatgggGAAAAAAG
CTGAAACAATATTTCGCAATAATTGAAATAATTCGTGTTTAATTAGCATT
TTAGTGCAAAGATTTTTATATGGTAT Coding sequence (CDS) from alignment at scaffold_63:412084..417209+ >TCONS_00071652 ID=TCONS_00071652|Name=TCONS_00071652|organism=Clytia hemisphaerica|type=CDS|length=6225bp|location=Sequence derived from alignment at scaffold_63:412084..417209+ (Clytia hemisphaerica)
atgggTGCAGGAGCTGGCAAGGAACAAGATggcaacaaaaaacaaaaaat
cactaaaaaagacttaaagtttttcttaaaagaaattaaagaacATACTG
CTGGCATTAACAGTATGACATTAACACCCGATGGCTCCATGCTGGTGTCC
GCCAGTGAAGACGCCAACGCCCATATCCTAGACACAACCAGTGAACAAAC
AGTATCCGTGTTAAAAGGAcacgaaaaatatataaacTCTGTGGTGTGCA
ATAACGATTTCGTGTTCACCGCCTCAGCCGATAAAATGATCCGGAAATGG
CGTATAGATACAGGCATGTGCTCCAAAACAATGCGTGGCCACACATGCGC
CGTAAATCGTCTCATGCTTGTAGACAGCTTACTTTTTTCATCATCATACG
ATCGAAGTGCAAGATGTTGGCATATCGATACTGGTGAATGCCTTGCAGTT
TTTAACGGTCACAAACTCGGTGTCTACCCATTGTTATACATTCCACAATC
AGATGATTCCTTCGAAAGAGATATCACAGACCTCAATAATAACCACGATA
TATTAATCACTGGGTCAGCAGATACTACCGCTAAATCCTGGGCACTTAAC
ACGAATGAGGTCTTATTGACGTATAAAGGCCATAATGGAGCAGTTTTATC
TATGGCATGTGACAACAGTGGGAAATATTTGTTCACTGGAAGTCAAGATT
CAACTATCCGATCATATGTCTTGTCTACAGGAAAGCCTGTCAATGTATTC
AGTGGACATGCCGCTTCAGTGCTACAGTTACAGGTTGTTAACCGATTGCT
ATTTTCATCAAGTGCTGACCATACCGTTCGATGTTGGGTATACGAGTTTG
GGGAATGCACGCGTGTCTACCGTGGACACACGCACACTGTTGGTTGCATG
AAAGTTGCCAAAGGATTATTGTTAACTGGGTCTGGGGATGATACAGCCAA
AATCTTTGACGCGAAATCGGGAACAAACAAACGAACATTCCGTGGACATA
TTGGCTCAGTTAATGCACTCGTGCTACACAAACATAAACTATACACTGGA
TCAAATGATGGTGCGATTAGGATTTGGGATGCATCCGGTATCGGTGAAGA
TGATGACGACGACGATGAGGAGGAAGATAGTGGCGTCGTCCCGATGCAGC
AAGAACAACAAACACCACAATCTCAATCTCCAGCACCTAGCAACGACGAT
GCAGCACCGATTAATGATGAAAATGCACAACCAGTTAACGAATAAatggg
TGCAGGAGCTGGCAAGGAACAAGATggcaacaaaaaacaaaaaatcacta
aaaaagacttaaagtttttcttaaaagaaattaaagaacATACTGCTGGC
ATTAACAGTATGACATTAACACCCGATGGCTCCATGCTGGTGTCCGCCAG
TGAAGACGCCAACGCCCATATCCTAGACACAACCAGTGAACAAACAGTAT
CCGTGTTAAAAGGAcacgaaaaatatataaacTCTGTGGTGTGCAATAAC
GATTTCGTGTTCACCGCCTCAGCCGATAAAATGATCCGGAAATGGCGTAT
AGATACAGGCATGTGCTCCAAAACAATGCGTGGCCACACATGCGCCGTAA
ATCGTCTCATGCTTGTAGACAGCTTACTTTTTTCATCATCATACGATCGA
AGTGCAAGATGTTGGCATATCGATACTGGTGAATGCCTTGCAGTTTTTAA
