TCONS_00071430 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071430
Unique NameTCONS_00071430
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1701

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071430 ID=TCONS_00071430|Name=TCONS_00071430|organism=Clytia hemisphaerica|type=transcript|length=1701bp
CAGAATACAACGCCAAAACCTGTATTCGTTTTGTACCAAGAAGATCTGAG
AGAAATTATGTCGAATTCTTTCATGGCGGCGGTTGTTATTCTATGATTGG
ACGCATCGGTGGTAAACAAAGAATTTCATTGGGTAATGGATGTGGAACCA
AAGGTGTCGCTATTCATGAAATGATGCATGCTTTAGGATTTTTCCACGAA
CAAAGTAGGAGAGATCGTGATTCATACATTCAAATTATGTGGCAAAACAT
CCCCGGACGTGTCAGATACAATTTCGAAAAATACAAACACGGACAAGCTG
AAACTTTGGGACAACCCTATGATAAGAAATCTGTTATGCATTATGGAAAC
TATGCCTTTTCAACGAACCGACAAAAAACAATTGTTTCAAGATCTAACCG
TAATGAAGTTTTGGGACAACGACGTGGCTTGAGTACCATCGATGTCCGAC
AGTTAAAGACGATGTACAAATGTGGTGGTACCAAACCTGTACGACCAACA
ACAAGACCAACAACAAGACCAACTACTGGAGACTGCAAAGACAAATACAG
CCTTTGCTCAACATTGGCCGGACAAGGATTCTGTCGCGTCACTTTTACGT
CATGGATGAAAAACAACTGCAAGAAATCTTGCAAGAAATGTCCAACTAAG
CCTTCATTACCGAGATGTAAACCACACAAGAATTCAAGACATTGTGGAAG
TTGGCAAAAATCAGGTTTTTGCAGTGGGCGATATGCAAATTTCATGGGAA
ACCACTGTTATCAGTGCAAGAAATGTCGAAGATAATGCAATCCGTCCATT
GAAAATGTACCTTACAACAATATGTCCATTAAACACTATTCTGATGTTCT
Gggcattgggcttttccagaaatagtccgtgccccctgttgaggatattg
gatatccagggggctaacgatttttgttcaaaagtggatatccaggaggT
TAAATATCTAAAAGGGAGAGAATACCCAGGGGGTAAactgtcttttcaag
taaaaaatatgatatccaggggtaaacatctgtataagagaggatatcca
gggtgttaagcatatttttaagagtggatatccagggggtctttactaat
aaagtaggatatccagggggttcgaaacttcgaaaaatcaatatccttaA
CAGTGGGAGTAaattctggaaaagcccatcaGATGGATGTAATCTTGACC
TTGATTTCAAAGGTTACATAAAATGTCATCCTGTAAAATACCTTTAGTCT
ATTTTAGTGTTTCTTTTgtaatatttgtattttttttcggGAATTAATTA
ATTTAGGGTGCTTGCGGTGAGTGCAAATGAATTGTTGCCGACAAATTTCG
AGTGAAAAATTTGGCTCTCTTCGACTAATTAGCACACATTAGAGCAGTTG
TTGGAGATGTTTTATTTTGGTCTAAATAATAAATCTTATATCGTCactaa
atttagaattttttaaaaagttatatGAATTTATACGATTAAATATTATA
TTGACCACCAGACGTAAAAAGGTGATTCAAATAAATGAGGAATAAATATT
TTGCACTCTATAGACCTTGTTTACGATTTCATGCCTCTTGATCGTAATTT
GATCACATACTATCCAATAACCTAGACAGACATTGGAATTATGAAATGTT
TATCCAAGTTTGACTTAACGCTTTTAAATGAATATACCCAGGTTATGATT
G
Run BLAST on NCBI

