TCONS_00071421 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071421
Unique NameTCONS_00071421
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1280

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071421 ID=TCONS_00071421|Name=TCONS_00071421|organism=Clytia hemisphaerica|type=transcript|length=1280bp
aaaagaaaagaaaagcaaatAATAAAAACATCATGGGGCAATCACAAAGC
ACACAACAGGGAGGACGACCtagagaattttcaaagacagttGATGATCT
TGAATTTAATGTTCCAgacatttcaaagaaaataaagactGGGGATGAGT
TTGAAGACTCCAGTGTCACCACTACCGAAGAGCATCTTATAAAAGTACAA
GACGATGGAGGTTCTGGGTACATTGTGGCAGATGAAGAACGGCCCGTACA
AAAGAAAACAGTTCCTGTTGTTTTTCATTGGGAACATGGTGGTGATGAAG
TCTTCTTATCTGGCTCCTTCAACGATTGGAAAACAAAAGTACCCATGACT
AAAAGTGGTAATGAACACACTGCAATCATTGAGTTGCCAAGTGGAACACA
CGAGTTCAAATACTATGTCGATGGTAATTGGTTGCATGACCCTGGACAGA
CGATCAATGATCATTTCGATGGACGAAACAATGTCATAACTGTTTCTGAT
AGTGATTTTGATTTCACCAAGGCTTTGATGACCGACGAAACTGATGAGAA
GAAACAACATACCGCAAGCTTCGATTCCTCGACTGGTGGTACTTCGCCAT
CCGGTTCTTACAGTAAACGTATTCCACACCATGGGGGAGTGCATATCTCA
ACACACAACAGTGAAAGTTCCCACCCTCCATCGTTGCCACCGCATCTGCT
GAACGTCATTTTAAACAAAGAAACTGAACAGGAAGACCCAACCATGCTAC
CTGTTCCTCATCATGTCGCCTTGAATCATCTTTATGCGCTCTCCATCAAG
GACTCAGTGATGACGCTCAGTGGAACACATCGTTACAAAAGAAAATACGT
CACTACGGTCCTCTATAAACCGGTCGTTCTAAAGTAATATTCAAAATGGT
GGTCGTAGTACTTATTAATTCAGCAACTTGATTCTGACCGGACTTCCAAT
AGTCGCAGGGGAAATTGTTTAATATTAATCGTTGATTAGGAACGAAATTC
AATGGCGAGGGGTTGCGAAATACGCAGATGTATCGATATTTGCGAACAAA
GTTTGGCCTAACAACCTACTGTAGGATTTGTTTTTCGAATTTCATTTCTA
CCTTTCAATTTGTaaataatattttgtaaaatagcAAATATAACAACTTG
ATGAAACAAAAGTAGTGTGTTATGAATTCCCGGGGGCAaccgattttgaa
aacgaccgtacgttcggccaaaaatcaggtctctaaaatcggacccttac
agtgcaggaaaaatttggctgaaaatcgag
Run BLAST on NCBI

protein sequence of TCONS_00071421-protein

>TCONS_00071421-protein ID=TCONS_00071421-protein|Name=TCONS_00071421-protein|organism=Clytia hemisphaerica|type=polypeptide|length=294bp
KKRKANNKNIMGQSQSTQQGGRPREFSKTVDDLEFNVPDISKKIKTGDEF
EDSSVTTTEEHLIKVQDDGGSGYIVADEERPVQKKTVPVVFHWEHGGDEV
FLSGSFNDWKTKVPMTKSGNEHTAIIELPSGTHEFKYYVDGNWLHDPGQT
INDHFDGRNNVITVSDSDFDFTKALMTDETDEKKQHTASFDSSTGGTSPS
GSYSKRIPHHGGVHISTHNSESSHPPSLPPHLLNVILNKETEQEDPTMLP
VPHHVALNHLYALSIKDSVMTLSGTHRYKRKYVTTVLYKPVVLK
Run BLAST on NCBI

transcript from alignment at scaffold_60:1320045..1333402-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071421 ID=TCONS_00071421|Name=TCONS_00071421|organism=Clytia hemisphaerica|type=transcript|length=13358bp|location=Sequence derived from alignment at scaffold_60:1320045..1333402- (Clytia hemisphaerica)
AAAAGAAAAGAAAAGCAAATAATAAAAACATCATGGGGCAATCACAAAGC
ACACAACAGGGAGGACGACCTAGAGAATTTTCAAAGACAGTTGATGATCT
TGAATTTAATGTTCCAGACATTTCAAAGAAAATAAAGACTGGGGATGAGT
TTGAAGACTCCAGTGTCACCACTACCGAAGGTATATTTTTAGTTATTAAT
TATCAATCAATTATCCACACTTTAGGTCGATTTCGAGCGTCCGAAAGTCA
TAAGTTTTGAGAGTTTGAAGAGTTGGCAATTCGATGTATATTGGAGCCAT
TAGAGCTTCTTCAATAGTCTATACTTTAGCTACATTTTATTTCACTTTTC
TATATATATAGTCTAGAAGTATAAAACCTTCAACNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNGGGGGGGGGGGGTAGGGGCGTTTATTTGGAACCTAAGATTAATGAT
GGATTGTCATTGATCGATATTTTGTGAAGTGGGCATTTCTAATTTCTCCC
TTTCACTTTTTCCAGAGCATCTTATAAAAGTACAAGACGATGGAGGTTCT
GGGTACATTGTGGCAGATGAAGAACGGCCCGTACAAAAGAAAACAGTTCC
TGTTGTTTTTCATTGGGAACATGGTGGTGATGAAGTCTTCTTATCTGGCT
CCTTCAACGATTGGAAAACAAAAGTACCCATGACTAAAAGGTGATTTAAG
TTCTTTTGCCAAAGTGATATTCATGATATGCACCACTGGAGGGTCTTTTG
AGAATTTTTCCAGCCAATACGTTACTTTTTAATTTTTTAAGTGAAGTATT
