TCONS_00071594 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071594
Unique NameTCONS_00071594
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2579

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071594 ID=TCONS_00071594|Name=TCONS_00071594|organism=Clytia hemisphaerica|type=transcript|length=2579bp
TCATTCATTGGTTGAAGTCCagGTTGATGGATGCAATGTCAAACCATTCA
AAGTAAAATCTGTTCTGCAAACTGATCATGTAAAAGCATGTACTTCTTCT
TATTCAAGAACATTGACTGTGATTTCAGAAACAGGATCAACTCATCaatg
tcaaatttatttttgtaaatgcacAGAAGAGTTCAATACTTTGGTACATC
TGGATCTATGGGCAGTAACACCGATAAAGCCAAATACAgttatttcaatg
aatttgttACACCTTTTTGTTGCATTACAGTTGGAAGGGAAAATATCTTT
TTCGTCTTTTTGTGATGGTTTCTCTTGGAAAAGCGGAGTGGTTGATCATG
ACCTGAAGAGATACCTGAACCGCATGACCCAAACGGATTCATTAGATCAA
TTCAGACATTTCCGTCGACAATTAACAAGTCTGAAGACAATATGCCCGAA
CTATGATGGTTTGGAAAAGTGTGCATCTTGCCCCAAGGAGAATGGAAGTA
TTTTCTACTGCTTTGACGCCAACTTTGGACTTGTGTTAAAAAGCTCTGCT
TCTAAATCAAAGAGACTCGCTATGCGGTCGGAAAATCTATTTATCCTTGA
TGAGGAAGTAAAAACCTTTATGGAAAGCTACGATGATACTTTGAAGACAA
AGGATTGCAGCAATTTCCAAGCTGGCAACAATTTACGGTCAAAACGAAAA
ACGAAGAAACTCAGTGTAACTGGAGTATTTGgtatgtcTTGTCGTCATGA
GTTCCCGAAGCTTTTCTTGAATATGCAACACGGTGAAAGATTGGGCTACG
CCGTTCTTCTCCTTGATCAGATACTGAACGATACAGAAAAAAAGAGGTTG
GATGTGCACATCATATATGATATTGCATGCGTTTTGAAGTCACATTTGCA
GAAAAAGAATACTTTTACCAAGTAtcaagatttcaaatttggcatcCCTG
TTTTTCATTCGTATGGTCACAGAGGAGACTGTCAGgTGAAAAATTCAATC
AGAAGATTAGATTCTTTTGGCCTTATGGATGGTGAATTGATGGAACGCCT
CTGGTCATATCTTCGATCATTCTCAAAGATTACCAAGGAGATGACTCCAG
CTCACCGCACGGATTTACTTAGTGATGCTCTGCTGCATTTTGGCTCAAAG
AAAATGGGAAATATCGgaAAATATCTCGTGTTTCTATTTCAAAAAGCAAC
AAGAACTTTGAATTCTTGCGATTCAGAAATTAAAACGATTTGCTCTAAAC
TGCCTGCTCATGTGGATGAAGAAATTATCAAATCATGGAAAAAAGAGGAG
GATAACGCCGTAAGCCAAAATGGAAAACTTATACAGAAAACTCCTTCTGA
TTGGAAGCAAGTCTACTACCTTAAACTGAAAGACTTTTACAAAGAATCTG
CACTGGTTTTAATGAGCGAAAAAGTATGCGATGCTGCATCGCATCAACGA
AAGGCAAACAGACTGAAACGAAACTTGACATCGTTTGAAAAGCTTCATAA
AGTGAATACGAGATGGAAAACAACAGATCGCGACTTTCGAAGTCAACATA
TGACATTTTTGCGTGTGAAGTCAAACGAAACAGCATCCACACTATATAGC
AGATGTTCTGAAAGAATGATGCTCTTAACATTAAAGAAGCGATATGCAGA
TGGTTCGGCGATCGCGACGAGATTGAGCAAACAGATAAATAAAGTATGTA
AAGAAATCAAGAACCTGCTTGCCTCATACAATTCAATGAGATTGGAAATG
TCACCAAATTTCAAAACTATAGATTACAAAGATGCCCTCAACACAGAGGC
TCCAATATATAATGAAGTGAACTTTGTATCCAACGTCAATGAGGTAAGAA
GCTCGTCAATCCCTACGAATGTTGTGAAAACATTGGTTCAATTCTATTTG
AGAAAACAAAGAGCACAGGAGGAGATCGTTATAGTTCAAGAAGAAATGAA
AGCAACGTTGTCCTATTGGAGAGACCAGTTAAATTTTCTTGTTGAATGTG
CTTCGCAGCAAACGTCCTTTGGGTTGAAATATTTACTTCAAGAAAGAATA
TTCATTGTTAACAGCTTGACAAAGGAATTAGAACAATTATTTAATTCTGT
TACGAACATTGAGCTTCAGACAGAATATGTTAATCGTAACTTGGATGTTT