transcript from alignment at scaffold_60:1359972..1370912-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071430 ID=TCONS_00071430|Name=TCONS_00071430|organism=Clytia hemisphaerica|type=transcript|length=10941bp|location=Sequence derived from alignment at scaffold_60:1359972..1370912- (Clytia hemisphaerica)
CAGAATACAACGCCAAAACCTGTATTCGTTTTGTACCAAGAAGATCTGAG
AGAAATTATGTCGAATTCTTTCATGGCGGCGGGTAAGCATGATTAAAGCG
GTTTTTAATATTTCCCTTCAACCTGGATATTGGGTATTCAGGCAGGAGAG
AATCTCAGATTAACTTTCTTTTTGAGGAAATCGAAATGGAAAATTTTGTA
CTATTTTTTAGTTGTTATTCTATGATTGGACGCATCGGTGGTAAACAAAG
AATTTCATTGGGTAATGGATGTGGAACCAAAGGTGTCGCTATTCATGAAA
TGATGCATGCTTTAGGTAGGAAAATTTGGGTTTGAAATTTTGAAAATTTT
AGATTAAAATATTAAATCAATGGACACAAAAGTGGTTTCAAATCCCTTCA
ATAATATCAGTTTAACGTTGAACAGCTGGGGAGGCAAAACACCCTCACTA
CAGCAGGTTCATAAAAGAATTTGCATTTTTATTAAAAATATATTTCTAGG
GTTCTTTCACGAACAAAGCAGAAGAGATCGTGATACATACATTCAAATTA
TGTGGCAAAACATCCCTGGACGTAAGTTATAGCTATAACGATTCTGAATA
TTCGACACGACTCTGTCTCAACGTCTCGATTTGATGAGAACATTTTCGCG
AGGAGCGAAAGAGCGATGGGAATGAGAACCAACTACACGTTTGTTTTAAA
GAACATCCAAAATTTTTGCAGCCTTCGGATGTTCTTAACTATTTGAGTTT
AAAGCCTAAAAATGTTCTTAACGTGTTCTTATTATGACCATTTTGTGAGT
ATTTTTGACCATTTTCCTAAGAAATTGGTTCATTTTGAGTCCACAAAGCC
TTAAAATGTTTTCAGCTTGCTCTTAACATTTTGGCCATCAAAGTCTTATG
TTCTTATATAGTTTGTTCTTATGAAGAAAAAAACGTACCTCACCCAATCG
CAATTATGGTAGGTGTGGGTTTTCGGATGGCAATCTTAAAGAGATACTTC
TTACNAGTACCTCTCCCAATGGCAATTATGGTAGGTGTAGGTTTTCAGAT
GGATGTGCAATCTTAAAGAGATACTTCTTACCAAGGACAGCTGTAGTAAA
TTTTTGTGGGTAGGGGCCAAATAACGGATGTGTGATACAAGTGAGTTTTG
ACTTGTTACATTAGAAGACAATAACATACATAAGTTGAAATGGCGACTAC
AAGAGAGGGATATCTGAAAATTTTATTCTAGCCTCTGGGTTATGAATTTA
GCTGGTGTATCTGCCAATAGACTTGAATTTTTTTGCGCAATGCATCATGG
GTAATCATTCGGGGAGAATTCGGTAAAGTCGATATCGTCTATTGCCAAAC
ATCTCTTTTCTAAGAACTGGTCATTACAAGACAGTCACTTCATGCCATTG
TACCAATCAGATTAAAATTTTACTTTCAATATTTTGTTATTAGGTGTCAG
ATACAACTTTGAGAAATACAGACATGGGGAAGCACAGACTTTGGGACAGC
CTTATGATAAGAGATCTGTGATGCATTATGGGAAGTGAGTAATAAAATTA
GCCTTATTGTTTGTTTCCTGTCTCAGAAACGGATATTGGTGAAAATGGAC
TTGCCATTTCTATATGAGACCATGTTCGCACGTGACGGTTCCGTTTTGCT
CCGAAACGAAATGAAGCCATTCTATTGGTTACATTCAAGTGATACGTCAC
TTCTAACCAATAGGATGGCTTCATTCTGTTTCGGAGCGAAACGAAACAGT
CATGTTCAAACATGGTCTAATATATTGACCGATTGGTTCGGTCGCTTTGA
TGAATTTTTTATAAAGACTTATAATTTGCCAGTCACAAAAGTTACTTCTA
TCTTACTCTCTCAAGATTTTTCAAATTTAAAATTTTTACTCTGTTTCAGC
TACGCCTTTTCAACAAACCGACAAAAAACAATTGTTTCGAAATCTAACCC