CGGTCACAAACTCGGTGTCTACCCATTGTTATACATTCCACAATCAGATG
ATTCCTTCGAAAGAGATATCACAGACCTCAATAATAACCACGATATATTA
ATCACTGGGTCAGCAGATACTACCGCTAAATCCTGGGCACTTAACACGAA
TGAGGTCTTATTGACGTATAAAGGCCATAATGGAGCAGTTTTATCTATGG
CATGTGACAACAGTGGGAAATATTTGTTCACTGGAAGTCAAGATTCAACT
ATCCGATCATATGTCTTGTCTACAGGAAAGCCTGTCAATGTATTCAGTGG
ACATGCCGCTTCAGTGCTACAGTTACAGGTTGTTAACCGATTGCTATTTT
CATCAAGTGCTGACCATACCGTTCGATGTTGGGTATACGAGTTTGGGGAA
TGCACGCGTGTCTACCGTGGACACACGCACACTGTTGGTTGCATGAAAGT
TGCCAAAGGATTATTGTTAACTGGGTCTGGGGATGATACAGCCAAAATCT
TTGACGCGAAATCGGGAACAAACAAACGAACATTCCGTGGACATATTGGC
TCAGTTAATGCACTCGTGCTACACAAACATAAACTATACACTGGATCAAA
TGATGGTGCGATTAGGATTTGGGATGCATCCGGTATCGGTGAAGATGATG
ACGACGACGATGAGGAGGAAGATAGTGGCGTCGTCCCGATGCAGCAAGAA
CAACAAACACCACAATCTCAATCTCCAGCACCTAGCAACGACGATGCAGC
ACCGATTAATGATGAAAATGCACAACCAGTTAACGAATAAatgggTGCAG
GAGCTGGCAAGGAACAAGATggcaacaaaaaacaaaaaatcactaaaaaa
gacttaaagtttttcttaaaagaaattaaagaacATACTGCTGGCATTAA
CAGTATGACATTAACACCCGATGGCTCCATGCTGGTGTCCGCCAGTGAAG
ACGCCAACGCCCATATCCTAGACACAACCAGTGAACAAACAGTATCCGTG
TTAAAAGGAcacgaaaaatatataaacTCTGTGGTGTGCAATAACGATTT
CGTGTTCACCGCCTCAGCCGATAAAATGATCCGGAAATGGCGTATAGATA
CAGGCATGTGCTCCAAAACAATGCGTGGCCACACATGCGCCGTAAATCGT
CTCATGCTTGTAGACAGCTTACTTTTTTCATCATCATACGATCGAAGTGC
AAGATGTTGGCATATCGATACTGGTGAATGCCTTGCAGTTTTTAACGGTC
ACAAACTCGGTGTCTACCCATTGTTATACATTCCACAATCAGATGATTCC
TTCGAAAGAGATATCACAGACCTCAATAATAACCACGATATATTAATCAC
TGGGTCAGCAGATACTACCGCTAAATCCTGGGCACTTAACACGAATGAGG
TCTTATTGACGTATAAAGGCCATAATGGAGCAGTTTTATCTATGGCATGT
GACAACAGTGGGAAATATTTGTTCACTGGAAGTCAAGATTCAACTATCCG
ATCATATGTCTTGTCTACAGGAAAGCCTGTCAATGTATTCAGTGGACATG
CCGCTTCAGTGCTACAGTTACAGGTTGTTAACCGATTGCTATTTTCATCA
AGTGCTGACCATACCGTTCGATGTTGGGTATACGAGTTTGGGGAATGCAC
GCGTGTCTACCGTGGACACACGCACACTGTTGGTTGCATGAAAGTTGCCA
AAGGATTATTGTTAACTGGGTCTGGGGATGATACAGCCAAAATCTTTGAC
GCGAAATCGGGAACAAACAAACGAACATTCCGTGGACATATTGGCTCAGT
TAATGCACTCGTGCTACACAAACATAAACTATACACTGGATCAAATGATG
GTGCGATTAGGATTTGGGATGCATCCGGTATCGGTGAAGATGATGACGAC
GACGATGAGGAGGAAGATAGTGGCGTCGTCCCGATGCAGCAAGAACAACA
AACACCACAATCTCAATCTCCAGCACCTAGCAACGACGATGCAGCACCGA
TTAATGATGAAAATGCACAACCAGTTAACGAATAAatgggTGCAGGAGCT
