TCONS_00071480 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071480
Unique NameTCONS_00071480
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2512

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071480 ID=TCONS_00071480|Name=TCONS_00071480|organism=Clytia hemisphaerica|type=transcript|length=2512bp
GGAGGCTGTTACGAACCTCTATTGAAGTGCATTATGGGAAAATAGTCCAT
CAAATTTAAGAAATGCATAACTCTCCTTCTTTCAGTCAgttaaatgaaaa
tgaaattgggCTTGCCAAATATGGTTATTATAATCTCCTGCACCTTGAAG
CTGACAAAATAGATAAATGTGGCATGTGGcatatcatttttcatttggTG
ACACTTGTgtattgaaaaacattttctgagGGTGTCAACCTCGTTGGAAA
CATGGGGATGTTGTCGCTCCTTTGTTTCACCTCCTTGATTATTTACGGTC
ATTCAGCCACTACAGAACAAAAAGTCAATTATCTTACCAACCATGTCAAA
GCTTTGACACGTCAAGTTATGCttcaacaatttttcgatgagaGTCGTGT
CAGAACTGAAGGTCAGAGTGGTTTGAATTTGATTCGCCAGCGCCAACATG
GACTTAAAAACTACTTTAGTGAATCACATAGTGGTTGGTCCTCAGCTGCG
ATCCATGACCACGCCAACAATGACCGTACCGTTGGAATGGGTGAATTTGC
AGCTGTCCTTAACGGAGTTGAATTCAAAACAAGACATAACGACTACCGTC
TATACATGCCTCATCGAACATCAAAGAATCTCAATGCTTGGGAACCAGTA
CCTTTCCCAGACGTACCGCCAGAAGTTTTGAATATCGCAGATGTTGATGA
ACAAGTTGCCGAGATGAGAGAATGGTTCAAAGCTTTCCAAAAACAAGATT
ACTCTGTTCGTGATTATCGGAAATATTTCAAACCTGTTTTATGTTATTTG
GAAGGTGGCTGGAGCCAATCTGGAAAAGACATTGATGAACCTTTCGAATC
TGACCGTCATTTCGTCGACGCAGCATCATGGCAAGAGCTGCATGAAAAGA
TGAGATATGTTGGATATTCTGGTGGAAAAAGCCGAAATGAAAACTTATCC
TTCCTACCaacaaaaatcattaatttGATTAATGATACTGTTCCAAGTTT
TGCTCAATGGAATTATCGCATCATGTGCCATCCTTTGGGGAAAGATATTC
CTTTAAAACGGTTGAGAATCAAAGAGGATCTGGCAGCTCGCATGATGGCC
AATCGTGATATCCAATCCTCTTCAACTTCAAGAGGAGCACGTTTTGAACT
GAACcataaaaatgaagatcgaTTTTATGAACGTCCAACCAATTGGAGAA
ATTTCCTTGATGAGTTGATGGGAGAAATTCCTGGCAAAGACAACTACCAA
GCTAAACTTGTTGACGAAGGATTGGAATATCCAGCGCAAAATCTTGATGG
AACCACATTGAATGCTGGTTACTATCATAGATGGTTCACTGTTGGTAAAG
ATGCTATGGGATCAGCAAATCAACATCGAGGATTCAGTGATCCTTACCTA
TTCACCGCCATGAACACACAAGCCAAATCAGCTGGAGTTGACTACAAAAA
ATGTATGGGAAACCCAAAAAAATGCCACATGTTGAAACAGCGATGGTCGT
ATGCAATTCCCTTGGAAATCATCTATTTGACACCCCTATATAAATGGAAT
CCTTTCAAGTTAAACCACTTTGGAAANTGGAAATCATCTATTTGACACCC
CTATATAAATGGAATCCTTTCAAGTTAAACCACTTCGGAAATGACCACTG
GACTAACCGTAAAATTTTGACAGAGGGTGGCAAACGAAATGGTGATTGCA
AAGGAGGAGCTGCCAAGGCTTTCAATGGTATAAACAGTAGATTCTTCTAT
CAAACACCTGCAGCATTTTACTCCGGAGCTTCTGTTAATTCTGGTGGAGC
AGCTGATACAGCACGTGGTGTCACTTGTGTTCTTGATCAGGATGGGAAAG
TACAACAAGTCAGAGCCGCTGGAACACACATTTTCCTACCACAAATCAAA
