TCONS_00071431 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071431
Unique NameTCONS_00071431
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2326

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071431 ID=TCONS_00071431|Name=TCONS_00071431|organism=Clytia hemisphaerica|type=transcript|length=2326bp
CAAGCAGTCAAAGAATAGTTCCTCATTTCCGTCAAATCTCTTTGCTAGCT
CCTTGTTTTTCCTTTGGTTAGCTCCAGGAACGCTTTAATTCTATAAGATT
TTAATGATAAAGCTGTCAGTATATGTTGTTTTTATGCTATCGTTTTTTCT
TGACGAAAAGGGGCTTGGAACCGAGCTTGGTGAATACCGGAGGAGTGAAA
TATAAAAAAGCTAAACCAAGTGCAAAAGTATTCAAACACCGAGAAGACAA
AGAGGAGACAAGTTATCAGTTGGAAAGGCAGAATGAAAATTGTGTTCATT
TTTGCTGCGTTTACAAcattgGCATTGTGTCAGAAGGATGGTAACAGCCA
TGATGATATTCTGACAATCAATCAAAAAATGTTCCAGAAAGCTGCTAAAG
gAACAAGTGGATTTTCGGGCAACAAACAAGTCTACAAAGAGGAAGATCTA
CTTGAAGGGGACATTGTTTTGACACCaaaattaaggaaatatttggATAA
CCAAAGAGACGGCAAAGAAGTTACAGCTTTTGATGCAGCCGTTTCAAAAG
CTTGGTCTGGCGCACGAATTCCATACACCTTCGCTAGAGGATTTTCATAC
ACGTCTGCTGTTAGCCAAGCCATCACAGAATACAACGCCAAAACCTGTAT
TCGTTTTGTACCAAGAAGATCTGAGAGAAATTATGTCGAATTCTTTCATG
GCGGCGGTTGTTATTCTATGATTGGACGCATCGGTGGTAAACAAAGAATT
TCATTGGGTAATGGATGTGGAACCAAAGGCGTCGCTATTCATGAAATGAT
GCATGCTTTAGGATTTTTCCACGAACAAAGTAGGAGAGATCGTGATTCAT
ACATTCAAATTATGTGGCAAAACATCCCCGGACGTGTCAGATACAATTTC
GAAAAATACAAACACGGACAAGCTGAAACTTTGGGACAACCCTATGATAA
GAAATCTGTTATGCATTATGGAAACTATGCCTTTTCAACGAACCGACAAA
AAACAATTGTTTCAAGATCTAACCGTAATGAAGTTTTGGGACAACGACGT
GGCTTGAGTACCATCGATGTCCGACAGTTAAAGACGATGTACAAATGTGG
TGGTACCAAACCTGTACGACCAACAACAAGACCAACAACAAGACCAACTA
CTGGAGACTGCAAAGACAAATACAGCCTTTGCTCAACATTGGCCGGACAA
GGATTCTGTCGCGTCACTTTTACGTCATGGATGAAAAACAACTGCAAGAA
ATCTTGCAAGAAATGTCCAACTAAGCCTTCATTACCGAGATGTAAACCAC
ACAAGAATTCAAGACATTGTGGAAGTTGGCAAAAATCAGGTTTTTGCAGT
GGGCGATATGCAAATTTCATGGGAAACCACTGTTATCAGTGCAAGAAATG
TCGAAGATAATGCAATCCGTCCATTGAAAATGTACCTTACAACAATATGT
CCATTAAACACTATTCTGATGTTCTGggcattgggcttttccagaaatag
tccgtgccccctgttgaggatattggatatccagggggctaacgattttt
gttcaaaagtggatatccaggaggTTAAATATCTAAAAGGGAGAGAATAC
CCAGGGGGTAAactgtcttttcaagtaaaaaatatgatatccaggggtaa
acatctgtataagagaggatatccagggtgttaagcatatttttaagagt
ggatatccagggggtctttactaataaagtaggatatccagggggttcga
aacttcgaaaaatcaatatccttaACAGTGGGAGTAaattctggaaaagc
ccatcaGATGGATGTAATCTTGACCTTGATTTCAAAGGTTACATAAAATG
TCATCCTGTAAAATACCTTTAGTCTATTTTAGTGTTTCTTTTgtaatatt
tgtattttttttcggGAATTAATTAATTTAGGGTGCTTGCGGTGAGTGCA
AATGAATTGTTGCCGACAAATTTCGAGTGAAAAATTTGGCTCTCTTCGAC
TAATTAGCACACATTAGAGCAGTTGTTGGAGATGTTTTATTTTGGTCTAA
ATAATAAATCTTATATCGTCactaaatttagaattttttaaaaagttata
tGAATTTATACGATTAAATATTATATTGACCACCAGACGTAAAAAGGTGA
TTCAAATAAATGAGGAATAAATATTTTGCACTCTATAGACCTTGTTTACG
ATTTCATGCCTCTTGATCGTAATTTGATCACATACTATCCAATAACCTAG
ACAGACATTGGAATTATGAAATGTTTATCCAAGTTTGACTTAACGCTTTT
AAATGAATATACCCAGGTTATGATTG
Run BLAST on NCBI

transcript from alignment at scaffold_60:1359972..1375134-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071431 ID=TCONS_00071431|Name=TCONS_00071431|organism=Clytia hemisphaerica|type=transcript|length=15163bp|location=Sequence derived from alignment at scaffold_60:1359972..1375134- (Clytia hemisphaerica)
CAAGCAGTCAAAGAATAGTTCCTCATTTCCGTCAAATCTCTTTGCTAGCT
CCTTGTTTTTCCTTTGGTTAGCTCCAGGAACGCTTTAATTCTATAAGATT
