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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071512 ID=TCONS_00071512|Name=TCONS_00071512|organism=Clytia hemisphaerica|type=transcript|length=1158bp
aggacgtcctgttgaataattatgtagtccagccataaaaacaatgatag
agccatgcataattactgtatcatgcatattgtaataattatgcatcgtt
tatcattgtttttctgctggactacataattattcaacagggtggcctct
ttgaaaaaaggtctattaaaaaatacacaatttctcttttgcaccgagta
gcctttttaaatcgaaatatgaaaaaaatctgtagtggaacacgtGCGAA
TGTCTGGAAtgaagaagaccatattagtgGCCAAACGAttgagcgtttga
cgtcactcgcgctgCAAGTAACACACTCGTTaattgttaatcccatcggg
tgaTGGGCagttaggcggcgggcgttctctaattaatctcattttgaatg
aaaacaaaaaagttaaaaagggtgcgtcctgaatctctttgacaacaaat
ttgttttgatacttccacaccaagtttatcaaccacactttctgtcacga
taactttcactgatcaaattccctctgaaaaaactttgtaGTAACTATGT
AGTAACCTACATAGAGACAGTTGTTCAGCCGGGCATACACTCCAATAATT
GCAATTGACAACTGAACAGCCGACAGTCGTATGTTTGTTCAAGAAATTTT
AAGTCAATACTCGCAATGGTTACAAAAAATTACTTGTCTTGGAATGGTGA
ATCATCAATCAAATCTTGCTTTAGCGTTTATGTGTAAATGTAAATGTTCT
CTTGCTTCACTTCATCTGCTACTGTAATTGTAGCTAAAGAAATTCATGGT
ATAACTTGATCTGGCAATCAATACATTGGTTAGGTTGCCATATGCAGTGA
GTGATCGTGGTTGGGACATGCTATCAACTGTTATCATAGATTTCGAGAAA
TTGAaacaataataaacttcttcttatctatcttatttttcttttcaaca
cAAACACATCCATCTTCCAAATCTTTAACCTCAAACAAAAGCGATTCTAG
TGAAAGGAGGTTTGTTTTCAACAACATCACGAGTGTGGTAGTTTGAATGG
AATAATATCAATGAAGAAccataaatttcaatttcaattttgaacaaTCA
TTATTGTAGTTGTAGATTTAAAATCTACATCAAGAATTATCTGCTGCTTG
CATTTTTT Run BLAST on NCBI transcript from alignment at scaffold_60:681941..683098 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071512 ID=TCONS_00071512|Name=TCONS_00071512|organism=Clytia hemisphaerica|type=transcript|length=1158bp|location=Sequence derived from alignment at scaffold_60:681941..683098 (Clytia hemisphaerica)
AAAAAATGCAAGCAGCAGATAATTCTTGATGTAGATTTTAAATCTACAAC
TACAATAATGAttgttcaaaattgaaattgaaatttatggTTCTTCATTG
ATATTATTCCATTCAAACTACCACACTCGTGATGTTGTTGAAAACAAACC
TCCTTTCACTAGAATCGCTTTTGTTTGAGGTTAAAGATTTGGAAGATGGA
TGTGTTTgtgttgaaaagaaaaataagatagataagaagaagtttattat
tgttTCAATTTCTCGAAATCTATGATAACAGTTGATAGCATGTCCCAACC
ACGATCACTCACTGCATATGGCAACCTAACCAATGTATTGATTGCCAGAT
CAAGTTATACCATGAATTTCTTTAGCTACAATTACAGTAGCAGATGAAGT
GAAGCAAGAGAACATTTACATTTACACATAAACGCTAAAGCAAGATTTGA
TTGATGATTCACCATTCCAAGACAAGTAATTTTTTGTAACCATTGCGAGT
ATTGACTTAAAATTTCTTGAACAAACATACGACTGTCGGCTGTTCAGTTG
TCAATTGCAATTATTGGAGTGTATGCCCGGCTGAACAACTGTCTCTATGT
AGGTTACTACATAGTTACtacaaagttttttcagagggaatttgatcagt
gaaagttatcgtgacagaaagtgtggttgataaacttggtgtggaagtat
caaaacaaatttgttgtcaaagagattcaggacgcaccctttttaacttt
tttgttttcattcaaaatgagattaattagagaacgcccgccgcctaact
GCCCAtcacccgatgggattaacaattAACGAGTGTGTTACTTGcagcgc
gagtgacgtcaaacgctcaaTCGTTTGGCcactaatatggtcttcttcaT
TCCAGACATTCGCacgtgttccactacagatttttttcatatttcgattt
aaaaaggctactcggtgcaaaagagaaattgtgtattttttaatagacct
tttttcaaagaggccaccctgttgaataattatgtagtccagcagaaaaa
caatgataaacgatgcataattattacaatatgcatgatacagtaattat
gcatggctctatcattgtttttatggctggactacataattattcaacag
gacgtcct
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00071512-exon-scaffold_60-1491911889:681941..683098 | TCONS_00071512-exon-scaffold_60-1491911889:681941..683098 | Clytia hemisphaerica | exon |
| TCONS_00071512-exon-scaffold_60-1510915933:681941..683098 | TCONS_00071512-exon-scaffold_60-1510915933:681941..683098 | Clytia hemisphaerica | exon |
| TCONS_00071512-exon-scaffold_60-1575043694:681941..683098 | TCONS_00071512-exon-scaffold_60-1575043694:681941..683098 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_60 | supercontig | scaffold_60:681941..683098 . |
Blast
The following BLAST results are available for this feature:
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