TCONS_00071639 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00071639
Unique Name	TCONS_00071639
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1794

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_63:184492..197258+

transcript sequence

>TCONS_00071639 ID=TCONS_00071639|Name=TCONS_00071639|organism=Clytia hemisphaerica|type=transcript|length=1794bp
gtttagatagaagtttttgaaatatttagaaAAGGATGGCTGatataaag
aaaacaaaaccaGAGAAGGATATTGAGTTGATTCAAAGGATTGGAAGTGG
AACTTATGGTGAAGTCTACAAGgcAAGATGGAAAGCTACAGGGGAAATGG
CTGCTGTGAAAATTATAAATATTGAGCCAGGTGATGATTTTGATATCATA
CAgcaagaaataaaaattatggAAGAATGTAAACATTTCAATATTGTTCA
ATACTTTGGAAGCTATTTACGGAGGGATAAGTTATGGATCGCTATGGAGT
TTTGTGGTGGTGGCTCTTTGCAAGATATTTAccatgTTACTGGTCCACTC
AACGAGCCTCAGATTGGAGCAGTATGCACGGAAATGCTTAAGGGGCTTGA
TTACATGCACAAACAACATAAATTACATAGAGATATCAAAGGAGCAAACA
TTTTGTTGACTTCTGAGGGTGATGTTAAACTAGCTGATTTTGGTGTTGGG
GCTCAAATCACATCAACGATGGGAAAACGTAATTCATTCATCGGGACTCC
TTATTGGATGGCACCTGAAGTAGCAGCAGTTGAGAGAACAGGGGGATACG
ACCATCTGTGTGATGTATGGGCAGTGGGGATAACAGCAATAGAACTGGCA
GAATGTCAACCACCACTATTTGAACTACATCCTATGCGTGCACTGTATTT
GATCTCCAAGAAAAACTATACACCACCCTCAGTAAAAGACAAAAGCAAAT
GGAGCTCTTCTATGAGAGAATTCATCAAACTTTCGTTAACAAAAAATCCA
AAGAAAAGACCAAGCTGTGAGAAACTACTGCAGCATGCATACTGTCAATC
ACGTCAAGTCAGGCGGGTACTGACAGAACTGCTTGACAAGTTTGATAAGT
TGAAACAGCAGAAGAAATATCGCTACAAAGAAGCCAACACTGATGAAGat
agtgaagaagaaaatgaaaagaatgagaaaaaagaaaataaccaaAACAA
CGAAAATAAGGATAAAAGAACAGTCAAACGGATCAAatctaaaaaagaca
aaaacagaaaagataAAGTCAATTTACCGGACAAGGACATGCAGCCGGTA
CAAAGAGAAACGGAACCCGAACGGAAGgcCACGATAAAAGCCAAACCACC
TCCACCTGTTCCAACACACagcTCTGAAGGACCACCAACGTTGACCGAAG
CACCAAAAAGAAACCTTCCACCACCACCTCCTTCACCTAAACAACGATCA
AGCTCGaatGGTGCTGCTGCTCGATCTTCTCCCAGTCCACCGCCTCCCCT
CCCACCACGCCCACCAGCAAATTCAACGCCATCAGATGACATGCCCACCA
TCAAAGCGCCCTCACAAGGAAAAGGAGCCGCCCCACCACCACCTTTACCG
CCAAGAGTTCCTACCGTGCACAAGAGGGAAAGGcCTCCATCACAGCTATT
CACACAAAGGGCTACGGCGAATtgcttttcaaagattttcaacgAATGTC
CATTAAATATCTCTGCCGCTACCAGTTGGACGCATCCAGAAACTAAAAAT
CATCATTTATTGTTTGCATCAAACGAAGGGATTTACAGCCTCAATTTGGA
TGATCTGCAAAATATAGAAATGTTTCAGATTTTTTCACGGCCATGCAGTT
GGGTGTACGTCATCAAGAATATATTGGTATCCATCTGTGGCTCTCCTGCA
CACGTCTACATGCACAATTTGTTGTCGCTTCATGGTCAGCAAAACATTGA
ACAGTTTTTACCAGTACCAAAGTAAGTTTAATAGTTGGTTCAGA