TTAATGATAAAGCTGTCAGTATATGTTGTTTTTATGCTATCGTTTTTTCT
TGACGAAAAGGGGCTTGGAACCGAGCTTGGTGAATACCGGAGGAGTGAAA
TATAAAAAAGCTAAACCAAGTGCAAAAGTATTCAAACACCGAGAAGACAA
AGAGGAGACAAGTTATCAGTTGGAAAGGCAGAATGAAAATTGTGTTCATT
TTTGCTGCGTTTACAAGTAAGTAAAGCTAAGTAATTTATTTAATAAATCG
ATAAAGCATAGGGAAAACTTTGTTCAATTCAAATGGAGTCGTTCAAGAGT
GATCTGAGTCATGTGATCTTTTTTCCGGATACACGCGTTGAAAAAGCGAA
CACAAGAAGTCAAGAAAATTTTGAGTTATAAAGAGTAAGCTTTTTAACCC
ATTTTTAACTGGAAGGGACTATCAAGTTAAAGAGACCCTACTATATATGT
GTTCATTACAACTCCGAATTTCTTGGGTACTTCAATATATTTGTTACAAT
TTCTTTTTCATTTCAACATTTTTGAAGAAATTAATTATTGATTATTTTTT
TTCAAGCATTGGCATTGTGTCAGAAGGATGGTAACAGCCATGATGATATT
CTGACAATCAATCAAAAAATGTTCCAGAAAGCTGCTAAAGGTACGGGGGT
AATAGGGTACTAGGCGAGCTGACGATAGGTATGTGCTTCCCAACTTTCGA
CCCTTGGACCCTTAGCTGGACTAAAAAGGAGGAAAAAAGGAACATTTTTT
GAGTTTTACGGCACCCTTTTTGGGACTAATTTGACCTAATTGATCAAATT
TCGATCTTTCAAGGGGCACAAAGATGAAATATTTTTTCCCACCCTTGGTT
TTTTGATTTTTTCAACCCCTACCTTACAGGCACTTAAAGGATCCAAAAAG
GCACCCTTAAGTGCGACACAAACCCGTACCCTTCTCTCACTTACCTAGGT
ACCCACTCCCGGGGTTGTAAAACATGAGATACAGATAGAGGATGAACCTC
AGATAGAAACATGCAAACTCAGATACAAAAAAGTTTTTAAAAAGCAACAG
ATTTAAGAATGTTTGTAGACTCCTTTTGAACTTACTTTTGACGAAAGAAA
CAAAAGAATCCATTGTTCGATTGTGTTTGGAAGTCAGTGCCTAACTGTAC
ACTACAAGTTTATTTGAATGGATTGTTTTTCTTTTGTTAGGAACAAGTGG
ATTTTCGGGCAACAAACAAGTCTACAAAGGTAACTCAAGGAGATCAATTT
TTATTTTCGGTTGTATTTTAATATTGGGACAAAATGACTTTTTTTTATCT
GTCCTCGATCTCTTTAAAAACAAGTTTAGCAATAGATTTTCAGTAAAAGA
GAGGCGCAAAATAGCCTTAGATAAAAGGGAAACAGAAAGAAACAAGACGA
CTTGAAGTCGAAAATTTCGCCTAGAATTTGAACTGCATGGGAAAAACAAT
AAGTAGAGATTGAAGCTAATCTGAAATCTACTTTACATCGAGCCTTGATG
AAACAATTTTACAAGAACAACGAGGCTTAAGATCGCTAAAAAAATTAAGA
CCGATTTAAGAAGAATTGTTGCTTAATTTTTAAAAGAACTCTTATAAAGT
ATATGCTTATAAAAGATAAATATGCTCATATTGCACGCCATCCCTTGTTT
ATTTTGTAAGAACTAATTACGGAAAGGTATATTACCGTCTATCCAAGAGT
TATTGATTTGATTCTTATAAAGTAAATGCTTATAAGAAAATGAATATGGT
CATATTGTGCGCCGTCCCTTGTTTACTTTGTAAGAACTAATTACCGAAAG
GTATGTCACCGTCTATCAAGAGTTATTGATTTGATTCTTATAAAGTAAAT
GCTTATAAGAAAATGAATATGGTCATATTGTGCGCCGTCCCTTGTTTACT
TTGTAAGAACTAATTACCGAAAGGTATGTCACCGTCTATCAAGAGTTATT
GATTTGATTCTTATAAAGTATATGCTTATAAGAAAAATAAATATGCTCAT
ATTGTGCGCCATCCCTTGTTTATTTTGTAAGAACTAATTACCGAAAGGTA
TATCACCGTCTATCAAGAGTTATTGATTTGATTCTTATAAAGCGAATGCT
TACAAGAAAAATGAATATGGTCATATTGTGCGCCGTCCCTTGTTTACTTT
GTAAGAACTTATTACCGAAAGGTATGTCACCATCTATCAAGAGTTATTGA
TTTGATTCTTTTAAAGTATATGCTTATAAGAAAAATAAATATGCTCATAT
TGTGCACCGTCCTTTGTTTAATTTGTAAGAACTAATTACCGAAAGGTATA
TCACCGTCTATCAAGAGTTATTGATTTGATTCTTATAAAGTATATGCTTA
TAAAAAATAAATATGCTCATTTTGTGCGTCATCCCTTGTTTACTTTGAAG
AACTAATTACCGAAAGGTATATCACCGTCTATCAAGAGTTATTATGGTTT
GAATCTTATAAAGTATATGCTTATAAGAAAATAAAGAAAAAATCAAAACT
GTGAAGCTAAAGACACAAAGATATATGACGTAATCCAAAGAAAACCCGCG
AAAATTGTCCGTGGTTATACGAGCATGTAATTTGTAAATTAAATTTAGTG
AGTTCCTCCATCGTATCAAGTACTTTCGTTTTCTAATTTTTTTTCCGATG
ACACCAACACCGCGAAAGGCTATCGTAATACTTTCGCTAGGCGAAATTAA
CAAGGGGAAACTCTTTCGTGAATTGGTGGTTTTGTAGAATATACTCCAGG
CATCTTTCACATATTTTACAGAGGAAGATCTACTTGAAGGGGACATTGTT
TTGACACCAAAATTAAGGAAATATTTGGATAACCAAAGAGACGGCAAAGA
AGTTACAGCTTTTGATGCAGCCGTTTCAAAAGCTTGGTCTGGCGCACGAA
TTCCATACACCTTCGCTAGAGGATTTTGTAAGTTGTTCTTCCTTCTTCTC
AATTTGCACGTGAGTATGATTTAATCAGCATTGCTAACGTTTGTCTACCA
ATTGGTCCCACCATAGTATAAGAAAGCCGCGGCTGGAATGATAACATCTG
AATTTCTGTTGTTCTATCTCTGTCGTATTTGATGACTATTTGTTGATCAA
