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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071356 ID=TCONS_00071356|Name=TCONS_00071356|organism=Clytia hemisphaerica|type=transcript|length=1352bp
GGAAAGTGCCTTACCCGAAACAGTCGGGTCTGATTTGATGACAGTACTAT
AAACATAACATAATGGTCGTACGAGGTCTGCTATTATAGTATTACAAGTC
GTAGATAATTATAATGTAAGCTTGTGCGAACCGACTTTACGTACCATCAA
GTGTTATTTATTTTCAAGTCAGCACACATTCTAGAAGTTGCTTTTTGATT
GCACCTGTTTGCCCTCATCCTTCACAATGTCCGAAGTTGATATCAAGAAA
AGGCATCGTGGTATTCCAGAAGCAacatttttgGAGGATGTTGAGGAATT
CATGAAGAAAGAGGAAAGCTTTGAAAGTGCTCTCCGAAAACTGGACGAAC
AATACCAAAAGTATAAATTCATGGAATCCAATTTGGTACAAAAAAAAGTC
AGGTTGAATGGACAAATACCAGACATTAAGTCTACTTTAAATTCTATCAA
ATGtctcaaaagtaaaaaaGATTCTGACAAATCACTCAGCACGCAATTCA
TGTTATCAGATCAATTGTACGTGAACGCAAAAGTGCCGGTTACCAAGAAA
GTTTGTCTCTGGCTTGGTGCAAACGTCATGTTAGAATATGATATCGAGGA
CGCTGAAAAGTTGCTACAGAAAAATCTGACGACTGCAGAGACGAACCTAG
AGGAGTTATCCGACGATTTATGTTTCTTGCGCGATCAAATTACGACGACG
GAAGTTAGCATGGCTCgtgtttataattttgatgtCAAAAAGCGTCAACA
ACAAAAAGCAGTTGCTGCTACTACTTGAGATCATACTCACACGGGACTTT
CGACCAATATTTAgttactttttttattatattactattattatagaatt
ttatttacatttttgcaatattttctattctcaaattcgaaaaatattga
aattcagtGTATATAATTTAAATAAATTCCTCTCCCATCGTTCTTACCTT
GCTGGAGCATTCCATGGTTAGAAAGAAAATGAGAGACTCTGTGACACTAT
CATTTGAATTAGCGTAAGAATGCCTGGCAGTATTCTAATtgcaaaaattc
tcaaatttttttatgaatagaccATTTCATAAactacgtcacgaacatca
cttgcctcgttttaaaattattgccatggtgattaactcccagtggattt
tattacaaccactttctattcataaaaaaatcatttaatatcTCAAAGGT
CTATCTGAATGGAAATCGTAGAAAATGGAGTTTTGCAATTTATTCTGACA
CCATCAAAATATTGCAACAAAACATTGAAGTACTTCTTGTGGTATTGACC
ATCGGGGTGACGAAGCACTCGTTTTTCTACCTAGTTTCAACCTGGCAAGC
AT Run BLAST on NCBI protein sequence of TCONS_00071356-protein >TCONS_00071356-protein ID=TCONS_00071356-protein|Name=TCONS_00071356-protein|organism=Clytia hemisphaerica|type=polypeptide|length=183bp
MSEVDIKKRHRGIPEATFLEDVEEFMKKEESFESALRKLDEQYQKYKFME
SNLVQKKVRLNGQIPDIKSTLNSIKCLKSKKDSDKSLSTQFMLSDQLYVN
AKVPVTKKVCLWLGANVMLEYDIEDAEKLLQKNLTTAETNLEELSDDLCF
