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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071600 ID=TCONS_00071600|Name=TCONS_00071600|organism=Clytia hemisphaerica|type=transcript|length=404bp
agaaaatcaaacaaaaatattatataaaatcAAACAGACAACTGGCTTTG
CAATAATCATCTCCTCTAAATTCATGATTAAATTTTAAACATAAAATGTG
CAAGATGATTTGCAGCGCAACCCATATCAATCCATCAACCTGCGTCAACT
ATCCCACCGTCATATTGGTGTATCATCCGTCGAACGATCATTGCCAAGAA
AAGTCGTGAGAAGCACAGTCACTCGCAACTGcacacttttcttttttagt
attttacgTTACTGTTGTATATTTTGTAAAGTAGGACCTATCAAGAAATA
AAGTAAAACATCTTTCAGGATGCACAGTTGACCTAAATAGTCTTAAGTTG
ATCATAAAGATATGAGTTGATTTGCCTTCATATAAGACCCGTATACCCAT
GCAC Run BLAST on NCBI transcript from alignment at scaffold_62:61211..62169- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071600 ID=TCONS_00071600|Name=TCONS_00071600|organism=Clytia hemisphaerica|type=transcript|length=959bp|location=Sequence derived from alignment at scaffold_62:61211..62169- (Clytia hemisphaerica)
AGAAAATCAAACAAAAATATTATATAAAATCAAACAGACAACTGGCTTTG
CAATAATCATCTCCTCTAAATTCATGATTAAATTTTAAACGTAAGTGAAA
CTTGATTTATACACTCTGTTAAATTTGTTAATATTATTTCTTATGTTTGA
ACATGCTGGCATTTAGATTGCCTCGTCAATAATGATTGCTCTTTTCACAT
ATAGATAAAATGTGCAAGATGATTTGCAGCGCAACCCATATCAATCCATC
AACCTGCGTCAACTATCCCACCGTAAGTTCTCCAACTTCGTATCAGAGTT
CTTTCAATGTTTATGTCCTTCCGTACTGTATCATGCTTTGTTCTTTTTAT
TAGAATGAAAATCGCTTAAAGGTATTTTTTTTAGAAGATAAACAAAGCTA
TCACAACAAAAATTTATTTTCATTAGATATTTGTCGAATTTCCTGATACT
TCCATGTGTAAATAAATCGACTGGAAAGTGTTCATGTTTACAAGCAAACT
TCATGGTGAACCCTTGGTAATCAGTTGGCAAATCAACGTAAGTGTTACGC
TAGTTGTATTTAATTGTTCATTTACTAAAGTAATTATAAGTAACTGCTAT
ATTTACTTTATTTTCTAAACTCTCTTCTCGTTCGTTGTGCGTGATAAGCG
ACCGGTGATATGATAACACTAAATGTTAACAGAAAAATATCAATAAAATC
AATCTTCTTTCAGGTCATATTGGTGTATCATCCGTCGAACGATCATTGCC
AAGAAAAGTCGTGAGAAGCACAGTCACTCGCAACTGCACACTTTTCTTTT
TTAGTATTTTACGTTACTGTTGTATATTTTGTAAAGTAGGACCTATCAAG
AAATAAAGTAAAACATCTTTCAGGATGCACAGTTGACCTAAATAGTCTTA
AGTTGATCATAAAGATATGAGTTGATTTGCCTTCATATAAGACCCGTATA
CCCATGCAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00071600-exon-scaffold_62-1575043694:62080..62169 | TCONS_00071600-exon-scaffold_62-1575043694:62080..62169 | Clytia hemisphaerica | exon |
| TCONS_00071600-exon-scaffold_62-1575043694:61898..61965 | TCONS_00071600-exon-scaffold_62-1575043694:61898..61965 | Clytia hemisphaerica | exon |
| TCONS_00071600-exon-scaffold_62-1575043694:61211..61456 | TCONS_00071600-exon-scaffold_62-1575043694:61211..61456 | Clytia hemisphaerica | exon |
| TCONS_00071600-exon-scaffold_62-1510915933:62080..62169 | TCONS_00071600-exon-scaffold_62-1510915933:62080..62169 | Clytia hemisphaerica | exon |
| TCONS_00071600-exon-scaffold_62-1510915933:61898..61965 | TCONS_00071600-exon-scaffold_62-1510915933:61898..61965 | Clytia hemisphaerica | exon |
| TCONS_00071600-exon-scaffold_62-1510915933:61211..61456 | TCONS_00071600-exon-scaffold_62-1510915933:61211..61456 | Clytia hemisphaerica | exon |
| TCONS_00071600-exon-scaffold_62-1491911889:62080..62169 | TCONS_00071600-exon-scaffold_62-1491911889:62080..62169 | Clytia hemisphaerica | exon |
| TCONS_00071600-exon-scaffold_62-1491911889:61898..61965 | TCONS_00071600-exon-scaffold_62-1491911889:61898..61965 | Clytia hemisphaerica | exon |
| TCONS_00071600-exon-scaffold_62-1491911889:61211..61456 | TCONS_00071600-exon-scaffold_62-1491911889:61211..61456 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_62 | supercontig | scaffold_62:61211..62169 - |
Blast
The following BLAST results are available for this feature:
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