Run BLAST on NCBI

transcript from alignment at scaffold_63:184492..197258+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00071639 ID=TCONS_00071639|Name=TCONS_00071639|organism=Clytia hemisphaerica|type=transcript|length=12767bp|location=Sequence derived from alignment at scaffold_63:184492..197258+ (Clytia hemisphaerica)
gtttagatagaagtttttgaaatatttagaaAAGGATGGCTGatataaag
aaaacaaaaccaGAGAAGGATATTGAGTTGATTCAAAGGATTGGAAGTGG
AACTTATGGTGAAGTCTACAAGGTAAATACCAAAATATCCAGAGCGTTGT
GTGTACACCAGGTGTATAACTCAACAATTATAATTATAATGTGTATGTAT
GTCCCATTAAGCCAGAGTTGAACCTCAAGAATTATGACGAAGGTTTAAGT
TCTGTTAATAAGATTTCTGAAATTATGAATtgattcatttattttttagg
cAAGATGGAAAGCTACAGGGGAAATGGCTGCTGTGAAAATTATAAATATT
GAGCCAGGTacttttaaataacttttgaattAATTCGGCctgaacaattt
ttttactcTTGTCAGACAAATTGTTGGATGATAGtatatttgaaagtttg
aaagtatATGAAGGAAATTATACTGAAAGTATATTTCCTGGAAAATTTAC
GTTGGtgttaaattcttttgttctatATAGGTGATGATTTTGATATCATA
CAgcaagaaataaaaattatggAAGAATGTAAACATTTCAATATTGTTCA
ATACTTTGGAAGCTATTTACGGTGAGATGGTAACTTGCATGTAATTTACC
TTATTTCCTCTATTTAGCATTATTATCAGACGCGCGTATCTACTGAcatg
gttgattgattgatgatTGGCTGTACAATATTGTCaaatatatagcttcc
atggagAAAGCAGATTTATGagcttataaattggaattaaatttgaaaac
aagaaataaCTTGTCTGATATTTCTGTACCTGTACCCCATTGACCATAGA
CaagcaaaaaacaaaatttattgagatGAAGACGTTATACTTATGGACTT
GATTTGAAACGGATATAGGAACAGTAGAAATTACTACGTGGTCAATGTAA
CAACGCCAGTATAACCAAATCAGTCTTCTTTTatgactttgaaaaaataa
cagtCGATGAAATTATTTCGTACCCAACAAATTCTTATTCGCTTCTTTCC
TATCATAATGCTTTAACATATAATACAGATGAAGTGCAGGGAGTGATTAA
AGCTAAGAAATTGCGTAGCCTAAGTATCAgatttcaagttttcaaagata
aATTATTAATGAATTTGGAGCTGTGGTCCTGTTATCCTGCAGGATAATTT
GCAcccagaattaaaaaaaaaagttaaacaagGAAAATAACTGAAGCTAC
TTCCAGCTGAATGTAGTAGTCTTAAGTAACGTTAACGATCTTCTAAATTG
AAAAAGTAATCCAATATTGACAAATCAACCTATCCCTTCGATTTCCAGAC
GGAAAATGACTTAGTTTCCAATACTTTTCAGTTTCTTCTCCCGTTCCCCC
TCGTTTCCAAATCGTTTCCAAATCGTTTCCTATGCGTTTCCATTTCGTTT
CCACCCATTTCTCTGTCGTTTCCCCTCGTTTCCACGGCGTTTCACGTTTT
AGTAAGTacgataataaaccatttatttgggcgcagtctcatccaatatg
aaaaatattgaattcgactttgtccaataactgcttaaaataataaaatt
aacCTCACCTCAAAGAAAGAAGGATTGCACCTCATAGGGCTTGTTTAATT
TGTACAAGCATAATTTTCTCTATTTAGCACNGATTGCACCTCATAGGGCT
TATTTAATTTGTACAAGCATAATTTTCTCTATTTAGCACAATACTCCAAT
GATAACTGCACCTTAAATGAAAAGCATGTTGTTGTACAATCTTGTTTCAA
GCTAGTAGTACTGTAGTCAGACATCAATGGTTTATAATTATAATATATTT
ATTTCAGGAGGGATAAGTTATGGATCGCTATGGAGTTTTGTGGTGGTGGC