GTATCGATGAAATGGACGGTATTTACAGTGACAGTGATTGTTCAAGTGAG
GACGAAGAAGATTTATGTTCGAGTGGGAGCGACATTGAGGATTCAGATTT
TAATGGTTTATACATTTAGGCTTGATATTGCAACTTATGTNGGACGAAGA
AGATTTATGTTCGAGTGGGAGCGACATTGAGGATTCAGATTTTAATGGTT
TATACATTTAGGCTTGATATTGCAACTTATGTCCAtgtaaaaagttgttt
ttaatcCTTAACATTTTTATAGATTCATTAACCAAGGGTATCATCTAGAA
TTAGTCCGTtagattttaaagttttagcctcctaattgacaaaaaaatta
ggttttcttTCAAGCTTAGCTTGTAATGTCGGAACTCTGGAACTTAATAC
TTTTTATTTCCTTTCGAATAAAAGCCCGC
Run BLAST on NCBI

transcript from alignment at scaffold_62:390521..402149+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071594 ID=TCONS_00071594|Name=TCONS_00071594|organism=Clytia hemisphaerica|type=transcript|length=11629bp|location=Sequence derived from alignment at scaffold_62:390521..402149+ (Clytia hemisphaerica)
TCATTCATTGGTTGAAGTCCaggtttgtttgttttcttcTGGTCTGTCTA
TAATAGGCACCCTATTGGAATTTCATTGtggttgatatttttcaaattcg
aaaGTGGGGGCTGGGTTGATGACAAGTTTCATATAGAGGTTTCCCTATGT
GAGTGGGATGCCTTTGNGGGCTGGGTTGATGACAAGTTTCATATAGAGGT
TTCCCTATGTGAGTGAGATGACTTTTTCCAGATGGAGGTCAGAGAGTTTA
TTGTTGATTTCAAAGTTGAGGGAGTTAAGGTTGAGGAATATTCTCgaata
tttattaaaaagaacaaaaggTCTGCTCATACTTCTGAAGAAATTTACAA
AGTTAAGTGTTTAGATctcttttgaaaacatttttgtctCAAGTTTAGGC
TTGGATATGTCCTCAAGATGTATTTTAAATGATTACAGGTTGATGGATGC
AATGTCAAACCATTCAAAGTAAAATCTGTTCTGCAAACTGATCATGTAAA
AGCATGTACTTCTTCTTATTCAAGAACATTGACTGTGATTTCAGAAACAG
GTGAATTTTATTTAGTTTGGCGTATACTTGTTGCAAAGTAATGACTGCCA
GTACATTCTTAAATACACTCTCCTTGGCTCAATCTAGGCTGCAAATAAGC
ATTGTTAGTCTTCAGTTGCAAAAAATGGTGGAATGACTGAAAGTCCTTTT
GTGCACGTcagtttttaatgctttattCATATAGGGAGTTTCGGACTGCG
TTTAATAAAAATTCATAACAAACAGACTTGTACTTTTTATTTGCAACCCT
TGCCCGATTATTACAAATTTGGATTATAGTATAATCATTAGTATAATTAG
TATAATATTGTAGTTCTTTTTATTTCATGAGTATCGACAGGCAACTGttt
gaatattattattatggactttttggttatttttattCGAATAAAACATA
TATAGAGAGTATTTTTAATTACTTATATTTACCTTAGGATCAACTCATCa
atgtcaaatttatttttgtaaatgcacAGAAGAGTTCAATACTTTGGTAC
ATCTGGATCTATGGGCAGTAACACCGATAAAGCCAAATACAgttatttca
atgaatttgttACACCTTTTTGTTGCATTACAGTTGGAAGGGAAAATATC
TTTTTCGTCTTTTTGTGATGGTTTCTCTTGGAAAAGCGGAGTGGTTGATC
ATGACCTGGTAAGATACTATATGggtgaagaaatttctaaaatttttgtc
caactatcttctacCAGGGGATTGGGTGGCAGAGCAACATATGTAATGCA
TGCATTTTGTTCTTATTAGGACTCTAGTACTGTATATATTCTCATTTCAT
AAGAAACATTATAATACCCAACTTCAAAATTgagatttattgaaaaatat
tgattagAGATCTATTTTTAAGgtcactttttgttttgaaccaATGAAGC
AAAAGCTGTCCTTCCCAGGCAAAACAAATTGACATCTTAACTattttcaa
tctggcgtttgtacAAAAACCAGGCAAGCCGTGCAACTTTGATGTAATTT
AACTCGTTTCAAATTCTACCATACATATTCCACTCTAGCCCCTGGCTATA
CCTCATTTGCTTGAACGGagcaaacacaaaaaaatctacACAATTCTATA
ATCCAAAAAAAATGTTACAAGCAAAAACCGCACAGTAAATTCTCTTGATG
TTGATCCTGATCTCtacttttcccttttttctatatcaagtattttgaga