GGGTGGAAGATTTTCAAAGATTTCAGAAGACTTTCCAGTGGTGCATATCA
TGAATACGAAAATGTTTGTTTGACACTAAAGAAAGTATCTTCTTTTCTAA
TCTTATATGATGTTGATCAGACATTAGAAATGGGAGATGCAAAACGAATT
CATTTCATTGCTTGTTTCATATAATGTCTTTTGTTTTCTCTACACAAGTC
GGGTCAGGTCTTGTCTGTACACAGACCCAGTATCTAGAGCTAATTTCAGA
ATTCATTGCGGTAGAGGGTCTGTTGTCATTGTCTTTTCTTATTTGAGATT
TTTCAACCCGACTGCTGCGACGGAGTATTGGTGAGTGAGGGTAGACGATG
AAAGAAGTGTTGCTATTTATAAATCATACTCCATTGGAAGGTCTCCGTAC
GGGAATTATTTATCAAACAGACAATGCGCACATAGTGTCCTATGAAGTGA
TATACGTGAGATACACTCTGGTACAGAGTAGTTCAGGCCGGATGATACTC
AAGTTCGTCATGACCTACCTTATTGGAACTAATTTTAGCGGGAATTAATT
TTAGCGTTTTTCGCGGTTTTTCGTCAAAATCGCGAAAATTTGAGCCCGCG
AAATACAATTTTTTGCAACTTTATCGAAAAATTTGAAAAATCCCTAGGAA
AATTAAAGAAAATTGCCCAAAAAATAGCAAAACCGCGAAACTTAAAACCC
GCGAAATGCAATTTTCGGATATTTTTTTTCGACCGCGAAAATTAGTTCCC
GCGAAAATTAGTTCCAATAAGGTAGGCAAATGACTCGATTACAGCGATAC
GGAATAGTCAGAAAAAGATCATTGATCATTGAAATCTCAATTTCGATAAT
ATTAGAAAGCAAGACAAATTGTCTTTTCATCAGGCAATTTTCATGAAACA
AAGAAAACTTTTACATTTATAACATTAGATCAAAACTGCGCCCCATACAC
GCTAAGGCTAAAACTAAACTCTTCAATATTTCATGAAGGAAAAGTGTTTA
AAAAAAAAGTGTTTCGTGTAGAAACGGAACAAAGATTTCCCCTGAAAACC
TAGAAAACTTCGGTACAAAGACTTCTATTGCTTTAAGCAGTACAGCACGG
TTAATTATTTTTAAAGACGTCTCCATTTTAGGACCGCCTTTAAAACCCCA
CTGATTTTCCCACTGTATGGGTAGGGCGTCAACAGACATTTTTGGGGAAA
AGTCAAAAAATTCAAGATGTAGTGTTTTTTATGAAGATTTAACCTATTGT
GAGGCGTTCTGCGCAATTTTTAAGATCAGAAGTCCAAAATTGGACGAACC
CCCCCCCCCTGGGGGTACTGATTCGCACTACAGGCCAAAATTGGGAAAAA
ATAATGGCATTTTCTGGCCTTTTCAGGCCTGTAAATATGTCAAAACTATT
GCAAATCTTTTTTTTTTCATTTGCTGTACTAAATTTTATGAAGAAACAAC
AAAATAATCATTTTGGGTTGAAAATTGTGCCCATTAGAGCCCTAAACGAG
CTGTTTTAAGCCAATTTTGGGTAGCAAAATGCTTTTAAAGGCCAATTTTG
CAAGTTTATAAACTTTAAACCGATTAATTCACATGTCTGAAATTTTCAGA
GATGGAAGTCTTCAATAAAATCTTTTAAGTAGAATGAATTTCAATTTTTT
TCAAAAATTCATAATGGCGTTTTTAAAAATCGCTTTTTAGCAACAAAAAA
ATCATATTTATCAAAAAATAGCATTTTTTAAGGCAAGCTTTTACAAACTG
AGTTTAAAATGCTGACTGAAATTTTTTTGCAGTGATAGTATTCTGGAGAT
ACTCAAGGGAAATCAAAATCATTTGGGTCTGGGATGCGTCTATGTCCACC
ATTATGGAAGTAAAATCCCTGCTAAGAGCCATTTTTCAGGCAAAAACCCA
AATTTGGACTGAAAAAATCTCTAAAATGACAATAGACATGGGCCCGAATT
TTCTTGCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAAA
TAAAATCCCTGCTAAGAGCCATTTTTCAGGCAAAAACCCAAATTTGGACT
GAAAAAATCTCTAAAATGACAATAGACATGGGCCCGAATTTTCTTGCAGT
AGTAGTATTCTGGAAATACTGCAGGAAAATTTAAGTCAACTGGGTTTGGG
ATTTGGGTATATCCACCATTTTGCAATTGAAATTCCTGCTAAATCGCAAT
ATTTCAAGCAAAAATCCCATTTTTGACTGGCAATAAACACGAGCCTAAAA
TCTTTTTGCAGTGATAGCCTTCTGGAAATACTAGAGGGAAATCAAAAAAC
TTTGGGTTTAGGATAAGGGTATATCCGCCATTATGGAAATATCTGCTAAA
ACTGGCTAAAATGCAACGTTTCAAGCCAAAACCCCATGTTTGACTAAAAA
CTGCTCTAAAATGGCAAGAGACATGGACCCAAATTTCGTTGAAGAGATAG
TATTCTGTGAATTCTCTTGGGAAAACAAAATCATTTGAGTCTGGGATTTA
TTTAGATCCACCATTATGGAAATGAAATTTCTGTTAATCCGAGACCCAAA
TGATTTTGATTTCCCTGGAGTATCTCCAGAATACTATCACTGCAAAAACG
ATTTCAGTCAGCATTTAAACTCAGTTTGTAGAAGCTTGCCTTAAAAAATG
CTATTTTTTGATAAATATGAATATTTTTGCTTAAAAGCGATTTTTGAAGA
CGCCATTATAAATTTTCACCCAGCCGGCTTCCGGAAACACTACATTTTTT
TATTTTCGCCTAATATGATGAAATACAATATCCGTCTTTTCGTCGTAAAG
AATTGCATAAAGGCAGTTCAAAATTGCATCCTTAAAAATAGGGTAACCGC
GCTGTATTGATTACCGATTTTCCCTTCTTTATTTTCAGTGGTAATGAACA
CACTGCAATCATTGAGTTGCCAAGTGGAACACACGAGTTCAAATACTATG
TCGATGGTAATTGGTTGCATGACCCTGGACAGGTGGCTATACTCATAGTT
TTTTCTTCATTCGTGTGCTCTAAACATTCACTAATTTTGTATGTTTTATA
TATCCTAGTAATTTTTCAAATTATTAAAAAAATGCTTACCTCGAAAATAA
AAAGAATATAATTGATAGAAGAGTCCTAGTTAAATTTGTATTCATATTCA
ATCAGGATGCTCGACAAAATCGAGACAAAATCGAGACAAAATCACTAGAT