AAATGAAGTTTTGGGACAACGACAAGGCTTGAGTGTCATCGATATCCGAC
AGTTAAAGACGATGTACAAATGTGGCGGTACCAAACCCGTCGTAACTCAA
AGACCTACTACCACTAGTATGATGATTTTTGATAGCACAACATTGTGTCA
GATTTTTTCCATGTTTCTGTCTTTGTTCCTATTTTGTCCACTCTAACCTG
AGGATTGTTCTTGATTCATTTATTAGGCGGTTTATAAGTCTCATTGTTAT
CCTTGTAACGTTGTTTTGATACACCCCTGTCTCACAGCCCCGCTGGAACT
TTTTTCCTCAGTGGGGATAACAATTCCAATTGAAATCCCAATGGGGATAA
AAATTCTATTGTTCCAAGTTTAAAAAACCCAGTGGCGATGGTTTTAGAGT
GCAATTTTTAAACATGGAATTTCGAGTGGGGACGACATCAAATTCAATTT
CCCAGTGGGGCTGAAATTCAAGAGTATTTTCCCACTGGGGACGAAATTTT
TGCTTAATTTTCCAGTGGGGCTGGGGTCCCAACAGGTCAGTGACACAGGG
GTGTTTTGATAAACAAGAATATGAACTTAGATGAACAAAGGATAAGGTCC
ACAATTTCTAGAGCTTTCAATTACAACGCAGATTATTTCTCTAAAATCTT
TCAGACTGTAAAGACAGATACAGCATGTGTACAACATTGGCAAGAGAAGG
ATTTTGTCGCGTCACTTTTACGTCATGGATGAAAAACAACTGCAAGAAAT
CGTGCAAGAAATGTCCAACAGAACCAGTAAAACCTTCATTACCGAGATGT
AAGCCACACAAGAATTCCAGATACTGTGCAAGTTGGGTACGTTCAGGCTA
TTGCACCAATCGTCGGTATGCCAGCTTCATGACAGGCCACTGCTCTTCTT
GTAAAAAGTGTATTTAGGTCAAGACCACCAAAGACTTTTAGTCTTCAAGG
TTATATGTATAATTGATAAATATATATTTTTGTGACATTTGATTGATCTA
ATTATTTTTTGTCTTTTGATTAAAAATTGAAATATAAATTGTCGAAAATG
AATTATTTGATCTGATCCAAACTCCCGTAAAAATTAGCGGTGCCTGAATA
TCTTCTAGTTCGCTGAATTCCATGCTAGTCTTACAAGGTCGTTTATTTTT
CACAATAAAAATAACTTCCCTTGTTTTTTTTGCGGTGGAAATCCTTTGAC
GTATTGTTAAATCGCAAATTTTTACCCTTGCTATAAATATAAATATATCG
TTTGCAAGATATAACATATTTACTCATAGCAATTGTAATGGTCTTCAAAT
TGGAGATAAGGACCAAAGTAATGTGCATGATTTTCACGTACAGATTTATA
TGGTACTATACTTATGGATATCTTTCCAAAATCCGTCTGATTGGTCAATT
TTGAAATTATGATGACATTATACCTAATCGACCAATCAGTGTTCAGAAAA
ATGATTTGAATGTTAAACGAACTTTTGGAAAAAAGTTAATTACAGTAAGC
AAGTAAATTCGGGCATTACCTAGACATCGTTGACCTCCCACAGATCTAGG
ACTATAAGTATAAACTAATCCTATCCAACTTGATTTATTTTTCGACTAAA
ACAATGTGTTCTTCCTATGCTAGATGGCCTACGAGGTAGTCTTTGATTTA
AGTCGAAAAACTTGCGGAGCCGTTTACCAACAACTTAGCAGCAACATATT
TAATCTCCGAGCATAGCCTGATAATTCTAAACACGGAACAAATTCACTCC
GAAGCTCATAACTCGGCGTTCGCCGTATCCCCCAAGAGCGGTGGTGCTAC
TGATGATATGGTTGTGTGAGATCACAAGATATAGGTTTTACCTAGATATA
CACTTCGTAGCTTTGAAAAATCTATCGTCTACACAAGGGAACTAGGTCAC
TAAAAAAGGGAAAAAGTCCGAAGGCATGTAAGCCGGGGTGAAATATAAAC
AGTAATTGCGCTTTATTCACGACTTTAAACTCCGCGTTTATATATTTTCC
CGAGTTCCAATAACTCTAACGGACGATAACATCGTATATCGTATATCTTT
AAAAGTAACGTGTGCAAACAACGTCAAATGAAATTTGAGAATCTAACTAT
TCCTTATAGCTTCAATCACGTAAAGAAACACCCTCAAATAAAAATTATAA
