TCONS_00071575 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071575
Unique NameTCONS_00071575
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length138

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071575 ID=TCONS_00071575|Name=TCONS_00071575|organism=Clytia hemisphaerica|type=transcript|length=138bp
GTTGGATTGGTCTTGCTCGACTCTGGATTGTCATTGTTTTGTTCTATGGT
TAATGGAGTGATAAAGaacaaaCCTTGATTGGAATCGTTTGCATCTCCAC
CATCATTTTCCTCCATGTTCTCTTTGTCTGCTTCTAAT
Run BLAST on NCBI

transcript from alignment at scaffold_62:120185..120854+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071575 ID=TCONS_00071575|Name=TCONS_00071575|organism=Clytia hemisphaerica|type=transcript|length=670bp|location=Sequence derived from alignment at scaffold_62:120185..120854+ (Clytia hemisphaerica)
GTTGGATTGGTCTTGCTCGACTCTGGATTGTCATTGTTTTGTTCTATGGT TAATGGAGTGATAAAGGTATCTAACAAAACTTATCTTTGATCAAATATAC TTGTTACAACGTCAAAGGGACGACGTTTAAAGGAAAAATCTGTTTTTGAA CTGGTTTTTGGACAAGAAATTtgtctattttcaacatttgtgTGTTTATT GCAGGAAATTGATATTCTGCCGGAAATTGATATTCGGAGCCCAGAAAAGG AGTAGGTGGGGGGAGAATACCAAATGGGGTTTTTCGGCCCCAGATGGAGG GACCTAAAAACCTGGAAGATACCATGGTCTAGACTTATACTGAACTAGGA TTTACCTTGTTGGcgctttttctttgtttttggtcTTCTCACTTCATCTT TAAAAGGAAAATATATAGCtacattttaaaggcttttaaaTAAGTAATAT TGGGTGCAACGAGTTAGATTCAAAAAGGGAAAGGCTGGAAAAGGACTTTT TATCCAGTTTAATAAACAACTCaacttttgtttatgttttattCTACACT TAACAAGgctaatttcatttttaaatttacatggtttattttttttagaa caaaCCTTGATTGGAATCGTTTGCATCTCCACCATCATTTTCCTCCATGT TCTCTTTGTCTGCTTCTAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044472XLOC_044472Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071575-exon-scaffold_62-1491911889:120185..120250TCONS_00071575-exon-scaffold_62-1491911889:120185..120250Clytia hemisphaericaexon
TCONS_00071575-exon-scaffold_62-1510915933:120185..120250TCONS_00071575-exon-scaffold_62-1510915933:120185..120250Clytia hemisphaericaexon
TCONS_00071575-exon-scaffold_62-1575043694:120185..120250TCONS_00071575-exon-scaffold_62-1575043694:120185..120250Clytia hemisphaericaexon
TCONS_00071575-exon-scaffold_62-1491911889:120783..120854TCONS_00071575-exon-scaffold_62-1491911889:120783..120854Clytia hemisphaericaexon
TCONS_00071575-exon-scaffold_62-1510915933:120783..120854TCONS_00071575-exon-scaffold_62-1510915933:120783..120854Clytia hemisphaericaexon
TCONS_00071575-exon-scaffold_62-1575043694:120783..120854TCONS_00071575-exon-scaffold_62-1575043694:120783..120854Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_62supercontigscaffold_62:120185..120854 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00071575 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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