aaaaacaatCAACAATCAGCATTTCAAAAGGCATCTCCACTGTGATAATT
TTTAGTCGTTCAGTTAGGagagaaatatattttgaaaaaaacgtaCTTTT
TAGAAGAGATACCTGAACCGCATGACCCAAACGGATTCATTAGATCAATT
CAGACATTTCCGTCGACAATTAACAAGTCTGAAGACAATATGCCCGAACT
ATGATGGTTTGGAAAAGTGTGCATCTTGCCCCAAGGTATTAAAAAATTTA
agtctttactttttttaaacataaacaAGCTACCGTATGTCCATTTTGAT
CAAGTGATTCCCTATCCTcagtaatttttgaatttttatgtaaCTTTGCT
TGTCTCAAAAGATTGTGGTGTCAAACAAAACATTGGGGACTGTTTGTAAA
CTGCTGTAAGATATTTATTTTGCATCGTAGAATATGAAATTACACatata
aatcaaaatatttttaaattggaCAATTTGATTCTTTTAAGGAGAATGGA
AGTATTTTCTACTGCTTTGACGCCAACTTTGGACTTGTGTTAAAAAGCTC
TGCTTCTAAATCAAAGAGACTCGCTATGCGGTCGGAAAATCTATTTATCC
TTGATGAGGAAGTAAAAACCTTTATGGAAAGCTACGATGATACTTTGAAG
ACAAAGGTACAGGATTTAATTACGTTGTGAACTTTTATTAaaagattaaa
atatttttcaagtccGTTAAAGGCTTTTTATTGACAATCAATGTTTTGAA
ATAATAAACTAACTCCAAATTGCTACACAGTGTTTCATGCTATGCAGTCG
TCAGATAATTCGTTTGTGGTTGTTTTTTGCAACCATTCAGACATTCTTCA
GCACTGTGTgactctatttttcttttttacttaatGTATCAacaaataga
aaatttcaaggtaaatttttcattcaaacgaATATAAACTTGAGCCTAAA
GGCGTGTGTTTTCATTCAGTTGTTCTGATTGTTGATAAAATAGACGATTA
ATAATAACATCTtaagaaattgattttgtaaTGATTTGTAGAATGAAATT
TTGGGAATCTGCTCAAAATTTGCGAATTTGTGAAATTCTATTTTAATaaa
gtaattttttcaattggCTTAGGATTGCAGCAATTTCCAAGCTGGCAACA
ATTTACGGTCAAAACGAAAAACGAAGAAACTCAGTGTAACTGGAGTATTT
GGTAcattaagtggattaattttcacgtGGACTTTTTTTTGCGAATTAGG
CTCTTTTTTacctgatttttttcatttagctgatgattttaaattttttc
atagaggactaattttggcaaagatggctgaaattcgcgaaaatcgcaaa
aattaatccacgtgaaatttaatccacttaaggtatgtcTTGTCGTCATG
AGTTCCCGAAGCTTTTCTTGAATATGCAACACGGTGAAAGGTAATGATTC
AGAATTGCAGTAATGCATAAACGAGCAGtttttattctcaacttcaagCG
TGCTAGAATCATAGAACAGTGAATACCTAGGGTACTTTAGTTTTTTGGCC
TTGGAACAGTTTTTCCGTCGAAACAAAGATGACAGCATTAAGATAAATTT
TTTGTtagaaatcttaaattttttccATCTTAGCAGTAGAGAACAGCTAG
CCGATATCTagtttgaaattagaaaatGGGTCCAATATAACACGGAAACA
CTTCTTATAATACATAATCTTCAAGTTTACAATTTGTCAAGCTTTTAAAN
TTCTATCTTAGCAATAGAGAACAGCTAGCCGATATCTagtttgaaattag
aaaatGGGTCCAATATAACACGGAAACACTTCTTATAATACATAATCTTC
AAGTTTACAATTTGTCAAGCTTTTAAAACCAGAATTTGAGACGGATAGAA
CTCCAGTGGTTGTGTAACACAAGGAGTGttgataagatttttttattgtt
atatCATCATCAGAAATAGTAGTTGAATTGTTGTTTTAGATTGGGCTACG
CCGTTCTTCTCCTTGATCAGATACTGAACGATACAGAAAAAAAGAGGTTG
GATGTGCACATCATATATGATATTGCATGCGTTTTGAAGTCACATTTGTA
GGTAGAAAAttaggaaaacttttttttctaattaTCATACctcatttaaa
atttcttttttcaaaagagtGCAAATAACTCTATATAATAACTCTCTAAG
ACTTTTTGTTTTATGTAAATCACTNGGTATCCAAGGTAATTTAACGATTG
GTAGTTGCTCTGGATCATTTCGATTGTCGGTTGTCTGGTTCCTGGTTCTG
TCGTAATCGTTTGCGAAACGGGTTAAAGTGTTACGATCATAACCGTTCTC
GACAAAGTTATTTATTaagaaatcaattttcttcCTGACGGAATCGGTCA
TCACAAATTCTGTACGCACGATTAAGAAATCCTGAGAATATACTCTTCAA
CACCTTTGGGTCATGAGCTGAATTAGGTTTAACTTGCACGTTAGTGAtcg
