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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071590 ID=TCONS_00071590|Name=TCONS_00071590|organism=Clytia hemisphaerica|type=transcript|length=536bp
GACCAAATATTTAACAAGAAAAAGAGcgggaaaaatctttttatagaaat
cGATGACAATGAAGATCCAGAGATAGCAAGATCCAAAATTCGCTCAAGTT
GCCCTGTCCTTATGGTTGAAAAGAGAAGTAAAGCAACACTAATCATCAAC
AAATCGGCCATTTTTGTGTCAGTGAATTTAGACTTGGCTATTGTTGCTTT
CCTTGGATCATATTACATCCTTAATAGGGATTACCCTCAGGAACTAGAAG
TGGTACTAACcttgtttcaaattttgatattcgaGGACTATTCGGCACCA
GCGCGGTGCCTAAAACAAGCCAACACGATTCTTACCAAGTATAATGCTTT
TCTTGGACATTAACTTAATGTTTATCGTTTATTTTTGCTTCCTTTTAATT
GGCTATGTGTTCTCGTGTGTACAAGTTTGTTAAAAGCAAACGGACCTTTG
ATTTATGATATCCTGACCCCTCAAGGGTCAAGAAAAACATGGGTTACAAA
TATTTCACCCTGTCCCTGTGTCGCATGACATTGGTT Run BLAST on NCBI transcript from alignment at scaffold_62:370655..371484+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071590 ID=TCONS_00071590|Name=TCONS_00071590|organism=Clytia hemisphaerica|type=transcript|length=830bp|location=Sequence derived from alignment at scaffold_62:370655..371484+ (Clytia hemisphaerica)
GACCAAATATTTAACAAGAAAAAGAGcgggaaaaatctttttatagaaat
cGATGTAAGTGTTAAAAATCACTTTAACTCAGAAAACTGTATTTTGAAAT
ATCTAGTTTTTTAATATTAAAATATTGGAATGTTGGTTTCAAAGTCTCAA
GATAAATGAATTTGGTAACAGAGTTAGATCATGATTGTGTGCTTTTGTAA
AGGAATACACGAGTAAAATATTATTAAATAGAAATATGCTTCCACAATTG
CCTCCTCCTATACAAATTGTCTTGATATTTTAGGACATGATCAATAactg
gaaaaaatcaaaaatatcaattaattgaaaatttttctttttatacagGA
CAATGAAGATCCAGAGATAGCAAGATCCAAAATTCGCTCAAGTTGCCCTG
TCCTTATGGTTGAAAAGAGAAGTAAAGCAACACTAATCATCAACAAATCG
GCCATTTTTGTGTCAGTGAATTTAGACTTGGCTATTGTTGCTTTCCTTGG
ATCATATTACATCCTTAATAGGGATTACCCTCAGGAACTAGAAGTGGTAC
TAACcttgtttcaaattttgatattcgaGGACTATTCGGCACCAGCGCGG
TGCCTAAAACAAGCCAACACGATTCTTACCAAGTATAATGCTTTTCTTGG
ACATTAACTTAATGTTTATCGTTTATTTTTGCTTCCTTTTAATTGGCTAT
GTGTTCTCGTGTGTACAAGTTTGTTAAAAGCAAACGGACCTTTGATTTAT
GATATCCTGACCCCTCAAGGGTCAAGAAAAACATGGGTTACAAATATTTC
ACCCTGTCCCTGTGTCGCATGACATTGGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00071590-exon-scaffold_62-1491911889:370655..370708 | TCONS_00071590-exon-scaffold_62-1491911889:370655..370708 | Clytia hemisphaerica | exon |
| TCONS_00071590-exon-scaffold_62-1510915933:370655..370708 | TCONS_00071590-exon-scaffold_62-1510915933:370655..370708 | Clytia hemisphaerica | exon |
| TCONS_00071590-exon-scaffold_62-1575043694:370655..370708 | TCONS_00071590-exon-scaffold_62-1575043694:370655..370708 | Clytia hemisphaerica | exon |
| TCONS_00071590-exon-scaffold_62-1491911889:371003..371484 | TCONS_00071590-exon-scaffold_62-1491911889:371003..371484 | Clytia hemisphaerica | exon |
| TCONS_00071590-exon-scaffold_62-1510915933:371003..371484 | TCONS_00071590-exon-scaffold_62-1510915933:371003..371484 | Clytia hemisphaerica | exon |
| TCONS_00071590-exon-scaffold_62-1575043694:371003..371484 | TCONS_00071590-exon-scaffold_62-1575043694:371003..371484 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_62 | supercontig | scaffold_62:370655..371484 + |
Blast
The following BLAST results are available for this feature:
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