ATTGGTCCTATCGATTTGTCGCCGAAGTTGCGCCACACACAACGATTCTC
ATGTGTCACAATAGCAAAATGAGTTGGGCACTCCTTGTGATGAGCTATTA
GTTATTGTTTTTTCTTCGTTTAGAAGACGATCAATGATCATTTCGATGGA
CGAAACAATGTCATAACTGTTTCTGATAGTGATTTTGATTTCACCAAGGC
TTTGATGACCGACGAAACTGATGAGAAGAAACAACATACCGCAAGCTTCG
ATTCCTCGACTGGTGGTAAACAATCATTTTGATCTTTCCTTTTAATGAAT
AACGTTTTAAGTTTAAGTTTTTTAAGCATTTCCCTATTCTGCATGCAAGC
CTTTTTGAAATGCAGCAAAACCACATCATACTTATGTACGACCTCAGACT
CAATTGCATTATGGTAATGTTCATTTTTTATACTTATTTCTTTTTGGAGG
ATTGGCGTCTAAAATTCTAAAATTATTTCGTAGAGGTCGGTAGACCTGCA
AAATATAATTCTATGATTAAAAAAAATAAAAATGAAAGACGAGAGACTGT
TGCGATTTTTATCGTGTTTTCTATCAATACGCTTGATTTATTGGAAGCTT
AAAACCGATAACCCATAGATAAAGAAAGCGCCACAGAAAAAGTAATCCTA
GACAAAAATCTGATTTTCAGTTATCAAATATTACTTTCTTGACTACGTCT
TTATTTTCGAGATCATGTCGAGTTCATGCCGAGTGAATCCGTAAAGTCAG
TAGTACATTCACTGCATGACTGATATCGTCTTTATTTCGAAAGCGACTTC
TTTTACAATTGATTTTTAAATATAGAGAGAATACACGCTTTTTTATAAGA
ACCCGTAAATTTATGTCAAGAGGCTCGGCTGTTCTTATTTTTTCATGATT
ATCAAGTGTAAATGTTCTTGAAATGTTTATAATGAGCTTACTTTATTCAC
TAGAATCGTCATTTTCTTAACCTTTTGTGAGCGCTGTTTTTTTAAAAAAA
AGTTGAAATTTTTCGAATTTTCTTTTTGAAACTCAAAACTTTAAAGTGCC
ATAAAAGCTTGTAGCTTTTGATTTAGAGGATGGTTTTGGTACCATTGGAA
AGCTGTTTTCATACTCTTTCTAAAAGCATTCGGTTTATGCCCTTTAAATC
AAGTGGTCAGAAGCTATAGCATAATATAGAACGCCACAGCTGCCAAAAGT
GTTCAACAACTGTACCGCGTGGTACATTTGCAAAGCGGTTGGGTCCTTAA
AGCAGCTCGTGTGGTGGTTTAAGCTTTTCGCGTGGTAGTTCAAGCTTTTC
GTGTGGTAGTTCAAGCATTTGGTGTGGCGGTTTAGGCTTTTTCCCCGATA
GTTCAAGCTTTTCGTGTGGTAGTTCAAGCTTTTCGTGTGGTAGTTCAAGC
ATTTGGTGTGGCGGTTTAAGCATTTGGTGTGGCGGTTTAGGCTTTTTCCC
CGATAGTTCAAGCTTTTCGTGCGGTAGTTCAAGCTTTTCGTGCGGTAGTT
CAAGCTTTTCGTGCGGTAGTTCAAGCTTTTCGTGCGGTAGTTCAAGCTTT
TCGTGTGGTAGTTCAATCGTTACGTGGTGGTTTAAGCTTTTCGTGCGGTG
GTTCAATCGTTCGGTGGGGTTCAAGCTTTTCGTGTGGTGGTTCCATCGTT
AGGTGATGGTTCAAATTGTTATGTGGTCGTCGTTTAGTAATTTATGCGGA
TAAATTATAATAAATTAAAAAAGGAAATAATTCGGTCCCGGTAATTTGTC
GATTAAAAAAGTTCTAAAATGGTAGCTGTGAAGCGACGAATTTTTTTGAT
TTACGATTTTGGGATAGTGACTCTTGCTTTCTTGTTGTCCTGGGTTTCAT
TTTGCGGGTATTTAATTTCGCGATTTTGTCTATTTTACACCTGACTTCTT
TCATTTTTCTAGGGGTTCTTGGCATAAAATAAAAGATTTCACGGGTATTC
AATTGTGCAATTTTTAAGCTTATTTTAGTGGCCCATATAAAAAATTGATA
AAAATCCGTTCACAAAACCTTTGAGTCGGTAACTCGGTTAATTCGTTAAA
ATAATTTCCTAATTATTTCCAAGGAAACAAAGTTCTTCCGTTTAAATTTA
TTTTACATTTACTTTTGGTTGAAAAGATAACAATCGAGTGTAATCAAGAG
CTTGTTCATGCGGGAAGAAATTCTAATGTGTATAAAATAATTAATAATTT
CGAGTTAGTTAGAGGGTCTATAGAGTATTAATAAAGAAAATTAATCTTTT
GCTAGTAACAAGGTTACTTTTTGGACCTACCGCGAGGTTCTATAAATTAA
CCCATGTCCGTCCGTCCGTTCGTCCGTCCGTCCGTCCGTCCGTCCGTCCG
TCTGTTACCAGCTTTTCTCAGGATTGGCTCATTAGTTTTTTCTGCTTTTT
TGCACAATGATGCAAAATGGCAATGCCCAGAACGTGACGGAGCCCGATTT
TTGAGAAAAAAATTATTTGGGCAAATTTGGGCCAAAAACTACCTAAAAAT
AGGGTTTTTTGGACTTTGTGCAAAATCCTGTCATTACTTTTTTCTGATTT
TTTGTACAAAGATGGAGGGCAAGATTCTCTAAAGAATGGCTGAAGTAGTT
TTTCCCGGAAAATTCCTATTCGCCTTAAAAAACGGATTTTCGTATTTTGG
GGGAAATTCCCTTTAACCAAATAAGAAAATATAGCTTTTCTCAATGTTGA
CTCGTTGTTTTTTTCTGATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGGGCCAA
AATCTGCCTAAAAATAGGGTTTTTTGGACTTTGTGCAAAATTCTGTCATT
ACTTTTTTCTGATTTTTTGTACAAAGATGGAGGGCAAGATTCTCAAAAAC
TCTAAAGAATGGCTGAAGTGGNCAAATTATTGTCACTTTTTTCTTATTTT
CATCTGATGTTAATCATTAGGTAGGTCCATTCAGCATGTTGCTTTTTTTC
TTTTCATTAATGAATAAACGGCTAAGAAAAAATCTACTGGCGTGAGACTG
AAAAAAAGGAAAAAGCTAGTTAGCAGTTACTAACTTATTGGAAATAATAT
TGGCGGGAATTTAATTATCTTCCACAATTGGACTATTTTATTTTTTATAG
TCCATACAGGGGTATTGACGAACTTTTCCAGGGGGTTTTCAACCCTTTTT
TCCAAGGGGTTTTTGGTAGTTTCAAAAGATTTCCAGGGGGCTTTATTATG