GAAATAAGTAATGTAGCATCTTTAATGGTAAATTTTATTGGTTTGTCGTC
AATACTTATTTCTCACTGCGTTTTAGACATTAATGGTATGCCCTTGTTAA
TACACTTGCACTATGAAATCATTGTAAAGGAAAGATCAACAATAAGAAAT
TTAAACAAGCACAAAATGACTGTACTGAAAGAACAAAAAATTAATAAAGT
GCCTCGAAATGCCTTCACAATATTTCAGTGAAATCTTTTTAGAAATCAAT
GAAATAGTACATCAAGATAATACTGTGAAAATTTCAAGCCAGCACCTTCA
AAATTTATCATTCAAACTGACAGGAAAGTTGTGATCGTGAATATATTTCT
TATAATTTTAATTTTGGCGAAAGACTATCGTTTCCACAAAATACCCCTAA
AATATGTCTAAAATCAGTTCAAGTTTTCTATTGGGTACAGATTCAAAAAT
ATCTAGCAATAAAAAACCTTTTGTGAAGGAAAATAAGAAAAAATTTCAAA
AACTATCTACCAATAATAAACTGACAATCTTGATGTTCTTATAAAGCTCG
GAGACAGAGATAGAACAGCAATTAACTGAAAAGACAATGCAGTACATATT
CCAGCCGCGGCTTTCTTATACTATGGTCCCACTTTCTGATGAAAACAATA
GACGATATCGGCTTAACGTGAAAACTCAGATTTGACCCCCGAATATTGCC
CACAATGCTTTGCGCGCAAAAAAGTTCACGATGGAGTTTTCATGTGAAGC
CGATATCGTCTATTATGAACTTTTGAAATAAAAGTTGAAGACTAATGATG
GCTGTGTCACTGGCTGTTTTAAGACAATAGAGCAAGTACGTCGGAAACAT
GCGAACGAGTGCAACGCTCGTTTAAAAACAATGAAATTACAATTACAAAT
CTCTTCATCTGATAAGTTCGACAGGGTTTAAAACCGCCTTTGCTGAGTGA
CTAGATTAAGTTTGATCATTAATCCCACGAATCCCGTTTTAGCATACACG
TCTGCTGTTAGCCAAGCCATCACAGAATACAACGCCAAAACCTGTATTCG
TTTTGTACCAAGAAGATCTGAGAGAAATTATGTCGAATTCTTTCATGGCG
GCGGGTAAGCATGATTAAAGCGGTTTTTAATATTTCCCTTCAACCTGGAT
ATTGGGTATTCAGGCAGGAGAGAATCTCAGATTAACTTTCTTTTTGAGGA
AATCGAAATGGAAAATTTTGTACTATTTTTTAGTTGTTATTCTATGATTG
GACGCATCGGTGGTAAACAAAGAATTTCATTGGGTAATGGATGTGGAACC
AAAGGTGTCGCTATTCATGAAATGATGCATGCTTTAGGTAGGAAAATTTG
GGTTTGAAATTTTGAAAATTTTAGATTAAAATATTAAATCAATGGACACA
AAAGTGGTTTCAAATCCCTTCAATAATATCAGTTTAACGTTGAACAGCTG
GGGAGGCAAAACACCCTCACTACAGCAGGTTCATAAAAGAATTTGCATTT
TTATTAAAAATATATTTCTAGGGTTCTTTCACGAACAAAGCAGAAGAGAT
CGTGATACATACATTCAAATTATGTGGCAAAACATCCCTGGACGTAAGTT
ATAGCTATAACGATTCTGAATATTCGACACGACTCTGTCTCAACGTCTCG
ATTTGATGAGAACATTTTCGCGAGGAGCGAAAGAGCGATGGGAATGAGAA
CCAACTACACGTTTGTTTTAAAGAACATCCAAAATTTTTGCAGCCTTCGG
ATGTTCTTAACTATTTGAGTTTAAAGCCTAAAAATGTTCTTAACGTGTTC
TTATTATGACCATTTTGTGAGTATTTTTGACCATTTTCCTAAGAAATTGG
TTCATTTTGAGTCCACAAAGCCTTAAAATGTTTTCAGCTTGCTCTTAACA
TTTTGGCCATCAAAGTCTTATGTTCTTATATAGTTTGTTCTTATGAAGAA
AAAAACGTACCTCACCCAATCGCAATTATGGTAGGTGTGGGTTTTCGGAT
GGCAATCTTAAAGAGATACTTCTTACNAGTACCTCTCCCAATGGCAATTA
TGGTAGGTGTAGGTTTTCAGATGGATGTGCAATCTTAAAGAGATACTTCT
TACCAAGGACAGCTGTAGTAAATTTTTGTGGGTAGGGGCCAAATAACGGA
TGTGTGATACAAGTGAGTTTTGACTTGTTACATTAGAAGACAATAACATA
CATAAGTTGAAATGGCGACTACAAGAGAGGGATATCTGAAAATTTTATTC
TAGCCTCTGGGTTATGAATTTAGCTGGTGTATCTGCCAATAGACTTGAAT
TTTTTTGCGCAATGCATCATGGGTAATCATTCGGGGAGAATTCGGTAAAG
TCGATATCGTCTATTGCCAAACATCTCTTTTCTAAGAACTGGTCATTACA
AGACAGTCACTTCATGCCATTGTACCAATCAGATTAAAATTTTACTTTCA
ATATTTTGTTATTAGGTGTCAGATACAACTTTGAGAAATACAGACATGGG
GAAGCACAGACTTTGGGACAGCCTTATGATAAGAGATCTGTGATGCATTA
TGGGAAGTGAGTAATAAAATTAGCCTTATTGTTTGTTTCCTGTCTCAGAA
ACGGATATTGGTGAAAATGGACTTGCCATTTCTATATGAGACCATGTTCG
CACGTGACGGTTCCGTTTTGCTCCGAAACGAAATGAAGCCATTCTATTGG
TTACATTCAAGTGATACGTCACTTCTAACCAATAGGATGGCTTCATTCTG
TTTCGGAGCGAAACGAAACAGTCATGTTCAAACATGGTCTAATATATTGA
CCGATTGGTTCGGTCGCTTTGATGAATTTTTTATAAAGACTTATAATTTG
CCAGTCACAAAAGTTACTTCTATCTTACTCTCTCAAGATTTTTCAAATTT
AAAATTTTTACTCTGTTTCAGCTACGCCTTTTCAACAAACCGACAAAAAA
CAATTGTTTCGAAATCTAACCCAAATGAAGTTTTGGGACAACGACAAGGC
TTGAGTGTCATCGATATCCGACAGTTAAAGACGATGTACAAATGTGGCGG
