TCONS_00071462 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00071462
Unique Name	TCONS_00071462
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2905

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_60:1465283..1480227-

transcript sequence

>TCONS_00071462 ID=TCONS_00071462|Name=TCONS_00071462|organism=Clytia hemisphaerica|type=transcript|length=2905bp
TAAATAGgttaaataaaaatacaaaaaaaatatggCAGGAATGAAATTTG
AGTACGATGAAAAGGGAACAacattttattactttattCTTTCATTTTGT
GCTATATTCTTGATCCCAACAACCTATTATTTATTCCCCGAtgattcaaa
gaaaaagaagacagaAGATGACATAAATGAAAAGAGGAAGCCATGTTACT
GTCCTCCATGTATGGCAAAACAAGATTTGATTGTCAAAAAGATTcctaag
aaaaaaatatacctTATACGAGCAGTGCTAATAATCTTGTGGGCATTATT
GATCACTGGAGTTGTCAAAgtatcacaatttgaaaaagaatatAGTGAAT
ATAATCCTTATGACATCTTACAGATAGAAGTTgGTGCTACCCAAGCAGAA
ATTAGGAAGAAATACAGAGATCTTAGTAAGCTGAACCATCCTGACAAAGG
AGGAGATGCTGTTGTTTTCATGAAGATTTCGAAAGCTTATCAAGCTCTAA
CAGatgaagaaactaaaaagaATTGGGAAGACTATGGCAATCCTGATGGG
CCAGGAGCAACACAGTTTGGCATTGCTCTACCATCTTGGATTGTCGATAA
GAAGAACTCAATGTGGGTTCTTGGGGCATACATGCTTGCTTTCATCATTA
TACTGCCAATAGTTGTGGGCTCATGGTGGTATCGTTCTATACAATACAGT
GCAGAAGAAGTTTTACTTGATACAGAACaattattttggtattttcttcA
TCGGACACCTAACATGTCACTAAAACGTGCAATAATGATACTCGCTGGTG
CAttagaatttgataaaagtcacAATGCAGAAGTACAGGAAAGACCAAGT
GACAATGTTGAACTTCCACAGCTAATGAGAGAGTTACCGCAGCTGAACGA
GAAGAATAAAGAACGACCTCTATGTTTTGCATACAGTATCAAAGCACGAG
CGCTTATGCATGCTCATTTCTCTAGGATAGCTTTACCACAACAAACACTA
TTAAAAGATTTAGAATTAATTTTGAAGAAATCACCAACGTTAGTACGTGA
GATGATTAATATCGTTGGCCAGTTGATGTATTTAGCCAAAATGGGAAGAG
tatCTCAACCTCCAAAACTTGAAACTATGGAGAATTTAATGAAATTGAGT
CAGATGCTGATACAAGGAGTTTGGGAATCTAAATCGACATTTCAGATGTT
ACCTCACATTTCACANAAATTGAGTCAGATGTTGATACAAGGTGTTTGGG
AATCTAAATCGACATTTCAGATGTTACCTCACATTTCACAAGAAAACCTA
CGTCATTTCAATACTAAAAAGagGAAAATAAAGACGATTCGACAGTTTGT
TGGGATGAACAACACTGACCGACGGATGCTTTTGCGGACGTTATCGGATG
AACAATATCAAGATGTATTAAATGTGTGTTCTTCTTTCCCTCATCTTGAA
ATTGAGGCTACAACTAGAGtCATCGATGACGAAGATATGGAAACTGTGAC
AGTAGGTTCCACTGTCACCGCCCTGGTCACACTCACCAGAAAAACTATGG
AAgaGTTCTTTGGTGATGAAAGTGAAGAAGTATCTTTGAATAATATCGAA
AATAACGATGACGCTACAGCGTCACCGAAGCCGGTCAAAGGTTGGCAACG
TAAAGTAAAGAAAGGGAAAGGAGCTAAGAAGCCAGTCAAAAAGCAAcctg
tcaaaaagaagaaaaaagaggaTGANCGCCCTGGTCACACTCACCAGAAA
AACTATGGAAgaGTTCTTTGGTGATGAAAGTGAAGAAGTGTCTTTGAATA
ATATCGAAAATAACGATGACGCTACAGCGTCACCGAAGCCAGTCAAAGGT
TGGCAACGTAAAGTAAAGAAAGGGAAAGGAGCTAAGAAGCCAGTCAAAAA
GCAAcctgtcaaaaagaagaaaaaagaggaTGAGAAACAAGAAgacaaaa
cagaaaacaaagaagaaaaagatgagGAAGCTGATGAAGAATCTTATGAC
GgCGTGGAAAATATGGATAGCGAAGATGAGAATGCAGCCGATGATGAGGC
GGACGAACAAGCAGACGAAGCGGATGACAAAAAGGATGAAGAAGATGATG
ATGAGGATGAAGGAAATATGGTCGAAAGAGACGATGGGGCGGATGATGAA
TGGTCCAGTATAAAAGATGATATGATGCAACCTGATCGTCTCTTAGATGC
CAAATCCAAAGAAAGTCATATCGTTCATTGTCCTTACTATCCAATGGAAA
AACACGAATATTGGTGGGTATACTTGATCAATAAGAAGAATAATCAATTA
GTCACAGCTCCACAGCAAGTCACCAATCTCAAAGTTACTGAAAAGGTGCA
ATTGAAATTCTCAGCGCCAGAGAAACCAGGCATTTATCAATACATTGTGG
TGGTCAAGTCAGATTCTTATGTTGATTTCGATATGACTAAACCTCTAAAA
GTGGCAGTATCAGAAGCGAAAGATTTCGATCCTGGAGAGCATTGGAATTA
TTCGAGTGAAGATGACGATAAAGATGATTCCGGTGAAAGCGTTTACgaaa
ctgaagaagaagatgatgatgatgacgatgagGATTAATCACGCCATCAG
GGTGGAACGCCCGTCAAACAACCGCCCGAATAGTCAAAAGTGTCAAGGGC
GTCCGAACTTCAGATCATGGTCTCTCAGACAGATCTTTTTAGACTTGTCC
AAGGAAAACTCGTTCCAAAACAACTTTTCGAAAAAGGTTACCAcatgttt
gatttttaaaacaaatttcagACAATTCTAGCTTCTCTTTTATATTGACC
ACGCCCAAGGGTTTTTAGTACTTTACTTTCGCACCTCTTAAGCTAAAGTG
CCGCTCGTATATTTCCCTCTTTTTAATTATTCAGTACTGAatacaaataa
taaaa