AAGATTTATTTCCAGGGGTTCATAAAACTTCACAGATTTTTTGTTGACTT
TGAAAAGAAGAATGTTTCCAGGGGGCTAAAACTTGACATCCAAGGGGTAA
GCTTATGTTGAAAATTTCCAGGGGGTCTCCTTGTTAAAAAAGTTTGTCAA
TACCCCTGTATTTTTAGTGGTTTTGAAATGGAATAGCCATAATACTTCCC
TTCTTTAATCAATAAATATAGACTGAAACATAAAACAACAAAGCATGGTC
TGGAGTGAACCGCCTACTGCTTCGCTACCATTTTAGAACTTTTTTAATCG
ACAAATTACCGGGACCGAATTATTTCTTTTTTTAAATTATTATAATTTAT
CCGCATAAATTACTAAACGACGACCACATAACAATTTGAACCACCGCCTA
ACGATGGAACCACCACACGAAAAGCTTCCGGAGAAGTTCCAGATGTTATT
TCCAGGTACTAAAAATGCAAATATATCTATTGACATGGGAAATTTTTCAC
TAATATCTTCTGAGAATGCTCTTCTTCTTGGTGTTACTATCGACAGTGCT
TTATCATTTTATACTCATATTCAGNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNTCTCATTTGGATGTTTTGCAGTAAGATGGCACA
TAATCTTTTGACTGAAGCTCACTACAGAGCTCTTAGAGCTAAAGAAAATC
TTCTAAATCTTGATTATGACAAGCTTTTGGTTAAAGCAAATTGTGCGTCT
ATCCATACTCATAACCTCCAANTACTATTAAGTAAATATTAGATTGTCAT
GTTGGTTTGAATTAGTCTTTTGTACTATTTTGTTTTGTACCAACGTTAAA
TAAAGAATAAATAAATAAAAAAATAAACCACCACACGAAAAGCTTGAACC
ACCACCGAACGATTGAACCACCGCACGAAAAGCTTAAACCACCACGTAAC
GATTGAACTACCGCACGAAAAGCTTGAACTACCGCACGAAAAGCTTGAAC
TACCGCACGAAAAGCTTGAACTACCGCGCAAAAAGTCTAAACCGCCACAC
CAAATGCTTAAACCGCCACACCAAATGCTTGAACTACCACACGAAAAGCT
TGAACTACCACACGAAAAGCTTAAACCGCCACACCAAATGCTTAAACCGC
CACACCAAATGCTTGAACTACCACACGAAAAGCTTGAACTACCACGCGAA
AAGCTTAAACCACCACACGAACTGCTTTAAGGACCGAACCGCTTTGCAAA
TGTACCACGCGGTACAGTTGTTGAACACTTTTGGCAGCTGTGGCGTTCCA
TAGCCTCAAGTTTGAGACTCAGTGTTTTGGCTTGTTTTGAACACATAATT
ATACGTGTCCCTCGTGGTCTAAAGGTTAATTCTGAGGCTGGGGTTGGGTT
GTTCTCGATTAATTCTTTGGTTTTTGCCAAAAAAATATTGCATCAAATTC
TTCTTAAAAAAGCGTGTATACTAAAACCAAAATTTAAATATACGACGAAA
ATAAGAACAACTCTGCTTTCAGCCAAATTAACACATTTAACTGAAGATTT
TCTTGCAAAGTAAAAAGGAAAACTAGGAACACAGCCCTGTATACATTGTC
TGTTAANTGCAAAGTAACAAGGAAAACTAGGAACACAGCCCTGTATACAT
TGTCTCTTGGTATTTTAATTTCAGGTACTTCGCCATCCGGTTCTTACAGT
AAACGTATTCCACACCATGGGGGAGTGCATATCTCAACACACAACAGTGA
AAGTTCCCACCCTCCATCGTTGCCACCGCATCTGCTGAACGTCATTTTAA
ACAAAGAAACTGAACAGGTACTCTAAAGAGATGTTTTTATGACCTGTAAT
AGCTTATTTCGTGAAAAAAGCTAATCGGAATTATTTTTACCGGGAAAAAT
TTAGTCACTTTGCCAAACATTCACCAACCGACCTTGTCTTAGTTGGGGGA
AGTTTAAATAACCCATCCTTCAAATTTTTCTTCAAACAAGGTATCAAAAC
AGTTTGCTAAACATCTATTCATTCAAGTTTCTCGAGCTGCATAAAGCACA
GGAAAAAATCTTTAAATCCCAGGCCTGGAAAATGGCCATTTTCGGGGTGG
GATTTTTTTAGCCCTGAGATTGTTGGTCTTCTGACGCAGCGTTTTTCACT
AATACACTAGATCTTCTTCCCATAGTTAGTCCACGCTAACTAACTACCTC
AATGAATGGACACTATCAATGTTATCGATTTAAGGTTTTTCCGCCTATTG
AATGAATCTATCAACAATTTTTCAGTAAATCAAAGCTTTGTCTGTATTAA
TTAAGGTTGTAGTTTTGAATTACCAGTCATTCATACACACATTTTTTTTT
TATAAGAACAACCAAAATTTTTTAAGCCTTCGAATGTTCTTATCTTTTTG
AGTTTTAAGCCTAAAAATGTTCTTTTGGCCATTTAGTGAATATTTTTTAC
CATTTTCCTAAGAAAAAGGTACAAACCCTTAAAAAATGTTCTCAACTTGT
TCTTAACATTTTGCCCAGTGAAACCTTATGTTCTTATATAGTTTGTTCTT
ATAAAAAAAACCGTGTAACTATTCAATGCTTTAGTATGCCTCTTTTCGAC
GGCTTTTTAAATTGTTTTCCATTTTTACAGGAAGACCCAACCATGCTACC
TGTTCCTCATCATGTCGCCTTGAATCATCTTTATGCGCTCTCCATCAAGG
TGAGTTTTCTATCCTTACTGCTACTGAGCAGTCAAGTGTAGTGGCTATTG
AACGGTATTGAAAATCCAAGAAACTACCTTAAGGGAAAACTAGTTTTGGC
GGGTTTAATTTTTCTGAGCGATAAATAATTTTGGTCAAATTTGTCAAATT
CGCCAAAAGTAGTTCCCACAAGAATAAGTTCCCTTTAAGTTAATGCAATC
TAAAAGGGGTATTGAAATTTCCCTATTTTATGGTCAAATTAGTTAATACT
CCAAAATTGGCCAGAAAATTCCAAAAAGAGTTCTAGGTTGTTTTACGAAA
TCTGCAGATTATTCATAAACTGGACTCTTGCTAATTGAGACTTCTATTAT
TTTTTCACATTCGCTGTTCTGAAGCCAACTGAGTAGTACTCAAAGTTACA
TTTACATGACTACTAGAATCAAAAAGCTCTCCTTTCCAATTTGAGTTCGT
CAAACCTAAGTTTCACTGACCCAGTTCAACTTAAAATTCTCGATAACGGT
TTATTTACTTTTAGGACTCAGTGATGACGCTCAGTGGAACACATCGTTAC