LRDQITTTEVSMARVYNFDVKKRQQQKAVAATT Run BLAST on NCBI transcript from alignment at scaffold_60:533356..545030- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071356 ID=TCONS_00071356|Name=TCONS_00071356|organism=Clytia hemisphaerica|type=transcript|length=11675bp|location=Sequence derived from alignment at scaffold_60:533356..545030- (Clytia hemisphaerica)
GGAAAGTGCCTTACCCGAAACAGTCGGGTCTGATTTGATGACAGTACTAT
AAACATAACATAATGGTCGTACGAGGTCTGCTATTATAGTATTACAAGTC
GTAGATAATTATAATGTAAGCTTGTGCGAACCGACTTTACGTACCATCAA
GTGTTATTTATTTTCAAGTCAGCACACATTCTAGAAGTTGCTTTTTGATT
GCACCTGTTTGCCCTCATCCTTCACAATGTCCGAAGTTGATATCAAGAAA
AGGCATCGTGGTATTCCAGAAGCAACATTTTTGGTAATTTTCTGTTTTTT
TCCTACCCGGGGCCGGGTGCGGGTGGTGCGGGTTGTTTGAATCAAAGTGG
TGCATTTTTCTGCAATTTGTATTATACTTCTGGTCTATTTCTCAAGGATT
ATTGTAAATTAGGATACCTGTGGCAGTCTCTCCTACTTAGGAGAGTATCT
TAAATTCAGCGAAGTCAAGTTTGAAGAGGACCCTGCCTCCCGGCGCTCCG
GAAACATCCGGAGCTTAAAGTGCCGTTTTTTTCGTGCTCCGAAACACTGG
AAGATTCCGGAGCACGATTTTAGCAACTCCAGAAGATTTTTCAAATTTTA
ATTTTTTTTTCAAAACCTATCCTATCTTGTAGAGCTTTGAAAAAGAAAGA
AAATGAGGGGTCGCACTACTCGTCGGGATTTTTTGCGCGGAACGAGGAAG
AATTTACAAAAATGAACTTCAATGCATTAGTACTTACCTTTAAATCATCC
AAATCTGTTCATTCTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNTCTTTTTTTAAATCAATCAGGAA
TTATCAGGGAAACAAGTAAAAAAAACTGCATCCAGGTATCTATTTTCTTT
CCAAAGATATTCATGTTTTTCGACGTCAATTAGTAGGGTGCGCACTCGTC
GGGATTTTTTGCACGGAATGAGGGAGAATTTACAAAAATGAACTTCAATG
CATTGGTACTTACCTTTAAATCATCCAAATCTATTCATTCTTTTTTTAAA
TCAATCAGGAATTATCAGGGAAACAAGTAAAAAAAACTGTATCCAGGTAT
CTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNAAATCGAAATTTCTTCTTTTTTCTT
GATTTAAAGACGGCCCGTAGATTATCGAAAAGGCTACCACGTGACAAACT
AAAGTACTATCTTTCCCGCATTTTATAAAAAAACCGCGAGTCTATATAAC
TAATCCAGCTCAATAGCGATAGCCATTTGAAAAATGGTGGTCAAGGTAGA
CGGTGGTGCCACGAATTCCGAGTCGCCATTTTTTCACCTTGATGTTTAAT
AACACAAGTTGAAGTTGATAAGTTATGATGGATGGAATGTTGTAATTTTG
ATTTTCGACTTTTTCCACACAAAAAATCCCGACGAGTGCGCATCCTACTC
CAGAGGATAAGTGGTTGTACATATATTCAAATTTTAGTGTCAAAAATTTG
ACTAAAAATGTCAAAAAAAAGGTTAGGAAAATAGCTTGGAAAAATTCGAA
AAATGTGTCAAAAAAGAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNTTTTTCTAGTGTAGCTAGAGACCTGAAATTTGGAGGGAGAATTCT
TTGATGGTGTTAGAATATTATTATATAAAAATATTTAGTATATTTATCAA
AATAATGCAAGATATATCCTTTTTGAAAAAAGAAGACATTGCATTGTTTT
ATTTTTGTTTTTGAAGAAAATTAGCTTGGAAAAGGTTGAAATGAGTCAAA
AAAGGTGGTAGGACCCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCTTCAAATACATTTTCCTC
CGTTTCCAGACACATTTGTTCATCGATAGTTGGAAATTTTTTTTCTCCCG
TCGGCAAACAATTTTCAAAATGTTGCAAATGGTTTGGCATTTTACTAATT
TGCCATCTAGCCCGTGTCCACAGTGTTATATACCACTGGAAAGCTAAGAT
CACGGGCTTTCATTTAGTAAAAACCGGAACGCTTTAGCATACATAGAAAA
AAAGTTCGAAGGGTTCAAAGTTCACAGAAAAATGAAACATTTGCGCGGGT
GAAAAATTTAATCTGTCAATCAATTTCTCAAGTGAAGAGTACACAAAGCA
ATTGTAGCTTTACGATGGTGCTGCTGATCATCAGTGGATAGTATCAATTA
TCATCATCCTTTTATTTTCATTTCTAGAACTTTTGAAAAAAAAAGGAAAA
ATAGAAAAGTTGTATTTTTTACTGCTCTATCAACATATAAACTGAATTCT
CTAGATCTATTTTGCGTTTGTTTGCAAACTGCAAAAAAGCGGGACTTTAG
CTTAAGTGCTTGCGTGCAGCATAGGGTACAAAGTGCAATTGCCTTTCCCG
TAATTTTTGTATGAAGAGTTAGGTCTATACTGTCATTTGTGTTTTTTATC
TTATAATATAGTATGGTCTCTAGTTTGTACAATATTAAATAGCCGATTCT
TAGATAATAAGGATCTTCTGGGATGAATCTGTGGTGCAGTGGTTAGGGCG
TTAGGTTCCTAATCAGCGGAACTTTGCATGAATCCCATCGGTGGCAATCT
TTTGGTAAGTCATTCTTGAAATCAGTTGAAAACTATGAAAAAACTCACAA
AGTCCAAGAAAGTCAGAAAAACTACGAACAAGAGACTGGAAAGTACGAAA
TAAGTCCAGATGTGTCTTTCGTCTTCTTTAAGAAGAAGTCATGACCATTT
GTGATTGAGGGCTGCCTGATTAGTAGGTCAGTCAAAATTTCAAACTCATT
TGCAAAATGTCAAACCAAGTTTAATGAAACGCCCTTATCCTCAGAAAAAA
ATGAGGGGTCACTTATCTTTCAACCATTAGTAGTTTTTCAAATAGTATTC
CAGATCCCAATCAAAAATAAACCCCTGTTTTGTGACATTATCTCGAGGAA
ATCAATGAGGTGAATTTTGCGAGTCTGTAGTTTTTTCCGTGTTTAAGTCT
AAACAGAGCTTTACGCCGAAAATACATTCGAATTTTCAAATNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNTTGTTTATACGTTTAAATTTGAGCTCAATACTCTTC
ATTATGAAAATCGCAAAATTTGATAAATTTTACAGACCAGAAAATTCACC
TCATTGACACACTCGAGATTACTGTCAGCCACTAAATTGACCATAACTTG
GGAAAATTATGTGGCTTACACTTAGGATTGCTTTAATGGTTAAGCTGAGG
AAATTAGCTATCCCTTGCATAAAGGGCGAATTTTTGTGGCTTACTTAAAG
GGGAGTTACTAGCTGGGAGACCCGTCTACTCTGTTTGTGTGGTTTTGAAG
TATAACATTCAGTTAAAACGAATAATAATAATATAGAAACAACAGAGTAG
CCGGGTATTTTTGTAGATGCTAAATCTGGTCGCAGAATTCTATTGGCTGT
TAAACAATTGTTGAAATCAGGTGATATCATTGTTTTGATTGGAAGTGCAC
GAATCTGATTGGCTAACCTTATCAACGGCTTTTTTTGGCACTAAATTCAA
ACCAAATGTAAACAAATTCAAACTAGGTCAAAAATACCATTCTCTCAATG
AATAGCTTCTGATGGGATTCTTACTTAAAAATGTGGTGTAAGTTTGAATA
GAGAGTATGGATCTCCAGACTAGTCAGTTACATGCAAATGAAGTGTGGGC
AAAAAATGTGGCTTACTGGTCATGTGGCTTACCCTACCAAGAAATTTTGA
AGGCTGAGTTTTCAATAATGGAAACAGTCAGAAATAGACTTTATTTTCAG
CATTGACAGTAAAGGGGGTCACCACACCATTAACTTTCCCTTAGCGCTTT
