TCONS_00071636 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071636
Unique NameTCONS_00071636
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1794

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071636 ID=TCONS_00071636|Name=TCONS_00071636|organism=Clytia hemisphaerica|type=transcript|length=1794bp
gtttagatagaagtttttgaaatatttagaaAAGGATGGCTGatataaag
aaaacaaaaccaGAGAAGGATATTGAGTTGATTCAAAGGATTGGAAGTGG
AACTTATGGTGAAGTCTACAAGgcAAGATGGAAAGCTACAGGGGAAATGG
CTGCTGTGAAAATTATAAATATTGAGCCAGGTGATGATTTTGATATCATA
CAgcaagaaataaaaattatggAAGAATGTAAACATTTCAATATTGTTCA
ATACTTTGGAAGCTATTTACGGAGGGATAAGTTATGGATCGCTATGGAGT
TTTGTGGTGGTGGCTCTTTGCAAGATATTTAccatgTTACTGGTCCACTC
AACGAGCCTCAGATTGGAGCAGTATGCACGGAAATGCTTAAGGGGCTTGA
TTACATGCACAAACAACATAAATTACATAGAGATATCAAAGGAGCAAACA
TTTTGTTGACTTCTGAGGGTGATGTTAAACTAGCTGATTTTGGTGTTGGG
GCTCAAATCACATCAACGATGGGAAAACGTAATTCATTCATCGGGACTCC
TTATTGGATGGCACCTGAAGTAGCAGCAGTTGAGAGAACAGGGGGATACG
ACCATCTGTGTGATGTATGGGCAGTGGGGATAACAGCAATAGAACTGGCA
GAATGTCAACCACCACTATTTGAACTACATCCTATGCGTGCACTGTATTT
GATATCCAAGAAAAACTATACACCACCCTCAGTAAAAGACAAAAGCAAAT
GGAGCTCTTCTATGAGAGAATTCATCAAACTTTCGTTAACAAAAAATCCA
AAGAAAAGACCAAGCTGTGAGAAACTACTGCAGCATGCATACTGTCAATC
ACGTCAAGTCAGGCGGGTACTGACAGAACTGCTTGACAAGTTTGATAAGT
TGAAACAGCAGAAGAAATATCGCTACAAAGAAGCCAACACTGATGAAGat
agtgaagaagaaaatgaaaagaatgagaaaaaagaaaataaccaaAACAA
CGAAAATAAGGATAAAAGAACAGTCAAACGGATCAAatctaaaaaagaca
aaaacagaaaagataAAGTCAATTTACCGGACAAGGACATGCAGCCGGTA
CAAAGAGAAACGGAACCCGAACGGAAGgcCACGATAAAAGCCAAACCACC
TCCACCTGTTCCAACACACagcTCTGAAGGACCACCAACGTTGACCGAAG
CACCAAAAAGAAACCTTCCACCACCACCTCCTTCACCTAAACAACGATCA
AGCTCGaatGGTGCTGCTGCTCGATCTTCTCCCAGTCCACCGCCTCCCCT
CCCACCACGCCCACCAGCAAATTCAACGCCATCAGATGACATGCCCACCA
TCAAAGCGCCCTCACAAGGAAAAGGAGCCGCCCCACCACCACCTTTACCG
CCAAGAGTTCCTACCGTGCACAAGAGGGAAAGGcCTCCATCACAGCTATT
CACACAAAGGGCTACGGCGAATtgcttttcaaagattttcaacgAATGTC
CATTAAATATCTCTGCCGCTACCAGTTGGACGCATCCAGAAACTAAAAAT
CATCATTTATTGTTTGCATCAAACGAAGGGATTTACAGCCTCAATTTGGA
TGATCTGCAAAATATAGAAATGTTTCAGATTTTTTCACGGCCATGCAGTT
GGGTGTACGTCATCAAGAATATATTGGTATCCATCTGTGGCTCTCCTGCA
CACGTCTACATGCACAATTTGTTGTCGCTTCATGGTCAGCAAAACATTGA
ACAGTTTTTACCAGTACCAAAGTAAGTTTAATAGTTGGTTCAGA
Run BLAST on NCBI

transcript from alignment at scaffold_63:184492..197258+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071636 ID=TCONS_00071636|Name=TCONS_00071636|organism=Clytia hemisphaerica|type=transcript|length=12767bp|location=Sequence derived from alignment at scaffold_63:184492..197258+ (Clytia hemisphaerica)
gtttagatagaagtttttgaaatatttagaaAAGGATGGCTGatataaag aaaacaaaaccaGAGAAGGATATTGAGTTGATTCAAAGGATTGGAAGTGG AACTTATGGTGAAGTCTACAAGGTAAATACCAAAATATCCAGAGCGTTGT GTGTACACCAGGTGTATAACTCAACAATTATAATTATAATGTGTATGTAT GTCCCATTAAGCCAGAGTTGAACCTCAAGAATTATGACGAAGGTTTAAGT TCTGTTAATAAGATTTCTGAAATTATGAATtgattcatttattttttagg cAAGATGGAAAGCTACAGGGGAAATGGCTGCTGTGAAAATTATAAATATT GAGCCAGGTacttttaaataacttttgaattAATTCGGCctgaacaattt ttttactcTTGTCAGACAAATTGTTGGATGATAGtatatttgaaagtttg aaagtatATGAAGGAAATTATACTGAAAGTATATTTCCTGGAAAATTTAC GTTGGtgttaaattcttttgttctatATAGGTGATGATTTTGATATCATA CAgcaagaaataaaaattatggAAGAATGTAAACATTTCAATATTGTTCA ATACTTTGGAAGCTATTTACGGTGAGATGGTAACTTGCATGTAATTTACC TTATTTCCTCTATTTAGCATTATTATCAGACGCGCGTATCTACTGAcatg gttgattgattgatgatTGGCTGTACAATATTGTCaaatatatagcttcc