GATGTTGGTATTCTGAGAACcagatttccaatttttccagttCACGGTGA
AGGATCGTCTGTATGGAAAGAATTGAACGCTTTGAGAGAAGTCACCATGA
ATGAAGAAATCTGGAAACGTATGTATTGGAAAAATGCTGACCTCGATTCA
TCCAAATACAAGGAATTGGAGCTGGAAATGGGTTACTCTGAATCTACCAA
AACCAGTCGTCACACTCATTACGTTACTTTTACACCAGAAGAGGTTTTGC
AGCTCAGAGGCTACGTCCCATTGACAAAGATGACAACACAGGCTAATGGT
CATTCACATCAAGTTAGAATTCGATATCTTTGGTGGATAAAGAAATACGA
TGTGCAATATTGTGATGGATTTCCAAACACAGGTTCAAAGAGATGCTGGG
ATACACACGACCGGTTTATGGCTGTTGTTACACAATAAAAAGTTGTGTAT
CTTTTCTCTATTATATCTATTTTTCATTCTACgatatttttatattatca
ATAATAAAGTAGATAATAGGATAATAgcatataaaaatatattgtgcaga
acacattcttataaaaaaagcgtgttggGTACAATTCTAAATCCCTATTC
ACACAATCACCA
Run BLAST on NCBI

protein sequence of TCONS_00071480-protein

>TCONS_00071480-protein ID=TCONS_00071480-protein|Name=TCONS_00071480-protein|organism=Clytia hemisphaerica|type=polypeptide|length=447bp
MGMLSLLCFTSLIIYGHSATTEQKVNYLTNHVKALTRQVMLQQFFDESRV
RTEGQSGLNLIRQRQHGLKNYFSESHSGWSSAAIHDHANNDRTVGMGEFA
AVLNGVEFKTRHNDYRLYMPHRTSKNLNAWEPVPFPDVPPEVLNIADVDE
QVAEMREWFKAFQKQDYSVRDYRKYFKPVLCYLEGGWSQSGKDIDEPFES
DRHFVDAASWQELHEKMRYVGYSGGKSRNENLSFLPTKIINLINDTVPSF
AQWNYRIMCHPLGKDIPLKRLRIKEDLAARMMANRDIQSSSTSRGARFEL
NHKNEDRFYERPTNWRNFLDELMGEIPGKDNYQAKLVDEGLEYPAQNLDG
TTLNAGYYHRWFTVGKDAMGSANQHRGFSDPYLFTAMNTQAKSAGVDYKK
CMGNPKKCHMLKQRWSYAIPLEIIYLTPLYKWNPFKLNHFGXWKSSI
Run BLAST on NCBI

transcript from alignment at scaffold_60:1653257..1656523-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071480 ID=TCONS_00071480|Name=TCONS_00071480|organism=Clytia hemisphaerica|type=transcript|length=3267bp|location=Sequence derived from alignment at scaffold_60:1653257..1656523- (Clytia hemisphaerica)
GGAGGCTGTTACGAACCTCTATTGAAGTGCATTATGGGAAAATAGTCCAT
CAAATTTAAGAAATGCATAACTCTCCTTCTTTCAGTCAGTTAAATGAAAA
TGAAATTGGGCTTGCCAAATATGGTTATTATAATCTCCTGCACCTTGAAG
CTGACAAAATAGATAAATGTGGCATGTGGCATATCATTTTTCATTTGGTG
ACACTTGTGTATTGAAAAACATTTTCTGAGGGTGTCAACCTCGTTGGAAA
CATGGGGGTGAGTAAAAATTAATTTTTTTATTCAATATCTTAGTCTTAGA
GATCCGTTTCCCAGCTAGCTCTCTTGTACTACCCTGGAGAAATTTTAACT
TTTTTTAAATTTAACTTTCTTTCAAAACTCTTTTTATCTACTGAAGGGGG
AAACACATGGGTTTGACAATTGAACATCGAAATTGATCAAATTATATCCA
ATAAGGGTCGTTAAATGCAAGAAATGCTCCATATTTCCCTTCATTTTAGT
CTCGCTAAGGATCCGAGGGTCGGAAGCCGGGTGGCAACCCCGTCATCCTG
TAAACCTAGTCCCCCATCTCCTGAGTGAGTAGGAATATCTTAAAGAAATT
TCTTTTGTCTTCAGATGTTGTCGCTCCTTTGTTTCACCTCCTTGATTATT