TCTTTGCAAGATATTTAccatggtaatttttttttaatttggattTGAAA
GTTGTTATAATTCAATTTGACAAACTGGTGAACACAGTGCTGTGCTGCAT
TggcctttaaacctactccTAACAACATCATGGCAAAACTTTAACTTCAA
ATTGATGTTATTTTgaactccccaagcgatttaaaTACCTGAAAACTGAA
CTTCTTTAGACGATCTTTTGAGGGTTGGTAAATGACCGGTAGAAATTTAC
CAAAAGGCTGCTACGAGTCTAGTTAATTTAGCTGCCGCTGTGAAGCATCC
GGTTCCAGACCGGCCCCAGACCAGCCCCGATCTCGCCCCGTGGACATTCA
CTAAAAATCACTAACTAGCAGTCTGGACCAATCTAACGAACAGACCGGAC
CGGTCTAACGCAGCCACAAGTCTCTAAAATCGGCCAGGACCGTTAGAGAT
CACATTTCTAGAAGGTCTGGAGGCCGATctaaaacaaatattttaccGCT
ACTAGACCGCTCTCGTCATACAGGACCAAGACCGGtctgattttcaggta
ctttaaatcgctttgGAAGTCACATTTATGTTTAAAAATTAACAATTCAT
TTTATTCTCTAAGTTACTGGTCCACTCAACGAGCCTCAGATTGGAGCAGT
ATGCACGGAAATGCTTAAGGTAGGTAGTAATTTAAATTTGGTGTTGCTTT
AAGGTATCACCTATTATTACTGTCTTGAATTATTTTTGACCTAAAGATTT
TGTCATTGAATGTCATGTGTCTTATCAAGAATTGTCACCCCAAAATGAAT
ATTTTGTCAGCCCTAGGGATATAATGTTATAgtaatttcccaaaaaatat
ttattaaaggATATCAATAGGATAGCGTATCTACTGGCATTTTGCATACA
CATCATTCTGACATCTAATCTAGCCTTATCAAAACTGGCTGCTTAAAATA
CATCTTTTATCCATGTCGGTTGAAATGAAAACTCATGAAACTCCTTTTGT
TATCACAGttcatggcttggcagcaggttttaggtgacccctaagaattc
aggtgacccctaagatttaggtaacccctggttgccaaatatttttggtg
acccctaagccaatgacaagtcaatttttttcgaaaatccttctcaaacc
accaaacaaatacaacagttagtttaggttattgctaaatagaataaacG
CCCTAAGAAATTAGAGGTAAGCTAAGTACTGAAGGTTCATGCTagattat
caaggttttgtaagtcagAGTGCAGATCCCTTGCCAGACAGatttttatc
taagtaaatgcaaggggggctgaagtttagtgacaccgcaaGGGCCAACC
ATGGCTTGGCCCaaggggaaaaattttgaaaatttgagctctagattgct
tgaaaatgcactcaaagcATGCACTTatagacaattatgacaaatttaaa
aagaaaaactttgcaaaataacccccttgcccccccccatgctacggcac
tgcagataatatattagataccaaattgtcagtttttgagcattgcttag
attaaaatataagatgagAAAGTNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNCCCCCCCCCCTCAGGCCAGGGGGGATTCCAGCC
ATGCAGTTCAAACATAATTTTTAACTAGATACTTTCTAAGGCTGATTtta
ttagttacacggtcttcttgaggtgggatacgggatatacagggtcagta
aaaactTTATTGGTAACAAGACTTACCGAGTCGCAATACAATTTTTACTG
ATCCCTAGCGCTACAAAGTAAATCGAAGTGTGAAAGTGGGATCAGTGAAA
GTGACATTTTAATCTCAAGAAAAGTAAAATCAGAATAACCTTAAGAATTT
TCTGTTTGTTGACTTTCTCAACCCCAACCATTTCAATTtcgaaatttcat
tttcatttttaaacgaaACATTTGAAAGCGCCTTCGCCAATATGCAatat
cttctttcttttctcaATTGAATGCGAGTGAGACAGGATACGTACCTCCA
TGTAatgtcttttgaccaatgaaatcgctagaatcttactgatgcggAAT
AACATTAAATATATTATTTCTTTTCAGGGGCTTGATTACATGCACAAACA
ACATAAATTACATAGAGATATCAAAGGAGCAAACATTTTGTTGACTTCTG