CAGAAATGATTGACGTCATTTTCACAACCACAAAATGAAAGATGACCCAT
CATCACCCTAAAAAAAGGCCTAAGGGCAAGTGTATATAAGAAAAAAAGTG
TCTAATTTTCGATCAGAGTAAAATTTCAAAGGGTGGAGCAAACGATCGGA
GAAAATGAAATCGATTTTTCTTCTATTTGCAGCTTACGGTATGAATTTCT
TCTTTTTCAGAATATTTGTTGCTTAGCCAACTTGAAGGTGAGTCCGTGAT
AGAAATTTGGGTTCCACGGCCAATTTTTCCGATTTCGCACCGTTTTTGTG
CTTTTAGGGGGGGGGGATCGTCATCTGAATTTTGCCACCGCTCAAAATAG
TGGCTTCATCTATCTTCTTTAAGGAATTCAATCTCAGCATTGTTTTACCA
TAATATACTTTTTCGTTCAGTCATGGTAAGCTGCAAGAAAGATGGTAATA
GTCATGATGACATTTTCGATATCAATCAGAAAATGTTCAAAAGAGCAGAA
TCAAGTAAGTTTTTAAACATTTGTTTCTCAGGCGTTTTCATTTTCCAAGC
CTTTTATAAAACTCTTTTACTTATGACTGAACTCGCAATTAACGATGTTC
GATAGCAGCACCCTGTTTTTTTAATCATATCACGATCACGAAATTTGTCC
ATCGCCCAAAAATAGCGAAAGATTTTAATTTAAGTATCACGCAAAAATTT
TGATCACACCGAAAAGAAATTTGGAACCACTCAATCATACAAGAACAAAG
CCCCAATCACACCATAATCATGTAAATTTTTGAGGCTGTCTCCTTAACCC
ACATGTTACCCAATTTAAATACTTACTTAAAAAATTTATCATATCTTCAT
CCATGATTTTGACCGCTTCCTTATAGAGCCTCGATTTACCATCAGATTTA
TCATCAGATATATTTCTAATTTTTACAATCGGTTGGCTGTACTGACTTTA
TGCAGCATGCTACCATACACACCCCTGTCTCACAGCCCCGGTGGAACTTT
TTTCCTCAGTGGGGATAAAAATTCATATTGAAATCCCAATGGGGATTGTT
CAAAGGTTAAAAAATCCAGCCGGGATGGTTTTGGAGTTGAATTTTTAAAC
ATTTATTTCGAGTGGGGATGAAATATAACTCAATTCCCAGTAGGGCTAAA
ATTCCAGGGTATTTTCCTACCAGAGACAAAACTTTTGCCAGATTTTTCAG
TATGGCTGGGGTCCCAGTGGGTCTGTGACACAGGGGTGTCATACGAATAA
TGCGTTGGATATCAGAACATAATCCTTCTTATTCGCCTTTCTTTGTTACA
GAAACAAGCTCATTTTCTGGTTCAAAAGGAAGCAACTACAAAGGTGAAGA
CCGATTTAATTTTAGACTAAGTTACCCATTTTTCCCTCTTTTCTTCTCTT
TTTTTCTCTTTGTAATGAATATTTTTAGTTCCCACTAATTGCGGATTAAA
TTTCATTAATTACATGATACAATATTGAATAGGGTGACTTTTGGCGGTTT
GTTTCTCAAGGGTACTTTCAGTTTTACATTAAGTTTTATTCGACATTCTT
ATAGCACTCACATACACATTGCCTCAAAATAACTGCTCTTATGACCATAG
TATTTATTGGCCTATGGGCACGCAACGTCTTATCGACATCCCATGGACGG
CTTTAAGACCTTTGGACGTCCTAGAAACGTACATTAGACGTCCAAAAGAC
GTTTGTGCCCATTGTGATTCCTGAAAAAGAAGCTTGATTGGTAATTTGTG
AAATCTTAGATCAATTCATTTTCTTTTTGTTCCTCAGCGGATGACATGCT
TGAAGGGGACATTATTCTAACTCCAAAGCTAAAAAAATACTTGAACGACC
AGAGAGACGGAAAAGCTATCAGCCCCTTTGATGCTGCTGTCAGCAAAGCG
TGGCCTAAGGCTCGCGTGCCGTACACTTTCGCCAGAGGCTTTTGTAAGTC
AATTTCATTTGTTGATTTCAATTTTTTAAGTTCTGTTTTGTAATCAAAGT
AACAAGAGAGACAAATACGAAAAAGAATTTAGAATGACGGATGCAAAAAT
GCAGATTCAGGTCTCAAAATTATTCCTTGATTATAATATCTCCTCGCCGA
ATAGTTTTGTTATTTTGTATTTCACTTTCAGCATACACGTCTGCTGTTAG