TACCAAACCCGTCGTAACTCAAAGACCTACTACCACTAGTATGATGATTT
TTGATAGCACAACATTGTGTCAGATTTTTTCCATGTTTCTGTCTTTGTTC
CTATTTTGTCCACTCTAACCTGAGGATTGTTCTTGATTCATTTATTAGGC
GGTTTATAAGTCTCATTGTTATCCTTGTAACGTTGTTTTGATACACCCCT
GTCTCACAGCCCCGCTGGAACTTTTTTCCTCAGTGGGGATAACAATTCCA
ATTGAAATCCCAATGGGGATAAAAATTCTATTGTTCCAAGTTTAAAAAAC
CCAGTGGCGATGGTTTTAGAGTGCAATTTTTAAACATGGAATTTCGAGTG
GGGACGACATCAAATTCAATTTCCCAGTGGGGCTGAAATTCAAGAGTATT
TTCCCACTGGGGACGAAATTTTTGCTTAATTTTCCAGTGGGGCTGGGGTC
CCAACAGGTCAGTGACACAGGGGTGTTTTGATAAACAAGAATATGAACTT
AGATGAACAAAGGATAAGGTCCACAATTTCTAGAGCTTTCAATTACAACG
CAGATTATTTCTCTAAAATCTTTCAGACTGTAAAGACAGATACAGCATGT
GTACAACATTGGCAAGAGAAGGATTTTGTCGCGTCACTTTTACGTCATGG
ATGAAAAACAACTGCAAGAAATCGTGCAAGAAATGTCCAACAGAACCAGT
AAAACCTTCATTACCGAGATGTAAGCCACACAAGAATTCCAGATACTGTG
CAAGTTGGGTACGTTCAGGCTATTGCACCAATCGTCGGTATGCCAGCTTC
ATGACAGGCCACTGCTCTTCTTGTAAAAAGTGTATTTAGGTCAAGACCAC
CAAAGACTTTTAGTCTTCAAGGTTATATGTATAATTGATAAATATATATT
TTTGTGACATTTGATTGATCTAATTATTTTTTGTCTTTTGATTAAAAATT
GAAATATAAATTGTCGAAAATGAATTATTTGATCTGATCCAAACTCCCGT
AAAAATTAGCGGTGCCTGAATATCTTCTAGTTCGCTGAATTCCATGCTAG
TCTTACAAGGTCGTTTATTTTTCACAATAAAAATAACTTCCCTTGTTTTT
TTTGCGGTGGAAATCCTTTGACGTATTGTTAAATCGCAAATTTTTACCCT
TGCTATAAATATAAATATATCGTTTGCAAGATATAACATATTTACTCATA
GCAATTGTAATGGTCTTCAAATTGGAGATAAGGACCAAAGTAATGTGCAT
GATTTTCACGTACAGATTTATATGGTACTATACTTATGGATATCTTTCCA
AAATCCGTCTGATTGGTCAATTTTGAAATTATGATGACATTATACCTAAT
CGACCAATCAGTGTTCAGAAAAATGATTTGAATGTTAAACGAACTTTTGG
AAAAAAGTTAATTACAGTAAGCAAGTAAATTCGGGCATTACCTAGACATC
GTTGACCTCCCACAGATCTAGGACTATAAGTATAAACTAATCCTATCCAA
CTTGATTTATTTTTCGACTAAAACAATGTGTTCTTCCTATGCTAGATGGC
CTACGAGGTAGTCTTTGATTTAAGTCGAAAAACTTGCGGAGCCGTTTACC
AACAACTTAGCAGCAACATATTTAATCTCCGAGCATAGCCTGATAATTCT
AAACACGGAACAAATTCACTCCGAAGCTCATAACTCGGCGTTCGCCGTAT
CCCCCAAGAGCGGTGGTGCTACTGATGATATGGTTGTGTGAGATCACAAG
ATATAGGTTTTACCTAGATATACACTTCGTAGCTTTGAAAAATCTATCGT
CTACACAAGGGAACTAGGTCACTAAAAAAGGGAAAAAGTCCGAAGGCATG
TAAGCCGGGGTGAAATATAAACAGTAATTGCGCTTTATTCACGACTTTAA
ACTCCGCGTTTATATATTTTCCCGAGTTCCAATAACTCTAACGGACGATA
ACATCGTATATCGTATATCTTTAAAAGTAACGTGTGCAAACAACGTCAAA
TGAAATTTGAGAATCTAACTATTCCTTATAGCTTCAATCACGTAAAGAAA
CACCCTCAAATAAAAATTATAACAGAAATGATTGACGTCATTTTCACAAC
CACAAAATGAAAGATGACCCATCATCACCCTAAAAAAAGGCCTAAGGGCA
AGTGTATATAAGAAAAAAAGTGTCTAATTTTCGATCAGAGTAAAATTTCA
AAGGGTGGAGCAAACGATCGGAGAAAATGAAATCGATTTTTCTTCTATTT
GCAGCTTACGGTATGAATTTCTTCTTTTTCAGAATATTTGTTGCTTAGCC
AACTTGAAGGTGAGTCCGTGATAGAAATTTGGGTTCCACGGCCAATTTTT
CCGATTTCGCACCGTTTTTGTGCTTTTAGGGGGGGGGGATCGTCATCTGA
ATTTTGCCACCGCTCAAAATAGTGGCTTCATCTATCTTCTTTAAGGAATT
CAATCTCAGCATTGTTTTACCATAATATACTTTTTCGTTCAGTCATGGTA
AGCTGCAAGAAAGATGGTAATAGTCATGATGACATTTTCGATATCAATCA
GAAAATGTTCAAAAGAGCAGAATCAAGTAAGTTTTTAAACATTTGTTTCT
CAGGCGTTTTCATTTTCCAAGCCTTTTATAAAACTCTTTTACTTATGACT
GAACTCGCAATTAACGATGTTCGATAGCAGCACCCTGTTTTTTTAATCAT
ATCACGATCACGAAATTTGTCCATCGCCCAAAAATAGCGAAAGATTTTAA
TTTAAGTATCACGCAAAAATTTTGATCACACCGAAAAGAAATTTGGAACC
ACTCAATCATACAAGAACAAAGCCCCAATCACACCATAATCATGTAAATT
TTTGAGGCTGTCTCCTTAACCCACATGTTACCCAATTTAAATACTTACTT
AAAAAATTTATCATATCTTCATCCATGATTTTGACCGCTTCCTTATAGAG
CCTCGATTTACCATCAGATTTATCATCAGATATATTTCTAATTTTTACAA
TCGGTTGGCTGTACTGACTTTATGCAGCATGCTACCATACACACCCCTGT
CTCACAGCCCCGGTGGAACTTTTTTCCTCAGTGGGGATAAAAATTCATAT