AGGGTGATGTTAAACTAGGTATAAATCATTATagttattattttcaaaag
gaTCACATAATATTAATTTAATAAATAACTTTTAATGCTCTTTGTTTTTG
TAAGAGTGATAAACACTGGGCCCTACATAAAGAACGTTCATTTTTTTAGT
TGTTAATTAAGTTGTTTTTCACCTATAGCTGATTTTGGTGTTGGGGCTCA
AATCACATCAACGATGGGAAAACGTAATTCATTCATCGGGACTCCTTATT
GGTAAGATCAGATTTAGATTTTTTGATTAAAATCACTCTTCTAAAAGTAA
GTGttgtgattttgtgattttgtaaCTTCTCAAAAACTTTGAGGCAACAC
CCAGGTTTCCCGAGATTTCTCTGCTTGTCTTGATCCTTCTAGATCGCAAT
TATTAGGAAGATGTAAGACCCATTATCTCATAAATTAATGTTGAAATTCT
CTTGTTGAAGTTCTCAACAGTTATTGTGTTAAGGTCAATCTTTTGTGTCA
ATAAAAACTATTTGCTAAATAGCAGGAAAAGccactaaaattaaaaaagg
ctAAGCTTTTTCTTAGTATCTGGGataatttgaaatgaattaaaagttat
ttttctgTGATATCATGACAGGATGGCACCTGAAGTAGCAGCAGTTGAGA
GAACAGGGGGATACGACCATCTGGTAGGTTTTCATTTAATACTTAAGCTT
TTGAGGCCTTGATgagttcttaaccttttttaatttaaaagccttaaaat
attctcaaaattgtttttcatttcagaCTCTTGAGAGTATTTTGGTGTGA
GTTCCTAAGAAATCAAACGTTTTAGGGTCTTTGAAACCTTTGAAacaatt
tcttcaaattttttgaagccctATTCTTCATATACTTTGGTCTTGTTAAT
AATGTGAAGGGATCTAGATGCTCATTTCATGTTTTTGTTAGTCTTCTCAT
AAAATGATGcttcttaaatattttttaactttCAAAGTGTGATGTATGGG
CAGTGGGGATAACAGCAATAGAACTGGCAGAATGTCAACCACCACTATTT
GAACTACATCCTATGCGGTATGTTTAAACAACAAAGCCAACCAAACCACC
TGACTGAGAGGGGGTTACTTGGTTTGTGGGATGTCCGAGTcaaagttcaa
attttcaaatattttcataaaatttttgaCCCTTAGAGTAAAGTGGTCGA
AATATTAAGATATCTACCGATTGGCCTAAATGCAATTTTTGgcgggattt
aatttggtgatagatcaatttcataaaacttggcggggatttaatttggc
aaattggaaattttgaaacaaggaaacgggtgaaaattactcaaaaatat
actaaaaagttatggtctttcacataattctctttttgttaaatttggtg
gggatttaatttggcggggatttaatttggcgaattgccgaatttggaaa
ttttggcgaggatttaatttcgtgaattttggcaaaataatAAAGTTACA
TGAGAGCATGAGACTTTGCACAAAtgtagtttaggggtcaaaatttgatt
taaatctcagacccaaaaaattggcaccactctgtttgtgtattttacag
accagaacaggTTCCCAGgcttaaattaattttttttctccaaagtatgc
cctgttacataccgttggaaagcatttttcaagctcatttataaaaacat
tatatatgagaatgaagccaataaaagttattaaATTGCTTAGTAATTGC
TGACTGACAAAAATTCGAGCACTCTCTTTcgacgagcacaaaaccgctat
ctaattcgaattctatcaaaagtggctgttttttgtctccgctgaaaATT
ATATTGAGGCAGActttataacaaaataaaggTTATGATTATAGCAGAta
ttaaaacacttttttttgacacttttagGTAAAGAAACTAAGTAATTAAG
AACATCGTGAGAACATGATAAGCCTGATATATtcagaaaattaagaacag
cccagcctgagctgAAATTTACTGATTTTTATAAATGTATCTGGTTTGTT
TCACTTTTATGTCATAATTGACTGGATGACCTATCTTATATCACTATTAT
TTTAGTAAATTCTTGTTATAGTGCACTGTATTTGATCTCCAAGAAAAACT
ATACACCACCCTCAGTAAAAGACAAAAGCAAATGGTAATATAATATTACT
ATCATTAACATCATTGAGGTGTTTTCAAAGGACAGTTAATTTCTTTTACN