Run BLAST on NCBI

transcript from alignment at scaffold_60:1465283..1480227-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00071462 ID=TCONS_00071462|Name=TCONS_00071462|organism=Clytia hemisphaerica|type=transcript|length=14945bp|location=Sequence derived from alignment at scaffold_60:1465283..1480227- (Clytia hemisphaerica)
TAAATAGGTTAAATAAAAATACAAAAAAAATATGGCAGGAATGAAATTTG
AGTACGATGAAAAGGGAACAACATTTTATTACTTTATTCTTTCATTTTGT
GCTATATTCTTGATCCCAACAACCTATTATTTATTCCCCGATGATTCAAA
GAAAAAGAAGACAGAAGGTATGTAATCATAATTTTGTATACATTAATTGG
ATAACTGTAATCTATGATTTTTTAGACCAATTCTAAAGTGGCAGAGTTTT
CTGTTTATCATTTCACTTACATTTTGATTGTAGATTTAAAGAGTAGTTAT
AAATTATTATAAGTCTAATGAACTGCCAGTATTCAGTATTATATTGATTC
TGTATTTTTATTTATCCCAGATGACATAAATGAAAAGAGGAAGCCATGTT
ACTGTCCTCCATGTATGGCAAAACAAGATTTGATTGTCAAAAAGATTCCT
AAGAAAAAAATATACCTTATGTATGTGTTATTACTTCTACTTTAATTGTT
TTTCAGTTGTCTATTCAATACAATCTACTATAATATACGCTTTTTTTATA
AGAACATCTATAAAAATACCCTAAGATTACGTTCTAGAGTTTCACAGAAT
TTGATAAGAATACAGTCATTTCGTATTTGGTTAACAGAAAAACTTCTTCT
TTTGTTAGACTTTTAAATTGAAACTGTGAGGCAGAAATATGATTTTAGCT
CCCAATGTGCACTCAAAAGTCCCAAACTCTCAAATCTGCTCAAATTGATC
ATTTCTCATGATGTTTGTTGAAAAGTCACTAGTCTAAGAAGTAAGAATGG
GTTAAGAATTTTTTACCCTCAATTTTGGCAATTTCTTAAAAATACTTGAC
CCTCATCCAAACTACTATTCTTATAAAAAAATGTGTTTATTTGGTTTGGT
GTTCAATCCAGCTTCTTCAGGATAAAGAACATCAAAGGACATACTCTAAT
AACATTAAAAATTCTTTGAACTTTTCAGATCTTATCAATTTCTCATGCTT
TTTTCTAGACGAGCAGTGCTAATAATCTTGTGGGCATTATTGATCACTGG
AGTTGTCAAAGTATCACAATTTGAAAAAGAATATAGTGAATATAATCCTT
ATGACATCTTACAGATAGAAGTTGTAAGTTGATTTTGTTGTGGACCCGTT
CTTTTTTTCTTTTATTCTTGTTTGGATTCAATTGCAACTTTTTAACCAGG
TTAGAGGAAAAGAAGTGTGAACCAGAGTTGATAATGAAATGGGCTAAGTT
AAAGGTCTAAGTGGGCTTTCTACCAAGTTTGGTTCTTAAGGTGATAACCT
TTCTTTGAGTTTGATAAATATTGAAATAATTGTCATCTTTTGTTTTTATT
TTTTTCTTCTAGGGTGCTACCCAAGCAGAAATTAGGAAGAAATACAGAGA
TCTTAGTAAGCTGAACCATCCTGACAAAGGAGGAGATGCTGTTGTTTTCA
TGAAGATTTCGAAAGCTTATCAAGCGTAAGTAAATTCAAAATGAAAAAAA
CTAATTTTATGTTTTAAGGTTAATAATCCTAATCAATTGTTACTGATGGG
CCAACCTAGTTGTAACAGTTATTTTATTGATTCCTAAAATTTTAAGGTCA
ATCATACCCGTGAAAACAACTAGTTGAATTGGTTTTGCTTTCAAAGCTTT
TGTCTTAGGAAACTATTCACGTCTTTGTAATTTAGACCTTGCCTTTAGAC
CATCTACAAACTCTGATTTTGAATGGTCCTGGCCGCTCGTTTGATCAGTC
ATGGTCGCTTGTTAGTAACAATTACATCAAAAAAATTGTTATGAAATTTC
TCTAAATTAACTGGTCATTTACCAGCCCTTAAAAGACTGTCTAAGGGCCG
GTTCAATTTTCAGGTACTTAAAATCCCTTTGGGAGTCTTATTATACCTGG
CTAGAGTAAGATTAATGAAATTCATCATTCTTTTGATTCAAGTCTAACAG
ATGAAGAAACTAAAAAGAATTGGGAAGACTATGGCAATCCTGATGGGCCA
GGAGGTTTGCTAAAATTTTTAGATTCATTTCTTAATAAACATAAGTAAAC
TTTCTAAATGAAAGACTAAAGCGCTGATATGACAACATTTCTCCTAGCAG
GCATCCATAGAAAATATCAGTCGTGCTTGCAGGCCCTATGTCTGATTGAA
CTGTCTTTTCTATTGGTGGTATCAAATGGTGAACGGTTCTTAGCGCTCCT
ATAGTAGGAATTAGTTACACCCAGTCAAGAAAAGAACAAGATGTAATGCA