TGAAATCCCAATGGGGATTGTTCAAAGGTTAAAAAATCCAGCCGGGATGG
TTTTGGAGTTGAATTTTTAAACATTTATTTCGAGTGGGGATGAAATATAA
CTCAATTCCCAGTAGGGCTAAAATTCCAGGGTATTTTCCTACCAGAGACA
AAACTTTTGCCAGATTTTTCAGTATGGCTGGGGTCCCAGTGGGTCTGTGA
CACAGGGGTGTCATACGAATAATGCGTTGGATATCAGAACATAATCCTTC
TTATTCGCCTTTCTTTGTTACAGAAACAAGCTCATTTTCTGGTTCAAAAG
GAAGCAACTACAAAGGTGAAGACCGATTTAATTTTAGACTAAGTTACCCA
TTTTTCCCTCTTTTCTTCTCTTTTTTTCTCTTTGTAATGAATATTTTTAG
TTCCCACTAATTGCGGATTAAATTTCATTAATTACATGATACAATATTGA
ATAGGGTGACTTTTGGCGGTTTGTTTCTCAAGGGTACTTTCAGTTTTACA
TTAAGTTTTATTCGACATTCTTATAGCACTCACATACACATTGCCTCAAA
ATAACTGCTCTTATGACCATAGTATTTATTGGCCTATGGGCACGCAACGT
CTTATCGACATCCCATGGACGGCTTTAAGACCTTTGGACGTCCTAGAAAC
GTACATTAGACGTCCAAAAGACGTTTGTGCCCATTGTGATTCCTGAAAAA
GAAGCTTGATTGGTAATTTGTGAAATCTTAGATCAATTCATTTTCTTTTT
GTTCCTCAGCGGATGACATGCTTGAAGGGGACATTATTCTAACTCCAAAG
CTAAAAAAATACTTGAACGACCAGAGAGACGGAAAAGCTATCAGCCCCTT
TGATGCTGCTGTCAGCAAAGCGTGGCCTAAGGCTCGCGTGCCGTACACTT
TCGCCAGAGGCTTTTGTAAGTCAATTTCATTTGTTGATTTCAATTTTTTA
AGTTCTGTTTTGTAATCAAAGTAACAAGAGAGACAAATACGAAAAAGAAT
TTAGAATGACGGATGCAAAAATGCAGATTCAGGTCTCAAAATTATTCCTT
GATTATAATATCTCCTCGCCGAATAGTTTTGTTATTTTGTATTTCACTTT
CAGCATACACGTCTGCTGTTAGGCAAGCCATCGCAGAATACAACGCCAAA
ACCTGTATTCGTTTTGTACCAAGAAGATCTTCTGATCGAAGCTACGTTGA
ATTCTTTCACGGTGGCGGGTATGTGAAGTATTTTTACGCTTTTCTTATGA
CATCTTCAATGTTAAAAGTCTAGTACCGTCTGCGTCTCGGTTCATTTCAT
GTAAAACAATCCAGGGGGCAGTGGGTTTACCAACTGATGGTATGTGCGGC
GAAAAGAATGGATTTTAGAATCGCACCTTTACAGTGCAGAAAAAAATCGG
TGAAATTCATACCCTTACAGTGCATTTTTTCAAATTTTAAACTCTTTGAG
AGCAAAAAAATCAAGATTTTCCAGCAAAAGTTAGCAATTTTTCCTAGATT
TGCTGAAATTTCTACCCATACAGTGCAATAGTGCAATTATCAAAAGTCCA
CCCTTACAATGCATTTCTGATACTTTGAAGAACATACCCTTAACTGCTGC
ACATACCCGTCGGTCAATTTGCCTGACTGCCCCCTCCCCCCCCCCCCCCC
CCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCCCCCCCCCCCCCCCCCCC
CCGGGAAAACATTTTGCAAAACTATTATAACCTCCAGAACGTCGATTTTC
CTCTAATCCAAACTTTCAGTATCCAAATTACTCTGTAAGTCGTACTAAAA
GTTAAATCCTTGATTGGAGTTCTTCTCTAAGATAAAGTTACGTTGAGTTA
GAGAGAAGTAAGGTCAACTGAAGTATCTCACACTATAATAATAATAATGT
CTTTTGATTCACAGTAATGACTTTTGAATCACCATAGCATTTCAAGAAAT
CGATTTTAACAAAGAATTTCTATCTTTAGTTGTTATTCTTACATTGGACG
TGTCGGTGGAAAACAAAAAATTTCATTGGGTAACGGATGTGGAACCAAAG
GCGTCGCTATTCATGAAATGATGCATGCTTTAGGTGAGGAAGGTTTACTC
GGTACCTAATAAGCGGGGGGTTTTGAATAAGCGGGGTGATTGGAAAAATT
ATAAGCGGGGTGGGGGTTGGAATAAAAATGTCATTGGTGGGAATTTTTTG
AATTAGGGCAAGACCATGGGAGTTGGAATAAGACTTGGAATAACAGTGTA
AATCTTTGAAAAATCAATTAGCGGGGGAGGGGACGCTTATTAGGTAGCCG
AGAGTAAGTCTTATTCCAATGATACATTTCACATTTCTATCGTATAAGCC
AGTCATCATTTTTAATACAGTTTGTGGATCTTTGATCAATGAAGGGATAA
TTAACCGATTCGAAAAACGTCCAAGATGTCCAAAATAATAAGCCAAAATT
TTCCCAGCTTGGACTGGTGATTTACCCCGCCCTCGTTTTCTCCCCTGTTA
CGGTCCTTCAAAAGTTCAAACCATAATTTCATATGACTGTGGTGTCTATG
CTGCGTCTTATCCCCTTCGTCTAGAACTTGAAACAGAGTGGTTTTAAGTA
TAGAACTGGCTCTATAATGTTGACTTACTTGTTATCTTTTCCAGGATTTT
TCCACGAACAAAGTAGGAGAGATCGTGATTCATACATTCAAATTATGTGG
CAAAACATCCCCGGACGTAAGTTTGTTTTACAGTGGTGTCTCCATAACTC
GAACACGCATGGGAAACTCGAATTTGTTCGAGTTAAGGGAATTTCGAGTT
ACGGAGTAAGGTTGATAAAAAATCAGTAACTGAAGGGACAGGAAAACTTG
TTCGAGTTAAAGAGACTTTATTGTATTTATATTATATTATTATGTCACTA
AAATAACTATACTACTATACCTAGGTTGATTTCTATAATAACATTTGACT
TTACTTCAGGTGTCAGATACAATTTCGAAAAATACAAACACGGACAAGCT
GAAACTTTGGGACAACCCTATGATAAGAAATCTGTTATGCATTATGGAAA