CCACCCAAAACTATTTTATTAAAGTTTTTTTAGATTTGGAAAGAAAAACA
TTATTCGTTCCGTGAAAAAAATAATGAAATTTTAGCTTGTGTTCACAAAT
TTTAGACTCTGCACAGCAGATTATTAAGGATGTTAATATTTTCAAGGAAC
ACACCAGAGAGATTACTTGAAATTTTGGCCAACGGTGCAAATCTTGATGA
AGAAAAAGTTTCTCTAGTTTTCTGAACGTGGATCGAAGCAATATCTGAAA
TAATTTAGGTCAAAGTGTCTCCTTTCCTATTTAGCATACATGGTCATGAA
TCTCCTAATTTGGATACTACTCTCCTAATTAGGAGATATCCTAATTAGCA
ATAATCCGTGACTGCCTAACTCTGTCTGGTTTTGGATTTTGACATACAGG
ACATTTTATGACATTTTTGATGATTTTGCGAAGTTAGTATCACATGTTTT
AAGAGTCTTAAGAGTCTTAAAACATGTGATACTAACTTCGCAAAATCATC
AAAAATGTCATAAAATGTCCTGTATGTCAAAATCCAAAACCAGACAGAGT
TAGGCAGTTCATGGAAAAGTGTTGAACTAGGTAAAATTGATGTCAGATCT
GCGGGCGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGCTCATATGGTC
TGACTAACAGCATGTGTTACCCTTAAGAGTAGGTTTTTCAAGACCCTCGA
AATGCACTATAAGGGTCTTCTTTTAACTGGATACAATGTAAGGGTGTGTT
TGGGGTTGCTGAATCACAAGTAGTCTGACCGTGACAATCTGATGTATTTT
TACGGTTTTGACTTGCACTCATTTTGATTTGTTTTGCACATTGTGTTGAC
ATCTCAGGCTCATTTTTGGGTGGCTTCAGAAAAATAAAATGAAGGATCAA
ACTGCACTGTAAGGATGAGAAACGTTCGGTAAAATGCACTGTAAGGGTAG
CCTAGAAATCTAAGCCAGATTGATTCAGTCACTTAGTAAAATCTGATGGT
AAGTTGTGACTGAATATCTAGCTGGGAGACCCGACTTCTCTGTCTATGTG
GTTTCAAAAAAATATCAAAGTATACTATAGACAGTAGTAGCCGGGAATTA
TACAAGATGCAAGAATTAATCGCAGAATTTGATTGGCTAATATCTTATTG
TTATGATTTGATAAACAAAAGTATGACGTCAAACAGCTCTATTGTTTCAA
GAAGTGGCGCGAGCTTTTGAATTGTTTTAAAAAAATAATGGTTTTTTCTT
TTGTGATTTGAAGTGATTTGAATCGAGTCAATAATTCCATACTCTGTATT
TCAGTGAAGTTGTTGGGATTTTAACAGGATAGAAATATNNATATCTGGCT
TAGTACAAGTAAACTTGGTTTCTTATCAACTGACAAAAACGAAATTTCAA
ATTTTCCCGGGCACGTTTTTGTAAATGCACATAAATTTGTATAATTTGTT
CAACACATATTTTTCAACAAAAGATTTCCCATAACTCATTCGCATAAAAA
ACAAGGAATTTGTTAAATAAATACACCCTCCTCCCTAATTACTTAACTTC
TCTTTCATTCAGTTATATAAAGGTTTTTCAAATTAAAAGAGGGAGAGAGA
AAAACATATCTTTCTTTTTATGCAAAAAGTACAGAATAAAATATGTTCAA
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTAT
GGCCAATTAGAAGAGGCCAAATGCTCGCCGAGTCTCACCGACTTCTGCGT
TCAAAATATGAACGCGCGCTTTGCCCAAGCCAGTTTTTCGAGGCAAACTT
AAAATTCCGTACATCATAAAAATCATTAAAGCACCGATAACGCTATATTG
TCTTCAGCCGTATCTTGGCCTTGTAAAAACTAGCTTGGTTAACCAGGCTA
CTGTAAGGGTACCTTTTCATTGCTTAAGATCTGTCCTGTAAGAGTCTAAT
TTTTGAAAACCAATTTTTTGGCGGCACATGCAGTCTTTTAGAAATCCAGT