CCTTCCCCCCTGCCTGGAATGGTAACAAAGCTATATTCACAAAATTTCTT
TTGGATTAGAATTTTTTTTTGAATTAATTTCTTCAATAACAAATCTTTAC
ACTTTCAGCAACACAGTTTGGCATTGCTCTACCATCTTGGATTGTCGATA
AGAAGAACTCAATGTGGGTTCTTGGGGCATACATGCTTGCTTTCATCATT
ATACTGCCAATAGTTGTGGTATGTTTTCACAAAATTCATTTTTTCAAAAA
ACCTCTAAATTGTTTAAACTGAAATGAATAAAAAAAGTGGCCTGATTGGA
CTGAAAATTTGTCTGAATATCTTAGATTTTAGTAGAATTAACTCAAGTGA
TAAACTCTTGGATGAAAACAAAAATTCTCCCCTCCAACAAAGATTGTGCT
AAATTAATGGCTTATTAGATTGTAATATTTAACTTATAAAAGAAACTGAA
TGTTGTTTTTAGGGCTCATGGTGGTATCGTTCTATACAATACAGTGCAGA
AGAAGTTTTACTTGATACAGAACAATTATTTTGGTATTTTCTTCATCGGA
CACCTAACATGTCACTAAAACGTGAGCAGATGTTTGAACTGAAACATTTT
GTTAATTTTTGCGCATAGAGTGTTTTTCTATCACTGCTACACTCTATATT
CGAATATTAACATTGCATAATCTTGATACCAAATTTTGTGCGTTTTTGGT
CCTCTCTGTAAAATATTGCATGAGAAACCGGTACTTTTTCTCAGTGCATT
ATGAATGAAGCAGAATGTGAAGTTCATCGCATGTGGGCAATATCATATTC
TAAGGAGGAAGCAAGTAGTTGGGCTTAGCATTGATTATCGAATATACCCT
GATTTTCATTTGCATTGATTTTCTTTCATCTCAGGTGCAATAATGATACT
CGCTGGTGCATTAGAATTTGATAAAAGTCACAATGCAGAAGTACAGGAAA
GACCAAGTGACAATGTTGAACTTCCACAGGTAAGTTACTGGTCCTCTAAT
TCCAATTAATTTATTATTATTCATTATTAAGTTATTATGTAATTTTCTTG
TCACAGCTGACTCAATTTTCCTAGTATTCACACTAATATATACTTAAAAA
ACAGGTCGCATTTTGAGTGACAAAGTTTTCCATGGACACGTTCTAATGTT
CTGTCAATCGCTAAATCAAGTCAATCAATTTTGTATAAAGCCTGCCTCTA
TTTTGAGTTAATGTTTGAAATGACAAAATGGTTCCCTTCTATTTTAGCTA
ATGAGAGAGTTACCGCAGCTGAACGAGAAGAATAAAGAACGACCTCTATG
TTTTGCATACAGTATCAAAGCACGAGCGCTTATGCATGCTCATTTCTCTA
GGATAGCTTTACCACAACAAACACTATTAAAAGGTAAGGTTGATGCTGGT
CGTGGTAGATCATTCTGATAGTTAAACGATTTAGTATCAATTACCTATTG
TTTATATTCTTATTATCTTGGTATTTTTTGAGAGAATTGATGATATATTC
TTAGTTGCCAGAAAGGCACTGGGACTATTGATATTTTCATTAAAGTACCC
TTATCTTTTCTTCTTCACAGATTTAGAATTAATTTTGAAGAAATCACCAA
CGTTAGTACGTGAGATGATTAATATCGTTGGCCAGTTGATGTATTTAGCC
AAAATGGGAAGAGGTATGAAAAATGTTTCTTGTTTGTTGCAGATATTGAT
TTTCAATAACCATGGTAGTCTGGAGGCTTACTAACTTTTCCTCGATTTTA
CAAAGCTCACATGAGTGATTCAAATTTGAATGTTTACAAAAATCAGCTAA
GGAAAAGGCGTGAACGACTTTATAGAATGTTTGTATAATACTTTGCTACT
ATTGATTAAATTCATTCTGTCTTCTTTATTTTTTTCAGTATCTCAACCTC
CAAAACTTGAAACTATGGAGAATTTAATGAAATTGAGTCAGATGCTGATA
CAAGGAGTTTGGGAATCTAAATCGACATTTCAGATGTTACCTCACATTTC
ACANAAATTGAGTCAGATGTTGATACAAGGTGTTTGGGAATCTAAATCGA
CATTTCAGATGTTACCTCACATTTCACAAGAAAACCTACGTCATTTCAAT
ACTAAAAAGGTATCACTTGCCATTCTTAAAGAAACAAATGTTGAAATTCA
GTAGATATCCGACTGAAAAAATCCTTTTCCTGTGTCCATTTTCATAAGAG
TTTGTTATGGTTTACAGAGCGGTGGCTTAACTTTTTTTGTTTGCTTATTC
TCGGCTTTTCAACATTTACTGTTTGTGTCATATAATTCTGGGCGCTACTA
GAAATGTTATAAAGATGAGGTATAGTGTCTTAGTGGGTTCGTTACCACCT
TTGAAAAAGGCAAACAAAACTGTTTTGACCCCCCTCTTCTTGTCGTCCCC
TTTTTAAAATTTTTTATATCCTAACAACTATTTGAAGCTTTTGCAATTTC
AAACTGTCTTATCGTTATAACTGTACAATAGCTTTGAGTAAGCTTTAAAA
TAAGTGCTCAAGTTGTAGAGTGGATCATTGTAACAGTTTGAAAAATTCTT
