TCONS_00071593 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071593
Unique NameTCONS_00071593
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2897

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071593 ID=TCONS_00071593|Name=TCONS_00071593|organism=Clytia hemisphaerica|type=transcript|length=2897bp
CCTAAAAAACGAAATGGTTCAAAGATCAAATCAAAATGGATTGGtttaag
gaaaagaaaaacaaaaattgcagGACCACCTAAAATTACtaactttaaaa
tttcaaatgttcCAGTTACTAATGATGATAATGGTTACGACTGTGATgtg
gaaaattttgatgaacATGATGTTGGAACTTATGATGAAGACTTTGTACC
TAAAAAACAATGTTATGGTATTAACAAGGAGAAAGAATTAATTTGTTGGG
ACAAACATAACATTGATTATTGCTTGATTTATGCAATGAAATTTAACACT
TTCCCGAGCCATTGCTGCTTTTGTAACGATGAAGTTATCACATCTTTTGT
ATGGTGTAAATCATGCGGACCATTGTCCTTTTATTGTCATGATTGCGCtt
ataaaattcacaaaaacacACTCTTTCATTCATTGGTTGAAGTCCagGTT
GATGGATGCAATGTCAAACCATTCAAAGTAAAATCTGTTCTGCAAACTGA
TCATGTAAAAGCATGTACTTCTTCTTATTCAAGAACATTGACTGTGATTT
CAGAAACAGTTGGAAGGGAAAATATCTTTTTCGTCTTTTTGTGATGGTTT
CTCTTGGAAAAGCGGAGTGGTTGATCATGACCTGAAGAGATACCTGAACC
GCATGACCCAAACGGATTCATTAGATCAATTCAGACATTTCCGTCGACAA
TTAACAAGTCTGAAGACAATATGCCCGAACTATGATGGTTTGGAAAAGTG
TGCATCTTGCCCCAAGGAGAATGGAAGTATTTTCTACTGCTTTGACGCCA
ACTTTGGACTTGTGTTAAAAAGCTCTGCTTCTAAATCAAAGAGACTCGCT
ATGCGGTCGGAAAATCTATTTATCCTTGATGAGGAAGTAAAAACCTTTAT
GGAAAGCTACGATGATACTTTGAAGACAAAGGATTGCAGCAATTTCCAAG
CTGGCAACAATTTACGGTCAAAACGAAAAACGAAGAAACTCAGTgtatgt
cTTGTCGTCATGAGTTCCCGAAGCTTTTCTTGAATATGCAACACGGTGAA
AGATTGGGCTACGCCGTTCTTCTCCTTGATCAGATACTGAACGATACAGA
AAAAAAGAGGTTGGATGTGCACATCATATATGATATTGCATGCGTTTTGA
AGTCACATTTGCAGAAAAAGAATACTTTTACCAAGTAtcaagatttcaaa
tttggcatcCCTGTTTTTCATTCGTATGGTCACAGAGGAGACTGTCAGgT
GAAAAATTCAATCAGAAGATTAGATTCTTTTGGCCTTATGGATGGTGAAT
TGATGGAACGCCTCTGGTCATATCTTCGATCATTCTCAAAGATTACCAAG
GAGATGACTCCAGCTCACCGCACGGATTTACTTAGTGATGCTCTGCTGCA
TTTTGGCTCAAAGAAAATGGGAAATATCGgaAAATATCTCGTGTTTCTAT
TTCAAAAAGCAACAAGAACTTTGAATTCTTGCGATTCAGAAATTAAAACG
ATTTGCTCTAAACTGCCTGCTCATGTGGATGAAGAAATTATCAAATCATG
GAAAAAAGAGGAGGATAACGCCGTAAGCCAAAATGGAAAACTTATACAGA
AAAAAAAACTGACCCATTTGATTGACATGACAATTGACATGACAAACGAC
AAATGTCTCTCCTTCTGATTGGAAGCAAGTCTACTACCTTAAACTGAAAG
ACTTTTACAAAGAATCTGCACTGGTTTTAATGAGCGAAAAAGTATGCGAT
GCTGCATCGCATCAACGAAAGGCAAACAGACTGAAACGAAACTTGACATC
GTTTGAAAAGCTTCATAAAGTGAATACGAGATGGAAAACAACAGATCGCG
ACTTTCGAAGTCAACATATGACATTTTTGCGTGTGAAGTCAAACGAAACA
GCATCCACACTATATAGCAGATGTTCTGAAAGAATGATGCTCTTAACATT
AAAGAAGCGATATGCAGATGGTTCGGCGATCGCGACGAGATTGAGCAAAC
AGATAAATAAAGTATGTAAAGAAATCAAGAACCTGCTTGCCTCATACAAT
TCAATGAGATTGGAAATGTCACCAAATTTCAAAACTATAGATTACAAAGA
TGCCCTCAACACAGAGGCTCCAATATATAATGAAGTGAACTTTGTATCCA
ACGTCAATGAGGTAAGAAGCTCGTCAATCCCTACGAATGTTGTGAAAACA
TTGGTTCAATTCTATTTGAGAAAACAAAGAGCACAGGAGGAGATCGTTAT
AGTTCAAGAAGAAATGAAAGCAACGTTGTCCTATTGGAGAGACCAGTTAA
