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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071358 ID=TCONS_00071358|Name=TCONS_00071358|organism=Clytia hemisphaerica|type=transcript|length=1129bp
ATAAAATGGTTGTGACGACTTTAAAAGCATCACAATTTATGATGGAGAAC
ATTTTGCCTGTTATTTTTGCTATTGGAAGCTTTTGGAATATTCtaattat
tatatattttgtgaaaatcaatgctaaaaaaataaagaaaatgagctCTT
ATCATTTTCTTATCGTTAATTTGGCTATCGCTGACCTTATGACAAGCGGA
GGAGTTGCACTTGTTGCTTATAACTTGAACAACTGGCGATTGGGGAAATT
TGCCTGCTCATTTCTTTTTGACATGTTCATCAAAGTTTGTCCAACCGttt
cttgttttattttggTGTTTATTTCATACATCAGGTACCGTGTCATCGCG
TACCCCTTTGAAAGGAGAATCAATAAGAAGCAATGCAGCTTAGTATGTTT
AGCTATATGGATTGTAGCTATTCTCTTGTATCTATATCTCTTCATCAATC
GTCGACTCGTAAAGGCTGGTAAAGATTTGCATTGTGTTGTTGAGAATAAT
attattaacaaaaaatttatGATCAATCTTGCTATCGGTAGTTTATTAGA
TAGCTTCTTACCTTCGTTCTTGATGTACCGTTTCTATCGCATGATTTCAA
AGAAATTGGAAGCTGATGAAAATTCAAATACATTACAAATACATTATCAG
AGCCGTCAAAGAAATCGAAGAGCCGTGAGAACTATCAAAGCTTTGATCAT
GCTGTACGCAATTGCCGTAATCCCTGGTCGAATCACAGATATATTGCTTA
CTGTCCATTTGTATGTAGTTATAAACAAATTTCTGACCGCAGTCCCATTA
CTGGTGAGCTTTCATCACATTATGTATGTGATTAATTCGTTTTGTATACA
CCTTaataacattttgaattttttcatttacGCAAGGATGATTCCTGGCT
TCCAGACGTTTCTTCTAAGATTATTTACATGTGGGAGTTGCGGTAGTAGC
AATTCAATACACTAGTTTGCAAATTATATTATGAAATTTAATTCAATATC
AGGCAttacaatgccggacaaaaggttgttgacaaatgaaatttcagtga
aaaatgatgagaaatagagcaaaatgactcttcaatgtgtctgaaagggg
atggaagttaagaaaaacacttttgaagt Run BLAST on NCBI transcript from alignment at scaffold_60:615145..616273- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071358 ID=TCONS_00071358|Name=TCONS_00071358|organism=Clytia hemisphaerica|type=transcript|length=1129bp|location=Sequence derived from alignment at scaffold_60:615145..616273- (Clytia hemisphaerica)
ATAAAATGGTTGTGACGACTTTAAAAGCATCACAATTTATGATGGAGAAC
ATTTTGCCTGTTATTTTTGCTATTGGAAGCTTTTGGAATATTCTAATTAT
TATATATTTTGTGAAAATCAATGCTAAAAAAATAAAGAAAATGAGCTCTT
ATCATTTTCTTATCGTTAATTTGGCTATCGCTGACCTTATGACAAGCGGA
GGAGTTGCACTTGTTGCTTATAACTTGAACAACTGGCGATTGGGGAAATT
TGCCTGCTCATTTCTTTTTGACATGTTCATCAAAGTTTGTCCAACCGTTT
CTTGTTTTATTTTGGTGTTTATTTCATACATCAGGTACCGTGTCATCGCG
TACCCCTTTGAAAGGAGAATCAATAAGAAGCAATGCAGCTTAGTATGTTT
AGCTATATGGATTGTAGCTATTCTCTTGTATCTATATCTCTTCATCAATC
GTCGACTCGTAAAGGCTGGTAAAGATTTGCATTGTGTTGTTGAGAATAAT
ATTATTAACAAAAAATTTATGATCAATCTTGCTATCGGTAGTTTATTAGA
TAGCTTCTTACCTTCGTTCTTGATGTACCGTTTCTATCGCATGATTTCAA
AGAAATTGGAAGCTGATGAAAATTCAAATACATTACAAATACATTATCAG
AGCCGTCAAAGAAATCGAAGAGCCGTGAGAACTATCAAAGCTTTGATCAT
GCTGTACGCAATTGCCGTAATCCCTGGTCGAATCACAGATATATTGCTTA
CTGTCCATTTGTATGTAGTTATAAACAAATTTCTGACCGCAGTCCCATTA
CTGGTGAGCTTTCATCACATTATGTATGTGATTAATTCGTTTTGTATACA
CCTTAATAACATTTTGAATTTTTTCATTTACGCAAGGATGATTCCTGGCT
TCCAGACGTTTCTTCTAAGATTATTTACATGTGGGAGTTGCGGTAGTAGC
AATTCAATACACTAGTTTGCAAATTATATTATGAAATTTAATTCAATATC
AGGCATTACAATGCCGGACAAAAGGTTGTTGACAAATGAAATTTCAGTGA
AAAATGATGAGAAATAGAGCAAAATGACTCTTCAATGTGTCTGAAAGGGG
ATGGAAGTTAAGAAAAACACTTTTGAAGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00071358-exon-scaffold_60-1575043694:615145..616273 | TCONS_00071358-exon-scaffold_60-1575043694:615145..616273 | Clytia hemisphaerica | exon |
| TCONS_00071358-exon-scaffold_60-1510915933:615145..616273 | TCONS_00071358-exon-scaffold_60-1510915933:615145..616273 | Clytia hemisphaerica | exon |
| TCONS_00071358-exon-scaffold_60-1491911889:615145..616273 | TCONS_00071358-exon-scaffold_60-1491911889:615145..616273 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_60 | supercontig | scaffold_60:615145..616273 - |
Blast
The following BLAST results are available for this feature:
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