TACGGTCATTCAGCCACTACAGAACAAAAAGTCAATTATCTTACCAACCA
TGTCAAAGCTTTGACACGTCAAGTTATGCTTCAACAATTTTTCGATGAGA
GTCGTGTCAGAACTGAAGGTCAGAGTGGTTTGAATTTGATTCGCCAGCGC
CAACATGGACTTAAAAACTACTTTAGTGAATCACATAGTGGTTGGTCCTC
AGCTGCGATCCATGACCACGCCAACAATGACCGTACCGTTGGAATGGGTG
AATTTGCAGCTGTCCTTAACGGAGTTGAATTCAAAACAAGACATAACGAC
TACCGTCTATACATGCCTCATCGAACATCAAAGAATCTCAATGCTTGGGA
ACCAGTACCTTTCCCAGACGTACCGCCAGAAGTTTTGAATATCGCAGATG
TTGATGAACAAGTTGCCGAGATGAGAGAATGGTTCAAAGCTTTCCAAAAA
CAAGATTACTCTGTTCGTGATTATCGGAAATATTTCAAACCTGTTTTATG
TTATTTGGAAGGTGGCTGGAGCCAATCTGGAAAAGACATTGATGAACCTT
TCGAATCTGACCGTCATTTCGTCGACGCAGCATCATGGCAAGAGCTGCAT
GAAAAGATGAGATATGTTGGATATTCTGGTGGAAAAAGCCGAAATGAAAA
CTTATCCTTCCTACCAACAAAAATCATTAATTTGATTAATGATACTGTTC
CAAGTTTTGCTCAATGGAATTATCGCATCATGTGCCATCCTTTGGGGAAA
GATATTCCTTTAAAACGGTTGAGAATCAAAGAGGATCTGGCAGCTCGCAT
GATGGCCAATCGTGATATCCAATCCTCTTCAACTTCAAGAGGAGCACGTT
TTGAACTGAACCATAAAAATGAAGATCGATTTTATGAACGTCCAACCAAT
TGGAGAAATTTCCTTGATGAGTTGATGGGAGAAATTCCTGGCAAAGACAA
CTACCAAGGTATTTAAGATATGATTTTTAAAACCAAATGTATTTGAAGTT
ATCTGACGTATAACGGGTTTCCAAGTTTTCTCGAAAAAGTAAAAAATACA
ATGGAGTCCCCATAACTCGAAACCACCCGGGAAAAAAAATTGTTAAGGAT
AGGTATGGATAAGCTTTATAAGGTAAATGAAGGGACGAGACAATAGTTCG
GGTTAAGGAGATATTACAATGATAAAGGTTCGAGTTAAAGAGACTGTACT
GTACTTTGACATAAGACGCCGGCTGATAGCTGTACAACGATATGACTATA
CCATTGACTATCTAATTTAGTAGATACCTAGAATCTTTGATATCCATAGT
ACCTAGTAGTAAAAAATGTTTTCAAACTATTTTTTTGTATCTGCTTATTC
TTTTAGCTAAACTTGTTGACGAAGGATTGGAATATCCAGCGCAAAATCTT
GATGGAACCACATTGAATGCTGGTTACTATCATAGATGGTTCACTGTTGG
TAAAGATGCTATGGGATCAGCAAATCAACATCGAGGATTCAGTGATCCTT
ACCTATTCACCGCCATGAACACACAAGCCAAATCAGCTGGAGTTGACTAC
AAAAAATGTATGGGAAACCCAAAAAAATGCCACATGTTGAAACAGCGATG
GTCGTATGCAATTCCCTTGGAAATCATCTATTTGACACCCCTATATAAAT
GGAATCCTTTCAAGTTAAACCACTTTGGAAANTGGAAATCATCTATTTGA
CACCCCTATATAAATGGAATCCTTTCAAGTTAAACCACTTCGGAAATGAC
CACTGGACTAACCGTAAAATTTTGACAGAGGGTGGCAAACGAAATGGTGA
TTGCAAAGGAGGAGCTGCCAAGGCTTTCAATGGTATAAACAGTAGATTCT
TCTATCAAACACCTGCAGCATTTTACTCCGGAGCTTCTGTTAATTCTGGT
GGAGCAGCTGATACAGCACGTGGTGTCACTTGTGTTCTTGATCAGGATGG
GAAAGTACAACAAGTCAGAGCCGCTGGAACACACATTTTCCTACCACAAA
TCAAAGATGTTGGTATTCTGAGAACCAGATTTCCAATTTTTCCAGTTCAC
GGTGAAGGATCGTCTGTATGGAAAGAATTGAACGCTTTGAGAGAAGTCAC
CATGAATGAAGAAATCTGGAAACGTATGTATTGGAAAAATGCTGACCTCG
ATTCATCCAAATACAAGGAATTGGAGCTGGAAATGGGTTACTCTGAATCT