ATTTTCTTGTTGAATGTGCTTCGCAGCAAACGTCCTTTGGGTTGAAATAT
TTACTTCAAGAAAGAATATTCATTGTTAACAGCTTGACAAAGGAATTAGA
ACAATTATTTAATTCTGTTACGAACATTGAGCTTCAGACAGAATATGTTA
ATCGTAACTTGGATGTTTGTATCGATGAAATGGACGGTATTTACAGTGAC
AGTGATTGTTCAAGTGAGGACGAAGAAGATTTATGTTCGAGTGGGAGCGA
CATTGAGGATTCAGATTTTAATGGTTTATACATTTAGGCTTGATATTGCA
ACTTATGTNGGACGAAGAAGATTTATGTTCGAGTGGGAGCGACATTGAGG
ATTCAGATTTTAATGGTTTATACATTTAGGCTTGATATTGCAACTTATGT
CCAtgtaaaaagttgtttttaatcCTTAACATTTTTATAGATTCATTAAC
CAAGGGTATCATCTAGAATTAGTCCGTtagattttaaagttttagcctcc
taattgacaaaaaaattaggttttcttTCAAGCTTAGCTTGTAATGTCGG
AACTCTGGAACTTAATACTTTTTATTTCCTTTCGAATAAAAGCCCGC
Run BLAST on NCBI

transcript from alignment at scaffold_62:390096..402149+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071593 ID=TCONS_00071593|Name=TCONS_00071593|organism=Clytia hemisphaerica|type=transcript|length=12054bp|location=Sequence derived from alignment at scaffold_62:390096..402149+ (Clytia hemisphaerica)
CCTAAAAAACGAAATGGTTCAAAGATCAAATCAAAATGGATTGGtttaag
gaaaagaaaaacaaaaattgcagGACCACCTAAAATTACtaactttaaaa
tttcaaatgttcCAGTTACTAATGATGATAATGGTTACGACTGTGATgtg
gaaaattttgatgaacATGATGTTGGAACTTATGATGAAGACTTTGTACC
TAAAAAACAATGTTATGGTATTAACAAGGAGAAAGAATTAATTTGTTGGG
ACAAACATAACATTGATTATTGCTTGATTTATGCAATGAAATTTAACACT
TTCCCGAGCCATTGCTGCTTTTGTAACGATGAAGTTATCACATCTTTTGT
ATGGTGTAAATCATGCGGACCATTGTCCTTTTATTGTCATGATTGCGCtt
ataaaattcacaaaaacacACTCTTTCATTCATTGGTTGAAGTCCaggtt
tgtttgttttcttcTGGTCTGTCTATAATAGGCACCCTATTGGAATTTCA
TTGtggttgatatttttcaaattcgaaaGTGGGGGCTGGGTTGATGACAA
GTTTCATATAGAGGTTTCCCTATGTGAGTGGGATGCCTTTGNGGGCTGGG
TTGATGACAAGTTTCATATAGAGGTTTCCCTATGTGAGTGAGATGACTTT
TTCCAGATGGAGGTCAGAGAGTTTATTGTTGATTTCAAAGTTGAGGGAGT
TAAGGTTGAGGAATATTCTCgaatatttattaaaaagaacaaaaggTCTG
CTCATACTTCTGAAGAAATTTACAAAGTTAAGTGTTTAGATctcttttga
aaacatttttgtctCAAGTTTAGGCTTGGATATGTCCTCAAGATGTATTT
TAAATGATTACAGGTTGATGGATGCAATGTCAAACCATTCAAAGTAAAAT
CTGTTCTGCAAACTGATCATGTAAAAGCATGTACTTCTTCTTATTCAAGA
ACATTGACTGTGATTTCAGAAACAGGTGAATTTTATTTAGTTTGGCGTAT
ACTTGTTGCAAAGTAATGACTGCCAGTACATTCTTAAATACACTCTCCTT
GGCTCAATCTAGGCTGCAAATAAGCATTGTTAGTCTTCAGTTGCAAAAAA
TGGTGGAATGACTGAAAGTCCTTTTGTGCACGTcagtttttaatgcttta
ttCATATAGGGAGTTTCGGACTGCGTTTAATAAAAATTCATAACAAACAG
ACTTGTACTTTTTATTTGCAACCCTTGCCCGATTATTACAAATTTGGATT
ATAGTATAATCATTAGTATAATTAGTATAATATTGTAGTTCTTTTTATTT
CATGAGTATCGACAGGCAACTGtttgaatattattattatggactttttg
gttatttttattCGAATAAAACATATATAGAGAGTATTTTTAATTACTTA
TATTTACCTTAGGATCAACTCATCaatgtcaaatttatttttgtaaatgc
acAGAAGAGTTCAATACTTTGGTACATCTGGATCTATGGGCAGTAACACC
GATAAAGCCAAATACAgttatttcaatgaatttgttACACCTTTTTGTTG
CATTACAGTTGGAAGGGAAAATATCTTTTTCGTCTTTTTGTGATGGTTTC
TCTTGGAAAAGCGGAGTGGTTGATCATGACCTGGTAAGATACTATATGgg
