|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071587 ID=TCONS_00071587|Name=TCONS_00071587|organism=Clytia hemisphaerica|type=transcript|length=5019bp
TAAAAGGAGCAATCAGAAAGACTCTGCAGAAAACATAACACCAAACAATT
GAACGTGAAAGATTTCTCATaaagtttttaatgatttgttAACATTTTAT
TAGTGGGTAGAAAGAAGTTTATTCCACAGAGAGTTTATAGATATATTTCG
ACCTGTAAAAAGggtgaaataaaaaatccagcaaCAGTTTTCAAAGTCTT
AGTATAAAGATGTGGTTACAGATTGCTTTAGCTGCTATCATTGTCTCGTT
CACTGCATTCTATTTGTACATGAAACATAGATTGTCTTACTGGAAACGCC
GGGGAATACCGGAAGATAAAGGACATTTCCCCTTCGGTAGCAAACATGCT
TGGGATTTTGTGCAAGGGAAAATGTCATTCACTCAAATGACAAATTTTGC
ATACGAAACACACCCTGGTGAAAAGGTCGTTGGAACATATGATATGTTTG
GAAGTCCTGGTCTGGTTATTCGTGATCCTGATATTGCTAAATTAATCTTG
GTCaaagattttgataatttcatGGAACGTAAACCAATTCATTACAACAT
GTATGACTCTAACAGTAAAAATAACCGATATTTCCCATACATGTTGACAG
AGCTTCGTGGCCAGCAATGGAAGAATGTAAGATCGTCATTAACACCTGTT
TTTACTAGCGGCAAACTGAAGAATATGATTCCACTCATACATAAAGTTGC
TGATAACTGTGAAACATACTTAGACAAGAATATTGGTGTTGAATTTGAGG
CGAAGGAGTTGTTAAAAGGGTACGCTTTGGATATAATCATTTCAACTGGA
TTTGGTTACGAGAATGACACTTTAAATAATCCAGAAAATATCTTCAAGAA
GCATGCTGATGTGATGATTGGGAAGACTTTCAGTTGGAAATTGATAGCTA
CAATTCTTCTGTTCATGATCTGCCCAAGGCTTCTCCGCTGGTTGGATTGG
GCCATGTTTGACAAAAACACAGTAGATTTCTTTGCAGCACTCATTGTTAA
AACTATCAAGGAGCGCAAAGAGAGTGGACAGAGAAGAAACGATTTGATAG
ATGTCTGTGTTGATATTTTGGAGAAAGAACGAAAAGAGAATGAGAAAAGT
GTAGAAGATGAAGAAGGGGCGAAAAGAAGAAATGacgaaatggagaaaat
aattATCGCCAATTCATTGATCATGTTTCTTGCAGGATTTGATACAGTCT
CAAACGCTTCGTCACTGATGATGTATTTCTTGGCAAAGCATCAAGATTGC
CAAGAAAGACTCTACCAAGAAGTTCAAGAAGCTATCGAATCCACCGGATC
TACAAACTTCGATTACGCTACCATCATGAATATGCCTTATAtggaaaaat
tcttccaagaaacCCTAAGAATGTANTCTACCATTATGAATATGCCTTAT
AtggaaaaattcttccaagaaacCTTCAGAATGTATCCTTTAACGCATTT
AGAAAGGTGCTCCAAGGAAGAATATAAGATCCCTGACACTGATATAGTGA
TCCCAAAAGGTATTTTCGTTCGATATGCGGCAACTGCTGTGGTGAAAGAT
GAGAAATATTACCCCAATCCTGAAGTATTCGACCCTGAGAATTACAGTGC
TGAAAAGAAAGTTGACAGACACCCGTTTGTCACTGGTGCCTTTGGACATG
GACCGAGGAATTGTATTGCTCAGCGATTCGCGACAATGGAAGTCAAAATT
GTGATTGCACGGTTGTTGAGCAAATATAAGATTGTACCATGCTCAAAAAC
TGTGGATGAACTGATTCCAGATCCAAGTTCAAGAAGTGGGCAACCGAAAG
GGGATATTTGGGTTACTGTTGAGAAAAGGTGAACAAAACAGTTGAAAGAT
TTCATGAAAACCATAGAGTATCAGTCAATATGAACCTCGTACAAACAGAT
ATacttatttcaactttttttttattataaaaccagacaatttttttaaa