catttttacatttttaccaagcaggtcgaaatattgtttacacgaaaaat
atatacagaatgaccattaaaatgttatttaaattATAATCTACATTCGT
ATCAAAGTATGACACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNTTCTATCTTAGCAATAGAGAACAGCTAGCCGATATCTagttt
gaaattagaaaatGGGTCCAATATAACACGGAAACACTTCTTATAATACA
TAATCTTCAAGTTTACAATTTGTCAAGCTTTTAAAACCAGAATTTGAGAC
GGATAGAACTCCAGTGGTTGTGTAACACAAGGAGTGttgataagattttt
ttattgttttatcatcatcagaAATAGTAGTTGCATTGTTGTTTTAGATT
GGGCTACGCCGTTCTTCTCCTTGATCAGATACTGAACGATACAGAAAAAA
AGAGGTTGGATGTGCACATCATATATGATATTGCATGCGTTTTGAAGTCA
CATTTGCAGGTAGAAAAttaggaaaacttttttttctaatgATCATACct
catttaaaatttcttttttcaaaagagtGCAAATAACTCTATATAATAAC
TCTCTAAGACTTTTTGTTTTATGTAAATCACTGTAACATTTCTTTGTAGA
TATTGACTTAGATCACCGACCTACCTCTCCCATCTAATTTTAGCCTATTA
CACGTAAGACTGtatgttaatattttttacGTTATCTTTAGAAAAAGAAT
ACTTTTACCAAGTAtcaagatttcaaatttggcatcCCTGTTTTTCATTC
GTATGGTCACAGAGGAGACTGTCAGGTGATTATTGAATTCTATGATGGTT
TTTCTGctttcagaattttgaaaattttgcgatTTCCGCGAATTTTGAAc
agattcgcgaaaatttattcTCGCAAAAACACTTTTCAATAAAGTCTACG
CTCGACCATAAATTCTCCAACAGCTTGGAATGTAATTTTGGGATACCTTT
TGTGTTGAtggttttgaaaaatctcagGCTTCAACGCTCTATCTtacaaa
aaatagtgaaaatcacaaataaaaacaaaagtcgacaaattttcttttct
cgcttcatttttttgaaagttaatttgttatttttaggTGAAAAATTCAA
TCAGAAGATTAGATTCTTTTGGCCTTATGGATGGTGAATTGATGGAACGC
CTCTGGTCATATCTTCGATCATTCTCAAAGATTACCAAGGAGATGACTCC
AGCTCACCGCACGGATTTACTTAGTGATGCTCTGCTGCATTTTGGCTCAA
AGAAAATGGGAAATATCGGTATGATTACTTTGAAAAGTTCTATACTAGTG
TTACATAATTATGATATTTTTAAGCTGATTAATCACTTGGTGTCATCTAT
TAAAGCTTTGTTTATCACTGGTAACGCGAAACATTTTTAAATCTTTACTT
AGGctttacttttattttcttttaggaAAATATCTCGTGTTTCTATTTCA
AAAAGCAACAAGAACTTTGAATTCTTGCGATTCAGAAATTAAAACGATTT
GCTCTAAACTGCCTGGTAAgttataattttttgatttagaATAACTTATT
CTAGTAAGCATGAAGCTTAGCGAATTGAGGTCTGCTTGAATAAGTTCTCG
TCAAAATCTATATTAGTTCAATTCTTAAAACAAGCTCTCGCTAAAAGTCA
TTTCGATATTGGTTTCGGTTGGTTCTAAAATTcttctttagaaaaacatt
gtaaatttagaagaatttaaaagaaaacagTTCAAAAAGGCCAGTCAAAT
TTTAACACTTTTTCAACACTATTCTAGTTAATTTGAAAATTCTATCATGA
CTGATTCATGATACCTTTTATAAAATTCCTAAAAGAATTGTTCAAAACAT
TTAGCTCATGTGGATGAAGAAATTATCAAATCATGGAAAAAAGAGGAGGA
TAACGCCGTAAGCCAAAATGGAAAACTTATACAGAAAAGTTAGTATTTTG
CAACGTCATCTTTTTCTCGTTACTGGAATGACTAAGTAGAAATCTGTCGA
ACCAATAAGGTATAAGCCCCGAAGGGGCCAGAGTGGAATCTGGTGGTAGG
ATTTGAAGCCAGTTAAATCCTACCAAATTATTTTTTTGCCGATCCCCCAT
ATTGAATTCCTGTACTGAAAAAACTTGGGTCAACCGCTAAATTAATTTTT
TGGCAAAATTTCTTCCTTTAAGGTTGAGTTATGGGGACTTAAATGTATTT
AAAAATATTTCGATTTTTGTACGTGCTGGAGTGCTTCAAAAATGAAGAAT
AACTCTTTTTTATTATTCTTTAGAAAAACTGACCCATTTGATTGACATGA
CAATTGACATGACAAACGACAAATGTCTGTAAGTAACAACGACTACGGAC
AACAAGATAATGACTGTACTCTGCTGACGACTTACATTTCTGAATATATA