tgaagaaatttctaaaatttttgtccaactatcttctacCAGGGGATTGG
GTGGCAGAGCAACATATGTAATGCATGCATTTTGTTCTTATTAGGACTCT
AGTACTGTATATATTCTCATTTCATAAGAAACATTATAATACCCAACTTC
AAAATTgagatttattgaaaaatattgattagAGATCTATTTTTAAGgtc
actttttgttttgaaccaATGAAGCAAAAGCTGTCCTTCCCAGGCAAAAC
AAATTGACATCTTAACTattttcaatctggcgtttgtacAAAAACCAGGC
AAGCCGTGCAACTTTGATGTAATTTAACTCGTTTCAAATTCTACCATACA
TATTCCACTCTAGCCCCTGGCTATACCTCATTTGCTTGAACGGagcaaac
acaaaaaaatctacACAATTCTATAATCCAAAAAAAATGTTACAAGCAAA
AACCGCACAGTAAATTCTCTTGATGTTGATCCTGATCTCtacttttccct
tttttctatatcaagtattttgagaaaaaacaatCAACAATCAGCATTTC
AAAAGGCATCTCCACTGTGATAATTTTTAGTCGTTCAGTTAGGagagaaa
tatattttgaaaaaaacgtaCTTTTTAGAAGAGATACCTGAACCGCATGA
CCCAAACGGATTCATTAGATCAATTCAGACATTTCCGTCGACAATTAACA
AGTCTGAAGACAATATGCCCGAACTATGATGGTTTGGAAAAGTGTGCATC
TTGCCCCAAGGTATTAAAAAATTTAagtctttactttttttaaacataaa
caAGCTACCGTATGTCCATTTTGATCAAGTGATTCCCTATCCTcagtaat
ttttgaatttttatgtaaCTTTGCTTGTCTCAAAAGATTGTGGTGTCAAA
CAAAACATTGGGGACTGTTTGTAAACTGCTGTAAGATATTTATTTTGCAT
CGTAGAATATGAAATTACACatataaatcaaaatatttttaaattggaCA
ATTTGATTCTTTTAAGGAGAATGGAAGTATTTTCTACTGCTTTGACGCCA
ACTTTGGACTTGTGTTAAAAAGCTCTGCTTCTAAATCAAAGAGACTCGCT
ATGCGGTCGGAAAATCTATTTATCCTTGATGAGGAAGTAAAAACCTTTAT
GGAAAGCTACGATGATACTTTGAAGACAAAGGTACAGGATTTAATTACGT
TGTGAACTTTTATTAaaagattaaaatatttttcaagtccGTTAAAGGCT
TTTTATTGACAATCAATGTTTTGAAATAATAAACTAACTCCAAATTGCTA
CACAGTGTTTCATGCTATGCAGTCGTCAGATAATTCGTTTGTGGTTGTTT
TTTGCAACCATTCAGACATTCTTCAGCACTGTGTgactctatttttcttt
tttacttaatGTATCAacaaatagaaaatttcaaggtaaatttttcattc
aaacgaATATAAACTTGAGCCTAAAGGCGTGTGTTTTCATTCAGTTGTTC
TGATTGTTGATAAAATAGACGATTAATAATAACATCTtaagaaattgatt
ttgtaaTGATTTGTAGAATGAAATTTTGGGAATCTGCTCAAAATTTGCGA
ATTTGTGAAATTCTATTTTAATaaagtaattttttcaattggCTTAGGAT
TGCAGCAATTTCCAAGCTGGCAACAATTTACGGTCAAAACGAAAAACGAA
GAAACTCAGTGTAACTGGAGTATTTGGTAcattaagtggattaattttca
cgtGGACTTTTTTTTGCGAATTAGGCTCTTTTTTacctgatttttttcat
ttagctgatgattttaaattttttcatagaggactaattttggcaaagat
ggctgaaattcgcgaaaatcgcaaaaattaatccacgtgaaatttaatcc
acttaaggtatgtcTTGTCGTCATGAGTTCCCGAAGCTTTTCTTGAATAT
GCAACACGGTGAAAGGTAATGATTCAGAATTGCAGTAATGCATAAACGAG
CAGtttttattctcaacttcaagCGTGCTAGAATCATAGAACAGTGAATA
CCTAGGGTACTTTAGTTTTTTGGCCTTGGAACAGTTTTTCCGTCGAAACA
AAGATGACAGCATTAAGATAAATTTTTTGTtagaaatcttaaattttttc
cATCTTAGCAGTAGAGAACAGCTAGCCGATATCTagtttgaaattagaaa
atGGGTCCAATATAACACGGAAACACTTCTTATAATACATAATCTTCAAG
TTTACAATTTGTCAAGCTTTTAAANTTCTATCTTAGCAATAGAGAACAGC
TAGCCGATATCTagtttgaaattagaaaatGGGTCCAATATAACACGGAA
ACACTTCTTATAATACATAATCTTCAAGTTTACAATTTGTCAAGCTTTTA
AAACCAGAATTTGAGACGGATAGAACTCCAGTGGTTGTGTAACACAAGGA
GTGttgataagatttttttattgttatatCATCATCAGAAATAGTAGTTG
AATTGTTGTTTTAGATTGGGCTACGCCGTTCTTCTCCTTGATCAGATACT
GAACGATACAGAAAAAAAGAGGTTGGATGTGCACATCATATATGATATTG