TTAGTGCACTGTATTTGATATCCAAGAAAAACTATACACCACCCTCAGTA
AAAGACAAAAGCAAATGGTAATATAATATTACTATCATTAACATCATTGA
GGTGTTTTCAAAGGACAGTTAATTTCTTTTACATGATTTtaatctgaaag
ttttttttcaggcCTAATATCCTATTTCCTAGTCCAGTTCCAAATTACTA
AGTAGTGTTCCAGGATTCTATATCAAATTAACCTCTCTCTTGTCTTTGTA
GGAGCTCTTCTATGAGAGAATTCATCAAACTTTCGTTAACAAAAAATCCA
AAGAAAAGACCAAGCTGTGAGAAACTACTGCAGGTGGGGATTTTGATGTC
TGCACAAACTTGTCTGACCTTGATAGAAATATTACCAGTCAAGCTACAAT
TTCAATCTAGGTCcgaatagtgtttttttttaaagttacacATTTGCCAT
CTGCACATGGAATTTTTCTAACTGGGATTTACATcctgttttttaagaaa
aaaaagtcaACAATTATTCCAAAATTGGGTTGGAGCCCTTTGCCAAAGTT
GGTTATAGCACTTTTAATCAAAGACCGCCAATAATCTGCAATAATATTTA
AACTTCACTCGGTATAACAATCTGTGATCTTAAGAATCCTGTCTTTGTAT
ACAGCATGCATACTGTCAATCACGTCAAGTCAGGCGGGTACTGACAGAAC
TGCTTGACAAGTTTGATAAGTTGAAACAGCAGAAGAAATATCGCTACAAA
GAAGCCAACACTGATGAAGatagtgaagaagaaaatgaaaagaatgagaa
aaaagaaaataaccaaAACAACGAAAATAAGGTATAATTCACTGAGCTAA
ATAAACCCTGGGGAAAGTTTCTTGTAATCCAAGctaggaaaatcttttaa
tCGGGTTTTTGTAGTGTACGCTAATGGCACCAATAGTAACATTATTCAAA
AGCAGTGTATTGCATCGAGAGATGCTAGATTTACTTTTCATTGAATACTT
GTTTTTTTGCCttgccctaaaaataagaacagagtGTAACTGTAAGAACA
TTTTGatgctcaaagtgccaaaaaataacaACAGCTGAGCCTGAACAAAA
CTTTACTGGTTCTTAATGTCAATTccttttctattgttctttaccaaatt
tcttaaaataaatACGAAAATTTCCCTGCAGGATAAAAGAACAGTCAAAC
GGATCAAatctaaaaaagacaaaaacagaaaagataAAGTCAATTGTAag
tattttgacaattttctgaACTGTTATGTTACTACGTTACGTAGGAAATT
ATTATGTATCATTTGACATAACGACATTTGACAGAACATATACTCCACAG
TATAGCTAACTCCTCATAGTTCCATTTGGGCTTGTAACGCCTCCTAAGTT
CCCCATTTCTCTGTTAGACGTTGTTTAGGTTACACACtattatttattat
tgtttATGCACTAAATGTCTCCCTAAAGTTGATGCGTCTTGGGATGTGGT
AGGCTCTAACTATCTAGATTCTAGAAGatgttttttgaaatcttccAGAA
GTAACTTGCCCTGACAGCCAAATTAAATTTActtgattttctgatttatt
tAGTACCGGACAAGGACATGCAGCCGGTACAAAGAGAAACGGAACCCGAA
CGGAAGGTACGATTTCCCTCGTTATTTCCCTCTGGTATAGAACTTTTATA
CTGATGAGAAAAATTATATGCGTGTCTCTGCCCAAAACGTCTGAGATTTC
TATTTCTATCATGTCTAGTAGACTGTAGTCGTTTATATAGTCCATGTAAA
ATAATAATACGGGTGTTATAATGATAAGATGATAGTTGCTATGGGTTGAA
TGAACTACAATTTGTTCCATCAatgattttttgcttattttctgTTATGT
CTAATCACTAAAATTGGTTTTTAAACAATTAAACAGATTATTAACTAGCT
GCCCGTGCTTCAACACCTCGAGCTGACTAATTACTTCCCTTCAGATCAAC
GTAATTTCACTTGCAAAGTGTACTGTCACATGATCATTGAGCATTCCATT
TTTCATATGAAGGTGGCGTTGACACCAACTACGTTTCTACTACAGTTTAT
ATAGAGTAACTCCTAACttgattttatttgttttcaattttcaggcCACG
ATAAAAGCCAAACCACCTCCACCTGTTCCAACACACaggttttttcttct