GCAAGCCATCGCAGAATACAACGCCAAAACCTGTATTCGTTTTGTACCAA
GAAGATCTTCTGATCGAAGCTACGTTGAATTCTTTCACGGTGGCGGGTAT
GTGAAGTATTTTTACGCTTTTCTTATGACATCTTCAATGTTAAAAGTCTA
GTACCGTCTGCGTCTCGGTTCATTTCATGTAAAACAATCCAGGGGGCAGT
GGGTTTACCAACTGATGGTATGTGCGGCGAAAAGAATGGATTTTAGAATC
GCACCTTTACAGTGCAGAAAAAAATCGGTGAAATTCATACCCTTACAGTG
CATTTTTTCAAATTTTAAACTCTTTGAGAGCAAAAAAATCAAGATTTTCC
AGCAAAAGTTAGCAATTTTTCCTAGATTTGCTGAAATTTCTACCCATACA
GTGCAATAGTGCAATTATCAAAAGTCCACCCTTACAATGCATTTCTGATA
CTTTGAAGAACATACCCTTAACTGCTGCACATACCCGTCGGTCAATTTGC
CTGACTGCCCCCTCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNCTCCCCCCCCCCCCCCCCCCCCCGGGAAAACATTTTGCAAAAC
TATTATAACCTCCAGAACGTCGATTTTCCTCTAATCCAAACTTTCAGTAT
CCAAATTACTCTGTAAGTCGTACTAAAAGTTAAATCCTTGATTGGAGTTC
TTCTCTAAGATAAAGTTACGTTGAGTTAGAGAGAAGTAAGGTCAACTGAA
GTATCTCACACTATAATAATAATAATGTCTTTTGATTCACAGTAATGACT
TTTGAATCACCATAGCATTTCAAGAAATCGATTTTAACAAAGAATTTCTA
TCTTTAGTTGTTATTCTTACATTGGACGTGTCGGTGGAAAACAAAAAATT
TCATTGGGTAACGGATGTGGAACCAAAGGCGTCGCTATTCATGAAATGAT
GCATGCTTTAGGTGAGGAAGGTTTACTCGGTACCTAATAAGCGGGGGGTT
TTGAATAAGCGGGGTGATTGGAAAAATTATAAGCGGGGTGGGGGTTGGAA
TAAAAATGTCATTGGTGGGAATTTTTTGAATTAGGGCAAGACCATGGGAG
TTGGAATAAGACTTGGAATAACAGTGTAAATCTTTGAAAAATCAATTAGC
GGGGGAGGGGACGCTTATTAGGTAGCCGAGAGTAAGTCTTATTCCAATGA
TACATTTCACATTTCTATCGTATAAGCCAGTCATCATTTTTAATACAGTT
TGTGGATCTTTGATCAATGAAGGGATAATTAACCGATTCGAAAAACGTCC
AAGATGTCCAAAATAATAAGCCAAAATTTTCCCAGCTTGGACTGGTGATT
TACCCCGCCCTCGTTTTCTCCCCTGTTACGGTCCTTCAAAAGTTCAAACC
ATAATTTCATATGACTGTGGTGTCTATGCTGCGTCTTATCCCCTTCGTCT
AGAACTTGAAACAGAGTGGTTTTAAGTATAGAACTGGCTCTATAATGTTG
ACTTACTTGTTATCTTTTCCAGGATTTTTCCACGAACAAAGTAGGAGAGA
TCGTGATTCATACATTCAAATTATGTGGCAAAACATCCCCGGACGTAAGT
TTGTTTTACAGTGGTGTCTCCATAACTCGAACACGCATGGGAAACTCGAA
TTTGTTCGAGTTAAGGGAATTTCGAGTTACGGAGTAAGGTTGATAAAAAA
TCAGTAACTGAAGGGACAGGAAAACTTGTTCGAGTTAAAGAGACTTTATT
GTATTTATATTATATTATTATGTCACTAAAATAACTATACTACTATACCT
AGGTTGATTTCTATAATAACATTTGACTTTACTTCAGGTGTCAGATACAA
TTTCGAAAAATACAAACACGGACAAGCTGAAACTTTGGGACAACCCTATG
ATAAGAAATCTGTTATGCATTATGGAAAGTAAGTTATAAATCATTACATG
TTACGTGTTGTTATTACATTAACATTCTATTGAATGTTTAGATACCATTG
TATATTACCCCTGTCTCAATTTACTTTTGACTCACCGTTGGCGTTGATGA
ATAAAATCCTATTGTAAAATTGTGACGATTTACTGGCCTTGCTAAGTACG
AATAAAACACAGGGTTAGCAAAAGTTTCTTAAGTCTCTTACTTTGTTCAA