GTAAGTTATAAATCATTACATGTTACGTGTTGTTATTACATTAACATTCT
ATTGAATGTTTAGATACCATTGTATATTACCCCTGTCTCAATTTACTTTT
GACTCACCGTTGGCGTTGATGAATAAAATCCTATTGTAAAATTGTGACGA
TTTACTGGCCTTGCTAAGTACGAATAAAACACAGGGTTAGCAAAAGTTTC
TTAAGTCTCTTACTTTGTTCAACCAAATTCTCTGTTCTCCAAATTACAAG
TCCCCAACTCTGCATAAATAAGTTTTAGTTTATCGACCCAATGATATTCA
TATTGGAAGTTTATCGTAGCTTGGATCACGATATTTACGTTTGGCTACGT
TTAGAGAGATTCCTCTCCCTATATTACATCCTTTCAATCACACTTTGAGA
TCTTTTACTTAAGACTTTCAACTCTCTGCGTTTCAGCTATGCCTTTTCAA
CGAACCGACAAAAAACAATTGTTTCAAGATCTAACCGTAATGAAGTTTTG
GGACAACGACGTGGCTTGAGTACCATCGATGTCCGACAGTTAAAGACGAT
GTACAAATGTGGTGGTACCAAACCTGTACGACCAACAACAAGACCAACAA
CAAGACCAACTACTGGAGGTTAGTATTTCCCCAACTGACACTAAAATTGT
TTAAAAACGTCCGAAACGTCCGAAACGTTTATACGGACATGTATTTAAAT
ACAAAATCCCTGTCTCAGTGATTTGGTAAAAGTTCTTTTAGCCAGGGGGA
TAAAATGACGATATAACTATAAAATTATGAAATTACATCTCGAAATAGAT
GTAAAATCACCTGTTCGCTGCCGACTAAAAATTTTGGTGTCTAAAGCTCA
GATATTCAGGAAGGATTTTGATTTTCTGAATGAGGATGAGAGTTCAGTGA
GAGTTGAAATGGGGACAAAATTTCTTGCCGAGCGACTATTTTTCAGCTAA
ATTTTCTAGTATTCCTGTCTCTGTGAGGAGGGACTGCGATACGGGAGTGT
CTGATAAATGATAAAATCATGTCAATATTATGGTTTAAACCTTTACTAAA
GTATTACCTTAATGAACACGTATTACCTACACCCAGCCAAAAAACCGTAA
AAGTAGGGTGGCTGAAGGCTCAAAATGTGATAAATCCGCTAGGAATAGAC
CTTTTCATAAATTACGTCACAAACATCACTTACCTCGTATTCAAACAATT
ACCATAGTGATTATGTCCCTTGAGACATTAAATGATTTTTTTTATGAACT
GAAAATAGTTTTAATAAAATCCCCTGGGAGTCAATCGCCAAAACAATAAT
TTCAAAACGAGGCAAGTGATGTTCGTAACGTAATTTATGAAAAGGTCTAT
TTGAGAAAAAAATCTCATTTGCTCAAAAGTCGGGAGGCTGAAGTCTCCCC
AGTCCCCCCGTTTCCGCACTCAACCCACTCATTCCGTGGATTCCAGTGTA
CACAATTAAATAAATGTCCTAAATAAATGGACTATAAATAAAACGTCAAC
CCTGTCTTTCCATTGTAAACACTTTACTCTTGTTTTATTCTAGACTGCAA
AGACAAATACAGCCTTTGCTCAACATTGGCCGGACAAGGATTCTGTCGCG
TCACTTTTACGTCATGGATGAAAAACAACTGCAAGAAATCTTGCAAGAAA
TGTCCAACTAAGCCTTCATTACCGAGATGTAAACCACACAAGAATTCAAG
ACATTGTGGAAGTTGGCAAAAATCAGGTTTTTGCAGTGGGCGATATGCAA
ATTTCATGGGAAACCACTGTTATCAGTGCAAGAAATGTCGAAGATAATGC
AATCCGTCCATTGAAAATGTACCTTACAACAATATGTCCATTAAACACTA
TTCTGATGTTCTGGGCATTGGGCTTTTCCAGAAATAGTCCGTGCCCCCTG
TTGAGGATATTGGATATCCAGGGGGCTAACGATTTTTGTTCAAAAGTGGA
TATCCAGGAGGTTAAATATCTAAAAGGGAGAGAATACCCAGGGGGTAAAC
TGTCTTTTCAAGTAAAAAATATGATATCCAGGGGTAAACATCTGTATAAG
AGAGGATATCCAGGGTGTTAAGCATATTTTTAAGAGTGGATATCCAGGGG
GTCTTTACTAATAAAGTAGGATATCCAGGGGGTTCGAAACTTCGAAAAAT
CAATATCCTTAACAGTGGGAGTAAATTCTGGAAAAGCCCATCAGATGGAT
GTAATCTTGACCTTGATTTCAAAGGTTACATAAAATGTCATCCTGTAAAA
TACCTTTAGTCTATTTTAGTGTTTCTTTTGTAATATTTGTATTTTTTTTC
GGGAATTAATTAATTTAGGGTGCTTGCGGTGAGTGCAAATGAATTGTTGC
CGACAAATTTCGAGTGAAAAATTTGGCTCTCTTCGACTAATTAGCACACA
TTAGAGCAGTTGTTGGAGATGTTTTATTTTGGTCTAAATAATAAATCTTA
TATCGTCACTAAATTTAGAATTTTTTAAAAAGTTATATGAATTTATACGA
TTAAATATTATATTGACCACCAGACGTAAAAAGGTGATTCAAATAAATGA
GGAATAAATATTTTGCACTCTATAGACCTTGTTTACGATTTCATGCCTCT
TGATCGTAATTTGATCACATACTATCCAATAACCTAGACAGACATTGGAA
TTATGAAATGTTTATCCAAGTTTGACTTAACGCTTTTAAATGAATATACC
CAGGTTATGATTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044369XLOC_044369Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071431-exon-scaffold_60-1575043694:1374819..1375134TCONS_00071431-exon-scaffold_60-1575043694:1374819..1375134Clytia hemisphaericaexon
TCONS_00071431-exon-scaffold_60-1575043694:1374395..1374478TCONS_00071431-exon-scaffold_60-1575043694:1374395..1374478Clytia hemisphaericaexon
