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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071583 ID=TCONS_00071583|Name=TCONS_00071583|organism=Clytia hemisphaerica|type=transcript|length=1105bp
TTTGAAACGAGTTGAGTATGAGCTTTGTGGTGTCCTGTTGTAAcagattt
tttgtcaaagcGTTACAGAAGGAATTTTGTTAGAAATACATGACACACCA
ACCAATGGGATGCCAAATGACATGCTGAAATGGCTAGGGAGATTGTCGCT
GCTGGGCGTGGTGGGATGTTGGCCTAGGAGATTGTCGCTGGAGATGCTGG
GATgttggccaaggtgattgcCGCTGGATATGCTGGAatgttggccaagg
tgattgcCGCTGGGGTGGTGTTTCGAGAGAGTATACTTAGAAATAGCTGT
CTTGAAGACGGAACTGATGAACTACATGTTAGTTTGGTTTAACTAAAACT
TATCATACCCGACCACTTAACTTATTCTCAAATCAACAACACATGTTTAA
AAGGGTTAAAACTTCAATTTAGTTGGGTGGATTTTATTATGAGATTCGAC
AAGAGGATAACAATTCATGGCTTAGGCAGAGCTCAAATACTCTCCTTTAC
ATCTATTTTACAATATAATCTTGTACTGAGGCCCCCTTTTGGTTTGGATT
AAGAGGTTAAACTATACTTATAATATACTATTATAGTTATTTGATTATAT
ATTAGCTagtttttgatttatatttataaCTAACTATATTGACTGAGAGT
AGAGCATAGTCATGAACTTCTATCTAGAGGCTAGAATGAAGAGGCAGTTA
ACATAAAGGGTCAACAACAagtaatcaaaattttataCAGACAAGTAGTG
AATTGGGGTGTATCTAGAGTATTTGTTGATCAActagatttttcttcttc
agaagAGGCTGGTTTAAATGTACAGAAGGCGAGTCAAGGCAGAAGATTGA
CAAAAGCCAATACTACTCAAGTAGAATAATATATGGAAAACTAGgaaatc
aatgtttttgttttaaagggtGACTACTTAGTTGAATAAAGCTTGGGCAG
AAGATGAGCaaacaattttctgaaaatattcCAGACCAAAGTATACACAC
AACATCGACCAACATTAAcggggctcccccaggggctggcgtgacgcgtg
aatgacccttttttctgtcgtgaatacgtgaattggactttttcaacgcg
tgaat Run BLAST on NCBI transcript from alignment at scaffold_62:283901..285077+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071583 ID=TCONS_00071583|Name=TCONS_00071583|organism=Clytia hemisphaerica|type=transcript|length=1177bp|location=Sequence derived from alignment at scaffold_62:283901..285077+ (Clytia hemisphaerica)
TTTGAAACGAGTTGAGTATGAGCTTTGTGGTGTCCTGTTGTAAcagattt
tttgtcaaagcGTTACAGAAGGAATTTTGTTAGAAATACATGACACACCA
ACCAATGGGATGCCAAATGACATGCTGAAATGGCTAGGGAGATTGTCGCT
GCTGGGCGTGGTGGGATGTTGGCCTAGGAGATTGTCGCTGGAGATGCTGG
GATGTTAGCCAAGGTGATTGCCGCTGGATATGCTGGGATGTTGGCCAAAG
TGATTGCCGCTGGATATGCTgggatgttggccaaggtgattgcCGCTGGA
TATGCTGGAatgttggccaaggtgattgcCGCTGGGGTGGTGTTTCGAGA
GAGTATACTTAGAAATAGCTGTCTTGAAGACGGAACTGATGAACTACATG
TTAGTTTGGTTTAACTAAAACTTATCATACCCGACCACTTAACTTATTCT
CAAATCAACAACACATGTTTAAAAGGGTTAAAACTTCAATTTAGTTGGGT
GGATTTTATTATGAGATTCGACAAGAGGATAACAATTCATGGCTTAGGCA
GAGCTCAAATACTCTCCTTTACATCTATTTTACAATATAATCTTGTACTG
AGGCCCCCTTTTGGTTTGGATTAAGAGGTTAAACTATACTTATAATATAC
TATTATAGTTATTTGATTATATATTAGCTagtttttgatttatatttata
aCTAACTATATTGACTGAGAGTAGAGCATAGTCATGAACTTCTATCTAGA
GGCTAGAATGAAGAGGCAGTTAACATAAAGGGTCAACAACAagtaatcaa
aattttataCAGACAAGTAGTGAATTGGGGTGTATCTAGAGTATTTGTTG
ATCAActagatttttcttcttcagaagAGGCTGGTTTAAATGTACAGAAG
GCGAGTCAAGGCAGAAGATTGACAAAAGCCAATACTACTCAAGTAGAATA
ATATATGGAAAACTAGgaaatcaatgtttttgttttaaagggtGACTACT
TAGTTGAATAAAGCTTGGGCAGAAGATGAGCaaacaattttctgaaaata
ttcCAGACCAAAGTATACACACAACATCGACCAACATTAAcggggctccc
ccaggggctggcgtgacgcgtgaatgacccttttttctgtcgtgaatacg
tgaattggactttttcaacgcgtgaat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00071583-exon-scaffold_62-1491911889:283901..284103 | TCONS_00071583-exon-scaffold_62-1491911889:283901..284103 | Clytia hemisphaerica | exon |
| TCONS_00071583-exon-scaffold_62-1510915933:283901..284103 | TCONS_00071583-exon-scaffold_62-1510915933:283901..284103 | Clytia hemisphaerica | exon |
| TCONS_00071583-exon-scaffold_62-1575043694:283901..284103 | TCONS_00071583-exon-scaffold_62-1575043694:283901..284103 | Clytia hemisphaerica | exon |
| TCONS_00071583-exon-scaffold_62-1491911889:284176..285077 | TCONS_00071583-exon-scaffold_62-1491911889:284176..285077 | Clytia hemisphaerica | exon |
| TCONS_00071583-exon-scaffold_62-1510915933:284176..285077 | TCONS_00071583-exon-scaffold_62-1510915933:284176..285077 | Clytia hemisphaerica | exon |
| TCONS_00071583-exon-scaffold_62-1575043694:284176..285077 | TCONS_00071583-exon-scaffold_62-1575043694:284176..285077 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_62 | supercontig | scaffold_62:283901..285077 + |
Blast
The following BLAST results are available for this feature:
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