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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071598 ID=TCONS_00071598|Name=TCONS_00071598|organism=Clytia hemisphaerica|type=transcript|length=303bp
CTCGTAGCTATATCTTTTCTCCTTCAAAAGAATGTATGAAtgtgtttttg
atgtttttgttgcTTGTTTAAAGCTTAGTACagGTAACTCTCTTGCAGGG
AAATTATGTGAGTCTGCCTGGGTTTTCAAAGTTcataaagtctgtcaaca
agggttcacaaaCAGATTGTTTcaaacattctgtgtcagactaatctacc
tgcaccaaacTCAGAAATTTTAGAACTTAGTTATCTGaggcaattttatt
ttttctaaatttttgaactTAGATTCCCAGGCTACCATTAACGTATCTTG
TTG Run BLAST on NCBI transcript from alignment at scaffold_62:442957..444051+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071598 ID=TCONS_00071598|Name=TCONS_00071598|organism=Clytia hemisphaerica|type=transcript|length=1095bp|location=Sequence derived from alignment at scaffold_62:442957..444051+ (Clytia hemisphaerica)
CTCGTAGCTATATCTTTTCTCCTTCAAAAGAATGTATGAAtgtgtttttg
atgtttttgttgcTTGTTTAAAGCTTAGTACaggcaacgatgtaaaaata
atagataaccaacttgccttgattctcaaaaaacatccgtgttatggttg
tgaaaatattaatgacattttgcatcgtaaaaattgcaattaaataaaaa
cttgcttcatttgcaaccttctattggacataatcgatcacgtgatgtat
atttttccaaaatttgggttcgaaaaagtgtattttcctataggcagcct
cacagaaggaattttttaattagatataattgttctataaacattcattt
gtttattttgtatcaggcaaccttcatgcacttttcattcgtgagatatc
gcacttcaaatcacacatatatttttcagataacagcattttatgagcgt
ttatttatccagatgaagattaagtggtattaggcagatccgtagtcaat
ttgtctaaagattggtacctttatcttttgaaaaaaattccaaaatttgc
agtaaataacaattNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNTTTaatagagtgctcatttcaataggaaa
acaatggttgttctcttgggagaagtgccttctagaggtagttggttatc
tattatttttacatcgttggtacAGGTAACTCTCTTGCAGGGAAATTATG
TGAGTCTGCCTGGGTTTTCAAAGTTcataaagtctgtcaacaagggttca
caaaCAGATTGTTTcaaacattctgtgtcagactaatctacctgcaccaa
acTCAGAAATTTTAGAACTTAGTTATCTGaggcaattttattttttctaa
atttttgaactTAGATTCCCAGGCTACCATTAACGTATCTTGTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00071598-exon-scaffold_62-1491911889:442957..443039 | TCONS_00071598-exon-scaffold_62-1491911889:442957..443039 | Clytia hemisphaerica | exon |
| TCONS_00071598-exon-scaffold_62-1510915933:442957..443039 | TCONS_00071598-exon-scaffold_62-1510915933:442957..443039 | Clytia hemisphaerica | exon |
| TCONS_00071598-exon-scaffold_62-1575043694:442957..443039 | TCONS_00071598-exon-scaffold_62-1575043694:442957..443039 | Clytia hemisphaerica | exon |
| TCONS_00071598-exon-scaffold_62-1491911889:443832..444051 | TCONS_00071598-exon-scaffold_62-1491911889:443832..444051 | Clytia hemisphaerica | exon |
| TCONS_00071598-exon-scaffold_62-1510915933:443832..444051 | TCONS_00071598-exon-scaffold_62-1510915933:443832..444051 | Clytia hemisphaerica | exon |
| TCONS_00071598-exon-scaffold_62-1575043694:443832..444051 | TCONS_00071598-exon-scaffold_62-1575043694:443832..444051 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_62 | supercontig | scaffold_62:442957..444051 + |
Blast
The following BLAST results are available for this feature:
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