GGCAAGGAACAAGATggcaacaaaaaacaaaaaatcactaaaaaagactt
aaagtttttcttaaaagaaattaaagaacATACTGCTGGCATTAACAGTA
TGACATTAACACCCGATGGCTCCATGCTGGTGTCCGCCAGTGAAGACGCC
AACGCCCATATCCTAGACACAACCAGTGAACAAACAGTATCCGTGTTAAA
AGGAcacgaaaaatatataaacTCTGTGGTGTGCAATAACGATTTCGTGT
TCACCGCCTCAGCCGATAAAATGATCCGGAAATGGCGTATAGATACAGGC
ATGTGCTCCAAAACAATGCGTGGCCACACATGCGCCGTAAATCGTCTCAT
GCTTGTAGACAGCTTACTTTTTTCATCATCATACGATCGAAGTGCAAGAT
GTTGGCATATCGATACTGGTGAATGCCTTGCAGTTTTTAACGGTCACAAA
CTCGGTGTCTACCCATTGTTATACATTCCACAATCAGATGATTCCTTCGA
AAGAGATATCACAGACCTCAATAATAACCACGATATATTAATCACTGGGT
CAGCAGATACTACCGCTAAATCCTGGGCACTTAACACGAATGAGGTCTTA
TTGACGTATAAAGGCCATAATGGAGCAGTTTTATCTATGGCATGTGACAA
CAGTGGGAAATATTTGTTCACTGGAAGTCAAGATTCAACTATCCGATCAT
ATGTCTTGTCTACAGGAAAGCCTGTCAATGTATTCAGTGGACATGCCGCT
TCAGTGCTACAGTTACAGGTTGTTAACCGATTGCTATTTTCATCAAGTGC
TGACCATACCGTTCGATGTTGGGTATACGAGTTTGGGGAATGCACGCGTG
TCTACCGTGGACACACGCACACTGTTGGTTGCATGAAAGTTGCCAAAGGA
TTATTGTTAACTGGGTCTGGGGATGATACAGCCAAAATCTTTGACGCGAA
ATCGGGAACAAACAAACGAACATTCCGTGGACATATTGGCTCAGTTAATG
CACTCGTGCTACACAAACATAAACTATACACTGGATCAAATGATGGTGCG
ATTAGGATTTGGGATGCATCCGGTATCGGTGAAGATGATGACGACGACGA
TGAGGAGGAAGATAGTGGCGTCGTCCCGATGCAGCAAGAACAACAAACAC
CACAATCTCAATCTCCAGCACCTAGCAACGACGATGCAGCACCGATTAAT
GATGAAAATGCACAACCAGTTAACGAATAAatgggTGCAGGAGCTGGCAA
GGAACAAGATggcaacaaaaaacaaaaaatcactaaaaaagacttaaagt
ttttcttaaaagaaattaaagaacATACTGCTGGCATTAACAGTATGACA
TTAACACCCGATGGCTCCATGCTGGTGTCCGCCAGTGAAGACGCCAACGC
CCATATCCTAGACACAACCAGTGAACAAACAGTATCCGTGTTAAAAGGAc
acgaaaaatatataaacTCTGTGGTGTGCAATAACGATTTCGTGTTCACC
GCCTCAGCCGATAAAATGATCCGGAAATGGCGTATAGATACAGGCATGTG
CTCCAAAACAATGCGTGGCCACACATGCGCCGTAAATCGTCTCATGCTTG
TAGACAGCTTACTTTTTTCATCATCATACGATCGAAGTGCAAGATGTTGG
CATATCGATACTGGTGAATGCCTTGCAGTTTTTAACGGTCACAAACTCGG
TGTCTACCCATTGTTATACATTCCACAATCAGATGATTCCTTCGAAAGAG
ATATCACAGACCTCAATAATAACCACGATATATTAATCACTGGGTCAGCA
GATACTACCGCTAAATCCTGGGCACTTAACACGAATGAGGTCTTATTGAC
GTATAAAGGCCATAATGGAGCAGTTTTATCTATGGCATGTGACAACAGTG
GGAAATATTTGTTCACTGGAAGTCAAGATTCAACTATCCGATCATATGTC
TTGTCTACAGGAAAGCCTGTCAATGTATTCAGTGGACATGCCGCTTCAGT
GCTACAGTTACAGGTTGTTAACCGATTGCTATTTTCATCAAGTGCTGACC
