|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071550 ID=TCONS_00071550|Name=TCONS_00071550|organism=Clytia hemisphaerica|type=transcript|length=901bp
GATATTTTATAACGTAGCCTACGATATATCCGGCATACATGTCTTGGTTT
CCAGACTGAAAAACGAGTCCCTGAGATCGAGTTCTTCCGTTTTTAAataa
agtatgattgataagtTAACAACCTCTAAGTTGAGATTATAAATTCGCAA
TGTTTACCTTAGATATGATAATCCATCAAACTACAACAATTCATTCATAT
CCTTCTCATATCGCAGTTATTCCGTCCGTGagatttgtttttataatttt
atagtttttaatattttgatttggtatgtgtttttttatttgttaaattt
tttgttgtttatttttgttgtgCTTTATTATTTTATTGATACGAAAAAAC
TAAAGGTAATATTTATACTCTATTTATATGTGAGGtgtaatttttgcaaa
aaatgtatTTGTTATGTTTGACAACTAGAGGTGTAGGGATTTTTCGTATT
TATTTTACGACAAAAAATTTGTCTATTTCTTCTTTTGCTTATATTACGAA
AAGGATGAATTTGATTTTAGACTGACTTTTAGCTGATGATAGAGAGCGCA
ATAAGCTAGATAGATAGTAGcttttttctccaatattttgtGGTACATAT
TTTGTTGTACAcgcaattatattttttgacatattttttgtttatctttt
ttatttcctttatatttttgtttgttgCTTTTACTactataaaaaaatct
tttgtaaaattgttttaaacatttgaaaattttgtaaataaaactTGCTG
TATATTCAAATCCACTTTTCGCTATCTTTCtttctgatatttttctttcg
tttgaTGTATGCAAATCAAAGACAGGTAGCGTCAGTTTGTATCTTTTGAA
CTGACAAAGAAGATGTAATTCAGCAGTACAAGAATTGCAACAGCCAATGT
G Run BLAST on NCBI transcript from alignment at scaffold_60:1513470..1514370 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071550 ID=TCONS_00071550|Name=TCONS_00071550|organism=Clytia hemisphaerica|type=transcript|length=901bp|location=Sequence derived from alignment at scaffold_60:1513470..1514370 (Clytia hemisphaerica)
CACATTGGCTGTTGCAATTCTTGTACTGCTGAATTACATCTTCTTTGTCA
GTTCAAAAGATACAAACTGACGCTACCTGTCTTTGATTTGCATACAtcaa
acgaaagaaaaatatcagaaaGAAAGATAGCGAAAAGTGGATTTGAATAT
ACAGCAagttttatttacaaaattttcaaatgtttaaaacaattttacaa
aagatttttttatagtAGTAAAAGcaacaaacaaaaatataaaggaaata
aaaaagataaacaaaaaatatgtcaaaaaatataattgcgTGTACAACAA
AATATGTACCacaaaatattggagaaaaaagCTACTATCTATCTAGCTTA
TTGCGCTCTCTATCATCAGCTAAAAGTCAGTCTAAAATCAAATTCATCCT
TTTCGTAATATAAGCAAAAGAAGAAATAGACAAATTTTTTGTCGTAAAAT
AAATACGAAAAATCCCTACACCTCTAGTTGTCAAACATAACAAatacatt
ttttgcaaaaattacaCCTCACATATAAATAGAGTATAAATATTACCTTT
AGTTTTTTCGTATCAATAAAATAATAAAGcacaacaaaaataaacaacaa
aaaatttaacaaataaaaaaacacataccaaatcaaaatattaaaaacta
taaaattataaaaacaaatctCACGGACGGAATAACTGCGATATGAGAAG
GATATGAATGAATTGTTGTAGTTTGATGGATTATCATATCTAAGGTAAAC
ATTGCGAATTTATAATCTCAACTTAGAGGTTGTTAacttatcaatcatac
tttatTTAAAAACGGAAGAACTCGATCTCAGGGACTCGTTTTTCAGTCTG
GAAACCAAGACATGTATGCCGGATATATCGTAGGCTACGTTATAAAATAT
C
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00071550-exon-scaffold_60-1491911889:1513470..1514370 | TCONS_00071550-exon-scaffold_60-1491911889:1513470..1514370 | Clytia hemisphaerica | exon |
| TCONS_00071550-exon-scaffold_60-1510915933:1513470..1514370 | TCONS_00071550-exon-scaffold_60-1510915933:1513470..1514370 | Clytia hemisphaerica | exon |
| TCONS_00071550-exon-scaffold_60-1575043694:1513470..1514370 | TCONS_00071550-exon-scaffold_60-1575043694:1513470..1514370 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_60 | supercontig | scaffold_60:1513470..1514370 . |
Blast
The following BLAST results are available for this feature:
|