TTGAGGTGTTGAGGATTTCTTTTTTTTTACCGCAGTAGCCATAAATTTAT
TTGAGACGTACGATACTTGAACACAAAGACTACTGACTCATAAGACAACT
AACAACTTGTAAATTTGTTTTCCTGTTCTTTTGACCAACTTTTCACTAGC
ATTGTGGAGTTAATATAGTTTTGAATGAGTAATTACTGCTTTGTGTATAT
TTTCAGCTCCTTCTGATTGGAAGCAAGTCTACTACCTTAAACTGAAAGAC
TTTTACAAAGAATCTGCACTGGTTTTAATGAGCGAAAAAGTATGCGATGC
TGCATCGCATCAACGAAAGGCAAACAGGTAAAACTTGCTTAAATAACGAA
GAATATGTTTACCCGTTGGTCTTTACCCCGCTGAAAGCTGAAAAAAGAAA
ATGATTGGAAGGCAAGCCAACGAAATGTGTTGAGCTTTACTCTTTCAGAC
TTGAATTCAGTTTCAAACTTTAAGGGGATAATCAGATGATTTTCGATATT
TGGCCTACAGATTCAAGCAATGGCTCTGAGAGAAACCTCCAAATTTTTTG
GCCCAGTTATTTTCCAAAGCTGATATAAGGGGCTAGGACTGTCATCACGA
GTATACTGTTTTAGCCTAATCTCAGAGTGAGAGTCCTACTATTTCGGCTA
TTTTCAAAGCGCAATATCTCAGCTTAGGAAAATGATTGGGTCAAAAAATG
GGCCATGGAGTGAGCCTATTGGCCAAATATAAAAAATCATGTGATTATCC
CTTTAACATTACATAGATTTCTCGAAATAAAAGAAATTATTTTCCGAGAT
TTTTCGATCCAATTGAGTGTAATTATGTTGTTATTTCATTCATTAGACTG
AAACGAAACTTGACATCGTTTGAAAAGCTTCATAAAGTGAATACGAGATG
GAAAACAACAGATCGCGACTTTCGAAGTCAACATATGACATTTTTGCGTG
TGAAGTCAAACGAAACAGCATCCACACTATATAGCAGATGTTCTGAAAGA
ATGATGCTCTTAACATTAAAGAAGCGATATGCAGGTATGTTCGATTCTGA
AAACACATTTTCATCAATTTACGCCGGCTACAGATCAGATTAGTAGATTT
TACTTGTAGGCCCCACCATGGTTGTGCTACACAGGGAAAACTTTTGAAAT
TCGGTCACTTATAATGGCCTGGAGATATTCGGTTTCAATTTCAACTAAAC
ACCTAACGTATTTTATCCTGTGCCCCTTTAAAAGTAGATTTATTAATAAA
TCTAAATATAATAGAATTCCAGAACTTTCAGACAAATTATCGAAATCCAA
TCTCAAAAAAAAAATTGTAAAAGGTAAACTCTGACTTCAAAGCAGAGAAG
GTTAGAAATAATGGCTGCTCAAACGATCTATCAATCAATAAGAGGAAATA
ATATCAGCAACAAAAAGGACTCAAAATTTCTTAAGATATTCAGAAATATC
CTCTACGAAAACTTTTTAGTAAATCCATCTCCCTAAAAAAATCCAAGAAT
AAAAAATCCAAGTAGAAATTTTTATTCCTTACGCTTCTAATTTTCTCTCA
CTTCAGATGGTTCGGCGATCGCGACGAGATTGAGCAAACAGATAAATAAA
GTATGTAAAGAAATCAAGAACCTGCTTGCCTCATACAATTCAATGAGATT
GGAAATGTCACCAAATTTCAAAACTATAGATTACAAAGATGCCCTCAACA
CAGAGGCTCCAATATATAATGAAGTGAACTTTGTATCCAACGTCAATGAG
GTTGGTGATATTATATTCCCAAGAAATTTCTTTTTTTAATGTTTTTGGTT
TTATGATGCGAAGGGTGCAGTGACAAAATTAACCGGAAAAAGAAAATTGT
TTCACGAAATAGACATCGAGTTTTTATTACCTATGAACTCATGCATTGGA
AGAAAGGATATGACTCAATTTTCTGTAAACACGCTAAAGCAAAAGAGAAT
TGAAAATGTTTATGTGTCTTGTAGAGTGCAACCAACGATTTATTGCGCTC
CAAGTAGAAGCGCCAATTAGGGGTAGCTCATTGGGTAATTGAAGTTGTAT
TAAAGTAATAATTGTTTCtactctctttctctctctttcTTAGGTAAGAA
GCTCGTCAATCCCTACGAATGTTGTGAAAACATTGGTTCAATTCTATTTG
AGAAAACAAAGAGCACAGGAGGAGATCGTTATAGTTCAAGAAGAAATGAA
AGCAACGTTGTCCTATTGGAGAGACCAGTTAAATTTTCTTGTTGAATGTG
CTTCGCAGCAAACGTCCTTTGGGTTGAAATATTTACTTCAAGAAAGAATA
TTCATTGTTAACAGCTTGACAAAGGAATTAGAACAATTATTTAATTCTGT
TACGAACATTGAGCTTCAGACAGAATATGTTAATCGTAACTTGGATGTTT
GTATCGATGAAATGGACGGTATTTACAGTGACAGTGATTGTTCAAGTGAG
GACGAAGAAGATTTATGTTCGAGTGGGAGCGACATTGAGGATTCAGATTT