tataaatttctaacaaaatttcaaaaattattttgtttttataaaaatgc
cTTGAATGATATATGACAGATTTTACttaatcgaccgccggaggcggttt
ctttcatagtggtacgctaatctcgttttgccttggctcgttactttgtc
taccatttactttcggttttttttacTAGATTACCCAGGTGTTTCTCTTT
TTTTTCTatgaatgtcttttattcggaatcgaataatcgagacatgaaaa
atggctatattgtaattattttcaatgaataatctaaaatgtactggaga
tgataTGTAGGCGTtgataatgtgcgcgcgctctttcgcgagggtgagat
gcgtgatggaaggcggtcgtttcagtgtggtttacatccacactgtgacc
tagtatatAAACATTTATTGTTATAAATAAGACCTAGTTTTAGCTGATTG
ATATGTGTACTTGCGACACTGAGAACCGTGTCTAGCATTAAAAGAATTCT
ATATTTTTGCCTGTTATGTTACTAACTAATAATGGTAGCAAAGCTGTGGT
TAGCCGACGGGTTGTCTTGATATTATAAATACATTTTTCTGTTTacagtt
ttagaaaaattttgctGAGAGCGGTATAATAAATTCAAttggaaaatatt
aaaaaatcaatCCCCAATGAATTTTATGAgttttaaaacacccctgtctc
acagcccctgtGCATCAATTTTTTTCCCGCAGTGGGATAAACATTTCTAT
CGTAATTTCATAATTCCCATTCAgtgaggatggttttggagaacaatatt
tttgattgaatttcgaAATGGGAGGtggaatcaaagtcaattttcctatg
gggctgaaattgttgGATATTTTTCTCCGCTCGGAATGAAATTTTGATCC
GATTTCAAGTTGGTAGCCCAACCGggtcaatgagacaggggtattgtAAA
TGATAGAATATCATACCCAGCTGGTAAATAAAACCCCCTCATTAATAGAT
Accatacccagctggcacacaacattggttcaacgttcatctaacgttac
atGGACGTTAACgtcaacgttgaaacaacgttgagtACCAGCTGGGTATG
GGATCTATTAATGAAGTTGTTTTATATCATTATCTTGATATAATAATTTT
CACTGAGTCACTGTGACAGGAGTGAGATATCAATTTTTTATCGtcgaaaa
attctttgaaaaaagaaacaaaacaaactatgcagcaaacataaaattat
aattcgaatcttttcaaacgttcaaacaaaaattttctaatttaattGTT
TATTAGCTAGTGCTCAAAATGAGCTTTGTATAATTTGCCCCAGCAtaaat
tacaaatatttttaaaattttgatattttgcttgaaatataATTTACAAA
CTTATCAACATAGATCAAAATTGAGCAACCTTATCATACTTCTCATATCA
CCATGCACCTTTTATTGTTATGTGCATGTCTGGTAATTGTGAATTGCAGA
TTCATTCCCCACAATGCTGTTCCAAAGACCGGAATGAAACGCCAGCCGCT
AAACCATATGCTACCAAACGGTCAAAAAGTAGCCTCGAGTGAACCAAAGA
CAGAGGAAGAGAAGGTGAAAGAGTTAAAAGATAAGCTAGTCCAAGAGAAA
TTAGCGGATCTAGCGAAAGCACAGGCGGAACAGAAAGAAGCTGCCACAGC
TGTCACTAACGAAGATCAAAAAAAGAAGCAGGAGAGTGATGAggaaaaat
atgtcaaaatggAAATGGGTTACCACGTACCAGGTACCATCGTTCATCAA
GGTACTTTTGAAGTTGACCCTAACACCATGCCCGGTTTTGGTGGAGATAT
GCCCGCTTATGGAGGTGGATACCCCTATGCTGGAGCATACCCTCAGCAAG
GTATGGGATACAATACTGGATACCCTGGGTACGGTAGTTATGGTATGTCT
CAATCATATGGTAATCATTTTGGGTAAATTTTGTTAAGCTcacgttttta
tataagaacatgcaaAAGTTTTTGAGCATTCGTGAGAATTTGATTTCTAA