GCCGTACCTTTAAAAACAAACCCTTTTCAATCACAAGCCAGTAGTTATCC
CGTGAAAAATATATAGCAAAAGAATTCCAAAAGTAAGAAGAATCTTTGTA
CAGATTAATGGGAATCTTAAAACAACAGTATGTTATGGTTGTTTAAAAGA
AAATCTTAAGGCCCTAGAAAAGCAACAGCATCGTGTTTTTCACTGATTGG
ATTTAAATGTGCAAAACTGTCTCAAACGTGACACCCATGTTTTCATGTCT
CAAACAATGCCTTGTTAATCTATTAGCCACTACTTCTACATTTTGGTTCT
TTATAACCAAAGCAGCTTGGTCAAATTTGTTTGTTGTGCTATATATTGAT
ATCCTCCACCACTTCCCATAGTAATCTATGTATTTTTATTTAAAGCTTTT
TTGTATAAGCTTCAACATTCTAGACCAGAACATTCCAAAAATGCCTCTTA
TTCTGTTTGATTATTCTTTAATTCCAGCGATTTTCCTAGAAAAATCTTTC
CAACTATATTTCCTTTCTTGATCCCATAGGAGGATGTTGAGGAATTCATG
AAGAAAGAGGAAAGCTTTGAAAGTGCTCTCCGAAAACTGGACGAACAATA
CCAAAAGTATAAATTCATGGAATCCAATTTGGTACAAAAAAAAGTCAGGT
ACGAAAATTGTATATATTGTACCTATGTAGTAATTCATAGAAATAATTGA
AAAGGTGTATACAGTGAACTTTAGTGAGGGCTAACCAGGGCTTACTTATT
TTAATTTGGTGTTTTAACTTTTTCTTTGTAATTCTTTTAAGAACTGACCC
ATTATTTTTTATTTGATGATTTATTTCAGTTGTAAGAGCCATTAAAAGAG
CGAAATAGACGTTTTCATAAATTACGTCACGAACATCACTTGCCTCATAT
TCAAACAATTTCTATGGTGATCATATCTTTTGAGACATCATATGATTTTT
TATGAATAGAAAGTAGTTGTAATAAAATCCGCTGGGAGTTAATCACTGTG
GCAATAATTTCAAAACGAGGCAAGTGATGTTCGTGACGTAATTTATGAAA
AGGTCTATTGTACCTTTTTTTTTAATTGAAAATCTTACAGTTTCAAAATT
TAATGAAATTCTGCAAGACCTTTATACTTCAGAGAGGTTCATTAACAATC
AATTTACTTTTCAGCAAGGAAGGTTGTTACTTGAGATTAACTACTGTAAT
AGTGAATAATTCAGTTTAGTGCATTACCTTCTTTTTTTAGGTTGAATGGA
CAAATACCAGACATTAAGTCTACTTTAAATTCTATCAAATGTCTCAAAAG
TAAAAAAGTAAGTATTTAAATTGTTCTTCATCATTCAAGAATACAGTCTC
CTATCAAATATATTGTGGGAGATGAAGTGAATTTTTTCCCAAGGGATTTG
CACTGAGTACTGAGTGTGATAATTGCCTACTCACTACCTTCTTTCTTTTG
AGCACTTTACTGACTTGTTTAAAAACCACACTAAAATCGCATTATCAAAA
TATAAAACATGTTGTAAATTTGGGAAATTGTTCTTGGACAGTGCAAAACT
ACAAAAATAATTACCTAATCTAGACTAAAAAACAAGGCTTAACATCCTTC
TCCTTCAAAGCGCATCCCTTTGTTAATGAATTTCCAGCCCCAATCCACAT
TTTCAATTTCTCGGTAGATGTTATTTGAAAAGAAAGGGCCCCAAGAAAGG
GAGTGCTAGAACTATGAAATGATGTTAGACAGAATCAAAATACGCACATA
CTTTTTCTTCGAATGATAAAACTGTTTTAACAATATAATGTGATAATTAC
ACGATACTTTATTAATTGATATTTAATTTCTACTTCCATTAGGATTCTGA
CAAATCACTCAGCACGCAATTCATGTTATCAGATCAATTGTACGTGAACG
CAAAAGTGCCGGTTACCAAGAAAGTTTGTCTCTGGCTTGGTGCAAACGTC
ATGTTAGAATATGATATCGAGGACGCTGAAAAGTTGCTACAGAAAAATCT
GACGACTGCAGAGACGAACCTAGAGGAGTTATCCGACGATTTATGTTTCT
TGCGCGATCAAATTACGACGACGGAAGTTAGCATGGCTCGTGTTTATAAT