CCAAATTCTCTGTTCTCCAAATTACAAGTCCCCAACTCTGCATAAATAAG
TTTTAGTTTATCGACCCAATGATATTCATATTGGAAGTTTATCGTAGCTT
GGATCACGATATTTACGTTTGGCTACGTTTAGAGAGATTCCTCTCCCTAT
ATTACATCCTTTCAATCACACTTTGAGATCTTTTACTTAAGACTTTCAAC
TCTCTGCGTTTCAGCTATGCCTTTTCAACGAACCGACAAAAAACAATTGT
TTCAAGATCTAACCGTAATGAAGTTTTGGGACAACGACGTGGCTTGAGTA
CCATCGATGTCCGACAGTTAAAGACGATGTACAAATGTGGTGGTACCAAA
CCTGTACGACCAACAACAAGACCAACAACAAGACCAACTACTGGAGGTTA
GTATTTCCCCAACTGACACTAAAATTGTTTAAAAACGTCCGAAACGTCCG
AAACGTTTATACGGACATGTATTTAAATACAAAATCCCTGTCTCAGTGAT
TTGGTAAAAGTTCTTTTAGCCAGGGGGATAAAATGACGATATAACTATAA
AATTATGAAATTACATCTCGAAATAGATGTAAAATCACCTGTTCGCTGCC
GACTAAAAATTTTGGTGTCTAAAGCTCAGATATTCAGGAAGGATTTTGAT
TTTCTGAATGAGGATGAGAGTTCAGTGAGAGTTGAAATGGGGACAAAATT
TCTTGCCGAGCGACTATTTTTCAGCTAAATTTTCTAGTATTCCTGTCTCT
GTGAGGAGGGACTGCGATACGGGAGTGTCTGATAAATGATAAAATCATGT
CAATATTATGGTTTAAACCTTTACTAAAGTATTACCTTAATGAACACGTA
TTACCTACACCCAGCCAAAAAACCGTAAAAGTAGGGTGGCTGAAGGCTCA
AAATGTGATAAATCCGCTAGGAATAGACCTTTTCATAAATTACGTCACAA
ACATCACTTACCTCGTATTCAAACAATTACCATAGTGATTATGTCCCTTG
AGACATTAAATGATTTTTTTTATGAACTGAAAATAGTTTTAATAAAATCC
CCTGGGAGTCAATCGCCAAAACAATAATTTCAAAACGAGGCAAGTGATGT
TCGTAACGTAATTTATGAAAAGGTCTATTTGAGAAAAAAATCTCATTTGC
TCAAAAGTCGGGAGGCTGAAGTCTCCCCAGTCCCCCCGTTTCCGCACTCA
ACCCACTCATTCCGTGGATTCCAGTGTACACAATTAAATAAATGTCCTAA
ATAAATGGACTATAAATAAAACGTCAACCCTGTCTTTCCATTGTAAACAC
TTTACTCTTGTTTTATTCTAGACTGCAAAGACAAATACAGCCTTTGCTCA
ACATTGGCCGGACAAGGATTCTGTCGCGTCACTTTTACGTCATGGATGAA
AAACAACTGCAAGAAATCTTGCAAGAAATGTCCAACTAAGCCTTCATTAC
CGAGATGTAAACCACACAAGAATTCAAGACATTGTGGAAGTTGGCAAAAA
TCAGGTTTTTGCAGTGGGCGATATGCAAATTTCATGGGAAACCACTGTTA
TCAGTGCAAGAAATGTCGAAGATAATGCAATCCGTCCATTGAAAATGTAC
CTTACAACAATATGTCCATTAAACACTATTCTGATGTTCTGGGCATTGGG
CTTTTCCAGAAATAGTCCGTGCCCCCTGTTGAGGATATTGGATATCCAGG
GGGCTAACGATTTTTGTTCAAAAGTGGATATCCAGGAGGTTAAATATCTA
AAAGGGAGAGAATACCCAGGGGGTAAACTGTCTTTTCAAGTAAAAAATAT
GATATCCAGGGGTAAACATCTGTATAAGAGAGGATATCCAGGGTGTTAAG
CATATTTTTAAGAGTGGATATCCAGGGGGTCTTTACTAATAAAGTAGGAT
ATCCAGGGGGTTCGAAACTTCGAAAAATCAATATCCTTAACAGTGGGAGT
AAATTCTGGAAAAGCCCATCAGATGGATGTAATCTTGACCTTGATTTCAA
AGGTTACATAAAATGTCATCCTGTAAAATACCTTTAGTCTATTTTAGTGT
TTCTTTTGTAATATTTGTATTTTTTTTCGGGAATTAATTAATTTAGGGTG
CTTGCGGTGAGTGCAAATGAATTGTTGCCGACAAATTTCGAGTGAAAAAT