atggagAAAGCAGATTTATGagcttataaattggaattaaatttgaaaac aagaaataaCTTGTCTGATATTTCTGTACCTGTACCCCATTGACCATAGA CaagcaaaaaacaaaatttattgagatGAAGACGTTATACTTATGGACTT GATTTGAAACGGATATAGGAACAGTAGAAATTACTACGTGGTCAATGTAA CAACGCCAGTATAACCAAATCAGTCTTCTTTTatgactttgaaaaaataa cagtCGATGAAATTATTTCGTACCCAACAAATTCTTATTCGCTTCTTTCC TATCATAATGCTTTAACATATAATACAGATGAAGTGCAGGGAGTGATTAA AGCTAAGAAATTGCGTAGCCTAAGTATCAgatttcaagttttcaaagata aATTATTAATGAATTTGGAGCTGTGGTCCTGTTATCCTGCAGGATAATTT GCAcccagaattaaaaaaaaaagttaaacaagGAAAATAACTGAAGCTAC TTCCAGCTGAATGTAGTAGTCTTAAGTAACGTTAACGATCTTCTAAATTG AAAAAGTAATCCAATATTGACAAATCAACCTATCCCTTCGATTTCCAGAC GGAAAATGACTTAGTTTCCAATACTTTTCAGTTTCTTCTCCCGTTCCCCC TCGTTTCCAAATCGTTTCCAAATCGTTTCCTATGCGTTTCCATTTCGTTT CCACCCATTTCTCTGTCGTTTCCCCTCGTTTCCACGGCGTTTCACGTTTT AGTAAGTacgataataaaccatttatttgggcgcagtctcatccaatatg aaaaatattgaattcgactttgtccaataactgcttaaaataataaaatt aacCTCACCTCAAAGAAAGAAGGATTGCACCTCATAGGGCTTGTTTAATT TGTACAAGCATAATTTTCTCTATTTAGCACNGATTGCACCTCATAGGGCT TATTTAATTTGTACAAGCATAATTTTCTCTATTTAGCACAATACTCCAAT GATAACTGCACCTTAAATGAAAAGCATGTTGTTGTACAATCTTGTTTCAA GCTAGTAGTACTGTAGTCAGACATCAATGGTTTATAATTATAATATATTT ATTTCAGGAGGGATAAGTTATGGATCGCTATGGAGTTTTGTGGTGGTGGC TCTTTGCAAGATATTTAccatggtaatttttttttaatttggattTGAAA GTTGTTATAATTCAATTTGACAAACTGGTGAACACAGTGCTGTGCTGCAT TggcctttaaacctactccTAACAACATCATGGCAAAACTTTAACTTCAA ATTGATGTTATTTTgaactccccaagcgatttaaaTACCTGAAAACTGAA CTTCTTTAGACGATCTTTTGAGGGTTGGTAAATGACCGGTAGAAATTTAC CAAAAGGCTGCTACGAGTCTAGTTAATTTAGCTGCCGCTGTGAAGCATCC GGTTCCAGACCGGCCCCAGACCAGCCCCGATCTCGCCCCGTGGACATTCA CTAAAAATCACTAACTAGCAGTCTGGACCAATCTAACGAACAGACCGGAC CGGTCTAACGCAGCCACAAGTCTCTAAAATCGGCCAGGACCGTTAGAGAT CACATTTCTAGAAGGTCTGGAGGCCGATctaaaacaaatattttaccGCT ACTAGACCGCTCTCGTCATACAGGACCAAGACCGGtctgattttcaggta ctttaaatcgctttgGAAGTCACATTTATGTTTAAAAATTAACAATTCAT TTTATTCTCTAAGTTACTGGTCCACTCAACGAGCCTCAGATTGGAGCAGT ATGCACGGAAATGCTTAAGGTAGGTAGTAATTTAAATTTGGTGTTGCTTT AAGGTATCACCTATTATTACTGTCTTGAATTATTTTTGACCTAAAGATTT TGTCATTGAATGTCATGTGTCTTATCAAGAATTGTCACCCCAAAATGAAT ATTTTGTCAGCCCTAGGGATATAATGTTATAgtaatttcccaaaaaatat ttattaaaggATATCAATAGGATAGCGTATCTACTGGCATTTTGCATACA CATCATTCTGACATCTAATCTAGCCTTATCAAAACTGGCTGCTTAAAATA CATCTTTTATCCATGTCGGTTGAAATGAAAACTCATGAAACTCCTTTTGT TATCACAGttcatggcttggcagcaggttttaggtgacccctaagaattc aggtgacccctaagatttaggtaacccctggttgccaaatatttttggtg acccctaagccaatgacaagtcaatttttttcgaaaatccttctcaaacc accaaacaaatacaacagttagtttaggttattgctaaatagaataaacG CCCTAAGAAATTAGAGGTAAGCTAAGTACTGAAGGTTCATGCTagattat caaggttttgtaagtcagAGTGCAGATCCCTTGCCAGACAGatttttatc taagtaaatgcaaggggggctgaagtttagtgacaccgcaaGGGCCAACC ATGGCTTGGCCCaaggggaaaaattttgaaaatttgagctctagattgct tgaaaatgcactcaaagcATGCACTTatagacaattatgacaaatttaaa aagaaaaactttgcaaaataacccccttgcccccccccatgctacggcac tgcagataatatattagataccaaattgtcagtttttgagcattgcttag attaaaatataagatgagAAAGTNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNCCCCCCCCCCTCAGGCCAGGGGGGATTCCAGCC ATGCAGTTCAAACATAATTTTTAACTAGATACTTTCTAAGGCTGATTtta ttagttacacggtcttcttgaggtgggatacgggatatacagggtcagta aaaactTTATTGGTAACAAGACTTACCGAGTCGCAATACAATTTTTACTG ATCCCTAGCGCTACAAAGTAAATCGAAGTGTGAAAGTGGGATCAGTGAAA GTGACATTTTAATCTCAAGAAAAGTAAAATCAGAATAACCTTAAGAATTT TCTGTTTGTTGACTTTCTCAACCCCAACCATTTCAATTtcgaaatttcat tttcatttttaaacgaaACATTTGAAAGCGCCTTCGCCAATATGCAatat cttctttcttttctcaATTGAATGCGAGTGAGACAGGATACGTACCTCCA