TTTGATGTCAAAAAGCGTCAACAACAAAAAGCAGTTGCTGCTACTACTTG
AGATCATACTCACACGGGACTTTCGACCAATATTTAGTTACTTTTTTTAT
TATATTACTATTATTATAGAATTTTATTTACATTTTTGCAATATTTTCTA
TTCTCAAATTCGAAAAATATTGAAATTCAGTGTATATAATTTAAATAAAT
TCCTCTCCCATCGTTCTTACCTTGCTGGAGCATTCCATGGTTAGAAAGAA
AATGAGAGACTCTGTGACACTATCATTTGAATTAGCGTAAGAATGCCTGG
CAGTATTCTAATTGCAAAAATTCTCAAATTTTTTTATGAATAGACCATTT
CATAAACTACGTCACGAACATCACTTGCCTCGTTTTAAAATTATTGCCAT
GGTGATTAACTCCCAGTGGATTTTATTACAACCACTTTCTATTCATAAAA
AAATCATTTAATATCTCAAAGGTCTATCTGAATGGAAATCGTAGAAAATG
GAGTTTTGCAATTTATTCTGACACCATCAAAATATTGCAACAAAACATTG
AAGTACTTCTTGTGGTATTGACCATCGGGGTGACGAAGCACTCGTTTTTC
TACCTAGTTTCAACCTGGCAAGCAT Coding sequence (CDS) from alignment at scaffold_60:533356..545030- >TCONS_00071356 ID=TCONS_00071356|Name=TCONS_00071356|organism=Clytia hemisphaerica|type=CDS|length=2208bp|location=Sequence derived from alignment at scaffold_60:533356..545030- (Clytia hemisphaerica)
GATTCTGACAAATCACTCAGCACGCAATTCATGTTATCAGATCAATTGTA
CGTGAACGCAAAAGTGCCGGTTACCAAGAAAGTTTGTCTCTGGCTTGGTG
CAAACGTCATGTTAGAATATGATATCGAGGACGCTGAAAAGTTGCTACAG
AAAAATCTGACGACTGCAGAGACGAACCTAGAGGAGTTATCCGACGATTT
ATGTTTCTTGCGCGATCAAATTACGACGACGGAAGTTAGCATGGCTCGTG
TTTATAATTTTGATGTCAAAAAGCGTCAACAACAAAAAGCAGTTGCTGCT
ACTACTTGAGTTGAATGGACAAATACCAGACATTAAGTCTACTTTAAATT
CTATCAAATGTCTCAAAAGTAAAAAAGAGGATGTTGAGGAATTCATGAAG
AAAGAGGAAAGCTTTGAAAGTGCTCTCCGAAAACTGGACGAACAATACCA
AAAGTATAAATTCATGGAATCCAATTTGGTACAAAAAAAAGTCAGATGTC
CGAAGTTGATATCAAGAAAAGGCATCGTGGTATTCCAGAAGCAACATTTT
TGGATTCTGACAAATCACTCAGCACGCAATTCATGTTATCAGATCAATTG
TACGTGAACGCAAAAGTGCCGGTTACCAAGAAAGTTTGTCTCTGGCTTGG
TGCAAACGTCATGTTAGAATATGATATCGAGGACGCTGAAAAGTTGCTAC
AGAAAAATCTGACGACTGCAGAGACGAACCTAGAGGAGTTATCCGACGAT
TTATGTTTCTTGCGCGATCAAATTACGACGACGGAAGTTAGCATGGCTCG
TGTTTATAATTTTGATGTCAAAAAGCGTCAACAACAAAAAGCAGTTGCTG
CTACTACTTGAGTTGAATGGACAAATACCAGACATTAAGTCTACTTTAAA
TTCTATCAAATGTCTCAAAAGTAAAAAAGAGGATGTTGAGGAATTCATGA
AGAAAGAGGAAAGCTTTGAAAGTGCTCTCCGAAAACTGGACGAACAATAC
CAAAAGTATAAATTCATGGAATCCAATTTGGTACAAAAAAAAGTCAGATG
TCCGAAGTTGATATCAAGAAAAGGCATCGTGGTATTCCAGAAGCAACATT
TTTGGATTCTGACAAATCACTCAGCACGCAATTCATGTTATCAGATCAAT