ATACCGTTCGATGTTGGGTATACGAGTTTGGGGAATGCACGCGTGTCTAC
CGTGGACACACGCACACTGTTGGTTGCATGAAAGTTGCCAAAGGATTATT
GTTAACTGGGTCTGGGGATGATACAGCCAAAATCTTTGACGCGAAATCGG
GAACAAACAAACGAACATTCCGTGGACATATTGGCTCAGTTAATGCACTC
GTGCTACACAAACATAAACTATACACTGGATCAAATGATGGTGCGATTAG
GATTTGGGATGCATCCGGTATCGGTGAAGATGATGACGACGACGATGAGG
AGGAAGATAGTGGCGTCGTCCCGATGCAGCAAGAACAACAAACACCACAA
TCTCAATCTCCAGCACCTAGCAACGACGATGCAGCACCGATTAATGATGA
AAATGCACAACCAGTTAACGAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00071652-exon-scaffold_63-1491911889:412084..413055 | TCONS_00071652-exon-scaffold_63-1491911889:412084..413055 | Clytia hemisphaerica | exon |
| TCONS_00071652-exon-scaffold_63-1510915933:412084..413055 | TCONS_00071652-exon-scaffold_63-1510915933:412084..413055 | Clytia hemisphaerica | exon |
| TCONS_00071652-exon-scaffold_63-1575043694:412084..413055 | TCONS_00071652-exon-scaffold_63-1575043694:412084..413055 | Clytia hemisphaerica | exon |
| TCONS_00071652-exon-scaffold_63-1491911889:413930..414065 | TCONS_00071652-exon-scaffold_63-1491911889:413930..414065 | Clytia hemisphaerica | exon |
| TCONS_00071652-exon-scaffold_63-1510915933:413930..414065 | TCONS_00071652-exon-scaffold_63-1510915933:413930..414065 | Clytia hemisphaerica | exon |
| TCONS_00071652-exon-scaffold_63-1575043694:413930..414065 | TCONS_00071652-exon-scaffold_63-1575043694:413930..414065 | Clytia hemisphaerica | exon |
| TCONS_00071652-exon-scaffold_63-1491911889:415148..415214 | TCONS_00071652-exon-scaffold_63-1491911889:415148..415214 | Clytia hemisphaerica | exon |
| TCONS_00071652-exon-scaffold_63-1510915933:415148..415214 | TCONS_00071652-exon-scaffold_63-1510915933:415148..415214 | Clytia hemisphaerica | exon |
| TCONS_00071652-exon-scaffold_63-1575043694:415148..415214 | TCONS_00071652-exon-scaffold_63-1575043694:415148..415214 | Clytia hemisphaerica | exon |
| TCONS_00071652-exon-scaffold_63-1491911889:415297..415333 | TCONS_00071652-exon-scaffold_63-1491911889:415297..415333 | Clytia hemisphaerica | exon |
| TCONS_00071652-exon-scaffold_63-1510915933:415297..415333 | TCONS_00071652-exon-scaffold_63-1510915933:415297..415333 | Clytia hemisphaerica | exon |