TGTAatgtcttttgaccaatgaaatcgctagaatcttactgatgcggAAT AACATTAAATATATTATTTCTTTTCAGGGGCTTGATTACATGCACAAACA ACATAAATTACATAGAGATATCAAAGGAGCAAACATTTTGTTGACTTCTG AGGGTGATGTTAAACTAGGTATAAATCATTATagttattattttcaaaag gaTCACATAATATTAATTTAATAAATAACTTTTAATGCTCTTTGTTTTTG TAAGAGTGATAAACACTGGGCCCTACATAAAGAACGTTCATTTTTTTAGT TGTTAATTAAGTTGTTTTTCACCTATAGCTGATTTTGGTGTTGGGGCTCA AATCACATCAACGATGGGAAAACGTAATTCATTCATCGGGACTCCTTATT GGTAAGATCAGATTTAGATTTTTTGATTAAAATCACTCTTCTAAAAGTAA GTGttgtgattttgtgattttgtaaCTTCTCAAAAACTTTGAGGCAACAC CCAGGTTTCCCGAGATTTCTCTGCTTGTCTTGATCCTTCTAGATCGCAAT TATTAGGAAGATGTAAGACCCATTATCTCATAAATTAATGTTGAAATTCT CTTGTTGAAGTTCTCAACAGTTATTGTGTTAAGGTCAATCTTTTGTGTCA ATAAAAACTATTTGCTAAATAGCAGGAAAAGccactaaaattaaaaaagg ctAAGCTTTTTCTTAGTATCTGGGataatttgaaatgaattaaaagttat ttttctgTGATATCATGACAGGATGGCACCTGAAGTAGCAGCAGTTGAGA GAACAGGGGGATACGACCATCTGGTAGGTTTTCATTTAATACTTAAGCTT TTGAGGCCTTGATgagttcttaaccttttttaatttaaaagccttaaaat attctcaaaattgtttttcatttcagaCTCTTGAGAGTATTTTGGTGTGA GTTCCTAAGAAATCAAACGTTTTAGGGTCTTTGAAACCTTTGAAacaatt tcttcaaattttttgaagccctATTCTTCATATACTTTGGTCTTGTTAAT AATGTGAAGGGATCTAGATGCTCATTTCATGTTTTTGTTAGTCTTCTCAT AAAATGATGcttcttaaatattttttaactttCAAAGTGTGATGTATGGG CAGTGGGGATAACAGCAATAGAACTGGCAGAATGTCAACCACCACTATTT GAACTACATCCTATGCGGTATGTTTAAACAACAAAGCCAACCAAACCACC TGACTGAGAGGGGGTTACTTGGTTTGTGGGATGTCCGAGTcaaagttcaa attttcaaatattttcataaaatttttgaCCCTTAGAGTAAAGTGGTCGA AATATTAAGATATCTACCGATTGGCCTAAATGCAATTTTTGgcgggattt aatttggtgatagatcaatttcataaaacttggcggggatttaatttggc aaattggaaattttgaaacaaggaaacgggtgaaaattactcaaaaatat actaaaaagttatggtctttcacataattctctttttgttaaatttggtg gggatttaatttggcggggatttaatttggcgaattgccgaatttggaaa ttttggcgaggatttaatttcgtgaattttggcaaaataatAAAGTTACA TGAGAGCATGAGACTTTGCACAAAtgtagtttaggggtcaaaatttgatt taaatctcagacccaaaaaattggcaccactctgtttgtgtattttacag accagaacaggTTCCCAGgcttaaattaattttttttctccaaagtatgc cctgttacataccgttggaaagcatttttcaagctcatttataaaaacat tatatatgagaatgaagccaataaaagttattaaATTGCTTAGTAATTGC TGACTGACAAAAATTCGAGCACTCTCTTTcgacgagcacaaaaccgctat ctaattcgaattctatcaaaagtggctgttttttgtctccgctgaaaATT ATATTGAGGCAGActttataacaaaataaaggTTATGATTATAGCAGAta ttaaaacacttttttttgacacttttagGTAAAGAAACTAAGTAATTAAG AACATCGTGAGAACATGATAAGCCTGATATATtcagaaaattaagaacag cccagcctgagctgAAATTTACTGATTTTTATAAATGTATCTGGTTTGTT TCACTTTTATGTCATAATTGACTGGATGACCTATCTTATATCACTATTAT TTTAGTAAATTCTTGTTATAGTGCACTGTATTTGATCTCCAAGAAAAACT ATACACCACCCTCAGTAAAAGACAAAAGCAAATGGTAATATAATATTACT ATCATTAACATCATTGAGGTGTTTTCAAAGGACAGTTAATTTCTTTTACN TTAGTGCACTGTATTTGATATCCAAGAAAAACTATACACCACCCTCAGTA AAAGACAAAAGCAAATGGTAATATAATATTACTATCATTAACATCATTGA GGTGTTTTCAAAGGACAGTTAATTTCTTTTACATGATTTtaatctgaaag ttttttttcaggcCTAATATCCTATTTCCTAGTCCAGTTCCAAATTACTA AGTAGTGTTCCAGGATTCTATATCAAATTAACCTCTCTCTTGTCTTTGTA GGAGCTCTTCTATGAGAGAATTCATCAAACTTTCGTTAACAAAAAATCCA AAGAAAAGACCAAGCTGTGAGAAACTACTGCAGGTGGGGATTTTGATGTC TGCACAAACTTGTCTGACCTTGATAGAAATATTACCAGTCAAGCTACAAT TTCAATCTAGGTCcgaatagtgtttttttttaaagttacacATTTGCCAT CTGCACATGGAATTTTTCTAACTGGGATTTACATcctgttttttaagaaa aaaaagtcaACAATTATTCCAAAATTGGGTTGGAGCCCTTTGCCAAAGTT GGTTATAGCACTTTTAATCAAAGACCGCCAATAATCTGCAATAATATTTA AACTTCACTCGGTATAACAATCTGTGATCTTAAGAATCCTGTCTTTGTAT ACAGCATGCATACTGTCAATCACGTCAAGTCAGGCGGGTACTGACAGAAC TGCTTGACAAGTTTGATAAGTTGAAACAGCAGAAGAAATATCGCTACAAA