TGTACGTGAACGCAAAAGTGCCGGTTACCAAGAAAGTTTGTCTCTGGCTT
GGTGCAAACGTCATGTTAGAATATGATATCGAGGACGCTGAAAAGTTGCT
ACAGAAAAATCTGACGACTGCAGAGACGAACCTAGAGGAGTTATCCGACG
ATTTATGTTTCTTGCGCGATCAAATTACGACGACGGAAGTTAGCATGGCT
CGTGTTTATAATTTTGATGTCAAAAAGCGTCAACAACAAAAAGCAGTTGC
TGCTACTACTTGAGTTGAATGGACAAATACCAGACATTAAGTCTACTTTA
AATTCTATCAAATGTCTCAAAAGTAAAAAAGAGGATGTTGAGGAATTCAT
GAAGAAAGAGGAAAGCTTTGAAAGTGCTCTCCGAAAACTGGACGAACAAT
ACCAAAAGTATAAATTCATGGAATCCAATTTGGTACAAAAAAAAGTCAGA
TGTCCGAAGTTGATATCAAGAAAAGGCATCGTGGTATTCCAGAAGCAACA
TTTTTGGATTCTGACAAATCACTCAGCACGCAATTCATGTTATCAGATCA
ATTGTACGTGAACGCAAAAGTGCCGGTTACCAAGAAAGTTTGTCTCTGGC
TTGGTGCAAACGTCATGTTAGAATATGATATCGAGGACGCTGAAAAGTTG
CTACAGAAAAATCTGACGACTGCAGAGACGAACCTAGAGGAGTTATCCGA
CGATTTATGTTTCTTGCGCGATCAAATTACGACGACGGAAGTTAGCATGG
CTCGTGTTTATAATTTTGATGTCAAAAAGCGTCAACAACAAAAAGCAGTT
GCTGCTACTACTTGAGTTGAATGGACAAATACCAGACATTAAGTCTACTT
TAAATTCTATCAAATGTCTCAAAAGTAAAAAAGAGGATGTTGAGGAATTC
ATGAAGAAAGAGGAAAGCTTTGAAAGTGCTCTCCGAAAACTGGACGAACA
ATACCAAAAGTATAAATTCATGGAATCCAATTTGGTACAAAAAAAAGTCA
GATGTCCGAAGTTGATATCAAGAAAAGGCATCGTGGTATTCCAGAAGCAA
CATTTTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00071356-exon-scaffold_60-1575043694:544748..545030 | TCONS_00071356-exon-scaffold_60-1575043694:544748..545030 | Clytia hemisphaerica | exon |
| TCONS_00071356-exon-scaffold_60-1575043694:535433..535551 | TCONS_00071356-exon-scaffold_60-1575043694:535433..535551 | Clytia hemisphaerica | exon |
| TCONS_00071356-exon-scaffold_60-1575043694:534774..534840 | TCONS_00071356-exon-scaffold_60-1575043694:534774..534840 | Clytia hemisphaerica | exon |
| TCONS_00071356-exon-scaffold_60-1575043694:533356..534238 | TCONS_00071356-exon-scaffold_60-1575043694:533356..534238 | Clytia hemisphaerica | exon |
| TCONS_00071356-exon-scaffold_60-1510915933:544748..545030 | TCONS_00071356-exon-scaffold_60-1510915933:544748..545030 | Clytia hemisphaerica | exon |
| TCONS_00071356-exon-scaffold_60-1510915933:535433..535551 | TCONS_00071356-exon-scaffold_60-1510915933:535433..535551 | Clytia hemisphaerica | exon |
