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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071360 ID=TCONS_00071360|Name=TCONS_00071360|organism=Clytia hemisphaerica|type=transcript|length=1403bp
ttttcccaGTATTCACATTGTTTACAGCTTTTGGAAAAAACTTCTGTGTC
TATGAATTTCCCTCCTGATATTAAAGTCATTACGTCATTTAACGAAGAAT
ATCCTCTTTTGCCACGCGCCATCTCCGCTCACAGTAATATTGGCAAATAA
ATTCCCCATCACGATCTTCAGCACTTTCATGGACAGCTTTACCTGCATTT
GACATTCGGCAACGGCGATTCCTATGGATGTTTTTCGAAATGGTTTCTTC
TTCAGACGAAGCTGGCATACTAAGATCACGTGAAGCCATTGTGTTTTGTT
TAAATACTTATACTGAaacgaaatggaaaaacatAAATAACAAGCATGGT
CCACAAATTTCTGATGGATCAATGTCAATTCTAAATGCTTGATTGTTgtc
attttaattattttcagttcGATTTCGTTAGTTATTATATCCCATACCTC
ATCTTCTGAAAGGATTGGATTGAAACCCCCAACGAACAGGGAATATGGTT
TTGGTTTGCCTGATACACGGTCGTGACCGGTTATTCGGTTTCCGAAGATG
ATGGGACTCGGTTTTCTTGGTCGATTTGAGTTGTTGTCTGGGGGGTCTGG
AGGGTTGAGCTGGATGGTATGGAATTCTATCACGGTCGGTGGTAAGATAT
TGGTcaattttctttatcatttCCTCAACATACTTTTTAAGTTCTCTGTT
TTCATCGTTAACTTTCATTACAGTTTTTGTTAGTTTAGTAATTTGTTTGA
GTAATTCTCTGCTGTTGGAATGTTGTGATTTGTCTGCTAGCTTGATCCAA
TAAGacattttacattcattgatcgAAGGAACGCTTTGGATTTTGAGCCA
TATGATCTTTTTGTGCGCCTTGTCCTTAAATTTAGGGTGTTCTGCTTGCC
AAAGAGTGGATACGGTCTAACTGATACTTTCTTTATCGATTTTTCGTTCT
GTTGAAGAGGCTGCGGTACTTGCGTCTCCTACTTCACCGACTTCTTCTGC
TGCTATCAAATACCGTCGGTTTCGCTCCAACATTTCCTCGTCTGTGTCAC
CTTCCCCGATCTTCCTCTACGCCACAGATGATGTTGCAACTTTTCCGTCC
AGTTGAGATTCCAAACTCGGAGTTCCGTCCTGgtggcagataatttagaa
gAGAAATACATTAAATTGTTGTATAGTTTTAGAACTTCCAAAGGGAGTTG
CAACAATGGCATCACTAGCCTCAATTTTCTTATTCACAAACTTAAGAATT
GCAGGGCTCAGTTCCTCTGGTTGTGTTGATGACGGCTGCTCTTACAATCG
AGGGATTTTATAAGGACCGAAAGAATGCCGAGGATCAGTATGATATGGTT
GTAGCGGTTGTAGGTTTTGCTGCGGTGTACTCtcaggtgccaaataaacg
tgc Run BLAST on NCBI transcript from alignment at scaffold_60:619625..621105- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071360 ID=TCONS_00071360|Name=TCONS_00071360|organism=Clytia hemisphaerica|type=transcript|length=1481bp|location=Sequence derived from alignment at scaffold_60:619625..621105- (Clytia hemisphaerica)
TTTTCCCAGTATTCACATTGTTTACAGCTTTTGGAAAAAACTTCTGTGTC
TATGAATTTCCCTCCTGATATTAAAGTCATTACGTCATTTAACGAAGAAT
ATCCTCTTTTGCCACGCGCCATCTCCGCTCACAGTAATATTGGCAAATAA
ATTCCCCATCACGATCTTCAGCACTTTCATGGACAGCTTTACCTGCATTT
GACATTCGGCAACGGCGNTGGCAAATAAATTCACCATCACGATCTTCAGC
ACTTTCATGGACAGCTTTACCTACGTTTGACATTCGGCAACGGCGATTCC
TATGGATGTTTTTCGAAATGGTTTCTTCTTCAGACGAAGCTGGCATACTA