GAAGCCAACACTGATGAAGatagtgaagaagaaaatgaaaagaatgagaa aaaagaaaataaccaaAACAACGAAAATAAGGTATAATTCACTGAGCTAA ATAAACCCTGGGGAAAGTTTCTTGTAATCCAAGctaggaaaatcttttaa tCGGGTTTTTGTAGTGTACGCTAATGGCACCAATAGTAACATTATTCAAA AGCAGTGTATTGCATCGAGAGATGCTAGATTTACTTTTCATTGAATACTT GTTTTTTTGCCttgccctaaaaataagaacagagtGTAACTGTAAGAACA TTTTGatgctcaaagtgccaaaaaataacaACAGCTGAGCCTGAACAAAA CTTTACTGGTTCTTAATGTCAATTccttttctattgttctttaccaaatt tcttaaaataaatACGAAAATTTCCCTGCAGGATAAAAGAACAGTCAAAC GGATCAAatctaaaaaagacaaaaacagaaaagataAAGTCAATTGTAag tattttgacaattttctgaACTGTTATGTTACTACGTTACGTAGGAAATT ATTATGTATCATTTGACATAACGACATTTGACAGAACATATACTCCACAG TATAGCTAACTCCTCATAGTTCCATTTGGGCTTGTAACGCCTCCTAAGTT CCCCATTTCTCTGTTAGACGTTGTTTAGGTTACACACtattatttattat tgtttATGCACTAAATGTCTCCCTAAAGTTGATGCGTCTTGGGATGTGGT AGGCTCTAACTATCTAGATTCTAGAAGatgttttttgaaatcttccAGAA GTAACTTGCCCTGACAGCCAAATTAAATTTActtgattttctgatttatt tAGTACCGGACAAGGACATGCAGCCGGTACAAAGAGAAACGGAACCCGAA CGGAAGGTACGATTTCCCTCGTTATTTCCCTCTGGTATAGAACTTTTATA CTGATGAGAAAAATTATATGCGTGTCTCTGCCCAAAACGTCTGAGATTTC TATTTCTATCATGTCTAGTAGACTGTAGTCGTTTATATAGTCCATGTAAA ATAATAATACGGGTGTTATAATGATAAGATGATAGTTGCTATGGGTTGAA TGAACTACAATTTGTTCCATCAatgattttttgcttattttctgTTATGT CTAATCACTAAAATTGGTTTTTAAACAATTAAACAGATTATTAACTAGCT GCCCGTGCTTCAACACCTCGAGCTGACTAATTACTTCCCTTCAGATCAAC GTAATTTCACTTGCAAAGTGTACTGTCACATGATCATTGAGCATTCCATT TTTCATATGAAGGTGGCGTTGACACCAACTACGTTTCTACTACAGTTTAT ATAGAGTAACTCCTAACttgattttatttgttttcaattttcaggcCACG ATAAAAGCCAAACCACCTCCACCTGTTCCAACACACaggttttttcttct tctttccatcataatttttttatatcgacaatatattgaaaaggtgtccg NTTTCTTTCcatcacaatttttttatattggAGAATTTcataagggctac atacactacacaatatattgtcaggcaatatattgatgatatattgctga atgtcgacaatatattgaaaaggtgtccgcaatatattgtcagctcgatt tgcaatattccaacaataaagggggattgtttacagaaagaaaattcctt tttataatagagtataccagttgtttacttcgtacattacggtccgcaaa ccatattgtcgaatattgttcgtcaatatattgtgtagtctaagtagccc tatAGGATAACGCAGACAGAACAATACAAATTTAATTGATTTGAGTTTTG GTCCTTATTTATTAGATCTATAATAGATTTAGATGACGATTGTAGAAATT GACTCTAAAACTTATACTAAAGAGCGTCTACCACAACAGAAAGTTTTCGT TTTGCATACAACTTAAttaattttgtttcaaatttctttttagcTCTGAA GGACCACCAACGTTGACCGAAGCACCAAAAAGAAACCTTCCACCACCACC TCCTTCACCTAAACAACGATCAAGCTCGGTAAACTACTACTGAATCAATG ATCTTAGCTCTCGATCTGGCCACTTTGCTACAGTCGACGCTTTTTTTTAt ccgataatattgaaagtcaccatcaagaaaaaaactcataaacgacgcca attttccttgaaaactaGACCAGAAAGCGTCAACTTTAATTGAATGCTAA CTCGGcactgagctttatataaacCTTGCAGGAAGTTTCTTAATTTCGGC CAACCAAAATCTCGATCTAAGTTTTTCGAAAGTGGTACTAGCGTTGTATA TGCATCGAGAGTGCTAGTCTACTTTTCCTTGAACACTTTTAATGATGTGG CGCCGTTAGACGTTGAATCTTTTATACTGccatggcttctttgcgggtat cATACGATTAAGATGATAACGTGCCTTCGTATGCCTCTAAGCTCTTATTT AGACAACAGAGTTTTGTATGAGCTCCTTTAATGtaagagaaaaaatgaag agATTGAGCACTCCCTTTGTTTTTCAAGTTTAATGAGAACAgaactgttt ggaaaatgtaaaacctttttttgtCTGTAAGAAGTTTAGGCAGAGATGAA ACCGCATTTAAaagtaatgaaaaataaatcagcCAATAAAAAACTCATTC AAACTTGAAATAAACCACAGCAGTTTAttaaatcttttggtttttaagaa gggtgtttattcgagggggttTTTAAAAGAAGGTGGGTTTTTCGAAGTAA TTTGGTATGAGGACAGTTATATAAACTCTGAACTcatcaatttcaaattc aaatttttttatagaatGGTGCTGCTGCTCGATCTTCTCCCAGTCCACCG CCTCCCCTCCCACCACGCCCACCAGCAAATTCAACGCCATCAGATGACAT GCCCACCATCAAAGCGCCCTCACAAGGAAAAGGAGCCGCCCCACCACCAC CTTTACCGCCAAGAGTTCCTACCGTGCACAAGAGGGAAAGGGTAAGATTT GTTATAGTTTTTTTAGTATGCACACTTTTCGTAGAAATTTTGTGGCttat attgggctcttccagaaaaaaatccgtCATGGGGGAGGGGTGGATGATGA ATGGTCCCAAAAAAAGTCCTAAAATTTGCATTGTCAAGGGTGTAAATCTG