tctttccatcataatttttttatatcgacaatatattgaaaaggtgtccg
NTTTCTTTCcatcacaatttttttatattggAGAATTTcataagggctac
atacactacacaatatattgtcaggcaatatattgatgatatattgctga
atgtcgacaatatattgaaaaggtgtccgcaatatattgtcagctcgatt
tgcaatattccaacaataaagggggattgtttacagaaagaaaattcctt
tttataatagagtataccagttgtttacttcgtacattacggtccgcaaa
ccatattgtcgaatattgttcgtcaatatattgtgtagtctaagtagccc
tatAGGATAACGCAGACAGAACAATACAAATTTAATTGATTTGAGTTTTG
GTCCTTATTTATTAGATCTATAATAGATTTAGATGACGATTGTAGAAATT
GACTCTAAAACTTATACTAAAGAGCGTCTACCACAACAGAAAGTTTTCGT
TTTGCATACAACTTAAttaattttgtttcaaatttctttttagcTCTGAA
GGACCACCAACGTTGACCGAAGCACCAAAAAGAAACCTTCCACCACCACC
TCCTTCACCTAAACAACGATCAAGCTCGGTAAACTACTACTGAATCAATG
ATCTTAGCTCTCGATCTGGCCACTTTGCTACAGTCGACGCTTTTTTTTAt
ccgataatattgaaagtcaccatcaagaaaaaaactcataaacgacgcca
attttccttgaaaactaGACCAGAAAGCGTCAACTTTAATTGAATGCTAA
CTCGGcactgagctttatataaacCTTGCAGGAAGTTTCTTAATTTCGGC
CAACCAAAATCTCGATCTAAGTTTTTCGAAAGTGGTACTAGCGTTGTATA
TGCATCGAGAGTGCTAGTCTACTTTTCCTTGAACACTTTTAATGATGTGG
CGCCGTTAGACGTTGAATCTTTTATACTGccatggcttctttgcgggtat
cATACGATTAAGATGATAACGTGCCTTCGTATGCCTCTAAGCTCTTATTT
AGACAACAGAGTTTTGTATGAGCTCCTTTAATGtaagagaaaaaatgaag
agATTGAGCACTCCCTTTGTTTTTCAAGTTTAATGAGAACAgaactgttt
ggaaaatgtaaaacctttttttgtCTGTAAGAAGTTTAGGCAGAGATGAA
ACCGCATTTAAaagtaatgaaaaataaatcagcCAATAAAAAACTCATTC
AAACTTGAAATAAACCACAGCAGTTTAttaaatcttttggtttttaagaa
gggtgtttattcgagggggttTTTAAAAGAAGGTGGGTTTTTCGAAGTAA
TTTGGTATGAGGACAGTTATATAAACTCTGAACTcatcaatttcaaattc
aaatttttttatagaatGGTGCTGCTGCTCGATCTTCTCCCAGTCCACCG
CCTCCCCTCCCACCACGCCCACCAGCAAATTCAACGCCATCAGATGACAT
GCCCACCATCAAAGCGCCCTCACAAGGAAAAGGAGCCGCCCCACCACCAC
CTTTACCGCCAAGAGTTCCTACCGTGCACAAGAGGGAAAGGGTAAGATTT
GTTATAGTTTTTTTAGTATGCACACTTTTCGTAGAAATTTTGTGGCttat
attgggctcttccagaaaaaaatccgtCATGGGGGAGGGGTGGATGATGA
ATGGTCCCAAAAAAAGTCCTAAAATTTGCATTGTCAAGGGTGTAAATCTG
AGATGTCCGGGGGTAAACTTTGGTGTCCTTAAATTGATGATTGCCGATTG
GTATAACCCATGTTCATGGGGTGAAAAATGGAAATGTTCAGGGCTAAAGC
ATTGAAAAATAATACAtccattttttttgcaaagattGACGAAACTGAAG
TTTTCTTCGCCATCAATATCATACCAAATTCAAATTcgtctatttttcat
ttttcttagcCTCCATCACAGCTATTCACACAAAGGGCTACGGTATGTTA
TATCTAGATGATTGTTTTAGTTTCTTAATTTCTTTGATCAATACAAGAAA
AAAATAGACAATCGCTATCAAAAAAATGAATAGCCATAAGAATTTGAATC
AAATTACAATATTCATTCTCATTTTTCTATCATAAGTAGAAAAATCGCTA
ATAACGATATCCTAACTAACGACTCCTACCATTTCCTATCAGTGTTTGTA
ACTTCGTGATTTCATGTTTTCATATTTCAGGCGAATtgcttttcaaagat