AGATCACGTGAAGCCATTGTGTTTTGTTTAAATACTTATACTGAAACGAA
ATGGAAAAACATAAATAACAAGCATGGTCCACAAATTTCTGATGGATCAA
TGTCAATTCTAAATGCTTGATTGTTGTCATTTTAATTATTTTCAGTTCGA
TTTCGTTAGTTATTATATCCCATACCTCATCTTCTGAAAGGATTGGATTG
AAACCCCCAACGAACAGGGAATATGGTTTTGGTTTGCCTGATACACGGTC
GTGACCGGTTATTCGGTTTCCGAAGATGATGGGACTCGGTTTTCTTGGTC
GATTTGAGTTGTTGTCTGGGGGGTCTGGAGGGTTGAGCTGGATGGTATGG
AATTCTATCACGGTCGGTGGTAAGATATTGGTCAATTTTCTTTATCATTT
CCTCAACATACTTTTTAAGTTCTCTGTTTTCATCGTTAACTTTCATTACA
GTTTTTGTTAGTTTAGTAATTTGTTTGAGTAATTCTCTGCTGTTGGAATG
TTGTGATTTGTCTGCTAGCTTGATCCAATAAGACATTTTACATTCATTGA
TCGAAGGAACGCTTTGGATTTTGAGCCATATGATCTTTTTGTGCGCCTTG
TCCTTAAATTTAGGGTGTTCTGCTTGCCAAAGAGTGGATACGGTCTAACT
GATACTTTCTTTATCGATTTTTCGTTCTGTTGAAGAGGCTGCGGTACTTG
CGTCTCCTACTTCACCGACTTCTTCTGCTGCTATCAAATACCGTCGGTTT
CGCTCCAACATTTCCTCGTCTGTGTCACCTTCCCCGATCTTCCTCTACGC
CACAGATGATGTTGCAACTTTTCCGTCCAGTTGAGATTCCAAACTCGGAG
TTCCGTCCTGGTGGCAGATAATTTAGAAGAGAAATACATTAAATTGTTGT
ATAGTTTTAGAACTTCCAAAGGGAGTTGCAACAATGGCATCACTAGCCTC
AATTTTCTTATTCACAAACTTAAGAATTGCAGGGCTCAGTTCCTCTGGTT
GTGTTGATGACGGCTGCTCTTACAATCGAGGGATTTTATAAGGACCGAAA
GAATGCCGAGGATCAGTATGATATGGTTGTAGCGGTTGTAGGTTTTGCTG
CGGTGTACTCTCAGGTGCCAAATAAACGTGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00071360-exon-scaffold_60-1575043694:620903..621105 | TCONS_00071360-exon-scaffold_60-1575043694:620903..621105 | Clytia hemisphaerica | exon |
| TCONS_00071360-exon-scaffold_60-1575043694:619625..620824 | TCONS_00071360-exon-scaffold_60-1575043694:619625..620824 | Clytia hemisphaerica | exon |
| TCONS_00071360-exon-scaffold_60-1510915933:620903..621105 | TCONS_00071360-exon-scaffold_60-1510915933:620903..621105 | Clytia hemisphaerica | exon |
| TCONS_00071360-exon-scaffold_60-1510915933:619625..620824 | TCONS_00071360-exon-scaffold_60-1510915933:619625..620824 | Clytia hemisphaerica | exon |
| TCONS_00071360-exon-scaffold_60-1491911889:620903..621105 | TCONS_00071360-exon-scaffold_60-1491911889:620903..621105 | Clytia hemisphaerica | exon |
| TCONS_00071360-exon-scaffold_60-1491911889:619625..620824 | TCONS_00071360-exon-scaffold_60-1491911889:619625..620824 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_60 | supercontig | scaffold_60:619625..621105 - |
Blast
The following BLAST results are available for this feature:
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