TCONS_00071431-exon-scaffold_60-1575043694:1373806..1373844TCONS_00071431-exon-scaffold_60-1575043694:1373806..1373844Clytia hemisphaericaexon
TCONS_00071431-exon-scaffold_60-1575043694:1372108..1372263TCONS_00071431-exon-scaffold_60-1575043694:1372108..1372263Clytia hemisphaericaexon
TCONS_00071431-exon-scaffold_60-1575043694:1370831..1370942TCONS_00071431-exon-scaffold_60-1575043694:1370831..1370942Clytia hemisphaericaexon
TCONS_00071431-exon-scaffold_60-1575043694:1370631..1370701TCONS_00071431-exon-scaffold_60-1575043694:1370631..1370701Clytia hemisphaericaexon
TCONS_00071431-exon-scaffold_60-1575043694:1363652..1363684TCONS_00071431-exon-scaffold_60-1575043694:1363652..1363684Clytia hemisphaericaexon
TCONS_00071431-exon-scaffold_60-1575043694:1363019..1363090TCONS_00071431-exon-scaffold_60-1575043694:1363019..1363090Clytia hemisphaericaexon
TCONS_00071431-exon-scaffold_60-1575043694:1362685..1362775TCONS_00071431-exon-scaffold_60-1575043694:1362685..1362775Clytia hemisphaericaexon
TCONS_00071431-exon-scaffold_60-1575043694:1362067..1362248TCONS_00071431-exon-scaffold_60-1575043694:1362067..1362248Clytia hemisphaericaexon
TCONS_00071431-exon-scaffold_60-1575043694:1359972..1361141TCONS_00071431-exon-scaffold_60-1575043694:1359972..1361141Clytia hemisphaericaexon
TCONS_00071431-exon-scaffold_60-1510915933:1374819..1375134TCONS_00071431-exon-scaffold_60-1510915933:1374819..1375134Clytia hemisphaericaexon
TCONS_00071431-exon-scaffold_60-1510915933:1374395..1374478TCONS_00071431-exon-scaffold_60-1510915933:1374395..1374478Clytia hemisphaericaexon
TCONS_00071431-exon-scaffold_60-1510915933:1373806..1373844TCONS_00071431-exon-scaffold_60-1510915933:1373806..1373844Clytia hemisphaericaexon
TCONS_00071431-exon-scaffold_60-1510915933:1372108..1372263TCONS_00071431-exon-scaffold_60-1510915933:1372108..1372263Clytia hemisphaericaexon
TCONS_00071431-exon-scaffold_60-1510915933:1370831..1370942TCONS_00071431-exon-scaffold_60-1510915933:1370831..1370942Clytia hemisphaericaexon
TCONS_00071431-exon-scaffold_60-1510915933:1370631..1370701TCONS_00071431-exon-scaffold_60-1510915933:1370631..1370701Clytia hemisphaericaexon
TCONS_00071431-exon-scaffold_60-1510915933:1363652..1363684TCONS_00071431-exon-scaffold_60-1510915933:1363652..1363684Clytia hemisphaericaexon
TCONS_00071431-exon-scaffold_60-1510915933:1363019..1363090TCONS_00071431-exon-scaffold_60-1510915933:1363019..1363090Clytia hemisphaericaexon
TCONS_00071431-exon-scaffold_60-1510915933:1362685..1362775TCONS_00071431-exon-scaffold_60-1510915933:1362685..1362775Clytia hemisphaericaexon
TCONS_00071431-exon-scaffold_60-1510915933:1362067..1362248TCONS_00071431-exon-scaffold_60-1510915933:1362067..1362248Clytia hemisphaericaexon
TCONS_00071431-exon-scaffold_60-1510915933:1359972..1361141TCONS_00071431-exon-scaffold_60-1510915933:1359972..1361141Clytia hemisphaericaexon
TCONS_00071431-exon-scaffold_60-1491911889:1374819..1375134TCONS_00071431-exon-scaffold_60-1491911889:1374819..1375134Clytia hemisphaericaexon
TCONS_00071431-exon-scaffold_60-1491911889:1374395..1374478TCONS_00071431-exon-scaffold_60-1491911889:1374395..1374478Clytia hemisphaericaexon