tttcaacgAATGTCCATTAAATATCTCTGCCGCTACCAGTTGGACGCATC
CAGAAACTAAAAGTAAGCTTGTCAATCGTCTAAAAAGTCACTAGATCTTT
AGGAAACTGTTTAATGAAGACTTCACTCTATTTGATTTACTTGATTGGGC
ATCCTCTCTGAAGCGTGTCTCGTGAGCAAGAAATCGGCCTGTTGTTCCCA
TTATAAAAGTGTCGGCATTCAGGGATTGAAAGCTGACGTTCGAAAATCAA
ATGTAACTAATTCTACAAGCAATCTGGANTGGCttatattgggctcttcc
agaaaaaaatccgtCATGGGGGAGGGGTGGATGATGAATGGTCCCAAAAA
AAGTCCTAAAATTTGCATTGTCAAGGGTGTAAATCTGAGATGTCCGGGGG
TAAACTTTGGTGTCCTTAAATTGATGATTGCCGATTGGTATAACCCATGT
TCATGGGGTGAAAAATGGAAATGTTCAGGGGTAAAGCATTGAAAAATAAT
ACAtccattttttttgcaaagattGACGAAACTGAAGTTTTCTTCGCCAT
CAATATCATACCAAATTCAAATTcgtctatttttcatttttcttagcCTC
CATCACAGCTATTCACACAAAGGGCTACGGTATGTTATATCTAGATGATT
GTTTTAGTTTCTTAATTTCTTTGATCAATACAAGAAAAAAATAGACAATC
GCTATCAAAAAAATGAATAGCCATAAGAATTTGAATCAAATTACAATATT
CATTCTCATTTTTCTATCATAAGTAGAAAAATCGCTAATAACGATATCCT
AACTAACGACTCCTACCATTTCCTATCAGTGTTTGTAACTTCGTGATTTC
ATGTTTTCATATTTCAGGCGAATtgcttttcaaagattttcaacgAATGT
CCATTAAATATCTCTGCCGCTACCAGTTGGACGCATCCAGAAACTAAAAG
TAAGCTTGTCAATCGTCTAAAAAGTCACTAGATCTTTAGGAAACTGTTTA
ATGAAGACTTCACTCTATTTGATTTACTTGATTGGGCATCCTCTCTGAAG
CGTGTCTCGTGAGCAAGAAATCGGCCTGTTGTTCCCATTATAAAAGTGTC
GGCATTCAGGGATTGAAAGCTGACGTTCGAAAATCAAATGTAACTAATTC
TACAAGCAATCTGGAGAAACACTCAGAAGAAAGATTATCATTGCGTTTAA
GTCTAAGGAGTTAGCGTTGTGGAGCAATCCAAGGATAAAGCTACAAAGCT
TTCGAAAGATGAGCCTTGGGGTCGCCTCCGAAGACTTATTGCAGACTTCT
ACAAGCCTATAGGTTACCTACTTCGTGTGTAGATTAGTTGGATGGATTAt
tgttgttaatttttttagcTCTACGCCTCTCTCTTTTCAGATCATCATTT
ATTGTTTGCATCAAACGAAGGGATTTACAGCCTCAATTTGGATGATCTGC
AAAATATAGAAATGTTTCAGGTGTGTTTTTCTTCTGTTTGCAGTCTGTAG
TAGATAGCCATCTTCAaatatgattttaaaattttatgtacGACCCAAGA
CCTTGGGCACCGTTTTACGGTTtttaatttcatgttttatcTTTACCGTA
GATTTTTTCACGGCCATGCAGTTGGGTGTACGTCATCAAGAATATATTGG
TATCCATCTGTGGCTCTCCTGCACACGTCTACATGCACAATTTGTTGTCG
CTTCATGGTCAGCAAAACATTGAACAGTTTTTACCAGTACCAAAGTAAGT
TTAATAGTTGGTTCAGA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_044513	XLOC_044513	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_63	supercontig	scaffold_63:184492..197258 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.47458	4.44187	4.75194	4.98376	12.698	9.81147	13.6117	14.7907	10.1761	15.0219	12.7787	6.18651	11.1202	8.7116	9.59609	11.7985	16.4587	17.2141	11.2665	14.4538	15.1166	14.3773	11.703	14.7346	11.1349	11.0744	35.1271	27.531	19.5894	19.8446