CCCTAAGGttatataaaatgtttttattttcactattttgtgagtatttt
tgtccatttgtCTAAGAAATCGGGTCTTTTATTTAGAGCCTGCCAAGCCT
TACTGGCTCTTAATGTTTTGGTCCAAAGCCTTTCGATCTTATAtagtttt
gttcttataaaaattgcGTGATAGGCATACTTTATTTTACTAGATAGGCa
tattttattatatagttttgttcttataaaaattgcGTGATAGGCATACT
TTATTTTACTAGATAggcatattttatttttgctaaTATAGTATTTTACT
AACCACAATACGACCTTAGTTATTTTCTATTATCAATTTAAAACGTGATA
GATCTAGTTCAATTTGCGACACTGTATTAAAGCGATAATGTGTTATGACT
TATCTTAAGAACATTCCAAATAGAAGAAATGCCCGGGAGGGTGGCACCTA
TGCAAAAtcgggtacggggacgtgccgctggtcagggtcacttttttagg
CGCTgaaagatatctgacagggtcccaattCTACTAATTTTTAAGTTGTT
TATCTGACAGGGTAAGCTTTTGGTTATATTtaggacaattttcagggtag
aaattgggaagtttttcaatttttgctcaCTTTCATTTAAATGGgaagaa
aaaagttcaaatttaccAAGGATTCATATCTGGCAGAGGCTATTCTTTTC
AAACTTCAGCAGCACATCCCCGTCGGCCATCTAGGACAGTCCCCCCTCTC
GGAGAAAAGAAACTATTTGCAAGTACTCACCAAACGGGAATAAAAAGATT
TCGAAATACCATATATCCTGGCAAAAGATAAATGCAATTAAACAAATTTG
AAACAAGATAAACCCAGGTAGAACTTACTGTAATTCATAATTAGATGTCA
GTTTTTATGTAAATATCATTTTAGATAGAATTATAATCAAAttaattata
ttttgaaaatttggcaaaagtaTGAATGAATTTGATCAATCTACATGCGT
AAAATGTACTATGAAGATT Run BLAST on NCBI transcript from alignment at scaffold_62:314862..322508+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071587 ID=TCONS_00071587|Name=TCONS_00071587|organism=Clytia hemisphaerica|type=transcript|length=7647bp|location=Sequence derived from alignment at scaffold_62:314862..322508+ (Clytia hemisphaerica)
TAAAAGGAGCAATCAGAAAGACTCTGCAGAAAACATAACACCAAACAATT
GAACGTGAAAGATTTCTCATaaagtttttaatgatttgttAACATTTTAT
TAGTGGGTAGAAAGAAGTTTATTCCACAGAGAGTTTATAGATATATTTCG
ACCTGTAAAAAGggtgaaataaaaaatccagcaaCAGTTTTCAAAGTCTT
AGTATAAAGATGTGGTTACAGATTGCTTTAGCTGCTATCATTGTCTCGTT
CACTGCATTCTATTTGTACATGAAACATAGATTGTCTTACTGGAAACGCC
GGGGAATACCGGAAGATAAAGGACATTTCCCCTTCGGTAGCAAACATGCT
TGGGATTTTGTGCAAGGGAAAATGTCATTCACTCAAATGACAAATTTTGC
ATACGAAACACACCCTGGTGAAAAGGTCGTTGGAACATATGATATGTTTG
GAAGTCCTGGTCTGGTTATTCGTGATCCTGATATTGCTAAATTAATCTTG
GTCaaagattttgataatttcatGGAACGTAAACCAATTCATTACAACAT
GTATGACTCTAACAGTAAAAATAACCGATATTTCCCATACATGTTGACAG
AGCTTCGTGGCCAGCAATGGAAGAATGTAAGATCGTCATTAACACCTGTT
TTTACTAGCGGCAAACTGAAGAATATGATTCCACTCATACATAAAGTTGC
TGATAACTGTGAAACATACTTAGACAAGAATATTGGTGTTGAATTTGAGG