AAAAGAAAATACGTCACTACGGTCCTCTATAAACCGGTCGTTCTAAAGTA
ATATTCAAAATGGTGGTCGTAGTACTTATTAATTCAGCAACTTGATTCTG
ACCGGACTTCCAATAGTCGCAGGGGAAATTGTTTGTTAGTATGATTGCTT
GTAATATGCTCTCTCATTCGTTACAATACGACGAAAAAACATTTCTTGTG
CTAGATAAACACTATTTTTTTAACGGAGCAATAAAGGAGTTGAAATTCAT
TTCCAAGGCAAGGATAGTATACTCATGTCCGGACGATGGCAATTCTGATT
CTGATGCACACAGTATTTTTTATCTTTGTTCTGTTGTATTTTTCATTTTT
CGGAAGGTTAAAAGGGTTGTAAATGATAGTCTTTCATTGCAGCCGTGTTT
TGACTGCTTCTTTTTTATAGTCTGAACTACCACATACACGTGCCATTCAT
AAGAATAAACAATATATAAGAACATAAGAATTCAATAGCGAAAATATTAT
AAATACACGTTAAAATTTAATTAATCACCATCCCAATTCTATACTTTTCA
TTGCTTTTTTTTTGCTAGACTTGAAACCACAGTTTTAGTTTATTTTACAT
ACAAAATATGTTGGTGACATGGCCCTCAAAAAATTCCCGTTCCATTATAT
CACTCTCGTTCCGTTTAATTTATTATGTCATACAGTACTGTGATAAACTG
TCAAACAGAACAGTTAAGTTTAGATTGACACGAATATCTTGTATGCCTCT
TTGACTAAGGTCTTGAATTTGAAGTCACTTTCTTACCTTGCTTTTTAGAA
TATTAATCGTTGATTAGGAACGAAATTCAATGGCGAGGGGTTGCGAAATA
CGCAGATGTATCGATATTTGCGAACAAAGTTTGGCCTAACAACCTACTGT
AGGATTTGTTTTTCGAATTTCATTTCTACCTTTCAATTTGTAAATAATAT
TTTGTAAAATAGCAAATATAACAACTTGATGAAACAAAAGTAGTGTGTTA
TGAATTCCCGGGGGCAACCGATTTTGAAAACGACCGTACGTTCGGCCAAA
AATCAGGTCTCTAAAATCGGACCCTTACAGTGCAGGAAAAATTTGGCTGA
AAATCGAG

Coding sequence (CDS) from alignment at scaffold_60:1320045..1333402-

>TCONS_00071421 ID=TCONS_00071421|Name=TCONS_00071421|organism=Clytia hemisphaerica|type=CDS|length=6195bp|location=Sequence derived from alignment at scaffold_60:1320045..1333402- (Clytia hemisphaerica)
GACTCAGTGATGACGCTCAGTGGAACACATCGTTACAAAAGAAAATACGT
CACTACGGTCCTCTATAAACCGGTCGTTCTAAAGTAAGAAGACCCAACCA
TGCTACCTGTTCCTCATCATGTCGCCTTGAATCATCTTTATGCGCTCTCC
ATCAAGGTACTTCGCCATCCGGTTCTTACAGTAAACGTATTCCACACCAT
GGGGGAGTGCATATCTCAACACACAACAGTGAAAGTTCCCACCCTCCATC
GTTGCCACCGCATCTGCTGAACGTCATTTTAAACAAAGAAACTGAACAGA
CGATCAATGATCATTTCGATGGACGAAACAATGTCATAACTGTTTCTGAT
AGTGATTTTGATTTCACCAAGGCTTTGATGACCGACGAAACTGATGAGAA
GAAACAACATACCGCAAGCTTCGATTCCTCGACTGGTGTGGTAATGAACA
CACTGCAATCATTGAGTTGCCAAGTGGAACACACGAGTTCAAATACTATG
TCGATGGTAATTGGTTGCATGACCCTGGACAGAGCATCTTATAAAAGTAC
AAGACGATGGAGGTTCTGGGTACATTGTGGCAGATGAAGAACGGCCCGTA
CAAAAGAAAACAGTTCCTGTTGTTTTTCATTGGGAACATGGTGGTGATGA
AGTCTTCTTATCTGGCTCCTTCAACGATTGGAAAACAAAAGTACCCATGA
CTAAAAGAAGAAAAGAAAAGCAAATAATAAAAACATCATGGGGCAATCAC
AAAGCACACAACAGGGAGGACGACCTAGAGAATTTTCAAAGACAGTTGAT
GATCTTGAATTTAATGTTCCAGACATTTCAAAGAAAATAAAGACTGGGGA
TGAGTTTGAAGACTCCAGTGTCACCACTACCGAAGGACTCAGTGATGACG
CTCAGTGGAACACATCGTTACAAAAGAAAATACGTCACTACGGTCCTCTA
TAAACCGGTCGTTCTAAAGTAAGAAGACCCAACCATGCTACCTGTTCCTC
ATCATGTCGCCTTGAATCATCTTTATGCGCTCTCCATCAAGGTACTTCGC
CATCCGGTTCTTACAGTAAACGTATTCCACACCATGGGGGAGTGCATATC
TCAACACACAACAGTGAAAGTTCCCACCCTCCATCGTTGCCACCGCATCT
GCTGAACGTCATTTTAAACAAAGAAACTGAACAGACGATCAATGATCATT
TCGATGGACGAAACAATGTCATAACTGTTTCTGATAGTGATTTTGATTTC
ACCAAGGCTTTGATGACCGACGAAACTGATGAGAAGAAACAACATACCGC
AAGCTTCGATTCCTCGACTGGTGTGGTAATGAACACACTGCAATCATTGA
GTTGCCAAGTGGAACACACGAGTTCAAATACTATGTCGATGGTAATTGGT
TGCATGACCCTGGACAGAGCATCTTATAAAAGTACAAGACGATGGAGGTT
CTGGGTACATTGTGGCAGATGAAGAACGGCCCGTACAAAAGAAAACAGTT
CCTGTTGTTTTTCATTGGGAACATGGTGGTGATGAAGTCTTCTTATCTGG
CTCCTTCAACGATTGGAAAACAAAAGTACCCATGACTAAAAGAAGAAAAG
AAAAGCAAATAATAAAAACATCATGGGGCAATCACAAAGCACACAACAGG
GAGGACGACCTAGAGAATTTTCAAAGACAGTTGATGATCTTGAATTTAAT
GTTCCAGACATTTCAAAGAAAATAAAGACTGGGGATGAGTTTGAAGACTC
CAGTGTCACCACTACCGAAGGACTCAGTGATGACGCTCAGTGGAACACAT
CGTTACAAAAGAAAATACGTCACTACGGTCCTCTATAAACCGGTCGTTCT
