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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071498 ID=TCONS_00071498|Name=TCONS_00071498|organism=Clytia hemisphaerica|type=transcript|length=947bp
ccccggtggagctttttccttcagtgtggatgaaaatttttatctaatCG
TAGTGTCCCGATTGGGATAGAAAATATATATTCCAGCTCTAAGTTTACAG
AGAGAATGGTTGCAGTGCATTCTTTCCACCACACTGAGGGTAAAGTCATT
CGGTTTAAAAGTGGTTTAAAATTTCAGGTTAGTTTTTCCACCGGACAGAC
GATTTTTGGCTAAGTTTTCCAGTGTGGCGAGGGGCTCCACCGGATCTCTG
ACACGAGGGTTTCCAGCATATTCTCGCCCTCGGCAATGGATGTGTGTCAT
TATGATATTACGACGttggaaaatgtggaaaatacacGTCTCACGTGGAT
ATGATGATCGCAATTGTGTTcccataaaaatgaaaactgaaatgaaaaag
aaaaagaaaaacagcgAGAGAAGAAGTAATTCATCCAATCTTGACCACTG
GAGAATTAAAAATAAGTATGGAGTGGCAGGATCGGGATTATTAAACACCG
TTATCTCACAATGCCCGTATTCTAAGTTTCGTATGTTCCGCATTTGAAAA
TCGCAAGTATGACTGCACGGATAAACTCCTTCGCCACAGCCTTACGCCAG
CATAATAAGGAACAATTGTTattttccaaatcaaaatataaagacAATAA
AGAAGGATTACCTGGTATATCTTATTGAATTTGATTAATCTTCTTAATAT
TGattctaaacaaaaagaatgatgttaattgattgtaaaaccactgcaaa
atcttaaattttctaattttccaccccgtgcaaatgcacagagttccaaa
aacCCAGTGTATTTGCACCGGGTTTTCGCGCTACTTTCGATTTCGACCCG
TTGCAAATGCAACATAGCCGaccccgtgcaaatgcaaggatttccgtGAC
TGTCATTTAATTTATCCAATTTATCACACTTTTATCACCCAGAATCT Run BLAST on NCBI transcript from alignment at scaffold_60:180724..181670 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071498 ID=TCONS_00071498|Name=TCONS_00071498|organism=Clytia hemisphaerica|type=transcript|length=947bp|location=Sequence derived from alignment at scaffold_60:180724..181670 (Clytia hemisphaerica)
AGATTCTGGGTGATAAAAGTGTGATAAATTGGATAAATTAAATGACAGTC
acggaaatccttgcatttgcacggggtCGGCTATGTTGCATTTGCAACGG
GTCGAAATCGAAAGTAGCGCGAAAACCCGGTGCAAATACACTGGgttttt
ggaactctgtgcatttgcacggggtggaaaattagaaaatttaagatttt
gcagtggttttacaatcaattaacatcattctttttgtttagaatCAATA
TTAAGAAGATTAATCAAATTCAATAAGATATACCAGGTAATCCTTCTTTA
TTgtctttatattttgatttggaaaatAACAATTGTTCCTTATTATGCTG
GCGTAAGGCTGTGGCGAAGGAGTTTATCCGTGCAGTCATACTTGCGATTT
TCAAATGCGGAACATACGAAACTTAGAATACGGGCATTGTGAGATAACGG
TGTTTAATAATCCCGATCCTGCCACTCCATACTTATTTTTAATTCTCCAG
TGGTCAAGATTGGATGAATTACTTCTTCTCTcgctgtttttctttttctt
tttcatttcagttttcatttttatgggAACACAATTGCGATCATCATATC
CACGTGAGACgtgtattttccacattttccaaCGTCGTAATATCATAATG
ACACACATCCATTGCCGAGGGCGAGAATATGCTGGAAACCCTCGTGTCAG
AGATCCGGTGGAGCCCCTCGCCACACTGGAAAACTTAGCCAAAAATCGTC
TGTCCGGTGGAAAAACTAACCTGAAATTTTAAACCACTTTTAAACCGAAT
GACTTTACCCTCAGTGTGGTGGAAAGAATGCACTGCAACCATTCTCTCTG
TAAACTTAGAGCTGGAATATATATTTTCTATCCCAATCGGGACACTACGa
ttagataaaaattttcatccacactgaaggaaaaagctccaccgggg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00071498-exon-scaffold_60-1491911889:180724..181670 | TCONS_00071498-exon-scaffold_60-1491911889:180724..181670 | Clytia hemisphaerica | exon |
| TCONS_00071498-exon-scaffold_60-1510915933:180724..181670 | TCONS_00071498-exon-scaffold_60-1510915933:180724..181670 | Clytia hemisphaerica | exon |
| TCONS_00071498-exon-scaffold_60-1575043694:180724..181670 | TCONS_00071498-exon-scaffold_60-1575043694:180724..181670 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_60 | supercontig | scaffold_60:180724..181670 . |
Blast
The following BLAST results are available for this feature:
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