| TCONS_00071356-exon-scaffold_60-1510915933:534774..534840 | TCONS_00071356-exon-scaffold_60-1510915933:534774..534840 | Clytia hemisphaerica | exon |
| TCONS_00071356-exon-scaffold_60-1510915933:533356..534238 | TCONS_00071356-exon-scaffold_60-1510915933:533356..534238 | Clytia hemisphaerica | exon |
| TCONS_00071356-exon-scaffold_60-1491911889:544748..545030 | TCONS_00071356-exon-scaffold_60-1491911889:544748..545030 | Clytia hemisphaerica | exon |
| TCONS_00071356-exon-scaffold_60-1491911889:535433..535551 | TCONS_00071356-exon-scaffold_60-1491911889:535433..535551 | Clytia hemisphaerica | exon |
| TCONS_00071356-exon-scaffold_60-1491911889:534774..534840 | TCONS_00071356-exon-scaffold_60-1491911889:534774..534840 | Clytia hemisphaerica | exon |
| TCONS_00071356-exon-scaffold_60-1491911889:533356..534238 | TCONS_00071356-exon-scaffold_60-1491911889:533356..534238 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_60 | supercontig | scaffold_60:533356..545030 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016272 | prefoldin complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006457 | protein folding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006457 |
protein folding |
| cellular_component |
GO:0016272 |
prefoldin complex |
Blast
BLAST of TCONS_00071356 vs. Swiss-Prot (Human)
Match: PFD3 (Prefoldin subunit 3 OS=Homo sapiens GN=VBP1 PE=1 SV=3) HSP 1 Score: 194.126 bits (492), Expect = 1.409e-58 Identity = 104/177 (58.76%), Postives = 135/177 (76.27%), Query Frame = 2
Query: 227 MSEVDIKKRHRGIPEATFLEDVXX--XXXXXXXXXXALRKLDEQYQKYKFMESNLVQKKVRLNGQIPDIKSTLNSIKCXXXXXXXXXXXXTQFMLSDQLYVNAKVPVTKKVCLWLGANVMLEYDIEDAEKLLQKNLTTAETNLEELSDDLCFLRDQITTTEVSMARVYNFDVKKRQQ 751
M+ + ++ H GIPEA F+EDV+ E+ ++ L+KLDEQYQKYKFME NL QKK RL GQIP+IK TL +K ++ KK+S S+ T+F+L+D LY A VP T K+CLWLGANVMLEYDI++A+ LL+KNL+TA NL+ L +DL FLRDQ TTTEV+MARVYN+DVK+R +
Sbjct: 13 MATGNGRRLHLGIPEAVFVEDVDSFMKQPGNETADTVLKKLDEQYQKYKFMELNLAQKKRRLKGQIPEIKQTLEILKYMQKKKESTNSMETRFLLADNLYCKASVPPTDKMCLWLGANVMLEYDIDEAQALLEKNLSTATKNLDSLEEDLDFLRDQFTTTEVNMARVYNWDVKRRNK 189
The following BLAST results are available for this feature:
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