TTTTCAGAGGAAAATAAAGACGATTCGACAGTTTGTTGGGATGAACAACA
CTGACCGACGGTAAAGGCTTTTAGTTTAACGTGAAGGAATTCAAAGATTA
CTTTTATAACAACCTGTATAAACCTGTATGAAAGAATGTATTTTGACAGA
GAATCGTTTCTACTTTTCACTTTTTCACTGATCTGTTCAGTTTTATAGAA
ACCTTTGTTAAATGCTTTCAGGATGCTTTTGCGGACGTTATCGGATGAAC
AATATCAAGATGTATTAAATGTGTGTTCTTCTTTCCCTCATCTTGAAATT
GAGGCTACAACTAGAGGTACTGTTCATTATCAAATTCCAATCTTAACCTC
TCTACACGCTTATGGTTTGAAGAATTTTCGTTGATGCTTTTCTGGGAAAA
AACATAAATCTCCTATGAGGTATAAAGTCGAAATTTCCAGACAGGAGATA
ATTATATACGAAATTCCTTATAAGCATTTTCATAAAGAGCCAGATAATTC
ACACCCCTCAGGTAGAAATACAGTGTCTAGCACTGATGTTTGAGGACCCA
TTTTAAAAGTCTTTCGGCGTTAGAAATTTTGGATTTTCTTATTGTTTCCT
TTTCTTTTTAGTCATCGATGACGAAGATATGGAAACTGTGACAGTAGGTT
CCACTGTCACCGCCCTGGTCACACTCACCAGAAAAACTATGGAAGTATGT
ACACCACTTCCTTTTTGTATAGTAACGGGTGTTATTTTGTTTCTGCTTTC
TCTCAAGCTAAAACGAGACTGAATAAGTTTTTCAGGTGGGCGTCAGTGTA
GCCTTAGCTTTCTCTTATAAATAAGTTGCATTATGGTTAATGTTTCTTTT
AATAAGAAGATTTGCTTGAGTTAGAGACGAAGACGAAATAGAGTGGTGCT
TGTCACAAAAGACTACCTTGTTCAAATATTACGCTTTCTTTTTTGGACGG
AAAAATCCATCGAATAACACTGTTTTTATAAAAAAAAATTATTTTTACAT
TTTAGGAGTTCTTTGGTGATGAAAGTGAAGAAGTATCTTTGAATAATATC
GAAAATAACGATGACGTAAGAATTTCGAAATTTCTACAAATTGATATTTT
GTTTAAAACGCTAAATTTGACAATCATCTAAAAGAATTGCCCGATAATTT
TACAGTCCATGTTTTCTAGAGACGCTAGAGTTTTATTCTGTTTTATCCTA
TTTCTCAGGTTTGTTAAACGGAAAAAAGTTTTCGTCTTCATTTTGTTATC
TAAGTAATTGTATTATCCCAGTTATTGATTTTCAATGTTCATATTCAACA
GGCTACAGCGTCACCGAAGCCGGTCAAAGGTTGGCAACGTAAAGTAAAGA
AAGGGAAAGGAGCTAAGAAGCCAGTCAAAAAGCAACCTGTCAAAAAGAAG
AAAAAAGAGGATGANCGCCCTGGTCACACTCACCAGAAAAACTATGGAAG
TATGTACACCACTTCCTTTTTGTATAGTAACGGGTGTTATTTTGTTTCTG
CTTTCTCTCAAGCTAAAACGAGACTGAATAAGTTTTTCAGGTGGGCGTCA
GTGTAGCCTTAGCTTTCTCTTATAAATAAGTTGCATTATGGTTAATGTTT
CTTTTAATAAGAAGATTTGCTTGAGTTAGAGACGAAGACGAAATAGAGTG
GTGCTTGTCACAAAAGACTACCTTGTTCAAATATTACGCTTTCTTTTTTG
GACGGAAAAATCCATCGAATAACACTGTTTTTATAAAAAAAAATTATTTT
TACATTTTAGGAGTTCTTTGGTGATGAAAGTGAAGAAGTGTCTTTGAATA
ATATCGAAAATAACGATGACGTAAGAATTTCGAAATTTCTACAAATTGAT
ATTTTGTTTAAAACGCTAAATTTGACAATCATCTAAAAGAATTGCCCGAT
AATTTTACAGTCCATGTTTTCTAGAGACGCTAGAGTTTTATTCTGTTTTA
TCCTATTTCTCAGGTTTGTTAAACGGAAAAAAGTTTTCGTCTTCATTTTG
TTATCTAAGTAATTGTATTATCCCAGTCATTGATTTTCAATGTTCATATT
CAACAGGCTACAGCGTCACCGAAGCCAGTCAAAGGTTGGCAACGTAAAGT
AAAGAAAGGGAAAGGAGCTAAGAAGCCAGTCAAAAAGCAACCTGTCAAAA
AGAAGAAAAAAGAGGATGAGGTAAGGTGCTAAGCTATAACGAAGTTTAAA
GTAAATAATAAGTAATTGCATTAAACTTATTAAGGAATCGTTTAAAATAC
CGACCTATTCTAAACAATTGTGGAGTTTTCTCAGGTTTTTTTATTTATCC
TTGAGTTATGCTACGACTATATAGAATTATTACAATCCCTTTATGAATTG
AGCAAATATTTAAGCCATTTGACTAAATACAAAATAATTATACTTAAATT
TATTTTTGATAAATTACGAACAATTCTGAAGATCCAAAAATTGATAACAA
TCACTAATCTTGGTACCGATGTACTAGTCACGATGTCTGAGATTTTAGTA
CTGACCCCTGGGGTGGCTTGATGGTGCTTGTCAGAATACTTTGCATTCGG