CGAAGGAGTTGTTAAAAGGGTACGCTTTGGATATAATCATTTCAACTGGA
TTTGGTTACGAGAATGACACTTTAAATAATCCAGAAAATATCTTCAAGAA
GCATGCTGATGTGATGATTGGGAAGACTTTCAGTTGGAAATTGATAGCTA
CAATTCTTCTGTTCATGATCTGCCCAAGGCTTCTCCGCTGGTTGGATTGG
GCCATGTTTGACAAAAACACAGTAGATTTCTTTGCAGCACTCATTGTTAA
AACTATCAAGGTAAGATTTTTCTTACGCGATTACTTTTAACAGTCGGTCC
ATAGGTGTAGATACCTTGCAAAATCTATGAacgagagcggtttttacgac
actgtaaatattgtctttgttttatcaaaagataatgaatatgtcataaa
cgtctgcactccctcataaattttgcagggtatctcgctacgcctatgtc
AGTCTATCTTAATTGCACTTATCATGTATTTGACTCTAAATTTAGAAGTG
AGACTTTTAGATTCTGAATTTTTACACCAATACACCATCACTTGATTCGT
TTAACGTGCGCATGCGTATTTTGTCGATTTCCACCTTTTGATCTCGagga
ggtaaacaaacctgtCTTTgcctagactggagtcgtttataatgcgtgta
atacagtagtaaaggcgttatatgataatacgataattgttacgggataa
tattagtttgtataaacgactggaagaatccggtgttccggccttataga
atccagaatccccggctagctacgcagaaacttgcgtagcgagaaaacaa
agggtttttttctgaaaacaaaagaaagcttTTTTTGGACGGGGGTGCTT
CCGTAAGAATTTGGTGCGCGAAAGGTAAggagaaattaatttttgatcaa
gcaacaacaaactctcaaaacaaaatgaaagacgaaaaaaaaaaagtttt
aacacACAACAAATcaacacacatttttttttcaagaaaagttttttttg
agcggggaaaaaaattataattgcaatattgacatgacattcttttgttt
ggagttagtttAAAACAAAcgagaaaaatttttcgagaGAGAAAATTGTT
GTGTGTTCTGATTTCTCCTTTTATGTGTTTCGACCAATGGTGTGCGTCTC
CATTGTtttttctaaaccaatcaaatcgatttacgaaatcaaaacaaacc
gtTTTTTTCCGAACAAGCCCCCTAgattttcaaagcttttttcacgTTCT
AATTGAACAAAGTCTTTATTTtggctattcatgatattttaCCTACCTGA
AAACTTCTTTTTACAATCACGgatcaatcaaaataaaaagctAGAAACTG
AAAATCTGCTTTATATGGCATTTTGATACCTTAAacacttttataagaaa
atctacAGTTTTTCAAGCTAGAGACAATTTAGAGTCCGCAAAACCTTAAC
ATGTCCctaacttattcttaatatttcgaaTATCGAAGCCAAatgtttct
tttaaaagaacggTTAAAAGTTATGCAAAGAGGCATACGTCAAAAAGACA
TCACCTTCACTTAGACTATCAGAAAGGGCTGCCAGCttcaaatgaaatta
ctttgaATTCTCTTTCAGGAGCGCAAAGAGAGTGGACAGAGAAGAAACGA
TTTGATAGATGTCTGTGTTGATATTTTGGAGAAAGAACGAAAAGAGAATG
AGAAAAGTGTAGAAGATGAAGAAGGGGCGAAAAGAAGAAATGacgaaatg
gagaaaataattATCGCCAATTCATTGATCATGTTTCTTGCAGGTAACCA
GCgaattatttcatttatttaagACTGCAATAAGTTTCCACAAGTGGTTG
TAGGAGATTAATTTACActcccctgtgtcacagactcgctggaaaatttg
acaaaaataatttcGTTTGCGCtgggaaaataccctagaatttcagcccc
actggaataTTGACGTTTGATTTCATCCCCTTTCGAGTATCAAtgcttca
aaaaaattgtacCCCACTGGATATTTTTAACCTTGGATCAATATATTATC
TCTCCCCAAAAAGGTTTCACTGGGGCTCTGGGATAGGGATGTCTTTGTAT