AAAGTAAGAAGACCCAACCATGCTACCTGTTCCTCATCATGTCGCCTTGA
ATCATCTTTATGCGCTCTCCATCAAGGTACTTCGCCATCCGGTTCTTACA
GTAAACGTATTCCACACCATGGGGGAGTGCATATCTCAACACACAACAGT
GAAAGTTCCCACCCTCCATCGTTGCCACCGCATCTGCTGAACGTCATTTT
AAACAAAGAAACTGAACAGACGATCAATGATCATTTCGATGGACGAAACA
ATGTCATAACTGTTTCTGATAGTGATTTTGATTTCACCAAGGCTTTGATG
ACCGACGAAACTGATGAGAAGAAACAACATACCGCAAGCTTCGATTCCTC
GACTGGTGTGGTAATGAACACACTGCAATCATTGAGTTGCCAAGTGGAAC
ACACGAGTTCAAATACTATGTCGATGGTAATTGGTTGCATGACCCTGGAC
AGAGCATCTTATAAAAGTACAAGACGATGGAGGTTCTGGGTACATTGTGG
CAGATGAAGAACGGCCCGTACAAAAGAAAACAGTTCCTGTTGTTTTTCAT
TGGGAACATGGTGGTGATGAAGTCTTCTTATCTGGCTCCTTCAACGATTG
GAAAACAAAAGTACCCATGACTAAAAGAAGAAAAGAAAAGCAAATAATAA
AAACATCATGGGGCAATCACAAAGCACACAACAGGGAGGACGACCTAGAG
AATTTTCAAAGACAGTTGATGATCTTGAATTTAATGTTCCAGACATTTCA
AAGAAAATAAAGACTGGGGATGAGTTTGAAGACTCCAGTGTCACCACTAC
CGAAGGACTCAGTGATGACGCTCAGTGGAACACATCGTTACAAAAGAAAA
TACGTCACTACGGTCCTCTATAAACCGGTCGTTCTAAAGTAAGAAGACCC
AACCATGCTACCTGTTCCTCATCATGTCGCCTTGAATCATCTTTATGCGC
TCTCCATCAAGGTACTTCGCCATCCGGTTCTTACAGTAAACGTATTCCAC
ACCATGGGGGAGTGCATATCTCAACACACAACAGTGAAAGTTCCCACCCT
CCATCGTTGCCACCGCATCTGCTGAACGTCATTTTAAACAAAGAAACTGA
ACAGACGATCAATGATCATTTCGATGGACGAAACAATGTCATAACTGTTT
CTGATAGTGATTTTGATTTCACCAAGGCTTTGATGACCGACGAAACTGAT
GAGAAGAAACAACATACCGCAAGCTTCGATTCCTCGACTGGTGTGGTAAT
GAACACACTGCAATCATTGAGTTGCCAAGTGGAACACACGAGTTCAAATA
CTATGTCGATGGTAATTGGTTGCATGACCCTGGACAGAGCATCTTATAAA
AGTACAAGACGATGGAGGTTCTGGGTACATTGTGGCAGATGAAGAACGGC
CCGTACAAAAGAAAACAGTTCCTGTTGTTTTTCATTGGGAACATGGTGGT
GATGAAGTCTTCTTATCTGGCTCCTTCAACGATTGGAAAACAAAAGTACC
CATGACTAAAAGAAGAAAAGAAAAGCAAATAATAAAAACATCATGGGGCA
ATCACAAAGCACACAACAGGGAGGACGACCTAGAGAATTTTCAAAGACAG
TTGATGATCTTGAATTTAATGTTCCAGACATTTCAAAGAAAATAAAGACT
GGGGATGAGTTTGAAGACTCCAGTGTCACCACTACCGAAGGACTCAGTGA
TGACGCTCAGTGGAACACATCGTTACAAAAGAAAATACGTCACTACGGTC
CTCTATAAACCGGTCGTTCTAAAGTAAGAAGACCCAACCATGCTACCTGT
TCCTCATCATGTCGCCTTGAATCATCTTTATGCGCTCTCCATCAAGGTAC
TTCGCCATCCGGTTCTTACAGTAAACGTATTCCACACCATGGGGGAGTGC
ATATCTCAACACACAACAGTGAAAGTTCCCACCCTCCATCGTTGCCACCG
CATCTGCTGAACGTCATTTTAAACAAAGAAACTGAACAGACGATCAATGA
TCATTTCGATGGACGAAACAATGTCATAACTGTTTCTGATAGTGATTTTG
ATTTCACCAAGGCTTTGATGACCGACGAAACTGATGAGAAGAAACAACAT
ACCGCAAGCTTCGATTCCTCGACTGGTGTGGTAATGAACACACTGCAATC
ATTGAGTTGCCAAGTGGAACACACGAGTTCAAATACTATGTCGATGGTAA
TTGGTTGCATGACCCTGGACAGAGCATCTTATAAAAGTACAAGACGATGG
AGGTTCTGGGTACATTGTGGCAGATGAAGAACGGCCCGTACAAAAGAAAA
CAGTTCCTGTTGTTTTTCATTGGGAACATGGTGGTGATGAAGTCTTCTTA
TCTGGCTCCTTCAACGATTGGAAAACAAAAGTACCCATGACTAAAAGAAG
AAAAGAAAAGCAAATAATAAAAACATCATGGGGCAATCACAAAGCACACA
ACAGGGAGGACGACCTAGAGAATTTTCAAAGACAGTTGATGATCTTGAAT
TTAATGTTCCAGACATTTCAAAGAAAATAAAGACTGGGGATGAGTTTGAA
GACTCCAGTGTCACCACTACCGAAGGACTCAGTGATGACGCTCAGTGGAA
CACATCGTTACAAAAGAAAATACGTCACTACGGTCCTCTATAAACCGGTC
GTTCTAAAGTAAGAAGACCCAACCATGCTACCTGTTCCTCATCATGTCGC
CTTGAATCATCTTTATGCGCTCTCCATCAAGGTACTTCGCCATCCGGTTC
TTACAGTAAACGTATTCCACACCATGGGGGAGTGCATATCTCAACACACA
ACAGTGAAAGTTCCCACCCTCCATCGTTGCCACCGCATCTGCTGAACGTC
ATTTTAAACAAAGAAACTGAACAGACGATCAATGATCATTTCGATGGACG
AAACAATGTCATAACTGTTTCTGATAGTGATTTTGATTTCACCAAGGCTT
TGATGACCGACGAAACTGATGAGAAGAAACAACATACCGCAAGCTTCGAT
TCCTCGACTGGTGTGGTAATGAACACACTGCAATCATTGAGTTGCCAAGT
GGAACACACGAGTTCAAATACTATGTCGATGGTAATTGGTTGCATGACCC
TGGACAGAGCATCTTATAAAAGTACAAGACGATGGAGGTTCTGGGTACAT
TGTGGCAGATGAAGAACGGCCCGTACAAAAGAAAACAGTTCCTGTTGTTT