TAATGGTTTATACATTTAGGCTTGATATTGCAACTTATGTNGGACGAAGA
AGATTTATGTTCGAGTGGGAGCGACATTGAGGATTCAGATTTTAATGGTT
TATACATTTAGGCTTGATATTGCAACTTATGTCCAtgtaaaaagttgttt
ttaatcCTTAACATTTTTATAGATTCATTAACCAAGGGTATCATCTAGAA
TTAGTCCGTtagattttaaagttttagcctcctaattgacaaaaaaatta
ggttttcttTCAAGCTTAGCTTGTAATGTCGGAACTCTGGAACTTAATAC
TTTTTATTTCCTTTCGAATAAAAGCCCGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044483XLOC_044483Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071594-exon-scaffold_62-1491911889:390521..390542TCONS_00071594-exon-scaffold_62-1491911889:390521..390542Clytia hemisphaericaexon
TCONS_00071594-exon-scaffold_62-1510915933:390521..390542TCONS_00071594-exon-scaffold_62-1510915933:390521..390542Clytia hemisphaericaexon
TCONS_00071594-exon-scaffold_62-1575043694:390521..390542TCONS_00071594-exon-scaffold_62-1575043694:390521..390542Clytia hemisphaericaexon
TCONS_00071594-exon-scaffold_62-1491911889:390959..391070TCONS_00071594-exon-scaffold_62-1491911889:390959..391070Clytia hemisphaericaexon
TCONS_00071594-exon-scaffold_62-1510915933:390959..391070TCONS_00071594-exon-scaffold_62-1510915933:390959..391070Clytia hemisphaericaexon
TCONS_00071594-exon-scaffold_62-1575043694:390959..391070TCONS_00071594-exon-scaffold_62-1575043694:390959..391070Clytia hemisphaericaexon
TCONS_00071594-exon-scaffold_62-1491911889:391508..391728TCONS_00071594-exon-scaffold_62-1491911889:391508..391728Clytia hemisphaericaexon
TCONS_00071594-exon-scaffold_62-1510915933:391508..391728TCONS_00071594-exon-scaffold_62-1510915933:391508..391728Clytia hemisphaericaexon
TCONS_00071594-exon-scaffold_62-1575043694:391508..391728TCONS_00071594-exon-scaffold_62-1575043694:391508..391728Clytia hemisphaericaexon
TCONS_00071594-exon-scaffold_62-1491911889:392374..392505TCONS_00071594-exon-scaffold_62-1491911889:392374..392505Clytia hemisphaericaexon
TCONS_00071594-exon-scaffold_62-1510915933:392374..392505TCONS_00071594-exon-scaffold_62-1510915933:392374..392505Clytia hemisphaericaexon
TCONS_00071594-exon-scaffold_62-1575043694:392374..392505TCONS_00071594-exon-scaffold_62-1575043694:392374..392505Clytia hemisphaericaexon
TCONS_00071594-exon-scaffold_62-1491911889:392762..392926TCONS_00071594-exon-scaffold_62-1491911889:392762..392926Clytia hemisphaericaexon
TCONS_00071594-exon-scaffold_62-1510915933:392762..392926TCONS_00071594-exon-scaffold_62-1510915933:392762..392926Clytia hemisphaericaexon
TCONS_00071594-exon-scaffold_62-1575043694:392762..392926TCONS_00071594-exon-scaffold_62-1575043694:392762..392926Clytia hemisphaericaexon