CATGCGTTTTGAAGTCACATTTGTAGGTAGAAAAttaggaaaactttttt
ttctaattaTCATACctcatttaaaatttcttttttcaaaagagtGCAAA
TAACTCTATATAATAACTCTCTAAGACTTTTTGTTTTATGTAAATCACTN
GGTATCCAAGGTAATTTAACGATTGGTAGTTGCTCTGGATCATTTCGATT
GTCGGTTGTCTGGTTCCTGGTTCTGTCGTAATCGTTTGCGAAACGGGTTA
AAGTGTTACGATCATAACCGTTCTCGACAAAGTTATTTATTaagaaatca
attttcttcCTGACGGAATCGGTCATCACAAATTCTGTACGCACGATTAA
GAAATCCTGAGAATATACTCTTCAACACCTTTGGGTCATGAGCTGAATTA
GGTTTAACTTGCACGTTAGTGAtcgcatttttacatttttaccaagcagg
tcgaaatattgtttacacgaaaaatatatacagaatgaccattaaaatgt
tatttaaattATAATCTACATTCGTATCAAAGTATGACACTNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCTATCTTAGCAATAG
AGAACAGCTAGCCGATATCTagtttgaaattagaaaatGGGTCCAATATA
ACACGGAAACACTTCTTATAATACATAATCTTCAAGTTTACAATTTGTCA
AGCTTTTAAAACCAGAATTTGAGACGGATAGAACTCCAGTGGTTGTGTAA
CACAAGGAGTGttgataagatttttttattgttttatcatcatcagaAAT
AGTAGTTGCATTGTTGTTTTAGATTGGGCTACGCCGTTCTTCTCCTTGAT
CAGATACTGAACGATACAGAAAAAAAGAGGTTGGATGTGCACATCATATA
TGATATTGCATGCGTTTTGAAGTCACATTTGCAGGTAGAAAAttaggaaa
acttttttttctaatgATCATACctcatttaaaatttcttttttcaaaag
agtGCAAATAACTCTATATAATAACTCTCTAAGACTTTTTGTTTTATGTA
AATCACTGTAACATTTCTTTGTAGATATTGACTTAGATCACCGACCTACC
TCTCCCATCTAATTTTAGCCTATTACACGTAAGACTGtatgttaatattt
tttacGTTATCTTTAGAAAAAGAATACTTTTACCAAGTAtcaagatttca
aatttggcatcCCTGTTTTTCATTCGTATGGTCACAGAGGAGACTGTCAG
GTGATTATTGAATTCTATGATGGTTTTTCTGctttcagaattttgaaaat
tttgcgatTTCCGCGAATTTTGAAcagattcgcgaaaatttattcTCGCA
AAAACACTTTTCAATAAAGTCTACGCTCGACCATAAATTCTCCAACAGCT
TGGAATGTAATTTTGGGATACCTTTTGTGTTGAtggttttgaaaaatctc
agGCTTCAACGCTCTATCTtacaaaaaatagtgaaaatcacaaataaaaa
caaaagtcgacaaattttcttttctcgcttcatttttttgaaagttaatt
tgttatttttaggTGAAAAATTCAATCAGAAGATTAGATTCTTTTGGCCT
TATGGATGGTGAATTGATGGAACGCCTCTGGTCATATCTTCGATCATTCT
CAAAGATTACCAAGGAGATGACTCCAGCTCACCGCACGGATTTACTTAGT
GATGCTCTGCTGCATTTTGGCTCAAAGAAAATGGGAAATATCGGTATGAT
TACTTTGAAAAGTTCTATACTAGTGTTACATAATTATGATATTTTTAAGC
TGATTAATCACTTGGTGTCATCTATTAAAGCTTTGTTTATCACTGGTAAC
GCGAAACATTTTTAAATCTTTACTTAGGctttacttttattttcttttag
gaAAATATCTCGTGTTTCTATTTCAAAAAGCAACAAGAACTTTGAATTCT
TGCGATTCAGAAATTAAAACGATTTGCTCTAAACTGCCTGGTAAgttata
attttttgatttagaATAACTTATTCTAGTAAGCATGAAGCTTAGCGAAT
TGAGGTCTGCTTGAATAAGTTCTCGTCAAAATCTATATTAGTTCAATTCT
TAAAACAAGCTCTCGCTAAAAGTCATTTCGATATTGGTTTCGGTTGGTTC
TAAAATTcttctttagaaaaacattgtaaatttagaagaatttaaaagaa
aacagTTCAAAAAGGCCAGTCAAATTTTAACACTTTTTCAACACTATTCT
AGTTAATTTGAAAATTCTATCATGACTGATTCATGATACCTTTTATAAAA
TTCCTAAAAGAATTGTTCAAAACATTTAGCTCATGTGGATGAAGAAATTA
TCAAATCATGGAAAAAAGAGGAGGATAACGCCGTAAGCCAAAATGGAAAA
CTTATACAGAAAAGTTAGTATTTTGCAACGTCATCTTTTTCTCGTTACTG
GAATGACTAAGTAGAAATCTGTCGAACCAATAAGGTATAAGCCCCGAAGG
GGCCAGAGTGGAATCTGGTGGTAGGATTTGAAGCCAGTTAAATCCTACCA
AATTATTTTTTTGCCGATCCCCCATATTGAATTCCTGTACTGAAAAAACT