ACCAAAACCAGTCGTCACACTCATTACGTTACTTTTACACCAGAAGAGGT
TTTGCAGCTCAGAGGCTACGTCCCATTGACAAAGATGACAACACAGGCTA
ATGGTCATTCACATCAAGTTAGAATTCGATATCTTTGGTGGATAAAGAAA
TACGATGTGCAATATTGTGATGGATTTCCAAACACAGGTTCAAAGAGATG
CTGGGATACACACGACCGGTTTATGGCTGTTGTTACACAATAAAAAGTTG
TGTATCTTTTCTCTATTATATCTATTTTTCATTCTACGATATTTTTATAT
TATCAATAATAAAGTAGATAATAGGATAATAGCATATAAAAATATATTGT
GCAGAACACATTCTTATAAAAAAAGCGTGTTGGGTACAATTCTAAATCCC
TATTCACACAATCACCA

Coding sequence (CDS) from alignment at scaffold_60:1653257..1656523-

>TCONS_00071480 ID=TCONS_00071480|Name=TCONS_00071480|organism=Clytia hemisphaerica|type=CDS|length=4032bp|location=Sequence derived from alignment at scaffold_60:1653257..1656523- (Clytia hemisphaerica)
CTAAACTTGTTGACGAAGGATTGGAATATCCAGCGCAAAATCTTGATGGA
ACCACATTGAATGCTGGTTACTATCATAGATGGTTCACTGTTGGTAAAGA
TGCTATGGGATCAGCAAATCAACATCGAGGATTCAGTGATCCTTACCTAT
TCACCGCCATGAACACACAAGCCAAATCAGCTGGAGTTGACTACAAAAAA
TGTATGGGAAACCCAAAAAAATGCCACATGTTGAAACAGCGATGGTCGTA
TGCAATTCCCTTGGAAATCATCTATTTGACACCCCTATATAAATGGAATC
CTTTCAAGTTAAACCACTTTGGAAANTGGAAATCATCTATTTGAATGTTG
TCGCTCCTTTGTTTCACCTCCTTGATTATTTACGGTCATTCAGCCACTAC
AGAACAAAAAGTCAATTATCTTACCAACCATGTCAAAGCTTTGACACGTC
AAGTTATGCTTCAACAATTTTTCGATGAGAGTCGTGTCAGAACTGAAGGT
CAGAGTGGTTTGAATTTGATTCGCCAGCGCCAACATGGACTTAAAAACTA
CTTTAGTGAATCACATAGTGGTTGGTCCTCAGCTGCGATCCATGACCACG
CCAACAATGACCGTACCGTTGGAATGGGTGAATTTGCAGCTGTCCTTAAC
GGAGTTGAATTCAAAACAAGACATAACGACTACCGTCTATACATGCCTCA
TCGAACATCAAAGAATCTCAATGCTTGGGAACCAGTACCTTTCCCAGACG
TACCGCCAGAAGTTTTGAATATCGCAGATGTTGATGAACAAGTTGCCGAG
ATGAGAGAATGGTTCAAAGCTTTCCAAAAACAAGATTACTCTGTTCGTGA
TTATCGGAAATATTTCAAACCTGTTTTATGTTATTTGGAAGGTGGCTGGA
GCCAATCTGGAAAAGACATTGATGAACCTTTCGAATCTGACCGTCATTTC
GTCGACGCAGCATCATGGCAAGAGCTGCATGAAAAGATGAGATATGTTGG
ATATTCTGGTGGAAAAAGCCGAAATGAAAACTTATCCTTCCTACCAACAA
AAATCATTAATTTGATTAATGATACTGTTCCAAGTTTTGCTCAATGGAAT
TATCGCATCATGTGCCATCCTTTGGGGAAAGATATTCCTTTAAAACGGTT
GAGAATCAAAGAGGATCTGGCAGCTCGCATGATGGCCAATCGTGATATCC
AATCCTCTTCAACTTCAAGAGGAGCACGTTTTGAACTGAACCATAAAAAT
GAAGATCGATTTTATGAACGTCCAACCAATTGGAGAAATTTCCTTGATGA
GTTGATGGGAGAAATTCCTGGCAAAGACAACTACCAAGATGGGGCTAAAC
TTGTTGACGAAGGATTGGAATATCCAGCGCAAAATCTTGATGGAACCACA
TTGAATGCTGGTTACTATCATAGATGGTTCACTGTTGGTAAAGATGCTAT
GGGATCAGCAAATCAACATCGAGGATTCAGTGATCCTTACCTATTCACCG
CCATGAACACACAAGCCAAATCAGCTGGAGTTGACTACAAAAAATGTATG