AGATGTCCGGGGGTAAACTTTGGTGTCCTTAAATTGATGATTGCCGATTG GTATAACCCATGTTCATGGGGTGAAAAATGGAAATGTTCAGGGCTAAAGC ATTGAAAAATAATACAtccattttttttgcaaagattGACGAAACTGAAG TTTTCTTCGCCATCAATATCATACCAAATTCAAATTcgtctatttttcat ttttcttagcCTCCATCACAGCTATTCACACAAAGGGCTACGGTATGTTA TATCTAGATGATTGTTTTAGTTTCTTAATTTCTTTGATCAATACAAGAAA AAAATAGACAATCGCTATCAAAAAAATGAATAGCCATAAGAATTTGAATC AAATTACAATATTCATTCTCATTTTTCTATCATAAGTAGAAAAATCGCTA ATAACGATATCCTAACTAACGACTCCTACCATTTCCTATCAGTGTTTGTA ACTTCGTGATTTCATGTTTTCATATTTCAGGCGAATtgcttttcaaagat tttcaacgAATGTCCATTAAATATCTCTGCCGCTACCAGTTGGACGCATC CAGAAACTAAAAGTAAGCTTGTCAATCGTCTAAAAAGTCACTAGATCTTT AGGAAACTGTTTAATGAAGACTTCACTCTATTTGATTTACTTGATTGGGC ATCCTCTCTGAAGCGTGTCTCGTGAGCAAGAAATCGGCCTGTTGTTCCCA TTATAAAAGTGTCGGCATTCAGGGATTGAAAGCTGACGTTCGAAAATCAA ATGTAACTAATTCTACAAGCAATCTGGANTGGCttatattgggctcttcc agaaaaaaatccgtCATGGGGGAGGGGTGGATGATGAATGGTCCCAAAAA AAGTCCTAAAATTTGCATTGTCAAGGGTGTAAATCTGAGATGTCCGGGGG TAAACTTTGGTGTCCTTAAATTGATGATTGCCGATTGGTATAACCCATGT TCATGGGGTGAAAAATGGAAATGTTCAGGGGTAAAGCATTGAAAAATAAT ACAtccattttttttgcaaagattGACGAAACTGAAGTTTTCTTCGCCAT CAATATCATACCAAATTCAAATTcgtctatttttcatttttcttagcCTC CATCACAGCTATTCACACAAAGGGCTACGGTATGTTATATCTAGATGATT GTTTTAGTTTCTTAATTTCTTTGATCAATACAAGAAAAAAATAGACAATC GCTATCAAAAAAATGAATAGCCATAAGAATTTGAATCAAATTACAATATT CATTCTCATTTTTCTATCATAAGTAGAAAAATCGCTAATAACGATATCCT AACTAACGACTCCTACCATTTCCTATCAGTGTTTGTAACTTCGTGATTTC ATGTTTTCATATTTCAGGCGAATtgcttttcaaagattttcaacgAATGT CCATTAAATATCTCTGCCGCTACCAGTTGGACGCATCCAGAAACTAAAAG TAAGCTTGTCAATCGTCTAAAAAGTCACTAGATCTTTAGGAAACTGTTTA ATGAAGACTTCACTCTATTTGATTTACTTGATTGGGCATCCTCTCTGAAG CGTGTCTCGTGAGCAAGAAATCGGCCTGTTGTTCCCATTATAAAAGTGTC GGCATTCAGGGATTGAAAGCTGACGTTCGAAAATCAAATGTAACTAATTC TACAAGCAATCTGGAGAAACACTCAGAAGAAAGATTATCATTGCGTTTAA GTCTAAGGAGTTAGCGTTGTGGAGCAATCCAAGGATAAAGCTACAAAGCT TTCGAAAGATGAGCCTTGGGGTCGCCTCCGAAGACTTATTGCAGACTTCT ACAAGCCTATAGGTTACCTACTTCGTGTGTAGATTAGTTGGATGGATTAt tgttgttaatttttttagcTCTACGCCTCTCTCTTTTCAGATCATCATTT ATTGTTTGCATCAAACGAAGGGATTTACAGCCTCAATTTGGATGATCTGC AAAATATAGAAATGTTTCAGGTGTGTTTTTCTTCTGTTTGCAGTCTGTAG TAGATAGCCATCTTCAaatatgattttaaaattttatgtacGACCCAAGA CCTTGGGCACCGTTTTACGGTTtttaatttcatgttttatcTTTACCGTA GATTTTTTCACGGCCATGCAGTTGGGTGTACGTCATCAAGAATATATTGG TATCCATCTGTGGCTCTCCTGCACACGTCTACATGCACAATTTGTTGTCG CTTCATGGTCAGCAAAACATTGAACAGTTTTTACCAGTACCAAAGTAAGT TTAATAGTTGGTTCAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044513XLOC_044513Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071636-exon-scaffold_63-1491911889:184492..184613TCONS_00071636-exon-scaffold_63-1491911889:184492..184613Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1510915933:184492..184613TCONS_00071636-exon-scaffold_63-1510915933:184492..184613Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1575043694:184492..184613TCONS_00071636-exon-scaffold_63-1575043694:184492..184613Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1491911889:184791..184848TCONS_00071636-exon-scaffold_63-1491911889:184791..184848Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1510915933:184791..184848TCONS_00071636-exon-scaffold_63-1510915933:184791..184848Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1575043694:184791..184848TCONS_00071636-exon-scaffold_63-1575043694:184791..184848Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