TGGGTCAACCGCTAAATTAATTTTTTGGCAAAATTTCTTCCTTTAAGGTT
GAGTTATGGGGACTTAAATGTATTTAAAAATATTTCGATTTTTGTACGTG
CTGGAGTGCTTCAAAAATGAAGAATAACTCTTTTTTATTATTCTTTAGAA
AAACTGACCCATTTGATTGACATGACAATTGACATGACAAACGACAAATG
TCTGTAAGTAACAACGACTACGGACAACAAGATAATGACTGTACTCTGCT
GACGACTTACATTTCTGAATATATATTGAGGTGTTGAGGATTTCTTTTTT
TTTACCGCAGTAGCCATAAATTTATTTGAGACGTACGATACTTGAACACA
AAGACTACTGACTCATAAGACAACTAACAACTTGTAAATTTGTTTTCCTG
TTCTTTTGACCAACTTTTCACTAGCATTGTGGAGTTAATATAGTTTTGAA
TGAGTAATTACTGCTTTGTGTATATTTTCAGCTCCTTCTGATTGGAAGCA
AGTCTACTACCTTAAACTGAAAGACTTTTACAAAGAATCTGCACTGGTTT
TAATGAGCGAAAAAGTATGCGATGCTGCATCGCATCAACGAAAGGCAAAC
AGGTAAAACTTGCTTAAATAACGAAGAATATGTTTACCCGTTGGTCTTTA
CCCCGCTGAAAGCTGAAAAAAGAAAATGATTGGAAGGCAAGCCAACGAAA
TGTGTTGAGCTTTACTCTTTCAGACTTGAATTCAGTTTCAAACTTTAAGG
GGATAATCAGATGATTTTCGATATTTGGCCTACAGATTCAAGCAATGGCT
CTGAGAGAAACCTCCAAATTTTTTGGCCCAGTTATTTTCCAAAGCTGATA
TAAGGGGCTAGGACTGTCATCACGAGTATACTGTTTTAGCCTAATCTCAG
AGTGAGAGTCCTACTATTTCGGCTATTTTCAAAGCGCAATATCTCAGCTT
AGGAAAATGATTGGGTCAAAAAATGGGCCATGGAGTGAGCCTATTGGCCA
AATATAAAAAATCATGTGATTATCCCTTTAACATTACATAGATTTCTCGA
AATAAAAGAAATTATTTTCCGAGATTTTTCGATCCAATTGAGTGTAATTA
TGTTGTTATTTCATTCATTAGACTGAAACGAAACTTGACATCGTTTGAAA
AGCTTCATAAAGTGAATACGAGATGGAAAACAACAGATCGCGACTTTCGA
AGTCAACATATGACATTTTTGCGTGTGAAGTCAAACGAAACAGCATCCAC
ACTATATAGCAGATGTTCTGAAAGAATGATGCTCTTAACATTAAAGAAGC
GATATGCAGGTATGTTCGATTCTGAAAACACATTTTCATCAATTTACGCC
GGCTACAGATCAGATTAGTAGATTTTACTTGTAGGCCCCACCATGGTTGT
GCTACACAGGGAAAACTTTTGAAATTCGGTCACTTATAATGGCCTGGAGA
TATTCGGTTTCAATTTCAACTAAACACCTAACGTATTTTATCCTGTGCCC
CTTTAAAAGTAGATTTATTAATAAATCTAAATATAATAGAATTCCAGAAC
TTTCAGACAAATTATCGAAATCCAATCTCAAAAAAAAAATTGTAAAAGGT
AAACTCTGACTTCAAAGCAGAGAAGGTTAGAAATAATGGCTGCTCAAACG
ATCTATCAATCAATAAGAGGAAATAATATCAGCAACAAAAAGGACTCAAA
ATTTCTTAAGATATTCAGAAATATCCTCTACGAAAACTTTTTAGTAAATC
CATCTCCCTAAAAAAATCCAAGAATAAAAAATCCAAGTAGAAATTTTTAT
TCCTTACGCTTCTAATTTTCTCTCACTTCAGATGGTTCGGCGATCGCGAC
GAGATTGAGCAAACAGATAAATAAAGTATGTAAAGAAATCAAGAACCTGC
TTGCCTCATACAATTCAATGAGATTGGAAATGTCACCAAATTTCAAAACT
ATAGATTACAAAGATGCCCTCAACACAGAGGCTCCAATATATAATGAAGT
GAACTTTGTATCCAACGTCAATGAGGTTGGTGATATTATATTCCCAAGAA
ATTTCTTTTTTTAATGTTTTTGGTTTTATGATGCGAAGGGTGCAGTGACA
AAATTAACCGGAAAAAGAAAATTGTTTCACGAAATAGACATCGAGTTTTT
ATTACCTATGAACTCATGCATTGGAAGAAAGGATATGACTCAATTTTCTG
TAAACACGCTAAAGCAAAAGAGAATTGAAAATGTTTATGTGTCTTGTAGA
GTGCAACCAACGATTTATTGCGCTCCAAGTAGAAGCGCCAATTAGGGGTA
GCTCATTGGGTAATTGAAGTTGTATTAAAGTAATAATTGTTTCtactctc
tttctctctctttcTTAGGTAAGAAGCTCGTCAATCCCTACGAATGTTGT
GAAAACATTGGTTCAATTCTATTTGAGAAAACAAAGAGCACAGGAGGAGA
TCGTTATAGTTCAAGAAGAAATGAAAGCAACGTTGTCCTATTGGAGAGAC
CAGTTAAATTTTCTTGTTGAATGTGCTTCGCAGCAAACGTCCTTTGGGTT
GAAATATTTACTTCAAGAAAGAATATTCATTGTTAACAGCTTGACAAAGG
