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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071543 ID=TCONS_00071543|Name=TCONS_00071543|organism=Clytia hemisphaerica|type=transcript|length=808bp cccccggctattaggcacccgagagtataATGAAATACTTCGTCTTAGAA CTAAATGGCAAGTTAACTATCTAATGGATGAAATTTCAGGGGCACCGGGG ACTTTACTGGACTAGTTTTTTCCCGGTAGATTTTGTTTCACGGCGTCTAG AGCTTAGTATTGTGTATTCTTACGGTAAAAGATGCCCAATTTTTAGCCTG TTAAAGTCTTATAagtcaaaaaacaaaatttccaatCCAATTCAAGATGT ATTTTGCCCCTGTAAGccttttttttttgtgaaaattttaatttttacgt cttgattcgcgaaactTTGAGTCTGGAGTATGGTCAGAAAACAATGTTAT TATTTAGTGTTAACATAAATATTTGCTGCAATTGAAAGATTGAagacaca aaatcaaaaacagtcTAAGCGGACTGTTGCTGTTCGAGAATTATGATTTT atcagctttttagcgattgcTTGTTTTGAGCACTCTTGAAGAGAAAAATC CACGTGATTTTATCCCCATGTTACTTGGTATACAACTCACATCTAATTAC TCACATTATTCCTACCTAGCATACCGtagcgaatctaaaaatagacattg atttttctgtttgaccgaaattcaatcccgtcAACCTTTGCGTCAATTAt gcttgcacgcaaattacactcaattacaaagtAGTAAatttcacgacttt tgaattaaaacaaacaagctagatgctgaatggacctacctgatgatgaa agttagatagcaatgcgaggagaaaaaaatcagtcagaaaatatatcgtt tagcgaaa Run BLAST on NCBI transcript from alignment at scaffold_60:1118543..1119350 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071543 ID=TCONS_00071543|Name=TCONS_00071543|organism=Clytia hemisphaerica|type=transcript|length=808bp|location=Sequence derived from alignment at scaffold_60:1118543..1119350 (Clytia hemisphaerica) tttcgctaaacgatatattttctgactgatttttttctcctcgcattgct
atctaactttcatcatcaggtaggtccattcagcatctagcttgtttgtt
ttaattcaaaagtcgtgaaatTTACTactttgtaattgagtgtaatttgc
gtgcaagcaTAATTGACGCAAAGGTTgacgggattgaatttcggtcaaac
agaaaaatcaatgtctatttttagattcgctaCGGTATGCTAGGTAGGAA
TAATGTGAGTAATTAGATGTGAGTTGTATACCAAGTAACATGGGGATAAA
ATCACGTGGATTTTTCTCTTCAAGAGTGCTCAAAACAAgcaatcgctaaa
aagctgatAAAATCATAATTCTCGAACAGCAACAGTCCGCTTAgactgtt
tttgattttgtgtctTCAATCTTTCAATTGCAGCAAATATTTATGTTAAC
ACTAAATAATAACATTGTTTTCTGACCATACTCCAGACTCAAagtttcgc
gaatcaagacgtaaaaattaaaattttcacaaaaaaaaaaggCTTACAGG
GGCAAAATACATCTTGAATTGGattggaaattttgttttttgactTATAA
GACTTTAACAGGCTAAAAATTGGGCATCTTTTACCGTAAGAATACACAAT
ACTAAGCTCTAGACGCCGTGAAACAAAATCTACCGGGAAAAAACTAGTCC
AGTAAAGTCCCCGGTGCCCCTGAAATTTCATCCATTAGATAGTTAACTTG
CCATTTAGTTCTAAGACGAAGTATTTCATtatactctcgggtgcctaata
gccggggg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00071543-exon-scaffold_60-1491911889:1118543..1119350 | TCONS_00071543-exon-scaffold_60-1491911889:1118543..1119350 | Clytia hemisphaerica | exon |
TCONS_00071543-exon-scaffold_60-1510915933:1118543..1119350 | TCONS_00071543-exon-scaffold_60-1510915933:1118543..1119350 | Clytia hemisphaerica | exon |
TCONS_00071543-exon-scaffold_60-1575043694:1118543..1119350 | TCONS_00071543-exon-scaffold_60-1575043694:1118543..1119350 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_60 | supercontig | scaffold_60:1118543..1119350 . |
Blast
The following BLAST results are available for this feature:
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