TTGGCTCTCTTCGACTAATTAGCACACATTAGAGCAGTTGTTGGAGATGT
TTTATTTTGGTCTAAATAATAAATCTTATATCGTCACTAAATTTAGAATT
TTTTAAAAAGTTATATGAATTTATACGATTAAATATTATATTGACCACCA
GACGTAAAAAGGTGATTCAAATAAATGAGGAATAAATATTTTGCACTCTA
TAGACCTTGTTTACGATTTCATGCCTCTTGATCGTAATTTGATCACATAC
TATCCAATAACCTAGACAGACATTGGAATTATGAAATGTTTATCCAAGTT
TGACTTAACGCTTTTAAATGAATATACCCAGGTTATGATTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044369XLOC_044369Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071430-exon-scaffold_60-1575043694:1370831..1370912TCONS_00071430-exon-scaffold_60-1575043694:1370831..1370912Clytia hemisphaericaexon
TCONS_00071430-exon-scaffold_60-1575043694:1370598..1370701TCONS_00071430-exon-scaffold_60-1575043694:1370598..1370701Clytia hemisphaericaexon
TCONS_00071430-exon-scaffold_60-1575043694:1363019..1363090TCONS_00071430-exon-scaffold_60-1575043694:1363019..1363090Clytia hemisphaericaexon
TCONS_00071430-exon-scaffold_60-1575043694:1362685..1362775TCONS_00071430-exon-scaffold_60-1575043694:1362685..1362775Clytia hemisphaericaexon
TCONS_00071430-exon-scaffold_60-1575043694:1362067..1362248TCONS_00071430-exon-scaffold_60-1575043694:1362067..1362248Clytia hemisphaericaexon
TCONS_00071430-exon-scaffold_60-1575043694:1359972..1361141TCONS_00071430-exon-scaffold_60-1575043694:1359972..1361141Clytia hemisphaericaexon
TCONS_00071430-exon-scaffold_60-1510915933:1370831..1370912TCONS_00071430-exon-scaffold_60-1510915933:1370831..1370912Clytia hemisphaericaexon
TCONS_00071430-exon-scaffold_60-1510915933:1370598..1370701TCONS_00071430-exon-scaffold_60-1510915933:1370598..1370701Clytia hemisphaericaexon
TCONS_00071430-exon-scaffold_60-1510915933:1363019..1363090TCONS_00071430-exon-scaffold_60-1510915933:1363019..1363090Clytia hemisphaericaexon
TCONS_00071430-exon-scaffold_60-1510915933:1362685..1362775TCONS_00071430-exon-scaffold_60-1510915933:1362685..1362775Clytia hemisphaericaexon
TCONS_00071430-exon-scaffold_60-1510915933:1362067..1362248TCONS_00071430-exon-scaffold_60-1510915933:1362067..1362248Clytia hemisphaericaexon
TCONS_00071430-exon-scaffold_60-1510915933:1359972..1361141TCONS_00071430-exon-scaffold_60-1510915933:1359972..1361141Clytia hemisphaericaexon