TCONS_00071594-exon-scaffold_62-1491911889:393393..393471TCONS_00071594-exon-scaffold_62-1491911889:393393..393471Clytia hemisphaericaexon
TCONS_00071594-exon-scaffold_62-1510915933:393393..393471TCONS_00071594-exon-scaffold_62-1510915933:393393..393471Clytia hemisphaericaexon
TCONS_00071594-exon-scaffold_62-1575043694:393393..393471TCONS_00071594-exon-scaffold_62-1575043694:393393..393471Clytia hemisphaericaexon
TCONS_00071594-exon-scaffold_62-1491911889:393653..393710TCONS_00071594-exon-scaffold_62-1491911889:393653..393710Clytia hemisphaericaexon
TCONS_00071594-exon-scaffold_62-1510915933:393653..393710TCONS_00071594-exon-scaffold_62-1510915933:393653..393710Clytia hemisphaericaexon
TCONS_00071594-exon-scaffold_62-1575043694:393653..393710TCONS_00071594-exon-scaffold_62-1575043694:393653..393710Clytia hemisphaericaexon
TCONS_00071594-exon-scaffold_62-1491911889:397268..397379TCONS_00071594-exon-scaffold_62-1491911889:397268..397379Clytia hemisphaericaexon
TCONS_00071594-exon-scaffold_62-1510915933:397268..397379TCONS_00071594-exon-scaffold_62-1510915933:397268..397379Clytia hemisphaericaexon
TCONS_00071594-exon-scaffold_62-1575043694:397268..397379TCONS_00071594-exon-scaffold_62-1575043694:397268..397379Clytia hemisphaericaexon
TCONS_00071594-exon-scaffold_62-1491911889:397612..397695TCONS_00071594-exon-scaffold_62-1491911889:397612..397695Clytia hemisphaericaexon
TCONS_00071594-exon-scaffold_62-1510915933:397612..397695TCONS_00071594-exon-scaffold_62-1510915933:397612..397695Clytia hemisphaericaexon
TCONS_00071594-exon-scaffold_62-1575043694:397612..397695TCONS_00071594-exon-scaffold_62-1575043694:397612..397695Clytia hemisphaericaexon
TCONS_00071594-exon-scaffold_62-1491911889:398008..398188TCONS_00071594-exon-scaffold_62-1491911889:398008..398188Clytia hemisphaericaexon
TCONS_00071594-exon-scaffold_62-1510915933:398008..398188TCONS_00071594-exon-scaffold_62-1510915933:398008..398188Clytia hemisphaericaexon
TCONS_00071594-exon-scaffold_62-1575043694:398008..398188TCONS_00071594-exon-scaffold_62-1575043694:398008..398188Clytia hemisphaericaexon
TCONS_00071594-exon-scaffold_62-1491911889:398346..398435TCONS_00071594-exon-scaffold_62-1491911889:398346..398435Clytia hemisphaericaexon
TCONS_00071594-exon-scaffold_62-1510915933:398346..398435TCONS_00071594-exon-scaffold_62-1510915933:398346..398435Clytia hemisphaericaexon
TCONS_00071594-exon-scaffold_62-1575043694:398346..398435TCONS_00071594-exon-scaffold_62-1575043694:398346..398435Clytia hemisphaericaexon