AGCTCAATTAATTCTTTTGGTTATCATTTACAAATAATTTCATCATTTCA
TTCAATAGGATTTGATACAGTCTCAAACGCTTCGTCACTGATGATGTATT
TCTTGGCAAAGCATCAAGATTGCCAAGAAAGACTCTACCAAGAAGTTCAA
GAAGCTATCGAATCCACCGGATCTACAAACTTCGATTACGCTACCATCAT
GAATATGCCTTATAtggaaaaattcttccaagaaacCCTAAGAATGTANT
CTACCATTATGAATATGCCTTATAtggaaaaattcttccaagaaacCTTC
AGAATGTATCCTTTAACGCATTTAGAAAGGTGCTCCAAGGAAGAATATAA
GATCCCTGACACTGATATAGTGATCCCAAAAGGTATTTTCGTTCGATATG
CGGCAACTGCTGTGGTGAAAGATGAGAAATATTACCCCAATCCTGAAGTA
TTCGACCCTGAGAATTACAGTGCTGAAAAGAAAGTTGACAGACACCCGTT
TGTCACTGGTGCCTTTGGACATGGACCGAGGAATTGTATTGCTCAGCGAT
TCGCGACAATGGAAGTCAAAATTGTGATTGCACGGTTGTTGAGCAAATAT
AAGATTGTACCATGCTCAAAAACTGTGGATGAACTGATTCCAGATCCAAG
TTCAAGAAGTGGGCAACCGAAAGGGGATATTTGGGTTACTGTTGAGAAAA
GGTGAACAAAACAGTTGAAAGATTTCATGAAAACCATAGAGTATCAGTCA
ATATGAACCTCGTACAAACAGATATacttatttcaactttttttttatta
taaaaccagacaatttttttaaatataaatttctaacaaaatttcaaaaa
ttattttgtttttataaaaatgccTTGAATGATATATGACAGATTTTACt
taatcgaccgccggaggcggtttctttcatagtggtacgctaatctcgtt
ttgccttggctcgttactttgtctaccatttactttcggttttttttacT
AGATTACCCAGGTGTTTCTCTTTTTTTTCTatgaatgtcttttattcgga
atcgaataatcgagacatgaaaaatggctatattgtaattattttcaatg
aataatctaaaatgtactggagatgataTGTAGGCGTtgataatgtgcgc
gcgctctttcgcgagggtgagatgcgtgatggaaggcggtcgtttcagtg
tggtttacatccacactgtgacctagtatatAAACATTTATTGTTATAAA
TAAGACCTAGTTTTAGCTGATTGATATGTGTACTTGCGACACTGAGAACC
GTGTCTAGCATTAAAAGAATTCTATATTTTTGCCTGTTATGTTACTAACT
AATAATGGTAGCAAAGCTGTGGTTAGCCGACGGGTTGTCTTGATATTATA
AATACATTTTTCTGTTTacagttttagaaaaattttgctGAGAGCGGTAT
AATAAATTCAAttggaaaatattaaaaaatcaatCCCCAATGAATTTTAT
GAgttttaaaacacccctgtctcacagcccctgtGCATCAATTTTTTTCC
CGCAGTGGGATAAACATTTCTATCGTAATTTCATAATTCCCATTCAgtga
ggatggttttggagaacaatatttttgattgaatttcgaAATGGGAGGtg
gaatcaaagtcaattttcctatggggctgaaattgttgGATATTTTTCTC
CGCTCGGAATGAAATTTTGATCCGATTTCAAGTTGGTAGCCCAACCGggt
caatgagacaggggtattgtAAATGATAGAATATCATACCCAGCTGGTAA
ATAAAACCCCCTCATTAATAGATAccatacccagctggcacacaacattg
gttcaacgttcatctaacgttacatGGACGTTAACgtcaacgttgaaaca
acgttgagtACCAGCTGGGTATGGGATCTATTAATGAAGTTGTTTTATAT
CATTATCTTGATATAATAATTTTCACTGAGTCACTGTGACAGGAGTGAGA
TATCAATTTTTTATCGtcgaaaaattctttgaaaaaagaaacaaaacaaa
ctatgcagcaaacataaaattataattcgaatcttttcaaacgttcaaac