AATTAGAACAATTATTTAATTCTGTTACGAACATTGAGCTTCAGACAGAA
TATGTTAATCGTAACTTGGATGTTTGTATCGATGAAATGGACGGTATTTA
CAGTGACAGTGATTGTTCAAGTGAGGACGAAGAAGATTTATGTTCGAGTG
GGAGCGACATTGAGGATTCAGATTTTAATGGTTTATACATTTAGGCTTGA
TATTGCAACTTATGTNGGACGAAGAAGATTTATGTTCGAGTGGGAGCGAC
ATTGAGGATTCAGATTTTAATGGTTTATACATTTAGGCTTGATATTGCAA
CTTATGTCCAtgtaaaaagttgtttttaatcCTTAACATTTTTATAGATT
CATTAACCAAGGGTATCATCTAGAATTAGTCCGTtagattttaaagtttt
agcctcctaattgacaaaaaaattaggttttcttTCAAGCTTAGCTTGTA
ATGTCGGAACTCTGGAACTTAATACTTTTTATTTCCTTTCGAATAAAAGC
CCGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044483XLOC_044483Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071593-exon-scaffold_62-1491911889:390096..390542TCONS_00071593-exon-scaffold_62-1491911889:390096..390542Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1510915933:390096..390542TCONS_00071593-exon-scaffold_62-1510915933:390096..390542Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1575043694:390096..390542TCONS_00071593-exon-scaffold_62-1575043694:390096..390542Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1491911889:390959..391070TCONS_00071593-exon-scaffold_62-1491911889:390959..391070Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1510915933:390959..391070TCONS_00071593-exon-scaffold_62-1510915933:390959..391070Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1575043694:390959..391070TCONS_00071593-exon-scaffold_62-1575043694:390959..391070Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1491911889:391654..391728TCONS_00071593-exon-scaffold_62-1491911889:391654..391728Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1510915933:391654..391728TCONS_00071593-exon-scaffold_62-1510915933:391654..391728Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1575043694:391654..391728TCONS_00071593-exon-scaffold_62-1575043694:391654..391728Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1491911889:392374..392505TCONS_00071593-exon-scaffold_62-1491911889:392374..392505Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1510915933:392374..392505TCONS_00071593-exon-scaffold_62-1510915933:392374..392505Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1575043694:392374..392505TCONS_00071593-exon-scaffold_62-1575043694:392374..392505Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1491911889:392762..392926TCONS_00071593-exon-scaffold_62-1491911889:392762..392926Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1510915933:392762..392926TCONS_00071593-exon-scaffold_62-1510915933:392762..392926Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1575043694:392762..392926TCONS_00071593-exon-scaffold_62-1575043694:392762..392926Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1491911889:393393..393455TCONS_00071593-exon-scaffold_62-1491911889:393393..393455Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1510915933:393393..393455TCONS_00071593-exon-scaffold_62-1510915933:393393..393455Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1575043694:393393..393455TCONS_00071593-exon-scaffold_62-1575043694:393393..393455Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1491911889:393653..393710TCONS_00071593-exon-scaffold_62-1491911889:393653..393710Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1510915933:393653..393710TCONS_00071593-exon-scaffold_62-1510915933:393653..393710Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1575043694:393653..393710TCONS_00071593-exon-scaffold_62-1575043694:393653..393710Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1491911889:397268..397379TCONS_00071593-exon-scaffold_62-1491911889:397268..397379Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1510915933:397268..397379TCONS_00071593-exon-scaffold_62-1510915933:397268..397379Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1575043694:397268..397379TCONS_00071593-exon-scaffold_62-1575043694:397268..397379Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1491911889:397612..397695TCONS_00071593-exon-scaffold_62-1491911889:397612..397695Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1510915933:397612..397695TCONS_00071593-exon-scaffold_62-1510915933:397612..397695Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1575043694:397612..397695TCONS_00071593-exon-scaffold_62-1575043694:397612..397695Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1491911889:398008..398188TCONS_00071593-exon-scaffold_62-1491911889:398008..398188Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1510915933:398008..398188TCONS_00071593-exon-scaffold_62-1510915933:398008..398188Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1575043694:398008..398188TCONS_00071593-exon-scaffold_62-1575043694:398008..398188Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1491911889:398346..398435TCONS_00071593-exon-scaffold_62-1491911889:398346..398435Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1510915933:398346..398435TCONS_00071593-exon-scaffold_62-1510915933:398346..398435Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1575043694:398346..398435TCONS_00071593-exon-scaffold_62-1575043694:398346..398435Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1491911889:398775..398858TCONS_00071593-exon-scaffold_62-1491911889:398775..398858Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1510915933:398775..398858TCONS_00071593-