TCONS_00071430-exon-scaffold_60-1491911889:1370831..1370912TCONS_00071430-exon-scaffold_60-1491911889:1370831..1370912Clytia hemisphaericaexon
TCONS_00071430-exon-scaffold_60-1491911889:1370598..1370701TCONS_00071430-exon-scaffold_60-1491911889:1370598..1370701Clytia hemisphaericaexon
TCONS_00071430-exon-scaffold_60-1491911889:1363019..1363090TCONS_00071430-exon-scaffold_60-1491911889:1363019..1363090Clytia hemisphaericaexon
TCONS_00071430-exon-scaffold_60-1491911889:1362685..1362775TCONS_00071430-exon-scaffold_60-1491911889:1362685..1362775Clytia hemisphaericaexon
TCONS_00071430-exon-scaffold_60-1491911889:1362067..1362248TCONS_00071430-exon-scaffold_60-1491911889:1362067..1362248Clytia hemisphaericaexon
TCONS_00071430-exon-scaffold_60-1491911889:1359972..1361141TCONS_00071430-exon-scaffold_60-1491911889:1359972..1361141Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_60supercontigscaffold_60:1359972..1370912 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.00729317	0.0600415	0.399014	0.775851	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.345552	0.350766	0.164134	0.659219	0	0	0.174295	0	0	0
Blast
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BLAST of TCONS_00071430 vs. Swiss-Prot (Human)
Match: MEP1B (Meprin A subunit beta OS=Homo sapiens GN=MEP1B PE=1 SV=3)

HSP 1 Score: 144.05 bits (362), Expect = 2.315e-36
Identity = 71/161 (44.10%), Postives = 93/161 (57.76%), Query Frame = 3 
Query:    6 YNAKTCIRFVPRRSERNYVEFFHGGGCYSMIG-RIGGKQRISLGNGCGTKGVAIHEMMHALGFFHEQSRRDRDSYIQIMWQNIPGRVRYNFEKYKHGQAETLGQPYDKKSVMHYGNYAFSTNRQKTIVSR-SNRNEVLGQRRGLSTIDVRQLKTMYKCGGT 482
            Y  KTCI F P   E NY+  F G GC+S +G R  GKQ +S+G  C       HE +HALGF+HEQSR DRD Y++IMW  I     +NF  Y    +++L  PYD  SVMHY   AF    + TIV+R S+  +V+GQR   S  D+ +L  +Y C  +
Sbjct:   98 YRLKTCIDFKPWAGETNYISVFKGSGCWSSVGNRRVGKQELSIGANCDRIATVQHEFLHALGFWHEQSRSDRDDYVRIMWDRILSGREHNFNTYSDDISDSLNVPYDYTSVMHYSKTAFQNGTEPTIVTRISDFEDVIGQRMDFSDSDLLKLNQLYNCSSS 258
The following BLAST results are available for this feature:
BLAST of TCONS_00071430 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MEP1B2.315e-3644.10Meprin A subunit beta OS=Homo sapiens GN=MEP1B PE=... [more]
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