aaaaattttctaatttaattGTTTATTAGCTAGTGCTCAAAATGAGCTTT
GTATAATTTGCCCCAGCAtaaattacaaatatttttaaaattttgatatt
ttgcttgaaatataATTTACAAACTTATCAACATAGATCAAAATTGGTAA
GTCACTTATCCTTAACTAAAATTATagacgttttttttttgtaaaatatt
tttcaagccttcgaatgttcttaataattcgtgttttaagcctaaaaatg
ttctttacttgtttttaatgttttggtCAACaaagcattatgttcttata
tagtttgttttaaaaaaaacatgtaagtcATGATAGAtttcgctttaagt
gtgcactccTTTTTGCTACCATATAGAAACCATGCCAGCGTGATCACTCT
CATATCATTGGGAACGGTTTCCACATAATCACAAGAAAGAATGAACACTT
AAAACGATTGAACTATAGTGCTGAGCATTGGATACCTTATCggctaaaac
ttaattttggcTTGATGACTAAAACTAGgcccgactaaaatttgggccga
ctcaAAACTTGGTGACTAAAactagggccgactaaaattagggccgactc
aaaacttggtgactaaaatttgggccgactaaaaatttagaaatagcCAA
AACTTAGTTATTAATCAGCCCTTAGTGACtgaattttgacgaggtgacta
aaattagggccgactaataattaaggccgactaagttttggccgataagg
tacaagtttttaataataacaaactatataagaacatatggccttgtttg
tcaaaatattaagaaattaCTAAGATCATTTCACGGCTCTATGGGCTTTA
AAACCAGAcaattcttaggaaaattgtacaaaattactcacaaaaaggta
aaatttcaaggacatttttaggcttaaaactcaaaagataagaacatccg
aaggcttcagaaatgttagatgtttaaaaaaaaatcgtgtCAACGTCACA
ATTGGACGTCCCGTATTCTCGTAAAACATGTATTGACTCTTTCCTTTTTA
GAGCAACCTTATCATACTTCTCATATCACCATGCACCTTTTATTGTTATG
TGCATGTCTGGTAATTGTGAATTGCAGATTCATTCCCCACAATGCTGTTC
CAAAGACCGGAATGAAACGCCAGCCGCTAAACCATATGCTACCAAACGGT
CAAAAAGTAGCCTCGAGTGAACCAAAGACAGAGGAAGAGAAGGTGAAAGA
GTTAAAAGATAAGCTAGTCCAAGAGAAATTAGCGGATCTAGCGAAAGCAC
AGGCGGAACAGAAAGAAGCTGCCACAGCTGTCACTAACGAAGATCAAAAA
AAGAAGCAGGAGAGTGATGAggaaaaatatgtcaaaatggAAATGGGTTA
CCACGTACCAGGTACCATCGTTCATCAAGGTACTTTTGAAGTTGACCCTA
ACACCATGCCCGGTTTTGGTGGAGATATGCCCGCTTATGGAGGTGGATAC
CCCTATGCTGGAGCATACCCTCAGCAAGGTATGGGATACAATACTGGATA
CCCTGGGTACGGTAGTTATGGTATGTCTCAATCATATGGTAATCATTTTG
GGTAAATTTTGTTAAGCTcacgtttttatataagaacatgcaaAAGTTTT
TGAGCATTCGTGAGAATTTGATTTCTAACCCTAAGGttatataaaatgtt
tttattttcactattttgtgagtatttttgtccatttgtCTAAGAAATCG
GGTCTTTTATTTAGAGCCTGCCAAGCCTTACTGGCTCTTAATGTTTTGGT
CCAAAGCCTTTCGATCTTATAtagttttgttcttataaaaattgcGTGAT
AGGCATACTTTATTTTACTAGATAGGCatattttattatatagttttgtt
cttataaaaattgcGTGATAGGCATACTTTATTTTACTAGATAggcatat
tttatttttgctaaTATAGTATTTTACTAACCACAATACGACCTTAGTTA
TTTTCTATTATCAATTTAAAACGTGATAGATCTAGTTCAATTTGCGACAC