1491911889:185022..185112TCONS_00071636-exon-scaffold_63-1491911889:185022..185112Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1510915933:185022..185112TCONS_00071636-exon-scaffold_63-1510915933:185022..185112Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1575043694:185022..185112TCONS_00071636-exon-scaffold_63-1575043694:185022..185112Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1491911889:186349..186413TCONS_00071636-exon-scaffold_63-1491911889:186349..186413Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1510915933:186349..186413TCONS_00071636-exon-scaffold_63-1510915933:186349..186413Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1575043694:186349..186413TCONS_00071636-exon-scaffold_63-1575043694:186349..186413Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1491911889:187005..187060TCONS_00071636-exon-scaffold_63-1491911889:187005..187060Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1510915933:187005..187060TCONS_00071636-exon-scaffold_63-1510915933:187005..187060Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1575043694:187005..187060TCONS_00071636-exon-scaffold_63-1575043694:187005..187060Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1491911889:188719..188809TCONS_00071636-exon-scaffold_63-1491911889:188719..188809Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1510915933:188719..188809TCONS_00071636-exon-scaffold_63-1510915933:188719..188809Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1575043694:188719..188809TCONS_00071636-exon-scaffold_63-1575043694:188719..188809Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1491911889:188970..189042TCONS_00071636-exon-scaffold_63-1491911889:188970..189042Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1510915933:188970..189042TCONS_00071636-exon-scaffold_63-1510915933:188970..189042Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1575043694:188970..189042TCONS_00071636-exon-scaffold_63-1575043694:188970..189042Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1491911889:189413..189464TCONS_00071636-exon-scaffold_63-1491911889:189413..189464Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1510915933:189413..189464TCONS_00071636-exon-scaffold_63-1510915933:189413..189464Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1575043694:189413..189464TCONS_00071636-exon-scaffold_63-1575043694:189413..189464Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1491911889:189779..189858TCONS_00071636-exon-scaffold_63-1491911889:189779..189858Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1510915933:189779..189858TCONS_00071636-exon-scaffold_63-1510915933:189779..189858Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1575043694:189779..189858TCONS_00071636-exon-scaffold_63-1575043694:189779..189858Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1491911889:191046..191108TCONS_00071636-exon-scaffold_63-1491911889:191046..191108Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1510915933:191046..191108TCONS_00071636-exon-scaffold_63-1510915933:191046..191108Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1575043694:191046..191108TCONS_00071636-exon-scaffold_63-1575043694:191046..191108Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