ACTAATGGTGTTTTCTTTTCCTTTACATCGAAAGAAACAAGAAGACAAAA
CAGAAAACAAAGAAGAAAAAGATGAGGAAGCTGATGAAGAATCTTATGAC
GGGTAACATTTTTTTATTTAACTGAATGCACTTCAAACGATAGATTTGTT
TCTATGTGAGACCCGGATCATCAGATTATTAGCGACCAGAAGGTGTGACC
ACGCTATAGTGCTTTATTCATGTGGANGGATTATTTGCGACCAGAAGGTG
TGACCACGCTATAGTGCTTTATTCATGTGGAGTTCAAGCTCAACCCACTC
TTTTTTAGAGTGCCTAAATATTTCATTGACTGTCTTGTGTTGATCTGAGT
TTTTCTGACATTTATTTTTATTCAAAGTACTCATTTCATGGGCGGGGTCT
GGAAGCTTTCAAATCCCTCTTCGACATACTGAACTGGATTCATTAAAATT
CATTAAAATGAAAAGGCTGGTGCGTGAAAATTTCACTACAGTGAAGTCTG
TTATAACTCAACACGCGCGGGGAGCTGCGGGGAGCGCAAATTTGTTCGAT
TTTGACAAAACTTATTTTATTTAACATATCTAATATTTGGCGTGCCGGGA
CTGCCTCCGTGCAAAAATTGTGTAGTATATATTTAATATTTGGCGTGTCG
GGATTGCCACCGTGCGATAATACTTAATATGCGGAAAAAAAATTTGTTCG
ATTTAAGAAAGTTTTGCGATGTAAAGAAAGGCTTTTACGACATTTTTAAC
TGAAGGGACTAGAAAATTTGTTCGAATTAAGGAGACGGAGTTATAGAGGC
TGGAGTTAAGACGAGATTAGAGTTGATTTAGGATTTGAGTTAAAGAGACT
TCAGTGTTTTTAGTCAAACTGGCTATTTTCCGTTGATAAGTCTACGGAGT
TAATAATTTTAAATAAGATGAATTCTTTTCTCATTCAGCGTGGAAAATAT
GGATAGCGAAGATGAGAATGCAGCCGATGATGAGGCGGACGAACAAGCAG
ACGAAGCGGATGACAAAAAGGATGAAGAAGATGATGATGAGGATGAAGGT
AAGAAAGATTTTCTCAGGGTATGCATAGAAGTTGGGAAATATTTTCCTTT
AGCATTAATAATGACATTTTCATCGCGTGACTTTTGTCGTAGTTTCTCTA
GTCACTTAGTCTTACTCAGCTATTGAGTCTCGGTTTTCTTATGCCTTTCT
ATTATTTCTGCTCGGGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGAGTTTCAAAAGA
TTTTCCAAAGGGGGGAAAAGGAAAAATGGAAATCCAGGGGGGATTTCAAA
AATGTGCAACAAAGTTTTTTTCGGGGGGTGGGGAAGAACTTTTCACCTTT
TTTCACCTTTTTTCACCTTTTTTAGTTTTTTTACATATGCATGTTTTTCT
TCCACAAATTACATGGCAGATGTTCTTTCTTGGATAAATAGTTATCTTTT
GTAGAATGTGTGAATTATAATTGATAGAAAACATAATAATTTTTTTATTA
TCGATACCATCTTGTCTCCAAAATATTTGGTTCTTCTTACAAGAAGTTAG
GATATAATAATATATGTGCTATGAGGCGAGACCAATTTAATTTGTTGTTC
TACGGGCAGATTGTTAGCAAAATATGGGTCGGTTGGTCGGTAAAATAAAA
ATAAAATTTTCATTTATCAGGGTTGTTAAAGTACCGAAAATGTTTTCCAA
AAAATATCTGGTTCAAAAATTCACTTTTTTTTGTCTTCGATGAAGATGAT
AAAATCTTAATGTATGGAAATAATGCGTGATTTTCTAACTTTTTCAATTT
TTTTAATTAATTTTCAGCTTTATTCAAATCTGATTCTTACAAATAACTAG
TGTGTAAAATATATTGTAGTGGAAATTCAATATTATTATTTTTTTGATTT
TAGCAAAAATAGGGTCGGTCGGGCCCGTAGAACAACAAATTAAATTGGTC
TCGCCTGAATAAAAATAAAATCGAAAATTTTTAACATATAAACAGAATAC
AGTAGGCCAGAGATGAGATTGGCAGTTATTATTATTAAATGCATATGAGT
AGATTGTATCATCGATAAGAAGCCATCGATAATGACTCAATCTGGGGTTG
GTCTAAGTATCAATCAGATTCATGCTCCCTGGTCAGTAAAATCTGGTTCT
ATGCATTCATTTTCGGTATTTCTATTCTGGTCTGTAAAATATTTAGGTAC
TCCACAACCTAGCCCAATTGGCTACCCCAATTGGCTACCCTGCTCTTTAG
ACCAACCCCTCAATCTGGATAATTGGAGCTGAGTGGATGAAGAACGGAAA
TATACCTTGGTATCTAGACTTTAGATTCCCTTTTAAAATTGAATAATTGA
ATAATAAATAAATAATATTAGTAATAAATAAGTATAAATGGTAATTAGAG
GCAAAGCAAAAATGAAGCAGGACTAAAGAGCAAGCTTAATGTTGACGAAC
TATTCGTTATAATAGTATTGAGATTTTACTGCTTGCTGTTTTGATTTATT
GACTTGAAGTGAAGTTACAAGATAGCGACTAAAGGATGAGAGGCTTTTGC