TGTATTAAAGCGATAATGTGTTATGACTTATCTTAAGAACATTCCAAATA
GAAGAAATGCCCGGGAGGGTGGCACCTATGCAAAAtcgggtacggggacg
tgccgctggtcagggtcacttttttaggCGCTgaaagatatctgacaggg
tcccaattCTACTAATTTTTAAGTTGTTTATCTGACAGGGTAAGCTTTTG
GTTATATTtaggacaattttcagggtagaaattgggaagtttttcaattt
ttgctcaCTTTCATTTAAATGGgaagaaaaaagttcaaatttaccAAGGA
TTCATATCTGGCAGAGGCTATTCTTTTCAAACTTCAGCAGCACATCCCCG
TCGGCCATCTAGGACAGTCCCCCCTCTCGGAGAAAAGAAACTATTTGCAA
GTACTCACCAAACGGGAATAAAAAGATTTCGAAATACCATATATCCTGGC
AAAAGATAAATGCAATTAAACAAATTTGAAACAAGATAAACCCAGGTAGA
ACTTACTGTAATTCATAATTAGATGTCAGTTTTTATGTAAATATCATTTT
AGATAGAATTATAATCAAAttaattatattttgaaaatttggcaaaagta
TGAATGAATTTGATCAATCTACATGCGTAAAATGTACTATGAAGATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00071587-exon-scaffold_62-1491911889:314862..315871 | TCONS_00071587-exon-scaffold_62-1491911889:314862..315871 | Clytia hemisphaerica | exon |
| TCONS_00071587-exon-scaffold_62-1510915933:314862..315871 | TCONS_00071587-exon-scaffold_62-1510915933:314862..315871 | Clytia hemisphaerica | exon |
| TCONS_00071587-exon-scaffold_62-1575043694:314862..315871 | TCONS_00071587-exon-scaffold_62-1575043694:314862..315871 | Clytia hemisphaerica | exon |
| TCONS_00071587-exon-scaffold_62-1491911889:317230..317404 | TCONS_00071587-exon-scaffold_62-1491911889:317230..317404 | Clytia hemisphaerica | exon |
| TCONS_00071587-exon-scaffold_62-1510915933:317230..317404 | TCONS_00071587-exon-scaffold_62-1510915933:317230..317404 | Clytia hemisphaerica | exon |
| TCONS_00071587-exon-scaffold_62-1575043694:317230..317404 | TCONS_00071587-exon-scaffold_62-1575043694:317230..317404 | Clytia hemisphaerica | exon |
| TCONS_00071587-exon-scaffold_62-1491911889:317770..319957 | TCONS_00071587-exon-scaffold_62-1491911889:317770..319957 | Clytia hemisphaerica | exon |
| TCONS_00071587-exon-scaffold_62-1510915933:317770..319957 | TCONS_00071587-exon-scaffold_62-1510915933:317770..319957 | Clytia hemisphaerica | exon |
| TCONS_00071587-exon-scaffold_62-1575043694:317770..319957 | TCONS_00071587-exon-scaffold_62-1575043694:317770..319957 | Clytia hemisphaerica | exon |