1491911889:191293..191374TCONS_00071636-exon-scaffold_63-1491911889:191293..191374Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1510915933:191293..191374TCONS_00071636-exon-scaffold_63-1510915933:191293..191374Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1575043694:191293..191374TCONS_00071636-exon-scaffold_63-1575043694:191293..191374Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1491911889:191696..191872TCONS_00071636-exon-scaffold_63-1491911889:191696..191872Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1510915933:191696..191872TCONS_00071636-exon-scaffold_63-1510915933:191696..191872Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1575043694:191696..191872TCONS_00071636-exon-scaffold_63-1575043694:191696..191872Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1491911889:192223..192286TCONS_00071636-exon-scaffold_63-1491911889:192223..192286Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1510915933:192223..192286TCONS_00071636-exon-scaffold_63-1510915933:192223..192286Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1575043694:192223..192286TCONS_00071636-exon-scaffold_63-1575043694:192223..192286Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1491911889:192645..192697TCONS_00071636-exon-scaffold_63-1491911889:192645..192697Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1510915933:192645..192697TCONS_00071636-exon-scaffold_63-1510915933:192645..192697Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1575043694:192645..192697TCONS_00071636-exon-scaffold_63-1575043694:192645..192697Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1491911889:193186..193229TCONS_00071636-exon-scaffold_63-1491911889:193186..193229Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1510915933:193186..193229TCONS_00071636-exon-scaffold_63-1510915933:193186..193229Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1575043694:193186..193229TCONS_00071636-exon-scaffold_63-1575043694:193186..193229Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1491911889:193785..193869TCONS_00071636-exon-scaffold_63-1491911889:193785..193869Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1510915933:193785..193869TCONS_00071636-exon-scaffold_63-1510915933:193785..193869Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1575043694:193785..193869TCONS_00071636-exon-scaffold_63-1575043694:193785..193869Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1491911889:194656..194832TCONS_00071636-exon-scaffold_63-1491911889:194656..194832Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1510915933:194656..194832TCONS_00071636-exon-scaffold_63-1510915933:194656..194832Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1575043694:194656..194832TCONS_00071636-exon-scaffold_63-1575043694:194656..194832Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1491911889:196088..196120TCONS_00071636-exon-scaffold_63-1491911889:196088..196120Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1510915933:196088..196120TCONS_00071636-exon-scaffold_63-1510915933:196088..196120Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1575043694:196088..196120TCONS_00071636-exon-scaffold_63-1575043694:196088..196120Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1