ATTATCTAGGTAGGTTCAGAGATTGTACCATTAGTCCAGGGAAAGTGTGT
CAATTGTGAGTTTTTGGCTAGAAAGCATGAAATTTGATACAGTGGTACCT
TAGGGGGTAAGAAACATTTTGAACTTCTGATTCACTTCCGGAACACCTGT
TTGTGTATCATATAATAGTTAAGAAATTTAACACTTCTATACACCTTTTC
GACCGTAGTCACGCGGTCAGGCGCGTGCCACTTATATTTAATTTACCACC
CTAAACTCGATCCAATCCTTTTTTGTTACATTTTTTCTATTGTCTTCAGG
TGCGAAAAAAGACTGGAACGGTTTTAGGGTGGTAAAATGGACAAAAAATG
ACCGCGCGGCAATTTGCGGCTAGGGTCGAAAAGGTATATTGAAAAGGACA
CGTGTAAAAAAGGCACAAATGAATAAATGTAGATTAGATATTGGTTTAAT
TGGTTCTCCATGTAGAGTTTAGCCAATGATGAAACATAAACTTATAAACT
TATAGGATCAGAAGTATCGAGACTAATATATCGAGTTTCAAAACGAAGAT
AGAATTTAGAAATTCAAAAATAGGAGAATTCTAAAAAAAAGAAGCTAAAT
CTAATAAAAACATTTATTACATTTTTTATTAAAATTTTCCTTTTTCATAA
TATTTTTCACATTTGCATAATGCATTATGTCAGGAATATCTAGAGAACTT
TTATTTCATGAGTCTTGCAGAGAAGTGCGACTTATTTTTAAATTGGTTTT
CCACCGTCATATAGTAATTTATTGCTGTAATTTCGAAAGCAATAGAGAAA
ATGAATGCAAATGGTAGCCACGATTTCACTATGAAAAATGGTAATATCAC
TATCGATAGCGATAATCTCAGCGGTGAAATTCATCCAGAAGTTCTAGTGA
ATATTCGTGAAGTAGCCGAAGAAACTTTTTATTACTACGTTCTTAATATT
TTGCCTGGTTTGGTTGCGATTGGTGGTTTCTGGAATCTGCTTATCATCGT
TTACTTCGTCAAAATCAATTTGAAGAAAGGATTAAAACGAATGAGCTCGT
ATCATCTTCTGATCATTAATCTTGCTTTGGCCGATCTAGCCNGAAGGCTC
TATATGATTTTATTTTTACTCCAATTCTCAATTTCGGTTTTTTATTAAAA
GACTATTCCATGCTGGCTTCTTAAGTAGAAAGAATTAAAAAATTTAAACA
CGTTTAACAATTGTGTTTTGAAATTTACGCTGTGCGGTACTCTAAAAGAT
GAAATTAGAATCCAGATTTTGTATTTATAGAAGCTATTTCCTGCTGTTGG
GCAAATTGGCTGTACCAAGAAATTGTTATTGTTTTTCTTGCTCTTATATT
TTTTGTGATTCATTTGTTCAAAAATAAACATCCCGACACAATGTNCACCT
CTCATTTCCTTTTCAAACACACATGGGAACTCCCGGCATTTGCATGTCTT
ATATTCCGTGTTTATTTCCCGAACGTTGTTCCAATGACAGCATCTTGGGC
ACTGACCTTAATTTCTTTTGCTAGATATCGCTCCATTACCTACCCAATGG
CTGTGCGAATCAATAANTTTGATTTAAAACTAAAGAAATATCACCTTGAT
ACTCTTCACTCTTGGTACGCCCCTCGCTTTTTTTTTTATTTTTGTAAAAA
TTTTCCGAACGGGACATTTTCATTTTAATCCTCCTGCTAATCAATACACG
CTTTTTTAAAGAATATCTTCTATAAAAATATCAGGGTGAAAATTGGCCAA
ATCGTAAGAACCCCTAAGAAAAACCTCTAGGGTGAGTTTCACAGAATTTG
ATAAGAATACAGTTATTTTGTATTAGGTTAATAGAAAAAAACTGCTTCCT
TTGTTAGACTTGAATTTACACTTTGAGGCAGAAATGTAATTTTAGCTCCA
AATGTTCATTCAAAATTGATCATTTCTCATGTTTGTAAAAAAGTCAAGTC
TGAAAAAGGAAGAATATGCTAAGAATATTTCACCCTCAATTTTTGCAATT
TCTTAAGAATGCTTGACCCTCATCCAAAGTAAAGATTGGTTATGTTTACA
GTTTGTTGTTGTGTAATTTCACAAAACACTCTGCCTGTCATTTTAGCAGA
ATACCTAGATCCATTTTATAAGAACAATAAAAACCTTGAATGTAAAAATT
TAAACAGTTTGAACATTTTGATGTTTGAGCTGCTGAAAAATAAGAATACC
CGAACAAGAAGAATTCATCGCGTTGAGAATAATGAAAAGTGAAATTATTC
TTTCAGGAAATATGGTCGAAAGAGACGATGGGGCGGATGATGAATGGTCC
AGTATAAAAGATGATATGATGCAACCTGATCGTCTCTTAGATGCCAAATC
CAAAGAAAGTCATATCGTTCATTGTCCTTACTATCCAATGGTTGGTATAA
TACTTGTTTTCTTTATAAGCATTCCGCTTATAAGCATATCTTGGCTCTTA
TATGGCAAAAATTTAAGCATAAGCTAAGCATTACCTTGAGCCTATGAAAA
ATTTATTTTCCTGATTTTGGCTGTTTTCAGCTCGGATTTTACGGATTTTT