TCONS_00071431-exon-scaffold_60-1491911889:1373806..1373844TCONS_00071431-exon-scaffold_60-1491911889:1373806..1373844Clytia hemisphaericaexon
TCONS_00071431-exon-scaffold_60-1491911889:1372108..1372263TCONS_00071431-exon-scaffold_60-1491911889:1372108..1372263Clytia hemisphaericaexon
TCONS_00071431-exon-scaffold_60-1491911889:1370831..1370942TCONS_00071431-exon-scaffold_60-1491911889:1370831..1370942Clytia hemisphaericaexon
TCONS_00071431-exon-scaffold_60-1491911889:1370631..1370701TCONS_00071431-exon-scaffold_60-1491911889:1370631..1370701Clytia hemisphaericaexon
TCONS_00071431-exon-scaffold_60-1491911889:1363652..1363684TCONS_00071431-exon-scaffold_60-1491911889:1363652..1363684Clytia hemisphaericaexon
TCONS_00071431-exon-scaffold_60-1491911889:1363019..1363090TCONS_00071431-exon-scaffold_60-1491911889:1363019..1363090Clytia hemisphaericaexon
TCONS_00071431-exon-scaffold_60-1491911889:1362685..1362775TCONS_00071431-exon-scaffold_60-1491911889:1362685..1362775Clytia hemisphaericaexon
TCONS_00071431-exon-scaffold_60-1491911889:1362067..1362248TCONS_00071431-exon-scaffold_60-1491911889:1362067..1362248Clytia hemisphaericaexon
TCONS_00071431-exon-scaffold_60-1491911889:1359972..1361141TCONS_00071431-exon-scaffold_60-1491911889:1359972..1361141Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_60supercontigscaffold_60:1359972..1375134 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.193371	0	2.36886e-07	0.246299	1.09706	0.937926	8.95147	11.4365	20.1699	10.9566	21.1526	35.2256	0.495631	0.900009	0.242824	0.370018	4.49344	5.44214	0.91887	1.63779	17.482	17.7337	19.6659	30.1097	16.0552	14.699	2.86696	6.34678	119.917	131.096
Blast
[Close]
BLAST of TCONS_00071431 vs. Swiss-Prot (Human)
Match: MEP1B (Meprin A subunit beta OS=Homo sapiens GN=MEP1B PE=1 SV=3)

HSP 1 Score: 151.754 bits (382), Expect = 3.804e-38
Identity = 96/285 (33.68%), Postives = 130/285 (45.61%), Query Frame = 1 
Query:  265 ISWKGRMKIVFIFAAFTTLALCQKDGNSHDDILTINQKMFQKAAKGTSGFSGNKQVYKEEDLLEGDIVLTPKLRKYLDNQRDGKEVTAFDAAVSKAWSGARIPYTFARGFSYTS--AVSQAITEYNAKTCIRFVPRRSERNYVEFFHGGGCYSMIG-RIGGKQRISLGNGCGTKGVAIHEMMHALGFFHEQSRRDRDSYIQIMWQNIPGRVRYNFEKYKHGQAETLGQPYDKKSVMHYGNYAFSTNRQKTIVSR-SNRNEVLGQRRGLSTIDVRQLKTMYKCGGT 1107
            +SW   +  + + +   T      DG    DI  IN+ +         G           DL EGDI L    R  + N   G++           W    IPY         +   +  A   Y  KTCI F P   E NY+  F G GC+S +G R  GKQ +S+G  C       HE +HALGF+HEQSR DRD Y++IMW  I     +NF  Y    +++L  PYD  SVMHY   AF    + TIV+R S+  +V+GQR   S  D+ +L  +Y C  +
Sbjct:    6 LSWFLFLDALLVISGLATPENFDVDGGMDQDIFDINEGL---------GL----------DLFEGDIRLD---RAQIRNSIIGEKY---------RWPHT-IPYVLEDSLEMNAKGVILNAFERYRLKTCIDFKPWAGETNYISVFKGSGCWSSVGNRRVGKQELSIGANCDRIATVQHEFLHALGFWHEQSRSDRDDYVRIMWDRILSGREHNFNTYSDDISDSLNVPYDYTSVMHYSKTAFQNGTEPTIVTRISDFEDVIGQRMDFSDSDLLKLNQLYNCSSS 258
The following BLAST results are available for this feature:
BLAST of TCONS_00071431 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MEP1B3.804e-3833.68Meprin A subunit beta OS=Homo sapiens GN=MEP1B PE=... [more]
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