| TCONS_00071652-exon-scaffold_63-1575043694:415297..415333 | TCONS_00071652-exon-scaffold_63-1575043694:415297..415333 | Clytia hemisphaerica | exon |
| TCONS_00071652-exon-scaffold_63-1491911889:416044..417209 | TCONS_00071652-exon-scaffold_63-1491911889:416044..417209 | Clytia hemisphaerica | exon |
| TCONS_00071652-exon-scaffold_63-1510915933:416044..417209 | TCONS_00071652-exon-scaffold_63-1510915933:416044..417209 | Clytia hemisphaerica | exon |
| TCONS_00071652-exon-scaffold_63-1575043694:416044..417209 | TCONS_00071652-exon-scaffold_63-1575043694:416044..417209 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_63 | supercontig | scaffold_63:412084..417209 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
Blast
BLAST of TCONS_00071652 vs. Swiss-Prot (Human)
Match: WDR86 (WD repeat-containing protein 86 OS=Homo sapiens GN=WDR86 PE=2 SV=3) HSP 1 Score: 284.648 bits (727), Expect = 2.299e-87 Identity = 144/344 (41.86%), Postives = 205/344 (59.59%), Query Frame = 1
Query: 265 LKEIKEHTAGINSMTLTPDGSMLVSASEDANAHILDTTSEQTVSVLKGHEKYINSVVCNNDFVFTASADKMIRKWRIDTGMCSKTMRGHTCAVNRLMLVDSLLFSSSYDRSARCWHIDTGECLAVFNGHKLGVYPLLY-----IPQSDDSFERDITDLNNNHDILITGSADTTAKSWALNTNEVLLTYKGHNGAVLSMACDNSGKYLFTGSQDSTIRSYVLSTGKPVNVFSGHAASVLQLQVVNRLLFSSSADHTVRCWVYEFGECTRVYRGHTHTVGCMKVAKGLLLTGSGDDTAKIFDAKSGTNKRTFRGHIGSVNALVLHKHKLYTGSNDGAIRIWDASGI 1281
L+ +H GIN ++L+PDG L++ SED A + T Q ++L+GHE Y+ ++ FT SAD IR+W + TG C + RGHT VNR+++ ++ LFSSSYDR+AR W +D G+ F GH+ V L Y +P + + E L L+TGS D TAK W + + T +GH GAVL + D G FTGS D+TIR++ + +G+ + VF H SV+ L++VNRL++S SAD TV+CW+ + GEC R + H V +K G L TGSGD A+ FDA+SG +R FRGH +N + +H LYT S+DGA+R+WD G+
Sbjct: 8 LRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLEDEAAFTCSADCTIRRWDVLTGQCLQVYRGHTSIVNRILVANNQLFSSSYDRTARVWSVDKGQMSREFRGHRNCVLTLAYSAPWDLPSTPCAEEAAAGGL------LVTGSTDGTAKVWQVASGCCHQTLRGHTGAVLCLVLDTPGHTAFTGSTDATIRAWDILSGEQLRVFREHRGSVICLELVNRLVYSGSADRTVKCWLADTGECVRTFTAHRRNVSALKYHAGTLFTGSGDACARAFDAQSGELRRVFRGHTFIINCIQVHGQVLYTASHDGALRLWDVRGL 345
The following BLAST results are available for this feature:
|