AGAATTTCCCTCAAATTTTGCTTGATGTGATAAGCATCCTTATAAGTATT
TTTCAGTCTTGTCAAGTCATCGATCTAAGCATCTTCGAGCCTGTTTTCGA
ATTATTGTATGCTTAAGCGAGGTCAATTTAATTGATAATCTAATGGTTAA
AATGAAAAATTGAACATAAAATTCTTAAAGCCTTGCAAAAACTAGCAAAA
TTTTGAAAATTTGGGAGTCTGTGAAGGAATGCAAATAAAAATGTACTATC
AAGATGAATTAGATTTTTATTTCGATTTTTGGAATTTCAGAGTCGGTCGG
GCTTAGCCCGAGCCCCCTTTACAAGTTGTAAAACAATTAATCAAACTGGT
CTCGCCTTATTTAAAAACTTCAGATGAGAAACTTACGTGTTCATTTCGAT
TTTTTAAACTGAATTTAACTGAATCTTTTTCGTTGGATAGGAAAAACACG
AATATTGGTGGGTATACTTGATCAATAAGAAGAATAATCAATTAGTCACA
GCTCCACAGCAAGTCACCAATCTCAAAGTTACTGAAAAGGTTTGTCTACA
CCTTGCAATACTAAGTGCTTCAAATTTATTTTTCGATTGTTTTCCAAACC
CGTTTATTAAATATTTTCATCAGTCAAGAGAAGATCTATAGTTACCTTAT
TTTGGGGGTACTTAGATTTCCTACCCCCTCAACTCCGAACCCCCCGGGAA
GTAGTTAGCACTGGCCTTAAAATACATTATTTAAAGTATCTCCCAAAAGC
AAGGACATGCTAAACGTTGATTTGGTGACTTCGATTTTAAAACTTTGACT
ACTTTTGACTACCCACTGACCAGAACTCGTTTTCTCACCCTTCCTAGGTG
CAATTGAAATTCTCAGCGCCAGAGAAACCAGGCATTTATCAATACATTGT
GGTGGTCAAGTCAGATTCTTATGTTGATTTCGATATGACTAAACCTCTAA
AAGTAAGTACTGTTGAGTCTCTTTAATTTGACTCTCTATTATAACTGGAA
TGTCTCCTTAACTCAAACAAGTTTTCTCATCCCTTCGGATAACAACCTGA
CTGCATAAGTCCATAAAAAAATTGCGTTCCCCGTGCTTGTTCGAGTTATG
GAGACTCCACTTTAGCTCGTTTCTCAAATTTCTTATGTGATTCGGTAATA
AATGCGTTCAACACGAAGACTAATGATATGAACTAATATTTTTAACATTT
GAATATGGAATACGTGCATCGCGTGTATAATACATCTTACAAGTATTTTG
TGTATCTATTTTCATATATTCAAGCCCCTTTCATCATTTTTTAAGATGTC
TTTGAAATGACTGTTGCTTTTGTCACTAGACTTGTTCTAAAAATGATTTC
TTCTACGGACGCTGTTTGGATTGGAACGGGACAGCGTAGATTATTCTATT
CACGATATGTACCATTGTAATGTTTTCTGATATTACATCACGGACCCAAT
TCATGATATGCACCACTGCAATGACTTCATGAAATTATGCAACATTTCTG
TTTTTGTTCCACCTAATACGTCACTTTTTCTATTGTTTGAGTGACGTATT
GGGTGGAAAATTTTAAAAGTTCTCAGAAGACTCTCCAGTGGTGCATATCA
TGAATAGCTGATTGGTTCTAAGTGACGTAAAATCAGTCAATACGTCACTT
TCAACCAGTCAGATGTTTGCTCCGTGAAGACATTGCAATGGTGCATATCA
TGAATATACATTTTGTTCCTTTGCAATTTCCTCAAATGATCCTCACTCCA
TGTCCTGCAAATTGATATGGTGTTTTTCTGTTATTCCCAGGTGGCAGTAT
CAGAAGCGAAAGATTTCGATCCTGGAGAGCATTGGAATTATTCGAGTGAA
GATGACGATAAAGATGATTCCGGTGAAAGCGTTTACGAAACTGAAGAAGA
AGATGATGATGATGACGATGAGGATTAATCACGCCATCAGGGTGGAACGC
CCGTCAAACAACCGCCCGAATAGTCAAAAGTGTCAAGGGCGTCCGAACTT
CAGATCATGGTCTCTCAGACAGATCTTTTTAGACTTGTCCAAGGAAAACT
CGTTCCAAAACAACTTTTCGAAAAAGGTTACCACATGTTTGATTTTTAAA
ACAAATTTCAGACAATTCTAGCTTCTCTTTTATATTGACCACGCCCAAGG
GTTTTTAGTACTTTACTTTCGCACCTCTTAAGCTAAAGTGCCGCTCGTAT
ATTTCCCTCTTTTTAATTATTCAGTACTGAATACAAATAATAAAA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_044372	XLOC_044372	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_60	supercontig	scaffold_60:1465283..1480227 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.174649	0	0	0	0	0	0.722018	0	0.213559	0.0117243	0.667666	0.159961	0	0	0	0	0	0	0	0	0	0	0	0	0	0.199941	0.235301	0	0	0