GGAAACCCAAAAAAATGCCACATGTTGAAACAGCGATGGTCGTATGCAAT
TCCCTTGGAAATCATCTATTTGACACCCCTATATAAATGGAATCCTTTCA
AGTTAAACCACTTTGGAAANTGGAAATCATCTATTTGAATGTTGTCGCTC
CTTTGTTTCACCTCCTTGATTATTTACGGTCATTCAGCCACTACAGAACA
AAAAGTCAATTATCTTACCAACCATGTCAAAGCTTTGACACGTCAAGTTA
TGCTTCAACAATTTTTCGATGAGAGTCGTGTCAGAACTGAAGGTCAGAGT
GGTTTGAATTTGATTCGCCAGCGCCAACATGGACTTAAAAACTACTTTAG
TGAATCACATAGTGGTTGGTCCTCAGCTGCGATCCATGACCACGCCAACA
ATGACCGTACCGTTGGAATGGGTGAATTTGCAGCTGTCCTTAACGGAGTT
GAATTCAAAACAAGACATAACGACTACCGTCTATACATGCCTCATCGAAC
ATCAAAGAATCTCAATGCTTGGGAACCAGTACCTTTCCCAGACGTACCGC
CAGAAGTTTTGAATATCGCAGATGTTGATGAACAAGTTGCCGAGATGAGA
GAATGGTTCAAAGCTTTCCAAAAACAAGATTACTCTGTTCGTGATTATCG
GAAATATTTCAAACCTGTTTTATGTTATTTGGAAGGTGGCTGGAGCCAAT
CTGGAAAAGACATTGATGAACCTTTCGAATCTGACCGTCATTTCGTCGAC
GCAGCATCATGGCAAGAGCTGCATGAAAAGATGAGATATGTTGGATATTC
TGGTGGAAAAAGCCGAAATGAAAACTTATCCTTCCTACCAACAAAAATCA
TTAATTTGATTAATGATACTGTTCCAAGTTTTGCTCAATGGAATTATCGC
ATCATGTGCCATCCTTTGGGGAAAGATATTCCTTTAAAACGGTTGAGAAT
CAAAGAGGATCTGGCAGCTCGCATGATGGCCAATCGTGATATCCAATCCT
CTTCAACTTCAAGAGGAGCACGTTTTGAACTGAACCATAAAAATGAAGAT
CGATTTTATGAACGTCCAACCAATTGGAGAAATTTCCTTGATGAGTTGAT
GGGAGAAATTCCTGGCAAAGACAACTACCAAGATGGGGCTAAACTTGTTG
ACGAAGGATTGGAATATCCAGCGCAAAATCTTGATGGAACCACATTGAAT
GCTGGTTACTATCATAGATGGTTCACTGTTGGTAAAGATGCTATGGGATC
AGCAAATCAACATCGAGGATTCAGTGATCCTTACCTATTCACCGCCATGA
ACACACAAGCCAAATCAGCTGGAGTTGACTACAAAAAATGTATGGGAAAC
CCAAAAAAATGCCACATGTTGAAACAGCGATGGTCGTATGCAATTCCCTT
GGAAATCATCTATTTGACACCCCTATATAAATGGAATCCTTTCAAGTTAA
ACCACTTTGGAAANTGGAAATCATCTATTTGAATGTTGTCGCTCCTTTGT
TTCACCTCCTTGATTATTTACGGTCATTCAGCCACTACAGAACAAAAAGT
CAATTATCTTACCAACCATGTCAAAGCTTTGACACGTCAAGTTATGCTTC
AACAATTTTTCGATGAGAGTCGTGTCAGAACTGAAGGTCAGAGTGGTTTG
AATTTGATTCGCCAGCGCCAACATGGACTTAAAAACTACTTTAGTGAATC
ACATAGTGGTTGGTCCTCAGCTGCGATCCATGACCACGCCAACAATGACC
GTACCGTTGGAATGGGTGAATTTGCAGCTGTCCTTAACGGAGTTGAATTC
AAAACAAGACATAACGACTACCGTCTATACATGCCTCATCGAACATCAAA
GAATCTCAATGCTTGGGAACCAGTACCTTTCCCAGACGTACCGCCAGAAG
TTTTGAATATCGCAGATGTTGATGAACAAGTTGCCGAGATGAGAGAATGG
TTCAAAGCTTTCCAAAAACAAGATTACTCTGTTCGTGATTATCGGAAATA
TTTCAAACCTGTTTTATGTTATTTGGAAGGTGGCTGGAGCCAATCTGGAA
AAGACATTGATGAACCTTTCGAATCTGACCGTCATTTCGTCGACGCAGCA
TCATGGCAAGAGCTGCATGAAAAGATGAGATATGTTGGATATTCTGGTGG
AAAAAGCCGAAATGAAAACTTATCCTTCCTACCAACAAAAATCATTAATT
