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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071624 ID=TCONS_00071624|Name=TCONS_00071624|organism=Clytia hemisphaerica|type=transcript|length=1115bp
catttaatttccaaattcgttCATCTGTTTGGAGGGGAGTAGAATAGATT
GAGACATTTTTCAATTAAGTTTGGCGTTCACATAATTGGCTAACCCATAA
acagttttggggaaaatttagtcCCAACCGAAGGTATCCCCAAAACAAGA
CAATGGTTGCAGACTGACCGGACAACATAACAATAAAAGAGAAGAAAtaa
ccaataaaaaataaacagttAAATATGACAAATCCTAAATATGATGAAAT
CTAAATTAATTAAACGACTATATACAACTAGATCTAGCCACTGGTAGTTC
TATTGATATTCTTACTTGCCAATAACCTAGTACCATTAAAAATGAAGCAG
ATACAGAAAAAGAATaacacacaaaaaaataaataaattgtctCTGCATC
ACGCGACCAAAGCACGGGGCGTTGTGAGAGGTAGTGATGAAAAACTTGCC
CTGTACCACGTGAGCCAAGCAACTACCTGTCATGGTCTATTATAAAAATA
ACTCAGCCTGCGATAAAATACAAACTATGATGATCTTGCCAGCTTTCCAG
CCCACCATATTGAGGACTGAAACCCAACTACCACCTAGCTATCTGGGAAC
CAGGTACCCCTAAATTCCCTTAAAATTTCAATTAGATAATCCTAGTCTAA
AGTAATACAATGAATGTAACTTAACTATAAAGCTTAGNCCAAGCCGCCGT
CGAGGTAACCAGACCACCGTCGAGGTTACCAGACGGCCGTCGAAGTTTCT
GAGAGAACCGAACCGCCGTTCGAAATTCCCCCAAAGAAGTGACTCCCCTT
AATTAGGGCCCGACCTGGGACATAAACACACATAACACACTCACAAAGCT
CTCGTATTTATTGTAACATCTGGAGTGCCACTGGCCTAGCCTTTGAATTA
ACCAAGAACTAATTTCATGATTTTCCAAGATTCAATTTTACTGCAAAAAC
AAGACTGATTTTGCAGGATGCGTAAATAAACGCAACTTTCCCTTAAACTT
TCATTTTATGCCTGttaatgaggcccccccagtcgaccctcaattcacgt
attcacgcaaaattttttgccaattcacgtattcacgcgcgaaaaaaacc
attttcacgttcacg Run BLAST on NCBI transcript from alignment at scaffold_62:286078..287192 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071624 ID=TCONS_00071624|Name=TCONS_00071624|organism=Clytia hemisphaerica|type=transcript|length=1115bp|location=Sequence derived from alignment at scaffold_62:286078..287192 (Clytia hemisphaerica)
cgtgaacgtgaaaatggtttttttcgcgcgtgaatacgtgaattggcaaa
aaattttgcgtgaatacgtgaattgagggtcgactgggggggcctcatta
aCAGGCATAAAATGAAAGTTTAAGGGAAAGTTGCGTTTATTTACGCATCC
TGCAAAATCAGTCTTGTTTTTGCAGTAAAATTGAATCTTGGAAAATCATG
AAATTAGTTCTTGGTTAATTCAAAGGCTAGGCCAGTGGCACTCCAGATGT
TACAATAAATACGAGAGCTTTGTGAGTGTGTTATGTGTGTTTATGTCCCA
GGTCGGGCCCTAATTAAGGGGAGTCACTTCTTTGGGGGAATTTCGAACGG
CGGTTCGGTTCTCTCAGAAACTTCGACGGCCGTCTGGTAACCTCGACGGT
GGTCTGGTTACCTCGACGGCGGCTTGGNCTAAGCTTTATAGTTAAGTTAC
ATTCATTGTATTACTTTAGACTAGGATTATCTAATTGAAATTTTAAGGGA
ATTTAGGGGTACCTGGTTCCCAGATAGCTAGGTGGTAGTTGGGTTTCAGT
CCTCAATATGGTGGGCTGGAAAGCTGGCAAGATCATCATAGTTTGTATTT
TATCGCAGGCTGAGTTATTTTTATAATAGACCATGACAGGTAGTTGCTTG
GCTCACGTGGTACAGGGCAAGTTTTTCATCACTACCTCTCACAACGCCCC
GTGCTTTGGTCGCGTGATGCAGagacaatttatttatttttttgtgtgtt
ATTCTTTTTCTGTATCTGCTTCATTTTTAATGGTACTAGGTTATTGGCAA
GTAAGAATATCAATAGAACTACCAGTGGCTAGATCTAGTTGTATATAGTC
GTTTAATTAATTTAGATTTCATCATATTTAGGATTTGTCATATTTaactg
tttattttttattggttaTTTCTTCTCTTTTATTGTTATGTTGTCCGGTC
AGTCTGCAACCATTGTCTTGTTTTGGGGATACCTTCGGTTGGgactaaat
tttccccaaaactgtTTATGGGTTAGCCAATTATGTGAACGCCAAACTTA
ATTGAAAAATGTCTCAATCTATTCTACTCCCCTCCAAACAGATGaacgaa
tttggaaattaaatg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00071624-exon-scaffold_62-1491911889:286078..287192 | TCONS_00071624-exon-scaffold_62-1491911889:286078..287192 | Clytia hemisphaerica | exon |
| TCONS_00071624-exon-scaffold_62-1510915933:286078..287192 | TCONS_00071624-exon-scaffold_62-1510915933:286078..287192 | Clytia hemisphaerica | exon |
| TCONS_00071624-exon-scaffold_62-1575043694:286078..287192 | TCONS_00071624-exon-scaffold_62-1575043694:286078..287192 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_62 | supercontig | scaffold_62:286078..287192 . |
Blast
The following BLAST results are available for this feature:
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