TTCATTGGGAACATGGTGGTGATGAAGTCTTCTTATCTGGCTCCTTCAAC
GATTGGAAAACAAAAGTACCCATGACTAAAAGAAGAAAAGAAAAGCAAAT
AATAAAAACATCATGGGGCAATCACAAAGCACACAACAGGGAGGACGACC
TAGAGAATTTTCAAAGACAGTTGATGATCTTGAATTTAATGTTCCAGACA
TTTCAAAGAAAATAAAGACTGGGGATGAGTTTGAAGACTCCAGTGTCACC
ACTACCGAAGGACTCAGTGATGACGCTCAGTGGAACACATCGTTACAAAA
GAAAATACGTCACTACGGTCCTCTATAAACCGGTCGTTCTAAAGTAAGAA
GACCCAACCATGCTACCTGTTCCTCATCATGTCGCCTTGAATCATCTTTA
TGCGCTCTCCATCAAGGTACTTCGCCATCCGGTTCTTACAGTAAACGTAT
TCCACACCATGGGGGAGTGCATATCTCAACACACAACAGTGAAAGTTCCC
ACCCTCCATCGTTGCCACCGCATCTGCTGAACGTCATTTTAAACAAAGAA
ACTGAACAGACGATCAATGATCATTTCGATGGACGAAACAATGTCATAAC
TGTTTCTGATAGTGATTTTGATTTCACCAAGGCTTTGATGACCGACGAAA
CTGATGAGAAGAAACAACATACCGCAAGCTTCGATTCCTCGACTGGTGTG
GTAATGAACACACTGCAATCATTGAGTTGCCAAGTGGAACACACGAGTTC
AAATACTATGTCGATGGTAATTGGTTGCATGACCCTGGACAGAGCATCTT
ATAAAAGTACAAGACGATGGAGGTTCTGGGTACATTGTGGCAGATGAAGA
ACGGCCCGTACAAAAGAAAACAGTTCCTGTTGTTTTTCATTGGGAACATG
GTGGTGATGAAGTCTTCTTATCTGGCTCCTTCAACGATTGGAAAACAAAA
GTACCCATGACTAAAAGAAGAAAAGAAAAGCAAATAATAAAAACATCATG
GGGCAATCACAAAGCACACAACAGGGAGGACGACCTAGAGAATTTTCAAA
GACAGTTGATGATCTTGAATTTAATGTTCCAGACATTTCAAAGAAAATAA
AGACTGGGGATGAGTTTGAAGACTCCAGTGTCACCACTACCGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044366XLOC_044366Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071421-proteinTCONS_00071421-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071421-exon-scaffold_60-1575043694:1333223..1333402TCONS_00071421-exon-scaffold_60-1575043694:1333223..1333402Clytia hemisphaericaexon
TCONS_00071421-exon-scaffold_60-1575043694:1331663..1331837TCONS_00071421-exon-scaffold_60-1575043694:1331663..1331837Clytia hemisphaericaexon
TCONS_00071421-exon-scaffold_60-1575043694:1328221..1328314TCONS_00071421-exon-scaffold_60-1575043694:1328221..1328314Clytia hemisphaericaexon
TCONS_00071421-exon-scaffold_60-1575043694:1327738..1327876TCONS_00071421-exon-scaffold_60-1575043694:1327738..1327876Clytia hemisphaericaexon
TCONS_00071421-exon-scaffold_60-1575043694:1322586..1322728TCONS_00071421-exon-scaffold_60-1575043694:1322586..1322728Clytia hemisphaericaexon
TCONS_00071421-exon-scaffold_60-1575043694:1321704..1321772TCONS_00071421-exon-scaffold_60-1575043694:1321704..1321772Clytia hemisphaericaexon
TCONS_00071421-exon-scaffold_60-1575043694:1321019..1321188TCONS_00071421-exon-scaffold_60-1575043694:1321019..1321188Clytia hemisphaericaexon
TCONS_00071421-exon-scaffold_60-1575043694:1320045..1320354TCONS_00071421-exon-scaffold_60-1575043694:1320045..1320354Clytia hemisphaericaexon
TCONS_00071421-exon-scaffold_60-1510915933:1333223..1333402TCONS_00071421-exon-scaffold_60-1510915933:1333223..1333402Clytia hemisphaericaexon
TCONS_00071421-exon-scaffold_60-1510915933:1331663..1331837TCONS_00071421-exon-scaffold_60-1510915933:1331663..1331837Clytia hemisphaericaexon
TCONS_00071421-exon-scaffold_60-1510915933:1328221..1328314TCONS_00071421-exon-scaffold_60-1510915933:1328221..1328314Clytia hemisphaericaexon
TCONS_00071421-exon-scaffold_60-1510915933:1327738..1327876TCONS_00071421-exon-scaffold_60-1510915933:1327738..1327876Clytia hemisphaericaexon
TCONS_00071421-exon-scaffold_60-1510915933:1322586..1322728TCONS_00071421-exon-scaffold_60-1510915933:1322586..1322728Clytia hemisphaericaexon
TCONS_00071421-exon-scaffold_60-1510915933:1321704..1321772TCONS_00071421-exon-scaffold_60-1510915933:1321704..1321772Clytia hemisphaericaexon