exon-scaffold_62-1510915933:398775..398858Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1575043694:398775..398858TCONS_00071593-exon-scaffold_62-1575043694:398775..398858Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1491911889:399194..399248TCONS_00071593-exon-scaffold_62-1491911889:399194..399248Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1510915933:399194..399248TCONS_00071593-exon-scaffold_62-1510915933:399194..399248Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1575043694:399194..399248TCONS_00071593-exon-scaffold_62-1575043694:399194..399248Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1491911889:399527..399647TCONS_00071593-exon-scaffold_62-1491911889:399527..399647Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1510915933:399527..399647TCONS_00071593-exon-scaffold_62-1510915933:399527..399647Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1575043694:399527..399647TCONS_00071593-exon-scaffold_62-1575043694:399527..399647Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1491911889:400167..400354TCONS_00071593-exon-scaffold_62-1491911889:400167..400354Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1510915933:400167..400354TCONS_00071593-exon-scaffold_62-1510915933:400167..400354Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1575043694:400167..400354TCONS_00071593-exon-scaffold_62-1575043694:400167..400354Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1491911889:400877..401070TCONS_00071593-exon-scaffold_62-1491911889:400877..401070Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1510915933:400877..401070TCONS_00071593-exon-scaffold_62-1510915933:400877..401070Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1575043694:400877..401070TCONS_00071593-exon-scaffold_62-1575043694:400877..401070Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1491911889:401414..402149TCONS_00071593-exon-scaffold_62-1491911889:401414..402149Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1510915933:401414..402149TCONS_00071593-exon-scaffold_62-1510915933:401414..402149Clytia hemisphaericaexon
TCONS_00071593-exon-scaffold_62-1575043694:401414..402149TCONS_00071593-exon-scaffold_62-1575043694:401414..402149Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_62supercontigscaffold_62:390096..402149 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.354133	0.000674295	0	0.0483782	0.902724	0.362218	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3.23651e-06	0	0.0111945	1.62376e-08	0	0	1.33366e-06	7.5652e-07	0	0.226581
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00071593 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top