TGATTAATGATACTGTTCCAAGTTTTGCTCAATGGAATTATCGCATCATG
TGCCATCCTTTGGGGAAAGATATTCCTTTAAAACGGTTGAGAATCAAAGA
GGATCTGGCAGCTCGCATGATGGCCAATCGTGATATCCAATCCTCTTCAA
CTTCAAGAGGAGCACGTTTTGAACTGAACCATAAAAATGAAGATCGATTT
TATGAACGTCCAACCAATTGGAGAAATTTCCTTGATGAGTTGATGGGAGA
AATTCCTGGCAAAGACAACTACCAAGATGGGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044381XLOC_044381Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071480-proteinTCONS_00071480-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071480-exon-scaffold_60-1575043694:1656267..1656523TCONS_00071480-exon-scaffold_60-1575043694:1656267..1656523Clytia hemisphaericaexon
TCONS_00071480-exon-scaffold_60-1575043694:1654916..1655909TCONS_00071480-exon-scaffold_60-1575043694:1654916..1655909Clytia hemisphaericaexon
TCONS_00071480-exon-scaffold_60-1575043694:1653257..1654517TCONS_00071480-exon-scaffold_60-1575043694:1653257..1654517Clytia hemisphaericaexon
TCONS_00071480-exon-scaffold_60-1510915933:1656267..1656523TCONS_00071480-exon-scaffold_60-1510915933:1656267..1656523Clytia hemisphaericaexon
TCONS_00071480-exon-scaffold_60-1510915933:1654916..1655909TCONS_00071480-exon-scaffold_60-1510915933:1654916..1655909Clytia hemisphaericaexon
TCONS_00071480-exon-scaffold_60-1510915933:1653257..1654517TCONS_00071480-exon-scaffold_60-1510915933:1653257..1654517Clytia hemisphaericaexon
TCONS_00071480-exon-scaffold_60-1491911889:1656267..1656523TCONS_00071480-exon-scaffold_60-1491911889:1656267..1656523Clytia hemisphaericaexon
TCONS_00071480-exon-scaffold_60-1491911889:1654916..1655909TCONS_00071480-exon-scaffold_60-1491911889:1654916..1655909Clytia hemisphaericaexon
TCONS_00071480-exon-scaffold_60-1491911889:1653257..1654517TCONS_00071480-exon-scaffold_60-1491911889:1653257..1654517Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_60supercontigscaffold_60:1653257..1656523 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.169455	0.225335	0.104654	0.0511938	0.124647	0.0656652	0.0792223	0.074167	0.0649075	0.144717	0.499435	0.194933	116.01	117.989	50.8658	136.228	26.0779	31.8109	249.25	206.169	134.837	157.943	33.841	61.8557	69.2186	67.9461	0.25348	0.0450868	3.88133	1.93368
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00071480 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top