| TCONS_00071587-exon-scaffold_62-1491911889:320863..322508 | TCONS_00071587-exon-scaffold_62-1491911889:320863..322508 | Clytia hemisphaerica | exon |
| TCONS_00071587-exon-scaffold_62-1510915933:320863..322508 | TCONS_00071587-exon-scaffold_62-1510915933:320863..322508 | Clytia hemisphaerica | exon |
| TCONS_00071587-exon-scaffold_62-1575043694:320863..322508 | TCONS_00071587-exon-scaffold_62-1575043694:320863..322508 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_62 | supercontig | scaffold_62:314862..322508 + |
Blast
BLAST of TCONS_00071587 vs. Swiss-Prot (Human)
Match: CP3A4 (Cytochrome P450 3A4 OS=Homo sapiens GN=CYP3A4 PE=1 SV=4) HSP 1 Score: 216.853 bits (551), Expect = 1.460e-59 Identity = 155/530 (29.25%), Postives = 253/530 (47.74%), Query Frame = 3
Query: 267 YMKHRLSYWKRRGIPEDKGHFPFGSKHAWDFVQGKMSFTQ-MTNFAYETHPG-EKVVGTYDMFGSPGLVIRDPDIAKLILVKD-FDNFMERKPIHYNMYDSNSKNNRYFPYMLTELRGQQWKNVRSSLTPVFTSGKLKNMIPLIHKVADNCETYL--DKNIGVEFEAKELLKGYALDIIISTGFGYENDTLNNPENIFKKHADVMIGKTFSWKLIATILLFMICPRLLRWLDWAMFDKNTVDFFAALIVKTIKERKESGQR-RNDLIDVCVDILEKERKENEKSVEDEEGAKRRNDEMEKIIIANSLIMFLAGFDTVSNASSLMMYFLAKHQDCQERLYQEVQEAIESTGSTNFDYATIMNMPYMEKFFQETLRMXSTIMNMPYMEKFFQETFRMYPLT-HLERCSKEEYKIPDTDIVIPKGIFVRYAATAVVKDEKYYPNPEVFDPENYSAEKKVDRHPFVTGAFGHGPRNCIAQRFATMEVKIVIARLLSKYKIVPCSKTVDELIPDPSSRSG--QPKGDIWVTVEKR 1829
Y H +K+ GIP G P F+ +S+ + F E H KV G YD P L I DPD+ K +LVK+ + F R+P + ++ ++ ++WK +RS L+P FTSGKLK M+P+I + D L + G K++ Y++D+I ST FG D+LNNP++ F ++ ++ F +I +F +L L+ +F + +F + + + R E Q+ R D + + +D + E+ K++ D E ++A S+I AG++T S+ S +MY LA H D Q++L +E+ + + +D T++ M Y++ ET R++P+ LER K++ +I + IPKG+ V + A+ +D KY+ PE F PE +S + K + P++ FG GPRNCI RFA M +K+ + R+L + PC +T IP S G QP+ + + VE R
Sbjct: 25 YGTHSHGLFKKLGIP---GPTPL------PFLGNILSYHKGFCMFDMECHKKYGKVWGFYDG-QQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGFMKSA---------ISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLE------------LVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYD----------------------TVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEI--NGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQ---IPLKLSLGGLLQPEKPVVLKVESR 496
The following BLAST results are available for this feature:
|