Blast

[Close]

BLAST of TCONS_00071639 vs. Swiss-Prot (Human)
Match: M4K5 (Mitogen-activated protein kinase kinase kinase kinase 5 OS=Homo sapiens GN=MAP4K5 PE=1 SV=1)

HSP 1 Score: 422.935 bits (1086), Expect = 1.076e-136
Identity = 191/278 (68.71%), Postives = 231/278 (83.09%), Query Frame = 3

Query:   39 ADIKKTKPEKDIELIQRIGSGTYGEVYKARWKATGEMAAVKIINIEPGDDFDIIQQEIKIMEECKHFNIVQYFGSYLRRDKLWIAMEFCGGGSLQDIYHVTGPLNEPQIGAVCTEMLKGLDYMHKQHKLHRDIKGANILLTSEGDVKLADFGVGAQITSTMGKRNSFIGTPYWMAPEVAAVERTGGYDHLCDVWAVGITAIELAECQPPLFELHPMRALYLISKKNYTPPSVKDKSKWSSSMREFIKLSLTKNPKKRPSCEKLLQHAYCQSRQVRRVL 872
            ADI +  P++D EL+QR+GSGTYG+VYKAR   TGE+AAVKII +EPGDDF +IQQEI +++ECKH NIV YFGSYL R+KLWI ME+CGGGSLQDIYHVTGPL+E QI  VC E L+GL Y+H + K+HRDIKGANILLT  GDVKLADFGV A+IT+T+ KR SFIGTPYWMAPEVAAVE+ GGY+ LCD+WAVGITAIEL E QPP+F+LHPMRAL+L+SK N+ PP +KDK+KWSS+   F+K++LTKNPKKRP+ E+LL H +     + R L
Sbjct:    9 ADILRRNPQQDYELVQRVGSGTYGDVYKARNVHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHTKGKMHRDIKGANILLTDHGDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELGELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKIALTKNPKKRPTAERLLTHTFVAQPGLSRAL 286

HSP 2 Score: 104.375 bits (259), Expect = 4.121e-23
Identity = 43/87 (49.43%), Postives = 64/87 (73.56%), Query Frame = 3

Query: 1473 CFSKIFNECPLNISAATSWTHPETKNHHLLFASNEGIYSLNLDDLQNIEMFQIFSRPCSWVYVIKNILVSIC-GSPAHVYMHNLLSL 1730
            CFSK+F+ CPL I+ ATSW HP+TK+ +++F + +GIY+LNL++L    M Q+F R C+W+YVI N L+S+  G    +Y HNL++L
Sbjct:  497 CFSKVFDGCPLKINCATSWIHPDTKDQYIIFGTEDGIYTLNLNELHEATMEQLFPRKCTWLYVINNTLMSLSEGKTFQLYSHNLIAL 583

The following BLAST results are available for this feature:

BLAST of TCONS_00071639 vs. Swiss-Prot (Human)

BLAST of TCONS_00071639 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
M4K5	1.076e-136	68.71	Mitogen-activated protein kinase kinase kinase kin...	[more]

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TCONS_00071639 (transcript) - C. hemisphaerica