Blast

[Close]

BLAST of TCONS_00071462 vs. Swiss-Prot (Human)
Match: SEC63 (Translocation protein SEC63 homolog OS=Homo sapiens GN=SEC63 PE=1 SV=2)

HSP 1 Score: 477.633 bits (1228), Expect = 5.430e-154
Identity = 249/545 (45.69%), Postives = 355/545 (65.14%), Query Frame = 2

Query:   32 MAGMKFEYDEKGTTFYYFILSFCAIFLIPTTYYLFPDDSKKKKTEDDINEKRKPCYCPPCMAKQDLIVKKIPKKKIYLIRAVLIILWALLITGVVKVSQFEKEYSEYNPYDILQIEVGATQAEIRKKYRDLSKLNHPDKGGDAVVFMKISKAYQALTDEETKKNWEDYGNPDGPGATQFGIALPSWIVDKKNSMWVLGAYMLAFIIILPIVVGSWWYRSIQYSAEEVLLDTEQLFWYFLHRTPNMSLKRAIMILAGALEFDKSHNAEVQERPSDNVELPQLMRELPQLNEKNKERPLCFAYSIKARALMHAHFSRIALPQQTLLKDLELILKKSPTLVREMINIVGQLMYLAKM--GRVSQPPKLETMENLMKLSQMLIQGVWESKSTFQMLPHISXKLSQMLIQGVWESKSTFQMLPHISQENLRHF-NTKKRKIKTIRQFVGMNNTDRRMLLRTLSDEQYQDVLNVCSSFPHLEIEATTRVIDDEDMETVTVGSTVTALVTLTRKTMEEFFGDESEEVSLNN--IENNDDATASPKPVKGWQR 1651
            MAG +F+YD+ G TF+YF+ SF  + +IP TYYL+P D    +  + I  K        CM  +  ++K  P     + + VL+  WAL +    KVS+ ++EY EYNPY++L ++ GAT AEI+K+YR LS   HPDKGGD V+FM+I+KAY ALTDEE++KNWE++GNPDGP AT FGIALP+WIVD+KNS+ VL  Y LAF++ILP+VVGSWWYRSI+YS +++L+ T Q++ YF+++T NM +KR IM+LAGA EFD  +N +   RP+DN+ +PQL+RE+  +N K  E PL   YS+KAR L+ +H +R+ +P +TL +D + +LKK P L++EM+N++ QL+ +A+    R  + P L ++EN MKLSQM +QG+ + KS               L+Q           LPHI ++NLR   N KK KIKTI+  V +  +DR  LL  L DE+Y++V+ V  SFP++ ++  ++V+DDED   +TVGS VT LV LTR+TM E F  E    +      E+    T   +   GWQ+
Sbjct:    1 MAGQQFQYDDSGNTFFYFLTSFVGLIVIPATYYLWPRD----QNAEQIRLKNIRKVYGRCMWYRLRLLKPQPNIIPTVKKIVLLAGWALFLFLAYKVSKTDREYQEYNPYEVLNLDPGATVAEIKKQYRLLSLKYHPDKGGDEVMFMRIAKAYAALTDEESRKNWEEFGNPDGPQATSFGIALPAWIVDQKNSILVLLVYGLAFMVILPVVVGSWWYRSIRYSGDQILIRTTQIYTYFVYKTRNMDMKRLIMVLAGASEFDPQYNKDATSRPTDNILIPQLIREIGSINLKKNEPPLTCPYSLKARVLLLSHLARMKIP-ETLEEDQQFMLKKCPALLQEMVNVICQLIVMARNREEREFRAPTLASLENCMKLSQMAVQGLQQFKSP--------------LLQ-----------LPHIEEDNLRRVSNHKKYKIKTIQDLVSLKESDRHTLLHFLEDEKYEEVMAVLGSFPYVTMDIKSQVLDDEDSNNITVGSLVTVLVKLTRQTMAEVFEKEQSICAAEEQPAEDGQGETNKNRTKGGWQQ 515

HSP 2 Score: 110.153 bits (274), Expect = 1.767e-24
Identity = 55/116 (47.41%), Postives = 78/116 (67.24%), Query Frame = 3

Query: 2127 RDDGADDEWSSIKDDMMQPDR-LLDAKSKESHIVHCPYYPMEKHEYWWVYLINKKNNQLVTAPQQVTNLKVTEKVQLKFSAPEKPGIYQYIVVVKSDSYVDFDMTKPLKVAVSEAK 2471
            +DD A  EW  ++  + + +R LL+ KSK +H V+  Y+P EK E+WW+Y+ ++K   L++ P  V  LK TE+V+LKF AP KPG YQY V ++SDSY+  D  KPLK+ V EAK
Sbjct:  607 KDDEA--EWQELQQSIQRKERALLETKSKITHPVYSLYFPEEKQEWWWLYIADRKEQTLISMPYHVCTLKDTEEVELKFPAPGKPGNYQYTVFLRSDSYMGLDQIKPLKLEVHEAK 720

The following BLAST results are available for this feature:

BLAST of TCONS_00071462 vs. Swiss-Prot (Human)

BLAST of TCONS_00071462 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
SEC63	5.430e-154	45.69	Translocation protein SEC63 homolog OS=Homo sapien...	[more]

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TCONS_00071462 (transcript) - C. hemisphaerica