491911889:196359..196440TCONS_00071636-exon-scaffold_63-1491911889:196359..196440Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1510915933:196359..196440TCONS_00071636-exon-scaffold_63-1510915933:196359..196440Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1575043694:196359..196440TCONS_00071636-exon-scaffold_63-1575043694:196359..196440Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1491911889:196882..196961TCONS_00071636-exon-scaffold_63-1491911889:196882..196961Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1510915933:196882..196961TCONS_00071636-exon-scaffold_63-1510915933:196882..196961Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1575043694:196882..196961TCONS_00071636-exon-scaffold_63-1575043694:196882..196961Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1491911889:197093..197258TCONS_00071636-exon-scaffold_63-1491911889:197093..197258Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1510915933:197093..197258TCONS_00071636-exon-scaffold_63-1510915933:197093..197258Clytia hemisphaericaexon
TCONS_00071636-exon-scaffold_63-1575043694:197093..197258TCONS_00071636-exon-scaffold_63-1575043694:197093..197258Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_63supercontigscaffold_63:184492..197258 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0 0 0 0 0 0.246261 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Blast
BLAST of TCONS_00071636 vs. Swiss-Prot (Human)
Match: M4K5 (Mitogen-activated protein kinase kinase kinase kinase 5 OS=Homo sapiens GN=MAP4K5 PE=1 SV=1)

HSP 1 Score: 422.935 bits (1086), Expect = 1.076e-136
Identity = 191/278 (68.71%), Postives = 231/278 (83.09%), Query Frame = 3
Query:   39 ADIKKTKPEKDIELIQRIGSGTYGEVYKARWKATGEMAAVKIINIEPGDDFDIIQQEIKIMEECKHFNIVQYFGSYLRRDKLWIAMEFCGGGSLQDIYHVTGPLNEPQIGAVCTEMLKGLDYMHKQHKLHRDIKGANILLTSEGDVKLADFGVGAQITSTMGKRNSFIGTPYWMAPEVAAVERTGGYDHLCDVWAVGITAIELAECQPPLFELHPMRALYLISKKNYTPPSVKDKSKWSSSMREFIKLSLTKNPKKRPSCEKLLQHAYCQSRQVRRVL 872
            ADI +  P++D EL+QR+GSGTYG+VYKAR   TGE+AAVKII +EPGDDF +IQQEI +++ECKH NIV YFGSYL R+KLWI ME+CGGGSLQDIYHVTGPL+E QI  VC E L+GL Y+H + K+HRDIKGANILLT  GDVKLADFGV A+IT+T+ KR SFIGTPYWMAPEVAAVE+ GGY+ LCD+WAVGITAIEL E QPP+F+LHPMRAL+L+SK N+ PP +KDK+KWSS+   F+K++LTKNPKKRP+ E+LL H +     + R L
Sbjct:    9 ADILRRNPQQDYELVQRVGSGTYGDVYKARNVHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHTKGKMHRDIKGANILLTDHGDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELGELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKIALTKNPKKRPTAERLLTHTFVAQPGLSRAL 286          

HSP 2 Score: 104.375 bits (259), Expect = 4.121e-23
Identity = 43/87 (49.43%), Postives = 64/87 (73.56%), Query Frame = 3
Query: 1473 CFSKIFNECPLNISAATSWTHPETKNHHLLFASNEGIYSLNLDDLQNIEMFQIFSRPCSWVYVIKNILVSIC-GSPAHVYMHNLLSL 1730
            CFSK+F+ CPL I+ ATSW HP+TK+ +++F + +GIY+LNL++L    M Q+F R C+W+YVI N L+S+  G    +Y HNL++L
Sbjct:  497 CFSKVFDGCPLKINCATSWIHPDTKDQYIIFGTEDGIYTLNLNELHEATMEQLFPRKCTWLYVINNTLMSLSEGKTFQLYSHNLIAL 583          
The following BLAST results are available for this feature:
BLAST of TCONS_00071636 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
M4K51.076e-13668.71Mitogen-activated protein kinase kinase kinase kin... [more]
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