TCONS_00071594-exon-scaffold_62-1491911889:398775..398858TCONS_00071594-exon-scaffold_62-1491911889:398775..398858Clytia hemisphaericaexon
TCONS_00071594-exon-scaffold_62-1510915933:398775..398858TCONS_00071594-exon-scaffold_62-1510915933:398775..398858Clytia hemisphaericaexon
TCONS_00071594-exon-scaffold_62-1575043694:398775..398858TCONS_00071594-exon-scaffold_62-1575043694:398775..398858Clytia hemisphaericaexon
TCONS_00071594-exon-scaffold_62-1491911889:399527..399647TCONS_00071594-exon-scaffold_62-1491911889:399527..399647Clytia hemisphaericaexon
TCONS_00071594-exon-scaffold_62-1510915933:399527..399647TCONS_00071594-exon-scaffold_62-1510915933:399527..399647Clytia hemisphaericaexon
TCONS_00071594-exon-scaffold_62-1575043694:399527..399647TCONS_00071594-exon-scaffold_62-1575043694:399527..399647Clytia hemisphaericaexon
TCONS_00071594-exon-scaffold_62-1491911889:400167..400354TCONS_00071594-exon-scaffold_62-1491911889:400167..400354Clytia hemisphaericaexon
TCONS_00071594-exon-scaffold_62-1510915933:400167..400354TCONS_00071594-exon-scaffold_62-1510915933:400167..400354Clytia hemisphaericaexon
TCONS_00071594-exon-scaffold_62-1575043694:400167..400354TCONS_00071594-exon-scaffold_62-1575043694:400167..400354Clytia hemisphaericaexon
TCONS_00071594-exon-scaffold_62-1491911889:400877..401070TCONS_00071594-exon-scaffold_62-1491911889:400877..401070Clytia hemisphaericaexon
TCONS_00071594-exon-scaffold_62-1510915933:400877..401070TCONS_00071594-exon-scaffold_62-1510915933:400877..401070Clytia hemisphaericaexon
TCONS_00071594-exon-scaffold_62-1575043694:400877..401070TCONS_00071594-exon-scaffold_62-1575043694:400877..401070Clytia hemisphaericaexon
TCONS_00071594-exon-scaffold_62-1491911889:401414..402149TCONS_00071594-exon-scaffold_62-1491911889:401414..402149Clytia hemisphaericaexon
TCONS_00071594-exon-scaffold_62-1510915933:401414..402149TCONS_00071594-exon-scaffold_62-1510915933:401414..402149Clytia hemisphaericaexon
TCONS_00071594-exon-scaffold_62-1575043694:401414..402149TCONS_00071594-exon-scaffold_62-1575043694:401414..402149Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_62supercontigscaffold_62:390521..402149 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.215937	0	5.39946	3.32735	3.66834	1.38788	3.87875	4.63782	3.90113	4.83894	2.11451	2.3556	1.11357	0.995328	1.24858	0.411841	0.408365	0.980829	0.249965	6.45279e-10	0.105126	1.23024	2.26048	3.01616	0.235478	0	0.438812	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00071594 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top