TCONS_00071421-exon-scaffold_60-1510915933:1321019..1321188TCONS_00071421-exon-scaffold_60-1510915933:1321019..1321188Clytia hemisphaericaexon
TCONS_00071421-exon-scaffold_60-1510915933:1320045..1320354TCONS_00071421-exon-scaffold_60-1510915933:1320045..1320354Clytia hemisphaericaexon
TCONS_00071421-exon-scaffold_60-1491911889:1333223..1333402TCONS_00071421-exon-scaffold_60-1491911889:1333223..1333402Clytia hemisphaericaexon
TCONS_00071421-exon-scaffold_60-1491911889:1331663..1331837TCONS_00071421-exon-scaffold_60-1491911889:1331663..1331837Clytia hemisphaericaexon
TCONS_00071421-exon-scaffold_60-1491911889:1328221..1328314TCONS_00071421-exon-scaffold_60-1491911889:1328221..1328314Clytia hemisphaericaexon
TCONS_00071421-exon-scaffold_60-1491911889:1327738..1327876TCONS_00071421-exon-scaffold_60-1491911889:1327738..1327876Clytia hemisphaericaexon
TCONS_00071421-exon-scaffold_60-1491911889:1322586..1322728TCONS_00071421-exon-scaffold_60-1491911889:1322586..1322728Clytia hemisphaericaexon
TCONS_00071421-exon-scaffold_60-1491911889:1321704..1321772TCONS_00071421-exon-scaffold_60-1491911889:1321704..1321772Clytia hemisphaericaexon
TCONS_00071421-exon-scaffold_60-1491911889:1321019..1321188TCONS_00071421-exon-scaffold_60-1491911889:1321019..1321188Clytia hemisphaericaexon
TCONS_00071421-exon-scaffold_60-1491911889:1320045..1320354TCONS_00071421-exon-scaffold_60-1491911889:1320045..1320354Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_60supercontigscaffold_60:1320045..1333402 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.471709	0.451254	1.10054	2.56793	7.97332	5.64108	4.96206	6.36918	1.31121	1.5438	0.246077	1.16142	0.898843	2.40292	0.704476	1.21179	1.71676	1.74913	0.759003	0.610154	1.87223	1.50043	0.592846	0.791457	0.838264	1.72473	0.351267	0.710802	0.276547	0.262051
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR006828ASC_dom
IPR032640AMPK1_CBM
IPR013783Ig-like_fold
IPR014756Ig_E-set
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
[Close]
BLAST of TCONS_00071421 vs. Swiss-Prot (Human)
Match: AAKB2 (5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens GN=PRKAB2 PE=1 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 7.527e-50
Identity = 98/221 (44.34%), Postives = 126/221 (57.01%), Query Frame = 3 
Query:  225 VADEERPVQKKTVPVVFHWEHGGDEVFLSGSFNDWKTKVPMTKSGNEHTAIIELPSGTHEFKYYVDGNWLHDPGQ-TINDHFDGRNNVITVSDSDFDFTKALMTDETDEKKQHTASFDXXXXXXXXXXXXXKRIPHHGGVHISTHNSEXXXXXXXXXX--XXNVILNKETE-QEDPTMLPVPHHVALNHLYALSIKDSVMTLSGTHRYKRKYVTTVLYKPV 875
            + D  +P Q+   P V  W  GG EVF+SGSFN+W TK+P+ KS N+  AI++LP G H++K++VDG W+HDP +  +       NN+I V  SDF+   AL  D  +  +       SS              P   G  +    SE            LL VILNK+T    DP +LP P+HV LNHLYALSIKDSVM LS THRYK+KYVTT+LYKP+
Sbjct:   66 LEDSVKPTQQAR-PTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDGQWVHDPSEPVVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRDLSSSP-------------PGPYGQEMYAFRSEERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALSIKDSVMVLSATHRYKKKYVTTLLYKPI 272
The following BLAST results are available for this feature:
BLAST of TCONS_00071421 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AAKB27.527e-5044.345'-AMP-activated protein kinase subunit beta-2 OS=... [more]
back to top